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<?release-delay 0|0?>
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">IJO</journal-id>
<journal-title-group>
<journal-title>International Journal of Oncology</journal-title></journal-title-group>
<issn pub-type="ppub">1019-6439</issn>
<issn pub-type="epub">1791-2423</issn>
<publisher>
<publisher-name>D.A. Spandidos</publisher-name></publisher></journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3892/ijo.2017.4204</article-id>
<article-id pub-id-type="publisher-id">ijo-52-01-0067</article-id>
<article-categories>
<subj-group>
<subject>Articles</subject></subj-group></article-categories>
<title-group>
<article-title>Effect of bis(hydroxymethyl) alkanoate curcuminoid derivative MTH-3 on cell cycle arrest, apoptotic and autophagic pathway in triple-negative breast adenocarcinoma MDA-MB-231 cells: An <italic>in vitro</italic> study</article-title></title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Chang</surname><given-names>Ling-Chu</given-names></name><xref rid="af1-ijo-52-01-0067" ref-type="aff">1</xref></contrib>
<contrib contrib-type="author">
<name><surname>Hsieh</surname><given-names>Min-Tsang</given-names></name><xref rid="af1-ijo-52-01-0067" ref-type="aff">1</xref><xref rid="af2-ijo-52-01-0067" ref-type="aff">2</xref></contrib>
<contrib contrib-type="author">
<name><surname>Yang</surname><given-names>Jai-Sing</given-names></name><xref rid="af3-ijo-52-01-0067" ref-type="aff">3</xref></contrib>
<contrib contrib-type="author">
<name><surname>Lu</surname><given-names>Chi-Cheng</given-names></name><xref rid="af6-ijo-52-01-0067" ref-type="aff">6</xref></contrib>
<contrib contrib-type="author">
<name><surname>Tsai</surname><given-names>Fuu-Jen</given-names></name><xref rid="af4-ijo-52-01-0067" ref-type="aff">4</xref><xref rid="af5-ijo-52-01-0067" ref-type="aff">5</xref></contrib>
<contrib contrib-type="author">
<name><surname>Tsao</surname><given-names>Je-Wei</given-names></name><xref rid="af2-ijo-52-01-0067" ref-type="aff">2</xref></contrib>
<contrib contrib-type="author">
<name><surname>Chiu</surname><given-names>Yu-Jen</given-names></name><xref rid="af7-ijo-52-01-0067" ref-type="aff">7</xref></contrib>
<contrib contrib-type="author">
<name><surname>Kuo</surname><given-names>Sheng-Chu</given-names></name><xref rid="af1-ijo-52-01-0067" ref-type="aff">1</xref><xref rid="af2-ijo-52-01-0067" ref-type="aff">2</xref><xref ref-type="corresp" rid="c2-ijo-52-01-0067"/></contrib>
<contrib contrib-type="author">
<name><surname>Lee</surname><given-names>Kuo-Hsiung</given-names></name><xref rid="af1-ijo-52-01-0067" ref-type="aff">1</xref><xref rid="af8-ijo-52-01-0067" ref-type="aff">8</xref><xref ref-type="corresp" rid="c1-ijo-52-01-0067"/></contrib></contrib-group>
<aff id="af1-ijo-52-01-0067">
<label>1</label>Chinese Medicinal Research and Development Center, China Medical University Hospital</aff>
<aff id="af2-ijo-52-01-0067">
<label>2</label>School of Pharmacy, China Medical University</aff>
<aff id="af3-ijo-52-01-0067">
<label>3</label>Department of Medical Research, China Medical University Hospital, China Medical University</aff>
<aff id="af4-ijo-52-01-0067">
<label>4</label>Human Genetic Center, China Medical University Hospital</aff>
<aff id="af5-ijo-52-01-0067">
<label>5</label>School of Chinese Medicine, China Medical University, Taichung 404</aff>
<aff id="af6-ijo-52-01-0067">
<label>6</label>Department of Pharmacy, Buddhist Tzu Chi General Hospital, Hualien 970</aff>
<aff id="af7-ijo-52-01-0067">
<label>7</label>Division of Reconstructive and Plastic Surgery, Department of Surgery, Taipei Veterans General Hospital, Taipei 112, Taiwan, R.O.C.</aff>
<aff id="af8-ijo-52-01-0067">
<label>8</label>Natural Products Research Laboratories, UNC Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC 27599, USA</aff>
<author-notes>
<corresp id="c1-ijo-52-01-0067">Correspondence to: Dr Kuo-Hsiung Lee, Natural Products Research Laboratories, UNC Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC 27599, USA, E-mail: <email>khlee@unc.edu</email></corresp>
<corresp id="c2-ijo-52-01-0067">Dr Sheng-Chu Kuo, School of Pharmacy, China Medical University, 91 Hsueh-Shih Road, Taichung City 40402, Taiwan, R.O.C., E-mail: <email>sckuo@mail.cmu.edu.tw</email></corresp></author-notes>
<pub-date pub-type="collection">
<month>01</month>
<year>2018</year></pub-date>
<pub-date pub-type="epub">
<day>14</day>
<month>11</month>
<year>2017</year></pub-date>
<volume>52</volume>
<issue>1</issue>
<fpage>67</fpage>
<lpage>76</lpage>
<history>
<date date-type="received">
<day>20</day>
<month>06</month>
<year>2017</year></date>
<date date-type="accepted">
<day>29</day>
<month>09</month>
<year>2017</year></date></history>
<permissions>
<copyright-statement>Copyright: &#x000A9; Chang et al.</copyright-statement>
<copyright-year>2018</copyright-year>
<license license-type="open-access">
<license-p>This is an open access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by-nc-nd/4.0/">Creative Commons Attribution-NonCommercial-NoDerivs License</ext-link>, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.</license-p></license></permissions>
<abstract>
<p>Curcumin has been shown to exert potential antitumor activity <italic>in vitro</italic> and <italic>in vivo</italic> involved in multiple signaling pathways. However, the application of curcumin is still limited because of its poor hydrophilicity and low bio-availability. In the present study, we investigated the therapeutic effects of a novel and water soluble bis(hydroxymethyl) alkanoate curcuminoid derivative, MTH-3, on human breast adenocarcinoma MDA-MB-231 cells. This study investigated the effect of MTH-3 on cell viability, cell cycle and induction of autophagy and apoptosis in MDA-MB-231 cells. After 24-h treatment with MTH-3, a concentration-dependent decrease in MDA-MB-231 cell viability was observed, and the IC<sub>50</sub> value was 5.37&#x000B1;1.22 <italic>&#x003BC;</italic>M. MTH-3 significantly triggered G<sub>2</sub>/M phase arrest and apoptosis in MDA-MB-231 cells. Within a 24-h treatment, MTH-3 decreased the CDK1 activity by decreasing CDK1 and cyclin B1 protein levels. MTH-3-induced apoptosis was further confirmed by morphological assessment and Annexin V/PI staining assay. Induction of apoptosis caused by MTH-3 was accompanied by an apparent increase of DR3, DR5 and FADD and, as well as a marked decrease of Bcl-2 and Bcl-xL protein expression. MTH-3 also decreased the protein levels of Ero1, PDI, PERK and calnexin, as well as increased the expression of IRE1&#x003B1;, CHOP and Bip that consequently led to ER stress and MDA-MB-231 cell apoptosis. In addition, MTH-3-treated cells were involved in the autophagic process and cleavage of LC3B was observed. MTH-3 enhanced the protein levels of LC3B, Atg5, Atg7, Atg12, p62 and Beclin-1 in MDA-MB-231 cells. Finally, DNA microarray was carried out to investigate the level changes of gene expression modulated by MTH-3 in MDA-MB-231 cells. Taken together, our results suggest that MTH-3 might be a novel therapeutic agent for the treatment of triple-negative breast cancer in the near future.</p></abstract>
<kwd-group>
<kwd>bis(hydroxymethyl) alkanoate curcuminoid derivative</kwd>
<kwd>MTH-3</kwd>
<kwd>apoptosis</kwd>
<kwd>autophagy</kwd>
<kwd>breast cancer MDA-MB-231 cells</kwd></kwd-group></article-meta></front>
<body>
<sec sec-type="intro">
<title>Introduction</title>
