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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">IJO</journal-id>
<journal-title-group>
<journal-title>International Journal of Oncology</journal-title></journal-title-group>
<issn pub-type="ppub">1019-6439</issn>
<issn pub-type="epub">1791-2423</issn>
<publisher>
<publisher-name>D.A. Spandidos</publisher-name></publisher></journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3892/ijo.2019.4842</article-id>
<article-id pub-id-type="publisher-id">ijo-55-03-0597</article-id>
<article-categories>
<subj-group>
<subject>Articles</subject></subj-group></article-categories>
<title-group>
<article-title>A systematic review of the prevalence of DNA damage response gene mutations in prostate cancer</article-title></title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Lang</surname><given-names>Shona H.</given-names></name><xref rid="af1-ijo-55-03-0597" ref-type="aff">1</xref><xref ref-type="corresp" rid="c1-ijo-55-03-0597"/></contrib>
<contrib contrib-type="author">
<name><surname>Swift</surname><given-names>Stephanie L.</given-names></name><xref rid="af1-ijo-55-03-0597" ref-type="aff">1</xref></contrib>
<contrib contrib-type="author">
<name><surname>White</surname><given-names>Heath</given-names></name><xref rid="af1-ijo-55-03-0597" ref-type="aff">1</xref></contrib>
<contrib contrib-type="author">
<name><surname>Misso</surname><given-names>Kate</given-names></name><xref rid="af2-ijo-55-03-0597" ref-type="aff">2</xref></contrib>
<contrib contrib-type="author">
<name><surname>Kleijnen</surname><given-names>Jos</given-names></name><xref rid="af1-ijo-55-03-0597" ref-type="aff">1</xref><xref rid="af3-ijo-55-03-0597" ref-type="aff">3</xref></contrib>
<contrib contrib-type="author">
<name><surname>Quek</surname><given-names>Ruben G.W.</given-names></name><xref rid="af4-ijo-55-03-0597" ref-type="aff">4</xref></contrib></contrib-group>
<aff id="af1-ijo-55-03-0597">
<label>1</label>Reviews Department</aff>
<aff id="af2-ijo-55-03-0597">
<label>2</label>Information Department, Kleijnen Systematic Reviews Ltd., Escrick, York YO19 6FD, UK</aff>
<aff id="af3-ijo-55-03-0597">
<label>3</label>School for Public Health and Primary Care, Maastricht University, Maastricht, 6200 MD, The Netherlands</aff>
<aff id="af4-ijo-55-03-0597">
<label>4</label>Health Economics and Outcomes Research, Pfizer Inc., San Francisco, CA 94105, USA</aff>
<author-notes>
<corresp id="c1-ijo-55-03-0597">Correspondence to: Dr Shona H. Lang, Reviews Department, Kleijnen Systematic Reviews Ltd., Uni 6, Escrick Business Park, Riccall Road, Escrick, York YO19 6FD, UK, E-mail: <email>shona@systematic-reviews.com</email></corresp></author-notes>
<pub-date pub-type="collection">
<month>09</month>
<year>2019</year></pub-date>
<pub-date pub-type="epub">
<day>16</day>
<month>07</month>
<year>2019</year></pub-date>
<volume>55</volume>
<issue>3</issue>
<fpage>597</fpage>
<lpage>616</lpage>
<history>
<date date-type="received">
<day>29</day>
<month>01</month>
<year>2019</year></date>
<date date-type="accepted">
<day>28</day>
<month>06</month>
<year>2019</year></date></history>
<permissions>
<copyright-statement>Copyright: &#x000A9; Lang et al.</copyright-statement>
<copyright-year>2019</copyright-year>
<license license-type="open-access">
<license-p>This is an open access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by-nc-nd/4.0/">Creative Commons Attribution-NonCommercial-NoDerivs License</ext-link>, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.</license-p></license></permissions>
<abstract>
<p>Several ongoing international prostate cancer (PC) clinical trials are exploring therapies that target the DNA damage response (DDR) pathway. This systematic review summarizes the prevalence of DDR mutation carriers in the unselected (general) PC and familial PC populations. A total of 11 electronic databases, 10 conference proceedings, and grey literature sources were searched from their inception to December 2017. Studies reporting the prevalence of somatic and/or germline DDR mutations were summarized. Metastatic PC (mPC), castration-resistant PC (CRPC) and metastatic CRPC (mCRPC) subgroups were included. A total of 11,648 records were retrieved, and 80 studies (103 records) across all PC populations were included; 59 records were of unselected PC and 13 records of familial PC. Most data were available for DDR panels (n=12 studies), ataxia telangiectasia mutated (<italic>ATM</italic>; n=13), breast cancer susceptibility gene (<italic>BRCA</italic>)<italic>1</italic> (n=14) and <italic>BRCA2</italic> (n=20). <italic>ATM</italic>, <italic>BRCA2</italic> and partner and localizer of <italic>BRCA2 (PALB2)</italic> had the highest mutation rates (&#x02265;4%). Median prevalence rates for DDR germline mutations were 18.6% in PC (range, 17.2-19%; three studies, n=1,712), 11.6% in mPC (range, 11.4-11.8%; two studies, n=1,261) and 8.3% in mCRPC (range, 7.5-9.1%; two studies, n=738). Median prevalence rates for DDR somatic mutations were 10.7% in PC (range, 4.9-22%; three studies, n=680), 13.2% in mPC (range, 10-16.4%; two studies, n=105) and not reported (NR) in mCRPC. The prevalence of DDR germline and/or somatic mutations was 27% in PC (one study, n=221), 22.67% in mCRPC (one study, n=150) and NR in mPC. In familial PC, median mutation prevalence was 12.1% (range, 7.3-16.9%) for germline DDR (two studies, n=315) and 3.7% (range, 1.3-7.9%) for <italic>BRCA2</italic> (six studies, n=945). In total, 88% of studies were at a high risk of bias. The prevalence of DDR gene mutations in PC varied widely within somatic subgroups depending on study size, genetic screening techniques, DDR mutation definition and PC diagnosis; somatic and/or germline DDR mutation prevalence was in the range of 23-27% in PC. These findings support DDR mutation testing for all patients with PC (including those with mCRPC). With the advent of the latest clinical practice PC guidelines highlighting the importance of DDR mutation screening, and ongoing mCRPC clinical trials evaluating DDR mutation-targeted drugs, future larger epidemiological studies are warranted to further quantify the international burden of DDR mutations in PC.</p></abstract>
<kwd-group>
<kwd>DNA damage response</kwd>
<kwd>genes</kwd>
<kwd>germline</kwd>
<kwd>mutations</kwd>
<kwd>prostate cancer</kwd>
<kwd>somatic</kwd></kwd-group></article-meta></front>
<body>
<sec sec-type="intro">
<title>Introduction</title>