<p>Breast cancer is the second leading cause of death in women and has approximately 1 million new cases per year worldwide (<xref rid="b1-ijo-52-01-0067" ref-type="bibr">1</xref>,<xref rid="b2-ijo-52-01-0067" ref-type="bibr">2</xref>). Breast cancer patients develop metastasis eventually leading to poor prognosis (<xref rid="b3-ijo-52-01-0067" ref-type="bibr">3</xref>). Triple-negative breast cancer (TNBC) accounts for 12&#x02013;20% of all breast cancer (<xref rid="b4-ijo-52-01-0067" ref-type="bibr">4</xref>). It has more aggressive disease progress and worse prognosis (<xref rid="b5-ijo-52-01-0067" ref-type="bibr">5</xref>). TNBC characteristics are the lack of expression of estrogen receptor (ER), progesterone receptor (PR) and the lack of overexpression of HER-2 (<xref rid="b4-ijo-52-01-0067" ref-type="bibr">4</xref>,<xref rid="b6-ijo-52-01-0067" ref-type="bibr">6</xref>). TNBC is resistance to anti-hormone therapies and HER-2-aiming target therapies (<xref rid="b7-ijo-52-01-0067" ref-type="bibr">7</xref>,<xref rid="b8-ijo-52-01-0067" ref-type="bibr">8</xref>). Treatment of TNBC remains a great clinical challenge because of the lack of targeting agents and limited therapeutic options (<xref rid="b8-ijo-52-01-0067" ref-type="bibr">8</xref>,<xref rid="b9-ijo-52-01-0067" ref-type="bibr">9</xref>).</p>
<p>Curcumin has been used in traditional Chinese medicine for a long time in Taiwan, China and India (<xref rid="b10-ijo-52-01-0067" ref-type="bibr">10</xref>). The pharmacological effects of curcumin include anti-amyloid (<xref rid="b11-ijo-52-01-0067" ref-type="bibr">11</xref>), anti-bacterial (<xref rid="b12-ijo-52-01-0067" ref-type="bibr">12</xref>), anti-depressant (<xref rid="b13-ijo-52-01-0067" ref-type="bibr">13</xref>), anti-inflammatory (<xref rid="b14-ijo-52-01-0067" ref-type="bibr">14</xref>), anti-oxidant (<xref rid="b15-ijo-52-01-0067" ref-type="bibr">15</xref>), anti-diabetes (<xref rid="b16-ijo-52-01-0067" ref-type="bibr">16</xref>) and anticancer properties (<xref rid="b17-ijo-52-01-0067" ref-type="bibr">17</xref>,<xref rid="b18-ijo-52-01-0067" ref-type="bibr">18</xref>). In addition, curcumin has been found to affect several anticancer signaling pathways such as inhibition of cancer cell proliferation (<xref rid="b19-ijo-52-01-0067" ref-type="bibr">19</xref>,<xref rid="b20-ijo-52-01-0067" ref-type="bibr">20</xref>) and induction of cell cycle arrest (<xref rid="b21-ijo-52-01-0067" ref-type="bibr">21</xref>), apoptosis (<xref rid="b22-ijo-52-01-0067" ref-type="bibr">22</xref>) or autophagy (<xref rid="b23-ijo-52-01-0067" ref-type="bibr">23</xref>). Specifically, the phase II and III clinical trial of curcumin was advocated for use in patients with colon and pancreatic cancers (<xref rid="b24-ijo-52-01-0067" ref-type="bibr">24</xref>,<xref rid="b25-ijo-52-01-0067" ref-type="bibr">25</xref>), but its low water solubility exerts poor bioavailability and primary limiting factors (low efficacy and safety) (<xref rid="b26-ijo-52-01-0067" ref-type="bibr">26</xref>,<xref rid="b27-ijo-52-01-0067" ref-type="bibr">27</xref>). To improve these issues, we designed and developed a novel bis(hydroxymethyl) alkanoate curcuminoid derivative, MTH-3 (<xref rid="f1-ijo-52-01-0067" ref-type="fig">Fig. 1</xref>). In our previous studies, novel bis(hydroxymethyl) alkanoate curcuminoid derivatives were shown to exhibit antitumor effects on triple-negative breast cancer cells and in a xenograft animal experiment (<xref rid="b28-ijo-52-01-0067" ref-type="bibr">28</xref>). The aim of the present study was to characterize the property of MTH-3 and to clarify the molecular mechanism of MTH-3 in human breast adenocarcinoma MDA-MB-231 cells <italic>in vitro</italic>.</p></sec>
<sec sec-type="materials|methods">
<title>Materials and methods</title>
<sec>
<title>Chemicals and reagents</title>
<p>MTH-3 was synthesized as previously described (<xref rid="b28-ijo-52-01-0067" ref-type="bibr">28</xref>) (patent pending). The purity of MTH-3 is 98.7, and its molecular weight is 600.61. Leibovitz's L-15 medium, fetal bovine serum (FBS), penicillin-streptomycin, trypsin-EDTA, Premo Autophagy Sensor LC3B-GFP (BacMam 2.0) and 4&#x02032;,6-diamidino-2-phenylindole (DAPI) were purchased from Thermo Fisher Scientific (Waltham, MA, USA). The antibodies were purchased from Cell Signaling Technology (Danvers, MA, USA). All chemicals were obtained from Sigma-Aldrich (St. Louis, MO, USA) unless otherwise stated.</p></sec>
<sec>
<title>Cell culture</title>
<p>The human breast adenocarcinoma cell line MDA-MB-231 was purchased from the Bioresource Collection and Research Center (BCRC; Hsinchu, Taiwan). Cells were cultured in Leibovitz's L-15 medium with 10% FBS and 1% penicillin-streptomycin (100 Units/ml penicillin and 100 <italic>&#x003BC;</italic>g/ml streptomycin) in an incubator under 95% air and 5% CO<sub>2</sub> at 37&#x000B0;C.</p></sec>
<sec>
<title>Cell viability assay and morphologic changes</title>
<p>Cell viability was evaluated by the reduction in MTT to yield blue formazan. MDA-MB-231 cells (1&#x000D7;10<sup>4</sup> cells/well) in 96-well plates were allowed to attach overnight and then treated with different concentrations (1, 3, 5 and 10 <italic>&#x003BC;</italic>M) of MTH-3 for 24 h. After treatments, MTT solution was added to each well (a final concentration of 0.5 <italic>&#x003BC;</italic>g/ml), and then the plates were incubated for another 4 h. The medium was removed, blue formazan was dissolved in dimethyl sulfoxide (DMSO), and the absorbance was read at 570 nm as previously described (<xref rid="b29-ijo-52-01-0067" ref-type="bibr">29</xref>). For trypan blue exclusion assay, cells were collected after 1, 3, 5 and 10 <italic>&#x003BC;</italic>M of MTH-3 exposure, stained with 0.4% trypan blue and then counted on a hemocytometer under a microscope. For morphological observation, cells were visualized and photographed using a phase-contrast microscope equipped with a digital camera (Leica Microsystems GmbH, Wetzlar, Germany) as in previous reports (<xref rid="b26-ijo-52-01-0067" ref-type="bibr">26</xref>,<xref rid="b30-ijo-52-01-0067" ref-type="bibr">30</xref>).</p></sec>
<sec>
<title>Distribution of cell cycle analysis</title>
<p>MDA-MB-231 cells (2&#x000D7;10<sup>5</sup> cells/well) in 12-well plates were exposed to 10 <italic>&#x003BC;</italic>M MTH-3. After a 24-h treatment, cells were harvested and fixed gently by putting 70% ethanol at 4&#x000B0;C overnight before being stained with PI solution (40 <italic>&#x003BC;</italic>g/ml PI and 0.1 mg/ml RNase and 0.1% Triton X-100) in the dark for 30 min as previously described (<xref rid="b31-ijo-52-01-0067" ref-type="bibr">31</xref>). The cells were analyzed for the cell cycle distribution with a flow cytometer (FACSCalibur; BD Biosciences, San Jose, CA, USA).</p></sec>
<sec>
<title>CDK1 kinase assay</title>
<p>CDK1 kinase activity was analyzed according to the manufacturer's protocol (CycLex Cdc2-Cyclin B Kinase Assay kit; MBL International Corp., Woburn, MA, USA). The ability of CDK1 kinase from MDA-MB-231 cell extracts prepared from each treatment of 10 <italic>&#x003BC;</italic>M MTH-3 for 4, 8, 16 and 24 h was measured as previously described (<xref rid="b32-ijo-52-01-0067" ref-type="bibr">32</xref>,<xref rid="b33-ijo-52-01-0067" ref-type="bibr">33</xref>).</p></sec>
<sec>
<title>Apoptosis analysis</title>
<p>MDA-MB-231 cells (2&#x000D7;10<sup>5</sup> cells/well) into 12-well plates were incubated in the presence and absence of 10 <italic>&#x003BC;</italic>M MTH-3 for 24 and 48 h. Subsequently, cells were harvested and stained with Annexin V and propidium iodide (PI) using the Annexin V-FITC apoptosis detection kit (BD Biosciences, San Diego, CA, USA) and subjected to flow cytometry (BD FACSCalibur; BD Biosciences). The percentage of apoptotic cells were quantified with BD CellQuest Pro software (BD Biosciences) (<xref rid="b34-ijo-52-01-0067" ref-type="bibr">34</xref>,<xref rid="b35-ijo-52-01-0067" ref-type="bibr">35</xref>).</p></sec>
<sec>
<title>Cells lysate preparation and western blot analysis</title>
<p>After 10 <italic>&#x003BC;</italic>M MTH-3 treatments at indicated intervals of time, MDA-MB-231 cells were harvested, washed and suspended in the PRO-PREP Protein Extraction Solution (iNtRON Biotechnology, Gyeonggi-do, Korea). Protein concentrations were estimated using the Protein Assay kit (Bio-Rad Laboratories, Hercules, CA, USA). The samples were resolved with SDS-PAGE and transferred to a polyvinylidene difluo-ride membrane (PVDF) (EMD Millipore, Billerica, MA, USA). Each membrane was blocked in 5% non-fat milk in Tris-buffered saline with 0.1% Tween-20 for 1 h followed by individual incubation with specific primary antibodies &#x0005B;cyclin B1 (cat. no. 4138, 1:1,000), CDK1/Cdc2 (cat. no. 9116, 1:1,000), DR3 (cat. no. 4758, 1:1,000), DR5 (cat. no. 8074, 1:1,000), FADD (cat. no. 2782, 1:1,000), Bcl-2 (cat. no. 4223, 1:1,000), Bcl-xL (cat. no. 2764, 1:1,000), Ero1 (cat. no. 3264, 1:1,000), PDI (cat. no. 3501, 1:1,000), PERK (cat. no. 5683, 1:1,000), calnexin (cat. no. 2679, 1:1,000), IRE1&#x003B1; (cat. no. 3294, 1:1,000), CHOP (cat. no. 2895, 1:1,000), Bip (cat. no. 3177, 1:1,000), Atg5 (cat. no. 12994, 1:1,000), Atg7 (cat. no. 8558, 1:1,000), Atg12 (cat. no. 4180, 1:1,000), Beclin-1 (cat. no. 3495, 1:1,000), p62 (cat. no. 88588, 1:1,000), LC3A/B (cat. no. 12741, 1:1,000) and &#x003B2;-actin (cat. no. 3700, 1:5,000) (Cell Signaling Technology, Danvers, MA, USA)&#x0005D; at 4&#x000B0;C overnight. Each membrane was then incubated with anti-rabbit IgG (cat. no. 7074, 1:10,000) or anti-mouse IgG (cat. no. 7076, 1:10,000) horseradish peroxidase (HRP)-linked antibodies (Cell Signaling Technology) at room temperature for 1 h. The signal was detected with the Immobilon Western Chemiluminescent HRP substrate (EMD Millipore) and visualized using the LAS 4000 imaging system (Fuji, Tokyo, Japan) as previously described (<xref rid="b36-ijo-52-01-0067" ref-type="bibr">36</xref>&#x02013;<xref rid="b38-ijo-52-01-0067" ref-type="bibr">38</xref>). The quantitative densitometric analysis of immunoreactive band was employed by ImageJ bundled with 64-bit Java 1.6.0_24 program for Windows from the National Institutes of Health (NIH; Bethesda, MD, USA).</p></sec>
<sec>
<title>Immunofluorescence staining</title>
<p>MDA-MB-231 cells (2&#x000D7;10<sup>6</sup> cells/dish) were grown on sterile coverslips placed in a 10-cm dish. After 10 <italic>&#x003BC;</italic>M MTH-3 treatment, cells were fixed with 4% paraformaldehyde and permeabilized with 0.2% Triton X-100 in phosphate-buffered saline (PBS). After blocking with 2% bovine serum albumin (BSA) in PBS, LC3B and p62 were detected using anti-LC3B and anti-p62 antibody followed by reaction with FITC- or PE-conjugated secondary antibody (BD Biosciences). Coverslips were mounted on glass slides with ProLong Gold Antifade reagents (Thermo Fisher Scientific) containing DAPI, and fluorescent image was taken on a Leica Microsystems TCS SP2 Confocal Spectral microscope as detailed by Lu <italic>et al</italic> (<xref rid="b39-ijo-52-01-0067" ref-type="bibr">39</xref>).</p></sec>
<sec>
<title>cDNA microarray analysis</title>
<p>MDA-MB-231 cells were incubated with or without 10 <italic>&#x003BC;</italic>M MTH-3 for 24 h. After exposure, cell pellets were collected, and the total RNA from each treatment was purified using the Qiagen RNeasy Mini kit (Qiagen, Valencia, CA, USA). RNA purity was determined to check the quality at 260/280 nm using a NanoDrop 1000 spectrophotometer (Thermo Fisher Scientific). mRNA was amplified and labeled using the GeneChip WT Sense Target Labeling and Control Reagents kit (Affymetrix, Santa Clara, CA, USA) for expression analysis. The synthesized cDNA was labeled with fluorescence and then hybridized for 17 h using GeneChip Human Gene 1.0 ST array (Affymetrix) to determine microarray hybridization following the manufacturer's protocols. The arrays were subsequently washed using GeneChip Fluidics Station 450 (Affymetrix), stained with streptavidin-phycoerythrin (GeneChip Hybridization, Wash and Stain kit; Affymetrix) and scanned on a GeneChip Scanner 3000 (Affymetrix). The localized concentrations of fluorescent molecules were quantitated and analyzed using Expression Console Software (Affymetrix) with default RMA parameters as previously described (<xref rid="b40-ijo-52-01-0067" ref-type="bibr">40</xref>). The gene expression level of a 2.5-fold change (log2 ratio) was considered a difference in MTH-3-treated cells <italic>in vitro</italic> (<xref rid="b41-ijo-52-01-0067" ref-type="bibr">41</xref>,<xref rid="b42-ijo-52-01-0067" ref-type="bibr">42</xref>).</p></sec>
<sec>
<title>Statistical analysis</title>
<p>Data are presented as the mean &#x000B1; SD for three separate experiment. Differences among the groups were considered to be significant at P&lt;0.05 using ANOVA followed by the Duncan's test.</p></sec></sec>
<sec sec-type="results">
<title>Results</title>
<sec>
<title>MTH-3 inhibits cell proliferation of human breast adenocarcinoma MDA-MB-231 cells</title>
<p>At first, the effect of MTH-3 on the viability of MDA-MB-231 cells was investigated using the MTT and trypan blue exclusion assays. MTH-3 at 1, 3, 5 and 10 <italic>&#x003BC;</italic>M significantly reduced the viability of MDA-MB-231 cells by 98.94&#x000B1;2.26, 89.57&#x000B1;2.07, 69.57&#x000B1;4.13 and 59.6&#x000B1;4.04%, respectively (<xref rid="f2-ijo-52-01-0067" ref-type="fig">Fig. 2A</xref>). Importantly, the cell viability reduction after 30 <italic>&#x003BC;</italic>M MTH-3 challenge is 34.23&#x000B1;3.31%. This effect is in a concentration-dependent manner. Data from morphological observation revealed that MTH-3 treatment at 10 <italic>&#x003BC;</italic>M caused obvious MDA-MB-231 cell apoptosis and autophagy with characteristics, including cytoplasmic membrane blebbing, cell shrinkage and autophagic vacuoles (<xref rid="f2-ijo-52-01-0067" ref-type="fig">Fig. 2B</xref>). Based on these findings and gaining effective evidence of cell death, we selected MTH-3 at 10 <italic>&#x003BC;</italic>M for the majority of the experiments in MDA-MB-231 cells.</p></sec>
<sec>
<title>MTH-3 triggers G<sub>2</sub>/M phase arrest and reduces CDK1 activity in MDA-MB-231 cells</title>
<p>To investigate the cell cycle distribution of treated and untreated MDA-MB-231 cells, cells were monitored after 10 <italic>&#x003BC;</italic>M MTH-3 challenge. Results from flow cytometric analysis showed that MTH-3 treatment of MDA-MB-231 cells significantly increased G<sub>2</sub>/M phase cell population at 24 h (<xref rid="f3-ijo-52-01-0067" ref-type="fig">Fig. 3A</xref>). The effects of MTH-3 on G<sub>2</sub>/M phase-related proteins in MDA-MB-231 cells were investigated. Our results showed that MTH-3 effectively down-regulated the levels of cyclin B1 and CDK1 (<xref rid="f3-ijo-52-01-0067" ref-type="fig">Fig. 3B</xref>). We also tested the CDK1 kinase activity in MDA-MB-231 cells prior to MTH-3 treatment. MTH-3 markedly reduced CDK1 kinase activity at 4, 8, 12 and 24 h of treatment, respectively (<xref rid="f3-ijo-52-01-0067" ref-type="fig">Fig. 3C</xref>). Therefore, the finding showed that downregulation of CDK1 activity contributed to G<sub>2</sub>/M phase arrest caused by MTH-3 in MDA-MB-231 cells.</p></sec>
<sec>
<title>MTH-3 elicits cell apoptosis of MDA-MB-231 cells</title>
<p>To further explore whether the inhibition of cell viability results from the induction of apoptosis in MDA-MB-231 cells, MTH-3-treated cells were detected with Annexin V/PI double staining (<xref rid="f4-ijo-52-01-0067" ref-type="fig">Fig. 4</xref>). Treatment with 10 <italic>&#x003BC;</italic>M MTH-3 for 48 h significantly increased the population of Annexin V-positive cells (<xref rid="f4-ijo-52-01-0067" ref-type="fig">Fig. 4</xref>), indicating that MTH-3 induced apoptosis in MDA-MB-231 cells. However, the necrotic cells (Annexin V<sup>+</sup>/PI<sup>+</sup>) increased rapidly after 48 h of 10 <italic>&#x003BC;</italic>M MTH-3 exposure.</p></sec>