<p>Prostate cancer (PC) is a major global health burden, with a worldwide incidence of 1.1 million in 2012 (<xref rid="b1-ijo-55-03-0597" ref-type="bibr">1</xref>). While typical active treatments may involve surgery, chemotherapy, brachytherapy and/or androgen-deprivation therapy, these often fail to be curative, with many patients developing metastatic disease or therapeutic resistance. Aggressive prostate disease, such as metastatic castration-resistant PC (mCRPC), is usually lethal.</p>
<p>The DNA damage response (DDR) is an essential pathway that ensures the survival of both normal and malignant prostate cells and includes many important genes, such as breast cancer susceptibility gene (<italic>BRCA</italic>)1/2, ataxia telangiectasia mutated (<italic>ATM</italic>) and partner and localizer of <italic>BRCA2</italic> (<italic>PALB2</italic>) (<xref rid="b2-ijo-55-03-0597" ref-type="bibr">2</xref>). Efficient and specific repair of DNA damage maintains the genomic integrity of the cell and ensures its ability to persist and proliferate. Mutations in DDR genes contribute to destabilizing PC cells, often making them more susceptible to cell death (<xref rid="b3-ijo-55-03-0597" ref-type="bibr">3</xref>). Poly (ADP)-ribose polymerase (PARP) inhibitors represent an emerging therapeutic approach to target the DDR pathway in malignant cells (<xref rid="b3-ijo-55-03-0597" ref-type="bibr">3</xref>). In cancer cells that already harbor multiple other genetic mutations (e.g. <italic>BRCA1/2</italic> mutations), PARP inhibition can render the cell unable to repair DNA damage, leading to cell death (<xref rid="b3-ijo-55-03-0597" ref-type="bibr">3</xref>).</p>
<p>In PC, mutations in genes involved in the DDR pathway are relatively common, particularly in the advanced stages of the disease (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>). Several ongoing international PC clinical trials are exploring PARP inhibitors that target the DDR pathway, and the contribution of DDR gene mutations to improving therapeutic outcomes in the context of PARP inhibitor therapy is becoming more evident (Swift <italic>et al</italic>, unpublished data).</p>
<p>Treatment guidelines and consensus statements from international clinical organizations have recently been published to reflect the importance of DDR mutation screening for the management of PC, although the precise genes or gene panels are not always in accordance. The National Comprehensive Cancer Network (NCCN) 2018 guidelines for PC state that a strong family history consists of: Brother, father or multiple family members diagnosed with prostate cancer by at least 60 years of age; and known germline DNA repair gene abnormalities, especially <italic>BRCA2</italic> mutation. These guidelines advise clinicians as follows: 'Consider testing for mutations in these genes (germline and somatic): <italic>BRCA1</italic>, <italic>BRCA2</italic>, <italic>ATM</italic>, <italic>PALB2</italic>, <italic>FANCA</italic>; refer to genetic counseling if positive. At present, this information may be useful for genetic counseling, early use of platinum chemotherapy, or eligibility for clinical trials (e.g. PARP inhibitors)' (<xref rid="b5-ijo-55-03-0597" ref-type="bibr">5</xref>). The Philadelphia Prostate Cancer Consensus Conference 2017 recommended that all patients with familial and metastatic PC (mPC) consider genetic testing &#x0005B;encompassing <italic>ATM</italic>, <italic>BRCA1</italic>, <italic>BRCA2</italic>, nibrin (<italic>NBN</italic>) and DNA mismatch repair genes&#x0005D; (<xref rid="b6-ijo-55-03-0597" ref-type="bibr">6</xref>): 'There was strong consensus to factor <italic>BRCA2</italic> mutations into &#x0005B;prostate cancer&#x0005D; screening discussions. <italic>BRCA2</italic> achieved moderate consensus for factoring into early stage management discussion, with stronger consensus in high-risk/advanced and metastatic setting&#x0005B;s&#x0005D;' (<xref rid="b6-ijo-55-03-0597" ref-type="bibr">6</xref>). The St Gallen Advanced Prostate Cancer Consensus Conference 2017 reported 'that <italic>BRCA1</italic>, <italic>BRCA2</italic> and <italic>ATM</italic> mutations should be reported &#x0005B;for mCRPC&#x0005D; because that knowledge will likely influence management decisions' (<xref rid="b7-ijo-55-03-0597" ref-type="bibr">7</xref>). It is important that national/regional healthcare providers and decision makers be kept informed of the burden of DDR mutations in PC.</p>
<p>The authors of the present study undertook a systematic review of data to identify and summarize the prevalence of DDR mutations in the unselected (general) population of patients with PC (including mPC, mCRPC and CRPC). Selected subgroup data for familial PC were also presented, since this population is currently considered a key focus for genetic testing guidelines. Studies that reported on other selected subgroups (including young-onset PC, lethal PC, ductal PC, patients receiving pre-specified treatment regimens, and Ashkenazi Jewish and African-American populations) were identified but were not the focus of the review. Methodological factors and limitations of the included studies that may have led to variation in the prevalence rates reported are noted and discussed.</p></sec>
<sec sec-type="materials|methods">
<title>Materials and methods</title>
<sec>
<title>Inclusion criteria</title>
<p>This systematic review was carried out in accordance with the methodologies recommended by the Cochrane Collaboration (<xref rid="b8-ijo-55-03-0597" ref-type="bibr">8</xref>) and the Centre for Reviews and Dissemination (<xref rid="b9-ijo-55-03-0597" ref-type="bibr">9</xref>). The review adhered to a pre-defined protocol, which stipulated the methodology provided below. Studies that reported the prevalence of mutated DDR genes in men with PC, castration-resistant PC (CRPC), mPC or mCRPC were included. Detailed inclusion criteria (including DDR definition) are provided in <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S1</xref>.</p></sec>
<sec>
<title>Search methods</title>
<p>In order to identify relevant studies, a range of electronic databases (n=11) were searched from their inception to December 2017, including Medline (Ovid), Embase (Ovid), CINAHL (EBSCO) and the Cochrane Database of Systematic Reviews (Wiley). Searches used a combination of text and database thesaurus terms. No restrictions on language or publication status were applied. Searches of conference abstracts and reference lists of articles were conducted. Full details of the search methods employed, the databases searched, and the Embase search strategy are provided in <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S2</xref>. Titles and abstracts were independently screened by two reviewers. Full paper copies were independently examined in detail by two reviewers to determine whether or not they met the inclusion criteria. Data were extracted from the included studies using a specifically designed and piloted data extraction sheet developed using Microsoft Excel 2016 (Microsoft Corporation). Details of the study methods, population characteristics, risk of bias, and outcome data were extracted from each study by one reviewer and checked for accuracy against the original publication by a second reviewer. Criteria used to assess the risk of bias were taken from the Joanna Briggs Institute Critical Appraisal Checklist for studies reporting prevalence data (<xref rid="b10-ijo-55-03-0597" ref-type="bibr">10</xref>). Any disagreements or discrepancies in study selection or data extraction were resolved by consensus or through consultation with a third reviewer.</p></sec>
<sec>
<title>Data synthesis</title>
<p>A narrative summary of all included studies was produced. The results prioritized the following countries: Australia, Canada, France, Germany, Israel, Italy, Japan, Korea, Russia, Spain, the UK and the USA. Multinational studies were summarized separately. Analysis of prevalence was primarily conducted for the unselected PC population and familial PC subgroups only; data for additional subgroups identified during screening (including young-onset PC, ductal PC, lethal PC, African-American with PC, Ashkenazi Jewish with PC or patients receiving pre-specified treatment regimens) were also extracted. Studies were excluded from the analysis of prevalence if they involved: i) Specific mutation(s) in a given gene rather than all mutations for a given gene (unless the study was familial); ii) &#x0003C;50 participants (unless the study was familial), to focus on well powered studies (<xref rid="b11-ijo-55-03-0597" ref-type="bibr">11</xref>,<xref rid="b12-ijo-55-03-0597" ref-type="bibr">12</xref>); or iii) did not clearly report whether a mutation was germline or somatic. Such studies are summarized in <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S3</xref>, together with reported prevalence values. The median prevalence and range were reported for each gene of interest or combination of genes (DDR). If multiple definitions were available for a given gene mutation, then the broadest definition was included where possible. The median prevalence rates were compared between germline and somatic mutations or between prostate subgroups if the dataset was greater than 500 combined participants, to focus on data with a large sample size.</p></sec></sec>
<sec sec-type="results">
<title>Results</title>
<sec>
<title>Search methods and inclusion assessment</title>
<p>In total, 11,648 titles were retrieved from the database searches. A total of 14 articles were identified from hand and citation searching. Four articles were identified from conference abstracts. <xref rid="f1-ijo-55-03-0597" ref-type="fig">Fig. 1</xref> summarizes the flow of studies through the search and screening process. A total of 265 articles were excluded after the full records were read (<xref rid="f1-ijo-55-03-0597" ref-type="fig">Fig. 1</xref> and <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S3</xref>). There were 123 records identified for inclusion in the review, though 20 records were not from countries of interest and were not considered further (<xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S3</xref>). For the prioritized countries, 103 records from 80 studies (some of which had multiple records or publications) were identified for inclusion in the present review. A total of 59 records focused on unselected patient populations, and 13 records focused on familial PC patients.</p>
<p>Several records reporting on additional selected subgroups were identified, including 11 for Ashkenazi Jewish patients, 10 for patients receiving pre-specified treatment regimens, five for young-onset (&#x02264;55 or 65 years) PC, five for lethal PC, two for ductal PC and one for African-American patients with PC. The results for these subgroups are presented in <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendices S3</xref> and <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">S4</xref>, together with reported prevalence values.</p></sec>
<sec>
<title>Unselected populations</title>
<p>A total of 47 studies (59 records) were identified for the unselected population. Out of the 47 studies, the majority (22 studies) were conducted exclusively in the USA (<xref rid="tI-ijo-55-03-0597" ref-type="table">Table I</xref>). A total of five studies were conducted in the UK, three in Canada and two in Japan. Denmark, Germany, Israel and Spain each provided a single study. A total of nine studies recruited patients from multiple locations; the country of recruitment was not reported for two studies (both abstracts).</p>
<p>In total, 37 of the 47 primary studies reported results for patients with unselected PC, five of which focused on primary or localized PC (the authors' descriptions are reported where the definitions of disease terms were not made more explicit). Four studies focused on mPC and six studies focused on mCRPC.</p>
<p>The numbers of patients in the studies varied considerably, ranging from 8 to 39,014. A total of 10 studies included &#x0003C;50 patients in their cohort, 23 studies included between 50 and 500 patients, and 14 studies included &#x0003E;500 patients. The majority of studies failed to report recruitment or enrollment dates (32 studies). Of the remaining studies, 11 commenced recruitment between 1990 and 1998, and only four recruited patients after the year 2000.</p>
<p>Detailed patient baseline details are presented in <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S5</xref>. Generally, studies provided limited baseline details and inclusion criteria.</p></sec>
<sec>
<title>Familial prostate cancer</title>