<sec>
<title>MTH-3 activates death receptor, mitochondrial and ER stress-mediated apoptotic pathways in MDA-MB-231 cells</title>
<p>The effects of MTH-3 on apoptosis-related proteins in MDA-MB-231 cells were investigated. Our results demonstrated that MTH-3 upregulated the levels of DR5 and FADD, and it downregulated the levels of Bcl-2 and Bcl-xL (<xref rid="f5-ijo-52-01-0067" ref-type="fig">Fig. 5A</xref>). Furthermore, our findings also revealed that MTH-3 markedly increased the levels of CHOP and Bip, as well as decreased the levels of Ero1, PDI, PERK, calnexin and IRE1&#x003B1; (<xref rid="f5-ijo-52-01-0067" ref-type="fig">Fig. 5B</xref>). These results suggest that MTH-3 induced apoptosis through death receptor (extrinsic pathway) and mitochondria (intrinsic pathway)-dependent pathways and possibly by modulating ER stress mechanism in MDA-MB-231 cells.</p></sec>
<sec>
<title>MTH-3 stimulates autophagy in MDA-MB-231 cells</title>
<p>To confirm if autophagy is involved in the inhibition of MDA-MB-231 cell viability, cells with or without MTH-3 exposure were detected with LC3B and p62 double immunostaining. MTH-3 at 10 <italic>&#x003BC;</italic>M increased the LC3B (FITC; green color) and p62 (PE; red color) protein expression (<xref rid="f6-ijo-52-01-0067" ref-type="fig">Fig. 6</xref>), indicating that MTH-3 induced autophagy through increasing LC3B/p62 signaling in MDA-MB-231 cells.</p></sec>
<sec>
<title>MTH-3 alters the levels of autophagy-associated proteins in MDA-MB-231 cells</title>
<p>Based on the results of autophagy, its related signals were further employed by immunoblotting analysis. MTH-3 treatment induced the levels of Atg5, Atg7, Atg12, Beclin-1, p62 and LC3B in a time-dependent manner (<xref rid="f7-ijo-52-01-0067" ref-type="fig">Fig. 7</xref>). These data demonstrated that MTH-3 induced autophagy by activating Atg family proteins in MDA-MB-231 cells.</p></sec>
<sec>
<title>MTH-3 modulates cell death-related gene expression in MDA-MB-231 cells by cDNA microarray analysis</title>
<p>After treatment with 10 <italic>&#x003BC;</italic>M MTH-3 for 24 h, cells were collected, and cDNA microarray analysis was performed. The analysis showed that 97 genes (69 genes, upregulated; 28 genes, down-regulated) were expressed at least by 2.5-fold compared with the untreated control (<xref rid="tI-ijo-52-01-0067" ref-type="table">Table I</xref>). The top alteration in gene expression scored by the number of pathway networks from GeneGo analysis program (<xref rid="f8-ijo-52-01-0067" ref-type="fig">Fig. 8</xref>). These genes may also be involved in cell death and cytotoxic responses in MTH-3-treated MDA-MB-231 cells.</p></sec></sec>
<sec sec-type="discussion">
<title>Discussion</title>
<p>Previous studies have demonstrated the anticancer potential of curcumin in regulating cell cycle, autophagy, apoptosis and survival, proliferation, angiogenesis, invasion and metastasis (<xref rid="b19-ijo-52-01-0067" ref-type="bibr">19</xref>&#x02013;<xref rid="b23-ijo-52-01-0067" ref-type="bibr">23</xref>). Guan <italic>et al</italic> (<xref rid="b43-ijo-52-01-0067" ref-type="bibr">43</xref>) demonstrated that curcumin reduced Akt kinase in MDA-MB-231 cells accompanied by a decrease in cell proliferation and migration as well as an increase in autophagic activity; moreover, AMPK-mediated activation of autophagy contributes to anticancer effects through Akt degradation. In the present study, we also checked the growth inhibition effect of curcumin on MDA-MB-231 cells. Our data indicated that the half maximal inhibitory concentration (IC<sub>50</sub>) value of curcumin on MDA-MB-231 cells is 38.77&#x000B1;3.35 <italic>&#x003BC;</italic>M. Strikingly, the IC<sub>50</sub> value of MTH-3 on MDA-MB-231 cells is 5.37&#x000B1;1.22 <italic>&#x003BC;</italic>M (data not shown). Our results demonstrated that the MTH-3 had highly cytotoxic effects on MDA-MB-231 cells. Moreover, we also found that MTH-3 was non-cytotoxic on non-tumorigenic epithelial mammary MCF10A cells and human skin fibroblast Detroit 551 cells, respectively (data not shown). These are only preliminary data and further study is needed to validate the findings.</p>
<p>There are no reports regarding that the effects of MTH-3 on cell cycle arrest, autophagy and apoptosis and associated gene expression in human breast cancer cells. This study is first to demonstrate that MTH-3 induced cytotoxic effect on induction of G<sub>2</sub>/M phase arrest, autophagy and apoptosis in human breast adenocarcinoma MDA-MB-231 cells. The data demonstrated that MTH-3 induced growth inhibitory effects through G<sub>2</sub>/M phase arrest, apoptosis and autophagy in MDA-MB-231 cells. Our results showed that MTH-3 induced G<sub>2</sub>/M phase arrest through regulating cyclin B1 and CDK1 signaling. G<sub>2</sub>/M phase progression has been reported to regulate CDK1 and CDK2 kinases that are activated primarily in association with cyclins A and B (<xref rid="b44-ijo-52-01-0067" ref-type="bibr">44</xref>). Furthermore, MTH-3 inhibited the CDK1 activity and the protein expression of CDK1 in MDA-MB-231 cells. However, neither effect is positively correlated because CDK1 activity might be involved in kinase activation rather than CDK1/cdc2 protein level (<xref rid="b32-ijo-52-01-0067" ref-type="bibr">32</xref>,<xref rid="b33-ijo-52-01-0067" ref-type="bibr">33</xref>). Previous studies also demonstrated that curcumin inhibited cell proliferation through induction of G<sub>0</sub>/G1 phase arrest of cancer cells (<xref rid="b45-ijo-52-01-0067" ref-type="bibr">45</xref>,<xref rid="b46-ijo-52-01-0067" ref-type="bibr">46</xref>), but our finding indicated that MTH-3 induced G<sub>2</sub>/M phase arrest upon different types of cancer cell lines. However, the results are in agreement with previous studies to show that curcumin inhibited cell proliferation by inducing G<sub>2</sub>/M phase arrest in human glioblastoma U87 cells (<xref rid="b47-ijo-52-01-0067" ref-type="bibr">47</xref>) and in Bcl-2 overex-pressed MCF-7 cells (<xref rid="b48-ijo-52-01-0067" ref-type="bibr">48</xref>). Further research is required to verify the mechanism of MTH-3 action in different breast cancer cell lines (such as MCF-7 and MDA-MB-453 cells).</p>
<p>It is well documented that apoptosis plays an important role in the maintenance of tissue homeostasis for the elimination of excessive cells (<xref rid="b49-ijo-52-01-0067" ref-type="bibr">49</xref>,<xref rid="b50-ijo-52-01-0067" ref-type="bibr">50</xref>). Induction of apoptosis of cancer cells by anticancer drugs such as etoposide, cisplatin and paclitaxel have been used for treatment of cancer in target cells (<xref rid="b51-ijo-52-01-0067" ref-type="bibr">51</xref>). Apoptosis-associated signaling pathways include extrinsic (death receptor), intrinsic (mitochondria-dependent) and ER stress (unfolded protein response) signals (<xref rid="b52-ijo-52-01-0067" ref-type="bibr">52</xref>,<xref rid="b53-ijo-52-01-0067" ref-type="bibr">53</xref>). Our results demonstrated that MTH-3 promoted the protein levels of DR5, and FADD and downregulated the levels of Bcl-2 and Bcl-xL in MDA-MB-231 cells. MTH-3 also promoted the protein levels of CHOP and Bip, and it reduced the levels of Ero1, PDI, PERK, calnexin and IRE1&#x003B1; in MDA-MB-231 cells. Our novel findings suggest that both extrinsic and intrinsic pathways, and ER stress signals were involved in MTH-3-treated cells <italic>in vitro</italic>. This agrees with a previous study reporting that the major targets of apoptotic initiation are mediated by dysfunction of cellular organelles (mitochondria, ER, lysosomes and golgi apparatus) (<xref rid="b54-ijo-52-01-0067" ref-type="bibr">54</xref>).</p>