<p>A total of 11 primary studies (and two related publications) focused on patients with familial PC (<xref rid="tII-ijo-55-03-0597" ref-type="table">Table II</xref>). As with the studies targeting unselected populations, the majority included patients from the USA (six studies, including one multinational study) and the UK (two studies). Two studies were identified for Germany (including the single multinational study), and one study each included patients from Australia and Japan. All 11 studies exclusively reported results for patients with unselected PC. For the selected familial PC subgroup, specific DDR mutations are described in <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S4</xref>.</p></sec>
<sec>
<title>DNA damage response gene definition and reported methodology</title>
<p>The DDR genes reported and analyzed are presented in <xref rid="tIII-ijo-55-03-0597" ref-type="table">Table III</xref>. In total, 40 studies (50%) and 25 studies (31%) analyzed germline and somatic mutations, respectively. Six studies (7.5%) considered both germline and somatic mutations, and nine studies (11%) did not specify the nature of the mutation.</p>
<p>The source of DNA and the methods of genetic analysis varied considerably among studies (<xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S6</xref>). The major sources of DNA were blood (39 studies, 48.1%) and tumor tissue (28 studies, 34.6%). Six samples were sourced from cell-free DNA (7.4%), five from paraffin-embedded tumor tissue (6.2%), and four from buccal swabs/saliva (4.9%). One study sourced DNA from a single-cell suspension of a primary tumor (1.2%). Nine studies did not report the source of the DNA analyzed (11.1%).</p>
<p>The two most frequently used methods of mutational analysis were PCR (29 studies, 35.8%) and next-generation sequencing (19 studies, 23.5%). Seven studies performed whole-exome sequencing (8.6%), three used Sanger sequencing (3.7%), three used capture sequencing (3.7%) and two used fluorescence <italic>in situ</italic> hybridization (FISH; 2.5%). A total of 10 studies used methods other than those specified within this report (12.3%), whereas six studies (7.4%) did not report which methods were used.</p>
<p>DDR genes could be separated into three general categories: Those that focused on specific mutations in a specific gene (21 studies, 25.9%); those that focused on all, or undefined, mutations in a specific gene (22 studies, 27.1%); and those that focused on undefined mutations in multiple DDR genes (38 studies, 46.9%). Definitions for individual gene mutations or DDR combinations varied considerably from study to study.</p></sec>
<sec>
<title>Risk of bias of included studies</title>
<p>None of the studies were free from the risk of bias based on the Joanna Briggs Institute Critical Appraisal Checklist; 88% (of the 80 included studies) had at least one domain judged to be high risk (<xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S7</xref> and <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Fig. S1</xref>). The majority of studies had a sample size of &#x0003E;50 participants (79% of studies), an analysis with sufficient coverage/clearly described mutations (84%), and appropriate statistical analysis with a clear prevalence calculation (74%). Overall, however, the quality of reporting was poor and did not allow for judgment of how well participants were recruited or how data were acquired; consequently, 76% of studies were judged to have an unclear risk of bias. Likewise, the criteria for the diagnosis of PC (e.g. the Gleason score) were unreported in the majority of studies (74%), and it was unclear in most studies (91%) whether a pathologist had performed the diagnosis. Confounding factors were not taken into consideration for prevalence reporting in the majority of studies (71%). In addition, the majority of studies (73%) did not describe one or more of the participant baseline characteristics for this review.</p></sec>
<sec>
<title>Results for prevalence in the unselected population</title>
<p>All studies excluded at the analysis stage are summarized in <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S3</xref>, together with prevalence calculations. To establish if there were patterns of prevalence between somatic and germline mutations, between different genes, and between different PC types, all median prevalence values for all gene datasets were compared (<xref rid="f2-ijo-55-03-0597" ref-type="fig">Fig. 2</xref> and <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S8</xref>). Patients identified as having primary PC were grouped under unselected PC; thus, unselected PC was a mixed group in terms of overall diagnosis.</p>
<p>The most evidence was available for DDR gene panels &#x0005B;14 datasets; 11 studies (<xref rid="b13-ijo-55-03-0597" ref-type="bibr">13</xref>-<xref rid="b23-ijo-55-03-0597" ref-type="bibr">23</xref>)&#x0005D;, ATM &#x0005B;17 datasets; 13 studies (<xref rid="b13-ijo-55-03-0597" ref-type="bibr">13</xref>,<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>,<xref rid="b18-ijo-55-03-0597" ref-type="bibr">18</xref>,<xref rid="b20-ijo-55-03-0597" ref-type="bibr">20</xref>-<xref rid="b22-ijo-55-03-0597" ref-type="bibr">22</xref>,<xref rid="b24-ijo-55-03-0597" ref-type="bibr">24</xref>-<xref rid="b29-ijo-55-03-0597" ref-type="bibr">29</xref>)&#x0005D;, <italic>BRCA1</italic> &#x0005B;19 datasets; 14 studies (<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>,<xref rid="b18-ijo-55-03-0597" ref-type="bibr">18</xref>, <xref rid="b20-ijo-55-03-0597" ref-type="bibr">20</xref>-<xref rid="b22-ijo-55-03-0597" ref-type="bibr">22</xref>,<xref rid="b24-ijo-55-03-0597" ref-type="bibr">24</xref>,<xref rid="b25-ijo-55-03-0597" ref-type="bibr">25</xref>,<xref rid="b28-ijo-55-03-0597" ref-type="bibr">28</xref>,<xref rid="b30-ijo-55-03-0597" ref-type="bibr">30</xref>-<xref rid="b35-ijo-55-03-0597" ref-type="bibr">35</xref>)&#x0005D; and <italic>BRCA2</italic> &#x0005B;27 datasets; 19 studies (<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>,<xref rid="b18-ijo-55-03-0597" ref-type="bibr">18</xref>,<xref rid="b20-ijo-55-03-0597" ref-type="bibr">20</xref>-<xref rid="b26-ijo-55-03-0597" ref-type="bibr">26</xref>,<xref rid="b28-ijo-55-03-0597" ref-type="bibr">28</xref>,<xref rid="b30-ijo-55-03-0597" ref-type="bibr">30</xref>,<xref rid="b31-ijo-55-03-0597" ref-type="bibr">31</xref>,<xref rid="b33-ijo-55-03-0597" ref-type="bibr">33</xref>-<xref rid="b38-ijo-55-03-0597" ref-type="bibr">38</xref>)&#x0005D;. Other genes had between four and 11 datasets. For individual genes, the most common mutations were in <italic>ATM</italic> &#x0005B;median, 1.5-6% across prostate groups (general PC, mPC and mCRPC); full reported range, 0-12%&#x0005D;, <italic>BRCA2</italic> (median, 1.1-5.2% across prostate groups; full reported range, 0-11.8%), and <italic>PALB2</italic> (median, 0-4% across prostate groups; full reported range, 0-4%). The median prevalence of all MutL homolog 1 (<italic>MLH1</italic>), <italic>BRCA1</italic> and Fanconi anemia complementation group A (<italic>FANCA</italic>) mutations was &#x0003C;4%, and the median prevalence of all checkpoint kinase 2 (<italic>CHEK2</italic>), <italic>NBN</italic>, <italic>RAD51</italic> paralog C (<italic>RAD51C</italic>), ataxia telangiectasia and Rad3-related protein (<italic>ATR</italic>) and <italic>MRE11</italic> homolog A, double-strand break repair nuclease (<italic>MRE11A</italic>) mutations was &#x0003C;2%.</p>