<p>Autophagy is another major clearance route for intracellular protein (<xref rid="b55-ijo-52-01-0067" ref-type="bibr">55</xref>). Recently, curcumin can induce autophagy in cancer cells (<xref rid="b56-ijo-52-01-0067" ref-type="bibr">56</xref>,<xref rid="b57-ijo-52-01-0067" ref-type="bibr">57</xref>). Our results showed that MTH-3 significantly increased protein expression of autophagy markers LC3B, Atg complex (Atg5, Atg7 and Atg12) and Beclin-1, as well as GFP-LC3 puncta formation, suggesting that LC3B was recruited to the autophagosomal membrane during autophagosome formation. Our data strongly suggest that MTH-3 activated autophagy in MDA-MB-231 cells.</p>
<p>From gene expression profiles by DNA microarray, we found that cellular and molecular responses to MTH-3 treatment are multi-faceted and mediated by various regulatory pathways in MDA-MB-231 cells. MTH-3 regulated the expression of important genes in cell cycle, pathways in cancer, MAPK signaling, base excision repair, DNA replication, p53 signaling, homologous recombination, TGF-&#x003B2; signaling, G<sub>2</sub>/M checkpoint, pyrimidine metabolism, Jak-STAT signaling, focal adhesion, endocytosis and mismatch repair pathways. The gene regulation may be responsible for inhibiting the proliferation of MDA-MB-23 cells. Cyclins associate with cyclin-dependent protein kinases (CDKs) and CDK inhibitor (CKI) can control the procedure of cell cycle to arrest the cell cycle and inhibit the cell growth of cancer cells (<xref rid="b44-ijo-52-01-0067" ref-type="bibr">44</xref>,<xref rid="b58-ijo-52-01-0067" ref-type="bibr">58</xref>). Our results from gene expression profiles indicated that MTH-3 changed the expression of cyclin and cyclin-dependent kinase inhibitor gene <italic>CDKN1A</italic>, suggesting a change in cyclin, cyclin-dependent kinase inhibitors which could finally lead to cell cycle G<sub>2</sub>/M phase arrest.</p>
<p>Heme oxygenase-1 (HO-1) has been implicated in cellular defense against oxidative stress and has anti-inflammation function (<xref rid="b59-ijo-52-01-0067" ref-type="bibr">59</xref>,<xref rid="b60-ijo-52-01-0067" ref-type="bibr">60</xref>). A recent study has demonstrated that curcumin inhibits appoptosin-induced apoptosis by upregulating HO-1 expression in SH-SY5Y cells (<xref rid="b61-ijo-52-01-0067" ref-type="bibr">61</xref>). Curcumin-induced HO-1 expression also prevents H<sub>2</sub>O<sub>2</sub>-induced cell death in wild-type and HO-2 knockout adipose-derived mesenchymal stem cells (<xref rid="b62-ijo-52-01-0067" ref-type="bibr">62</xref>). In this study of the gene expression profiles, MTH-3 upregulated the expression of heme oxygenase 1 (<italic>HMOX1</italic>) gene, suggesting that MTH-3 might have anti-inflammation and cell protection function.</p>
<p>In conclusion, the molecular signaling pathways are summarized in <xref rid="f9-ijo-52-01-0067" ref-type="fig">Fig. 9</xref>. This study is the first report to provide an approach regarding the bis(hydroxymethyl) alkanoate curcuminoid derivative, MTH-3 tends to inhibit human breast adenocarcinoma MDA-MB-231 cells. Based on the presented novel findings, the efficacy of MTH-3 might be sufficient to further investigate the potential of breast cancer treatment.</p></sec></body>
<back>
<ack>
<title>Acknowledgments</title>
<p>The present study was supported by research grants from the National Science Council of the Republic of China awarded to S.-C.K. and by China Medical University under the Aim for Top University Plan of the Ministry of Education, Taiwan (CHM106-2).</p></ack>
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<floats-group>
<fig id="f1-ijo-52-01-0067" position="float">
<label>Figure 1</label>
<caption>
<p>The chemical structures of curcumin (upper panel) and MTH-3 (bottom panel).</p></caption>
<graphic xlink:href="IJO-52-01-0067-g00.jpg"/></fig>
<fig id="f2-ijo-52-01-0067" position="float">
<label>Figure 2</label>
<caption>
<p>MTH-3 reduces cell viability and affects cell morphology in MDA-MB-231 cells. (A) Cells were incubated with or without various concentrations (1, 3, 5 and 10 <italic>&#x003BC;</italic>M) of MTH-3 for 24 h, and the viable cells were monitored using an MTT and trypan blue exclusion methods. Data are presented as the mean &#x000B1; SD of three independent experiments. The different letters (a&#x02013;d) show statistically significant differences (P&lt;0.05) in each group by the Duncan's test. (B) Cells were examined after with or without 10 <italic>&#x003BC;</italic>M MTH-3 for 24 h to photograph the changes in cell morphology using a phase-contrast microscope as described in Materials and methods. Scale bar, 10 <italic>&#x003BC;</italic>m.</p></caption>
<graphic xlink:href="IJO-52-01-0067-g01.jpg"/></fig>
<fig id="f3-ijo-52-01-0067" position="float">
<label>Figure 3</label>
<caption>
<p>MTH-3 induces G<sub>2</sub>/M phase arrest of MDA-MB-231 cells. (A) Cells were exposed to 10 <italic>&#x003BC;</italic>M MTH-3 for 24 h. The cell cycle distribution was detected using flow cytometric analysis and cell cycle distribution was quantified. (B) Cells were exposed to 10 <italic>&#x003BC;</italic>M MTH-3 and then incubated for 0, 4, 8, 16 and 24 h. The protein levels of cyclin B1, CDK1 and &#x003B2;-actin were determined by western blotting. C, control; M, MTH-3 exposure. (C) CDK1 activity was examined as described in Materials and methods. Data are presented as the mean &#x000B1; SD of three independent experiments. The different letters (a&#x02013;b) show statistically significant differences (P&lt;0.05) in each group by the Duncan's test.</p></caption>
<graphic xlink:href="IJO-52-01-0067-g02.tif"/></fig>
<fig id="f4-ijo-52-01-0067" position="float">
<label>Figure 4</label>
<caption>
<p>MTH-3 induces apoptosis of MDA-MB-231 cells. Cells were incubated with 10 <italic>&#x003BC;</italic>M MTH-3 for 24 and 48 h. Cells were collected and stained with Annexin V/propidium iodide (PI) before analysis with flow cytometry. The Annexin V-positive cells were counted, and data are presented as the mean &#x000B1; SD of three independent experiments. <sup>&#x0002A;</sup>P&lt;0.05 indicates statistically significant differences by the Duncan's test.</p></caption>
<graphic xlink:href="IJO-52-01-0067-g03.tif"/></fig>
<fig id="f5-ijo-52-01-0067" position="float">
<label>Figure 5</label>
<caption>
<p>MTH-3 activates death receptor-mediated, mitochondrial and ER stress-regulated apoptosis pathways in MDA-MB-231 cells. Cells were exposed to 10 <italic>&#x003BC;</italic>M MTH-3 for 0, 4, 8, 16 and 24 h, and cell lysates were collected for western blot analysis. (A) Death receptor-mediated (DR3, DR5 and FADD) and mitochondrial (Bcl-2 and Bcl-xL) apoptosis pathways, and (B) ER stress (Ero1, PDI, PERK, calnexin, IRE1&#x003B1;, CHOP and Bip) were performed. &#x003B2;-actin served as an internal control. C, control; M, MTH-3 exposure.</p></caption>
<graphic xlink:href="IJO-52-01-0067-g04.jpg"/></fig>
<fig id="f6-ijo-52-01-0067" position="float">
<label>Figure 6</label>
<caption>
<p>MTH-3 induces LC3B and p62 expression of MDA-MB-231 cells. Cells were treated with 10 <italic>&#x003BC;</italic>M MTH-3 for 24 h. Cells were collected and stained with LC3B-FITC antibody (green color) and p62-PE antibody (red color) and analyzed with confocal microscope. DAPI dye (blue color) is for nuclear acid (nuclear) staining. Scale bar, 10 <italic>&#x003BC;</italic>m.</p></caption>
<graphic xlink:href="IJO-52-01-0067-g05.jpg"/></fig>
<fig id="f7-ijo-52-01-0067" position="float">
<label>Figure 7</label>
<caption>