<p>In unselected PC populations and datasets including &#x0003E;500 patients, the frequency of somatic mutations was higher than that of germline mutations in ATM (3.9% vs. 1.5%, respectively), <italic>ATR</italic> (0.6% vs. 0%), <italic>BRCA1</italic> (1.1% vs. 0.6%), <italic>BRCA2</italic> (4.9% vs. 1.1%), <italic>MLH1</italic> (0.6% vs. 0%), <italic>NBN</italic> (1.2% vs. 0.3%), <italic>PALB2</italic> (1.3% vs. 0.5%) and <italic>RAD51C</italic> (1.5% vs. 0.5%). By contrast, germline mutations were more common than somatic mutations in <italic>CHEK2</italic> (1.8% vs. 1.2%, respectively) and <italic>MRE11A</italic> (0.2% vs. 0%). In mCRPC, somatic mutations were more common than germline mutations for <italic>BRCA1</italic> (2.8% vs. 0.8%, respectively), whereas somatic and germline mutations were equally common for <italic>BRCA2</italic> (5% for each group). The prevalence rates for other prostate subgroups were based on &#x0003C;500 patients and were not summarized.</p>
<p>Germline mutations were more common in patients with mPC (based on datasets that included &#x0003E;500 patients) than in patients with general PC for <italic>ATM</italic> (1.7% vs. 1.5%, respectively), <italic>ATR</italic> (0.3% vs. 0%), <italic>BRCA1</italic> (0.9% vs. 0.6%) and <italic>BRCA2</italic> (5.2% vs. 1.1%), but not for <italic>CHEK2</italic> (1.5% vs. 1.8%), <italic>NBN</italic> (0.2% vs. 0.3%), <italic>PALB2</italic> (0.5% for both groups) or <italic>RAD51c</italic> (0.2% vs. 0.5%). Germline mutations were more common in mCRPC than in general PC for <italic>BRCA1</italic> (0.8% vs. 0.6%) and <italic>BRCA2</italic> (5.0% vs. 1.1%). Fewer than 500 patients were available for other prostate subgroups, and prevalence in those groups was therefore not summarized.</p>
<p>Somatic mutations were more common in the mCRPC population (based on datasets including &#x0003E;500 patients) than in the unselected PC population for <italic>BRCA1</italic> (2.8% vs. 1.1%), whereas similar rates of somatic mutations were seen in the two populations for <italic>BRCA2</italic> (5.0% vs. 4.9%).</p>
<p>The prevalence for DDR genes as a combined term was much higher than for the individual genes. This was expected, as the definition was based on the presence of multiple gene mutations (<xref rid="tIII-ijo-55-03-0597" ref-type="table">Table III</xref> and <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S8</xref>). In general PC, the prevalence of somatic DDR gene mutations was in the range of 4.9-22%, while germline DDR mutation rates ranged between 17.2 and 19%. In mPC, the prevalence of somatic DDR mutations ranged between 10 and 16.4%, while germline mutation rates ranged between 11.4 and 11.8%. In mCRPC, the prevalence of germline DDR mutations was in the range of 7.5-9.1%; no somatic mutations were reported. In general PC, based on datasets including &#x0003E;500 patients, germline mutations had a higher prevalence than somatic mutations (18.6% vs. 10.7%, respectively); other somatic subgroups included &#x0003C;500 patients, and so prevalence rates were not analyzed. Germline DDR mutation rates were higher in patients with general PC (18.6%) than in those with mPC (11.6%) or mCRPC (8.3%).</p>
<p>Two multinational studies (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>,<xref rid="b30-ijo-55-03-0597" ref-type="bibr">30</xref>) and one US study (<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>) reported the prevalence of mutations using definitions that combined germline and somatic variants (<xref rid="tIV-ijo-55-03-0597" ref-type="table">Table IV</xref>). These studies used different sequencing methods to investigate mutation rates in mCRPC (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>,<xref rid="b30-ijo-55-03-0597" ref-type="bibr">30</xref>) and general PC (<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>). Decker <italic>et al</italic> (<xref rid="b30-ijo-55-03-0597" ref-type="bibr">30</xref>) reported the prevalence for patients who had both somatic and germline mutations, whereas Robinson <italic>et al</italic> (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>) and Abida <italic>et al</italic> (<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>) reported the prevalence for patients who had either a somatic or a germline mutation (or both). Thus, the rates in the study of Robinson <italic>et al</italic> (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>) for <italic>BRCA1</italic> (2.67%) and <italic>BRCA2</italic> (12.67%) are approximately double those in the study of Decker <italic>et al</italic> (<xref rid="b30-ijo-55-03-0597" ref-type="bibr">30</xref>) (0.66 and 6%, respectively). The combined prevalence of germline and/or somatic DDR gene mutations was 22.67% in mCRPC (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>) and 27% in general PC (<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>).</p></sec>
<sec>
<title>Results for prevalence in the familial subgroup</title>
<p>The prevalence of <italic>BRCA2</italic> and DDR mutations in familial PC is summarized in <xref rid="f3-ijo-55-03-0597" ref-type="fig">Fig. 3</xref> and <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S4</xref>. The median prevalence of germline <italic>BRCA2</italic> mutations in the familial PC subgroup was 3.7% (range, 1.3-7.9%), based on six studies (n=945). While these studies reported variable definitions for familial PC, they generally required more than two family members with PC. Only one-half of the studies reported baseline characteristics (<xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S5</xref>); therefore, further analysis of the influence of baseline details was not possible. The median prevalence of germline <italic>BRCA2</italic> mutations (3.7%) was notably higher than that in the unselected population (1.1%).</p>