<p>MTH-3 alters the protein levels of autophagy-related proteins in MDA-MB-231 cells. Cells were incubated with 10 <italic>&#x003BC;</italic>M MTH-3 for 4, 8, 16 and 24 h, and cell lysates were collected for western blot analysis to probe autophagic signals (Atg5, Atg7, Atg12, Beclin-1, p62, LC3A and LC3B). &#x003B2;-actin was an internal control. C, control; M, MTH-3 exposure.</p></caption>
<graphic xlink:href="IJO-52-01-0067-g06.jpg"/></fig>
<fig id="f8-ijo-52-01-0067" position="float">
<label>Figure 8</label>
<caption>
<p>The possible canonical pathways from MDA-MB-231 cells after exposure to MTH-3 by cDNA microarray. Cells were treated with 10 <italic>&#x003BC;</italic>M MTH-3 for 24 h, and then were harvested before total RNA was extracted for cDNA microarray assay. The changes in gene expression scored by the number of pathways from GeneGo analysis.</p></caption>
<graphic xlink:href="IJO-52-01-0067-g07.jpg"/></fig>
<fig id="f9-ijo-52-01-0067" position="float">
<label>Figure 9</label>
<caption>
<p>The proposed model shows that MTH-3 induces G<sub>2</sub>/M phase arrest, autophagy and apoptotic cell death (death receptor/mitochondrial pathways and ER stress) in human breast adenocarcinoma MDA-MB-231 cells.</p></caption>
<graphic xlink:href="IJO-52-01-0067-g08.jpg"/></fig>
<table-wrap id="tI-ijo-52-01-0067" position="float">
<label>Table I</label>
<caption>
<p>The &gt;2.5-fold changes in mRNA levels in MDA-MB-231 cells following a 24-h treatment with 10 <italic>&#x003BC;</italic>M MTH-3 as identified using DNA microarray.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">ID</th>
<th valign="top" align="left">log2 (ratio)</th>
<th valign="top" align="center">Gene_symbol</th>
<th valign="top" align="left">Description</th></tr></thead>
<tbody>
<tr>
<td valign="top" align="left">PH_hs_0049600</td>
<td valign="top" align="left">6.643856</td>
<td valign="top" align="center">HSPA6</td>
<td valign="top" align="left">Heat shock 70 kDa protein 6 (HSP70B')</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0006387</td>
<td valign="top" align="left">6.274261</td>
<td valign="top" align="center">ZFAND2A</td>
<td valign="top" align="left">zinc finger, AN1-type domain 2A</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0004421</td>
<td valign="top" align="left">5.381376</td>
<td valign="top" align="center">PPP1R15A</td>
<td valign="top" align="left">Protein phosphatase 1, regulatory subunit 15A</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0000305</td>
<td valign="top" align="left">4.941673</td>
<td valign="top" align="center">MMP10</td>
<td valign="top" align="left">Matrix metallopeptidase 10 (stromelysin 2)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0046245</td>
<td valign="top" align="left">4.763129</td>
<td valign="top" align="center">RN7SK</td>
<td valign="top" align="left">RNA, 7SK small nuclear</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0000076</td>
<td valign="top" align="left">4.587356</td>
<td valign="top" align="center">IL12A</td>
<td valign="top" align="left">Interleukin 12A</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0027902</td>
<td valign="top" align="left">4.286664</td>
<td valign="top" align="center">ABL2</td>
<td valign="top" align="left">v-abl Abelson murine leukemia viral oncogene homolog 2</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0010276</td>
<td valign="top" align="left">4.189167</td>
<td valign="top" align="center">DUSP1</td>
<td valign="top" align="left">Dual specificity phosphatase 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0031719</td>
<td valign="top" align="left">4.146525</td>
<td valign="top" align="center">CCL26</td>
<td valign="top" align="left">Chemokine (C-C motif) ligand 26</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0000156</td>
<td valign="top" align="left">4.093858</td>
<td valign="top" align="center">DUSP2</td>
<td valign="top" align="left">Dual specificity phosphatase 2</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0011943</td>
<td valign="top" align="left">4.063702</td>
<td valign="top" align="center">HMOX1</td>
<td valign="top" align="left">Heme oxygenase (decycling) 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0045501</td>
<td valign="top" align="left">4.039442</td>
<td valign="top" align="center">EID3</td>
<td valign="top" align="left">EP300 interacting inhibitor of differentiation 3</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0004561</td>
<td valign="top" align="left">3.997336</td>
<td valign="top" align="center">GEM</td>
<td valign="top" align="left">GTP binding protein overexpressed in skeletal muscle</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0042334</td>
<td valign="top" align="left">3.931415</td>
<td valign="top" align="center">MT4</td>
<td valign="top" align="left">Metallothionein 4</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0048553</td>
<td valign="top" align="left">3.866096</td>
<td valign="top" align="center">MYCT1</td>
<td valign="top" align="left">myc target 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0000684</td>
<td valign="top" align="left">3.853854</td>
<td valign="top" align="center">DNAJB9</td>
<td valign="top" align="left">DnaJ (Hsp40) homolog, subfamily B, member 9</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0035404</td>
<td valign="top" align="left">3.763571</td>
<td valign="top" align="center">SAT1</td>
<td valign="top" align="left">Spermidine/spermine N1-acetyltransferase 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0000057</td>
<td valign="top" align="left">3.698185</td>
<td valign="top" align="center">ATF3</td>
<td valign="top" align="left">Activating transcription factor 3</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0025319</td>
<td valign="top" align="left">3.562429</td>
<td valign="top" align="center">C3orf52</td>
<td valign="top" align="left">Chromosome 3 open reading frame 52</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0033101</td>
<td valign="top" align="left">3.555868</td>
<td valign="top" align="center">DDIT3</td>
<td valign="top" align="left">DNA-damage-inducible transcript 3 (CHOP)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0002700</td>
<td valign="top" align="left">3.513438</td>
<td valign="top" align="center">OSGIN1</td>
<td valign="top" align="left">Oxidative stress induced growth inhibitor 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0037472</td>
<td valign="top" align="left">3.480422</td>
<td valign="top" align="center">MALAT1</td>
<td valign="top" align="left">Metastasis associated lung adenocarcinoma transcript 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0035765</td>
<td valign="top" align="left">3.427173</td>
<td valign="top" align="center">GDF15</td>
<td valign="top" align="left">Growth differentiation factor 15</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0002492</td>
<td valign="top" align="left">3.366024</td>
<td valign="top" align="center">SAT1</td>
<td valign="top" align="left">Spermidine/spermine N1-acetyltransferase 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0062199</td>
<td valign="top" align="left">3.356707</td>
<td valign="top" align="center">AKR1C1|LOC101060798</td>
<td valign="top" align="left">Aldo-keto reductase family 1, member C1|aldo-keto reductase family 1 member C2-like</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0000852</td>
<td valign="top" align="left">3.324182</td>
<td valign="top" align="center">SESN2</td>
<td valign="top" align="left">Sestrin 2</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0023008</td>
<td valign="top" align="left">3.242113</td>
<td valign="top" align="center">FRS2</td>
<td valign="top" align="left">Fibroblast growth factor receptor substrate 2</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0004751</td>
<td valign="top" align="left">3.219326</td>
<td valign="top" align="center">MMP1</td>