<p>The median prevalence of germline DDR mutations in familial PC was 29.3% (range, 7.3-91.67%), based on three studies (n=327). It is noteworthy that one other study (<xref rid="b39-ijo-55-03-0597" ref-type="bibr">39</xref>) provided two definitions for 'DNA damage response or androgen-signaling gene variants' (<xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S6</xref>); one definition referred to any affected gene (91.7%), whereas the other referred to two or more affected genes (41.7%). The inclusion of 'androgen-signaling gene variants' in the definition of DDR was inconsistent with the definitions of DDR in the other studies, and therefore this study was excluded from a sensitivity analysis, leading to a median prevalence of 12.1% (range, 7.3-16.9%).</p></sec></sec>
<sec sec-type="discussion">
<title>Discussion</title>
<p>To the best of our knowledge, this is the first review that has used rigorous systematic review methods (<xref rid="b8-ijo-55-03-0597" ref-type="bibr">8</xref>,<xref rid="b9-ijo-55-03-0597" ref-type="bibr">9</xref>) to report a comprehensive summary of recently published data on the prevalence of DDR genes in PC (including in mPC, mCRPC and selected subgroups).</p>
<p>The most common mutations (measured by median prevalence) in all unselected populations were <italic>ATM</italic>, <italic>BRCA2</italic> and <italic>PALB2</italic>. The highest median reported rates for germline mutations in <italic>BRCA2</italic> were found in mPC and mCRPC. The highest median reported rates for somatic mutations in mCRPC were found for <italic>ATM</italic> and <italic>BRCA2</italic>.</p>
<p>Overall, the median prevalence for DDR germline mutations was 18.6% in general PC (range, 17.2-19%; n=1,712), 11.6% in mPC (range, 11.4-11.8%; n=1,261), and 8.3% in mCRPC (range, 7.5-9.1%; n=738). The median prevalence for DDR somatic mutations was 10.7% in general PC (range, 4.9-22%; n=1,537) and 13.2% in mPC (range, 10-16.4%; n=105).</p>
<p>The prevalence for DDR germline and/or somatic mutations was 27% in general PC (<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>) and 22.67% in mCRPC (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>). The higher rate of 27% (<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>) for germline and/or somatic mutations in general PC may reflect the mixed population of the sample, which was predominantly metastatic rather than localized; it may also reflect differences in the genes included in the definition of 'DDR.' A recent study by Armenia <italic>et al</italic> (<xref rid="b40-ijo-55-03-0597" ref-type="bibr">40</xref>) (after the search dates of this review) reported a combined germline and somatic mutation rate of 27% for DDR genes in mCRPC. This rate is similar to those reported here. Differences in the precise rates for mCRPC reported by Armenia <italic>et al</italic> (<xref rid="b40-ijo-55-03-0597" ref-type="bibr">40</xref>) and Robinson <italic>et al</italic> (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>) could be due to variations in the genes included in the definition of 'DDR' or the use of different sequencing methods (next-generation sequencing vs. whole-exome sequencing). The median rate of germline <italic>BRCA2</italic> mutations in patients with familial PC history was 3.7%, higher than that in the equivalent unselected population (1.1%). Studies report that DDR pathways are good candidates for PC predisposition and that, although <italic>BRCA2</italic> is the most frequently mutated gene, a wider range of DDR genes are likely to predispose to PC (<xref rid="b41-ijo-55-03-0597" ref-type="bibr">41</xref>,<xref rid="b42-ijo-55-03-0597" ref-type="bibr">42</xref>).</p>
<p>These results should be interpreted with caution given the limited reporting of baseline characteristics and the heterogeneity of sequencing methods and mutational definitions. In particular, the patients included in the 'unselected PC' population varied widely. For example, unselected PC cases in Abida <italic>et al</italic> (<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>) represented a mixed population of cancer types (local and metastatic) dominated by metastatic samples (77%), whereas patients from the Cancer Genome Atlas (<xref rid="b18-ijo-55-03-0597" ref-type="bibr">18</xref>) were described as primary since they were derived from prostatectomies, but in fact included many high-grade cancers that were likely to be metastatic.</p>
<p>No other systematic reviews on the prevalence of DNA repair gene mutations and PC were identified. Two recent papers by Isaacsson Velho <italic>et al</italic> (<xref rid="b43-ijo-55-03-0597" ref-type="bibr">43</xref>) and Quigley <italic>et al</italic> (<xref rid="b44-ijo-55-03-0597" ref-type="bibr">44</xref>) identified similar mutational rates to those reported in this review. Isaacsson Velho <italic>et al</italic> (<xref rid="b43-ijo-55-03-0597" ref-type="bibr">43</xref>) found a germline mutational rate of <italic>BRCA2</italic> in mPC of 6%, compared with the median prevalence of 5.2% reported here. Quigley <italic>et al</italic> (<xref rid="b44-ijo-55-03-0597" ref-type="bibr">44</xref>) found germline and/or somatic <italic>BRCA2</italic> rates in mCRPC of 10%, compared with the rate of 12.7% (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>) reported here. It is likely that the differences in rates may be explained by differences in sequencing methodology, precise definitions of mutations, and/or differences in populations. Another recent paper (<xref rid="b45-ijo-55-03-0597" ref-type="bibr">45</xref>) used The Cancer Genome Atlas (<xref rid="b18-ijo-55-03-0597" ref-type="bibr">18</xref>) tissues and those reported by Armenia <italic>et al</italic> (<xref rid="b40-ijo-55-03-0597" ref-type="bibr">40</xref>) to investigate the influence of Gleason score and tumor stage. The overall prevalence of somatic DDR gene mutations in localized tumors was 8%, which is within the range reported here (4.9-22%). Marshall <italic>et al</italic> (<xref rid="b45-ijo-55-03-0597" ref-type="bibr">45</xref>) identified an increase in DDR mutation prevalence in patients with Gleason grade &#x02265;3 and clinical stage &#x02265;cT3 disease.</p>