<td valign="top" align="left">Matrix metallopeptidase 1 (interstitial collagenase)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0031143</td>
<td valign="top" align="left">3.213328</td>
<td valign="top" align="center">VIMP</td>
<td valign="top" align="left">VCP-interacting membrane protein</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0025525</td>
<td valign="top" align="left">3.198476</td>
<td valign="top" align="center">CLU</td>
<td valign="top" align="left">Clusterin</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0024315</td>
<td valign="top" align="left">3.075314</td>
<td valign="top" align="center">DNAJB4</td>
<td valign="top" align="left">DnaJ (Hsp40) homolog, subfamily B, member 4</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0035614</td>
<td valign="top" align="left">3.062771</td>
<td valign="top" align="center">RC3H1</td>
<td valign="top" align="left">Ring finger and CCCH-type domains 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0027152</td>
<td valign="top" align="left">3.037995</td>
<td valign="top" align="center">RMND5A</td>
<td valign="top" align="left">Required for meiotic nuclear division 5 homolog A (<italic>S. cerevisiae</italic>)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0021974</td>
<td valign="top" align="left">3.010862</td>
<td valign="top" align="center">DNAJC3</td>
<td valign="top" align="left">DnaJ (Hsp40) homolog, subfamily C, member 3</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0061784</td>
<td valign="top" align="left">2.967357</td>
<td valign="top" align="center">CDKN1A</td>
<td valign="top" align="left">Cyclin-dependent kinase inhibitor 1A (p21, Cip1)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0035466</td>
<td valign="top" align="left">2.962064</td>
<td valign="top" align="center">AKR1C3|AKR1C1</td>
<td valign="top" align="left">Aldo-keto reductase family 1, member C3|aldo-keto reductase family 1, member C1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0027162</td>
<td valign="top" align="left">2.960759</td>
<td valign="top" align="center">SLC3A2</td>
<td valign="top" align="left">Solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0022919</td>
<td valign="top" align="left">2.960552</td>
<td valign="top" align="center">CLCF1</td>
<td valign="top" align="left">Cardiotrophin-like cytokine factor 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0000255</td>
<td valign="top" align="left">2.916655</td>
<td valign="top" align="center">SRGN</td>
<td valign="top" align="left">Serglycin</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0024155</td>
<td valign="top" align="left">2.904033</td>
<td valign="top" align="center">CDKN1A</td>
<td valign="top" align="left">Cyclin-dependent kinase inhibitor 1A (p21, Cip1)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0043719</td>
<td valign="top" align="left">2.894684</td>
<td valign="top" align="center">HMGCS1</td>
<td valign="top" align="left">3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0045838</td>
<td valign="top" align="left">2.838192</td>
<td valign="top" align="center">SLC6A6</td>
<td valign="top" align="left">Solute carrier family 6 (neurotransmitter transporter, taurine), member 6</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0014155</td>
<td valign="top" align="left">2.836392</td>
<td valign="top" align="center">HSPA1B</td>
<td valign="top" align="left">Heat shock 70 kDa protein 1B</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0044272</td>
<td valign="top" align="left">2.829317</td>
<td valign="top" align="center">CLK1</td>
<td valign="top" align="left">CDC-like kinase 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0048881</td>
<td valign="top" align="left">2.809371</td>
<td valign="top" align="center">FKBP4</td>
<td valign="top" align="left">FK506 binding protein 4, 59 kDa</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0020147</td>
<td valign="top" align="left">2.803912</td>
<td valign="top" align="center">CLK1</td>
<td valign="top" align="left">CDC-like kinase 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0028987</td>
<td valign="top" align="left">2.768552</td>
<td valign="top" align="center">TCF21</td>
<td valign="top" align="left">Transcription factor 21</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0042409</td>
<td valign="top" align="left">2.76703</td>
<td valign="top" align="center">DNAJB1</td>
<td valign="top" align="left">DnaJ (Hsp40) homolog, subfamily B, member 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0001262</td>
<td valign="top" align="left">2.748306</td>
<td valign="top" align="center">SENP5</td>
<td valign="top" align="left">SUMO1/sentrin specific peptidase 5</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0060828</td>
<td valign="top" align="left">2.734692</td>
<td valign="top" align="center">TRIB3</td>
<td valign="top" align="left">Tribbles homolog 3 (<italic>Drosophila</italic>)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0023556</td>
<td valign="top" align="left">2.733421</td>
<td valign="top" align="center">C21orf91</td>
<td valign="top" align="left">Chromosome 21 open reading frame 91</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0061012</td>
<td valign="top" align="left">2.731293</td>
<td valign="top" align="center">ZBTB21</td>
<td valign="top" align="left">Zinc finger and BTB domain containing 21</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0029660</td>
<td valign="top" align="left">2.695316</td>
<td valign="top" align="center">AKR1C1</td>
<td valign="top" align="left">Aldo-keto reductase family 1, member C1|aldo-keto reductase family 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0037242</td>
<td valign="top" align="left">2.683231</td>
<td valign="top" align="center">MALAT1</td>
<td valign="top" align="left">Metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0002812</td>
<td valign="top" align="left">2.667718</td>
<td valign="top" align="center">C18orf25</td>
<td valign="top" align="left">Chromosome 18 open reading frame 25</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0027209</td>
<td valign="top" align="left">2.665362</td>
<td valign="top" align="center">GADD45B</td>
<td valign="top" align="left">Growth arrest and DNA-damage-inducible, &#x003B2;</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0002971</td>
<td valign="top" align="left">2.664712</td>
<td valign="top" align="center">ZNF77</td>
<td valign="top" align="left">Zinc finger protein 77</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0003180</td>
<td valign="top" align="left">2.646292</td>
<td valign="top" align="center">SMIM13</td>
<td valign="top" align="left">Small integral membrane protein 13</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0000694</td>
<td valign="top" align="left">2.625719</td>
<td valign="top" align="center">RND3</td>
<td valign="top" align="left">Rho family GTPase 3</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0023711</td>
<td valign="top" align="left">2.599232</td>
<td valign="top" align="center">HSPA5</td>
<td valign="top" align="left">Heat shock 70 kDa protein 5</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0023894</td>
<td valign="top" align="left">2.583817</td>
<td valign="top" align="center">TRIB3</td>
<td valign="top" align="left">Tribbles homolog 3 (<italic>Drosophila</italic>)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0060053</td>
<td valign="top" align="left">2.574976</td>
<td valign="top" align="center">ZNF121</td>
<td valign="top" align="left">Zinc finger protein 121</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0014119</td>
<td valign="top" align="left">2.571605</td>
<td valign="top" align="center">BRF2</td>
<td valign="top" align="left">BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0033027</td>
<td valign="top" align="left">2.547837</td>
<td valign="top" align="center">SIK1</td>
<td valign="top" align="left">Salt-inducible kinase 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0024236</td>
<td valign="top" align="left">2.547678</td>
<td valign="top" align="center">ATP2A2</td>
<td valign="top" align="left">ATPase, Ca++ transporting, cardiac muscle, slow twitch 2</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0042225</td>
<td valign="top" align="left">2.541029</td>
<td valign="top" align="center">DUSP5</td>
<td valign="top" align="left">Dual specificity phosphatase 5</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0044921</td>
<td valign="top" align="left">2.534876</td>
<td valign="top" align="center">HSPA1A</td>
<td valign="top" align="left">Heat shock 70 kDa protein 1A</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0000566</td>
<td valign="top" align="left">2.528881</td>
<td valign="top" align="center">SLC25A25</td>
<td valign="top" align="left">Solute carrier family 25, member 25</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0030976</td>
<td valign="top" align="left">2.516291</td>
<td valign="top" align="center">NFKBIB</td>
<td valign="top" align="left">Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, &#x003B2;</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0014995</td>
<td valign="top" align="left">&#x02212;3.653241</td>
<td valign="top" align="center">METTL7A</td>
<td valign="top" align="left">Methyltransferase like 7A</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0023845</td>
<td valign="top" align="left">&#x02212;3.269308</td>
<td valign="top" align="center">BBS2</td>
<td valign="top" align="left">Bardet-Biedl syndrome 2</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0009437</td>
<td valign="top" align="left">&#x02212;3.05235</td>
<td valign="top" align="center">TOP2A</td>
<td valign="top" align="left">Topoisomerase (DNA) II &#x003B1; 170 kDa</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0047352</td>
<td valign="top" align="left">&#x02212;3.043277</td>
<td valign="top" align="center">MARCKS</td>
<td valign="top" align="left">Myristoylated alanine-rich protein kinase C substrate</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0047965</td>
<td valign="top" align="left">&#x02212;2.959225</td>
<td valign="top" align="center">PHLDA1</td>
<td valign="top" align="left">Pleckstrin homology-like domain, family A, member 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0040619</td>
<td valign="top" align="left">&#x02212;2.891495</td>
<td valign="top" align="center">MXD3</td>
<td valign="top" align="left">MAX dimerization protein 3</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0012629</td>
<td valign="top" align="left">&#x02212;2.890238</td>
<td valign="top" align="center">H1F0</td>
<td valign="top" align="left">H1 histone family, member 0</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0004988</td>
<td valign="top" align="left">&#x02212;2.878231</td>
<td valign="top" align="center">LMNB1</td>
<td valign="top" align="left">Lamin B1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0035609</td>
<td valign="top" align="left">&#x02212;2.788184</td>
<td valign="top" align="center">ETV1</td>
<td valign="top" align="left">Ets variant 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0049449</td>
<td valign="top" align="left">&#x02212;2.729758</td>
<td valign="top" align="center">GPR39</td>
<td valign="top" align="left">G protein-coupled receptor 39</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0027843</td>
<td valign="top" align="left">&#x02212;2.724437</td>
<td valign="top" align="center">FAM20C</td>
<td valign="top" align="left">FAmily with sequence similarity 20, member C</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0027863</td>
<td valign="top" align="left">&#x02212;2.718276</td>
<td valign="top" align="center">LRRC45</td>
<td valign="top" align="left">Leucine rich repeat containing 45</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0007383</td>
<td valign="top" align="left">&#x02212;2.717289</td>
<td valign="top" align="center">F2R</td>
<td valign="top" align="left">Coagulation factor II (thrombin) receptor</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0036878</td>
<td valign="top" align="left">&#x02212;2.71449</td>
<td valign="top" align="center">PIF1</td>
<td valign="top" align="left">PIF1 5&#x02032;-to-3&#x02032; DNA helicase homolog (<italic>S. cerevisiae</italic>)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0047697</td>
<td valign="top" align="left">&#x02212;2.688182</td>
<td valign="top" align="center">ARF6</td>
<td valign="top" align="left">ADP-ribosylation factor 6</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0048993</td>
<td valign="top" align="left">&#x02212;2.677322</td>
<td valign="top" align="center">NRP1</td>
<td valign="top" align="left">Neuropilin 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0031540</td>
<td valign="top" align="left">&#x02212;2.66121</td>
<td valign="top" align="center">GNG2</td>
<td valign="top" align="left">Guanine nucleotide binding protein (G protein), gamma 2</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0010634</td>
<td valign="top" align="left">&#x02212;2.659899</td>
<td valign="top" align="center">TXNIP|LOC101060503</td>
<td valign="top" align="left">Thioredoxin interacting protein|thioredoxin-interacting protein-like</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0028935</td>
<td valign="top" align="left">&#x02212;2.621805</td>
<td valign="top" align="center">CCDC85B</td>
<td valign="top" align="left">Coiled-coil domain containing 85B</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0000866</td>
<td valign="top" align="left">&#x02212;2.612763</td>
<td valign="top" align="center">OMA1</td>
<td valign="top" align="left">OMA1 zinc metallopeptidase homolog (<italic>S. cerevisiae</italic>)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0030800</td>
<td valign="top" align="left">&#x02212;2.552826</td>
<td valign="top" align="center">FANCF</td>
<td valign="top" align="left">Fanconi anemia, complementation group F</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0025966</td>
<td valign="top" align="left">&#x02212;2.55207</td>
<td valign="top" align="center">CTDSP1</td>
<td valign="top" align="left">CTD small phosphatase 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0023862</td>
<td valign="top" align="left">&#x02212;2.551096</td>
<td valign="top" align="center">CBY1</td>
<td valign="top" align="left">Chibby homolog 1 (<italic>Drosophila</italic>)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0047571</td>
<td valign="top" align="left">&#x02212;2.546813</td>
<td valign="top" align="center">PDP1</td>
<td valign="top" align="left">Pyruvate dehyrogenase phosphatase catalytic subunit 1</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0028200</td>
<td valign="top" align="left">&#x02212;2.537288</td>
<td valign="top" align="center">CENPI</td>
<td valign="top" align="left">Centromere protein I</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0003147</td>
<td valign="top" align="left">&#x02212;2.533627</td>
<td valign="top" align="center">PDGFC</td>
<td valign="top" align="left">Platelet derived growth factor C</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0035337</td>
<td valign="top" align="left">&#x02212;2.514458</td>
<td valign="top" align="center">OMA1</td>
<td valign="top" align="left">OMA1 zinc metallopeptidase homolog (<italic>S. cerevisiae</italic>)</td></tr>
<tr>
<td valign="top" align="left">PH_hs_0038982</td>
<td valign="top" align="left">&#x02212;2.502536</td>
<td valign="top" align="center">LOC100134259</td>
<td valign="top" align="left">Uncharacterized LOC100134259</td></tr></tbody></table></table-wrap></floats-group></article>