<p>The findings of the present review provide evidence in support of the testing of DDR germline mutations in advanced disease, in line with NCCN and Philadelphia Prostate Cancer Consensus recommendations, and the St Gallen Advanced Prostate Cancer Consensus Conference 2017 (<xref rid="b5-ijo-55-03-0597" ref-type="bibr">5</xref>-<xref rid="b7-ijo-55-03-0597" ref-type="bibr">7</xref>). Some germline DDR mutations may present an increased healthcare burden, since family members may also be at risk of PC. Depending on which DDR gene mutations are present, family members may also have an increased risk of breast, ovarian, pancreatic and colorectal cancer, melanoma and other cancer types (<xref rid="b5-ijo-55-03-0597" ref-type="bibr">5</xref>). Given that somatic mutations were found to have a higher or similar prevalence compared with germline mutations in patients with mCRPC, somatic mutations may provide useful genetic information to guide participation in clinical trials or additional mutation testing. These findings support the testing of all patients with metastatic disease and not just those with familial disease. <italic>BRCA2</italic> was identified as having the highest mutation rate of any individual DDR gene, supporting the use <italic>BRCA2</italic> screening as recommended across all consensus conferences and NCCN (<xref rid="b5-ijo-55-03-0597" ref-type="bibr">5</xref>-<xref rid="b7-ijo-55-03-0597" ref-type="bibr">7</xref>).</p>
<p>Of note, some of the included studies provided limited baseline details. Where reported, there was evident heterogeneity in terms of the period of data collection, data sources, previous treatments, sequencing/screening methods and the risk of bias. Prevalence data based on low patient/study numbers combined with limited information about and/or variation in study characteristics prevented a thorough interrogation of the results, and the reasons for variation in prevalence could not always be determined. The repository data in many of the studies included in this review were unaccompanied by baseline patient details (<xref rid="b13-ijo-55-03-0597" ref-type="bibr">13</xref>), and the source of the samples was often mentioned only incidentally within the results. This hampered data extraction and increased the risk of double counting (using the same data source twice). For example, among the three sets of tissues analyzed in the 2016 report of Decker <italic>et al</italic> (<xref rid="b30-ijo-55-03-0597" ref-type="bibr">30</xref>), one was the same tumors used in the 2015 study of Robinson <italic>et al</italic> (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>). Despite this apparent overlap, the data presented in the two papers do not double count for any result presented. To avoid double counting, only original data were extracted from each paper. Study sizes were limited, and only eight studies included &#x0003E;500 participants (<xref rid="b20-ijo-55-03-0597" ref-type="bibr">20</xref>,<xref rid="b21-ijo-55-03-0597" ref-type="bibr">21</xref>,<xref rid="b25-ijo-55-03-0597" ref-type="bibr">25</xref>,<xref rid="b31-ijo-55-03-0597" ref-type="bibr">31</xref>,<xref rid="b32-ijo-55-03-0597" ref-type="bibr">32</xref>,<xref rid="b34-ijo-55-03-0597" ref-type="bibr">34</xref>,<xref rid="b36-ijo-55-03-0597" ref-type="bibr">36</xref>,<xref rid="b46-ijo-55-03-0597" ref-type="bibr">46</xref>).</p>
<p>Definitions for individual gene mutations or DDR combinations varied considerably from study to study. Sources of tissue varied (being either fresh or paraffin-embedded), as did methods of mutational analysis. Different DNA sequencing/screening methods used for the detection of DDR mutation may explain the variations observed in the prevalences reported; this was demonstrated by the two linked publications of Williams <italic>et al</italic> (<xref rid="b47-ijo-55-03-0597" ref-type="bibr">47</xref>) and Gao <italic>et al</italic> (<xref rid="b48-ijo-55-03-0597" ref-type="bibr">48</xref>). Both publications used the same 23 patients with PC, but reported using different techniques to identify <italic>BRCA1</italic> mutations. The first (<xref rid="b48-ijo-55-03-0597" ref-type="bibr">48</xref>) detected loss of heterozygosity, using PCR, at the <italic>BRCA1</italic> locus in 22% of samples, whereas the second paper (<xref rid="b47-ijo-55-03-0597" ref-type="bibr">47</xref>), using FISH, found that the loss was not in the <italic>BRCA1</italic> gene but was distal, and therefore reported a 0% prevalence. Small gene panels and circulating DNA analysis may have lower coverage of large tumor suppressor genes such as <italic>ATM</italic>, <italic>BRCA1</italic> and <italic>BRCA2</italic> compared to whole genome or whole exome sequencing.</p>
<p>Differences in the definitions of what is considered a mutation can also arise, such as the use of monoallelic versus biallelic approaches to categorizing DDR mutations compared with non-mutations. One study (<xref rid="b49-ijo-55-03-0597" ref-type="bibr">49</xref>) reported a comparison between DDR mutations (defined as biallelic mutations in DDR genes) compared with non-mutations (defined as wild-type or monoallelic mutations in DDR genes, which the authors considered non-deleterious). By contrast, all other studies (with one partial exception) reported any mutation in a DDR gene (whether it affected one or both alleles) as a <italic>bona fide</italic> DDR mutation. The exception involved a study (<xref rid="b13-ijo-55-03-0597" ref-type="bibr">13</xref>) that provided two definitions for DDR, alternately based on one or both alleles being defective.</p>
<p>The use of different reference genome builds as comparator sequences introduces uncertainty. It is standard practice to use such builds as normal comparator sequences in order to identify mutations, but these reference sequences may change over time (with improved methodologies), which may influence what is defined as a genuine mutation. The use of different sequencing depths introduces uncertainty for between-study comparisons. For example, studies that perform next-generation sequencing to an extended depth &#x0005B;e.g. x265 (<xref rid="b38-ijo-55-03-0597" ref-type="bibr">38</xref>)&#x0005D; may achieve more accurate sequencing (lower error rates) than studies that sequence to a relatively minimal depth &#x0005B;e.g. x100 (<xref rid="b27-ijo-55-03-0597" ref-type="bibr">27</xref>)&#x0005D;. The use of different frequency cut-off thresholds for the inclusion of mutations introduces uncertainty for between-study comparisons. For example, studies that apply a relatively high frequency threshold when analyzing exonic mutations (e.g. excluding mutations with frequencies &#x0003E;2% in the observed population) (<xref rid="b37-ijo-55-03-0597" ref-type="bibr">37</xref>) will include a larger pool of mutations than studies that apply a more restrictive frequency cutoff (e.g. excluding mutations with a population allele frequency &#x02265;0.5%) (<xref rid="b50-ijo-55-03-0597" ref-type="bibr">50</xref>).</p>
<p>There is a risk of sampling bias with somatic mutations, given that PC is a very heterogeneous disease (<xref rid="b51-ijo-55-03-0597" ref-type="bibr">51</xref>). This heterogeneity means that within a patient tumor there are multiple sub-tumors and normal tissues with different genotypes (different mutational profiles) or clones (<xref rid="b52-ijo-55-03-0597" ref-type="bibr">52</xref>,<xref rid="b53-ijo-55-03-0597" ref-type="bibr">53</xref>). For example, PC can have areas of moderately differentiated tumor and undifferentiated tumor, and each clone will have a different prognosis. Tumor heterogeneity impacts biomarker studies, since the sample taken for analysis may not be the same as the sample given to the pathologist, and false associations between biomarker and histological stage can arise. Any method other than micro-dissected tissue confirmed by a pathologist for tumor grade is at risk of sampling error.</p>
<p>In the present study, no prevalence data were available for CRPC populations with &#x0003E;50 participants. There was insufficient evidence to judge whether patterns of prevalence were influenced by the country of recruitment. While there was some evidence for all the DDR genes on which the study focused, evidence was particularly limited for <italic>ATR</italic>, <italic>FANCA</italic>, <italic>MLH1</italic> and <italic>MRE11A</italic>, as mutations in these genes were reported in five or fewer studies in total.</p>
<p>Future research should focus on other subgroups (including African-Americans, and young-onset, ductal and lethal prostate cancer) that may have DDR mutation prevalences that are different from that of the wider PC population. In addition, future work should consider the contribution of founder mutations in unselected populations and a consideration of mutations that are prevalent in other countries. A more focused review would be required to examine in detail whether mutations were pathogenic or were variants of uncertain significance.</p>
<p>In future research, authors should better clarify patient baseline characteristics, the diagnostic methods employed, and whether the somatic samples used for analysis were diagnosed directly or inferred from other pathology samples. Assessment of data according to cancer stage and grade rather than broad terms such as 'PC' may also be more useful. Definitions of what types of genetic changes constitute 'mutations' (e.g. single-copy deletion compared with homozygous deletion) need to be standardized, and pathogenic classification should be routinely incorporated into the reporting of mutations. Finally, reviews of biomarker studies need to consider the aforementioned scientific limitations of these studies, as well as study design limitations. Future guidelines/consensus are required for greater standardization of sequencing methods used for genetic association studies.</p>
<p>Given the generally poor quality and poor reporting of studies showing prevalence data, there is a need for future epidemiological studies that use recognized methodologies and reporting tools. Authors should be encouraged to adhere to the following reporting guidelines for prevalence studies: The Simon <italic>et al</italic> (<xref rid="b54-ijo-55-03-0597" ref-type="bibr">54</xref>) guidelines for the use of archived specimens in the evaluation of prognostic and predictive biomarkers; Biospecimen Reporting for Improved Study Quality (<xref rid="b55-ijo-55-03-0597" ref-type="bibr">55</xref>); Strengthening the Reporting of Genetic Association Studies, an extension of the STROBE statement (<xref rid="b56-ijo-55-03-0597" ref-type="bibr">56</xref>); and the Joanna Briggs Institute Critical Appraisal Checklist for Studies Reporting Prevalence Data (to reduce the risk of bias) (<xref rid="b10-ijo-55-03-0597" ref-type="bibr">10</xref>).</p>
<p>A number of recent updates (<xref rid="b5-ijo-55-03-0597" ref-type="bibr">5</xref>-<xref rid="b7-ijo-55-03-0597" ref-type="bibr">7</xref>) in clinical practice guidelines have followed the arrival of new types of genetic tests and ongoing clinical trials with drugs that specifically target germline and/or somatic DDR mutations in mCRPC. In the unselected PC population, the median prevalence of germline and/or somatic DDR mutations was 27%. In the mPC populations, the median rate of DDR mutations was 11.6% for germline mutations and 13.2% for somatic mutations. In mCRPC populations, the prevalence rate was 22.67% for germline and/or somatic mutations. In patients with a familial history of PC, the median rate of germline DDR mutations was 12.1% and the median rate of germline <italic>BRCA2</italic> mutations was 3.7%.</p>
<p>The present review highlighted variations in definitions and methodology among studies investigating biomarkers, including differences in tumor sampling, tumor heterogeneity, sequencing depth and mutational frequency thresholds, and comparability of mutational definitions (genetic terminology). Further large, well-reported prevalence studies in PC are needed to provide international prevalence data on the burden of DDR dysfunction in patients with PC.</p></sec>
<sec sec-type="other">
<title>Funding</title>
<p>The present study was sponsored by Pfizer, Inc.</p></sec>
<sec sec-type="materials">
<title>Availability of data and materials</title>
<p>All data analyzed during this study are included in this published article.</p></sec>
<sec sec-type="other">
<title>Authors' contributions</title>
<p>SHL, SLS, JK, RGWQ contributed to the conception and design, acquisition of data, analysis and interpretation of data. HW contributed to the acquisition of data, analysis and interpretation of data. KM designed and performed the search strategies. All authors contributed to the writing of the manuscript and its final approval.</p></sec>
<sec sec-type="other">
<title>Ethics approval and consent to participate</title>
<p>Not applicable.</p></sec>
<sec sec-type="other">
<title>Patient consent for publication</title>
<p>Not applicable.</p></sec>
<sec sec-type="other">
<title>Competing interests</title>
<p>SHL, SLS, HW, KM and JK are employees of Kleijnen Systematic Reviews Ltd., who were paid consultants to Pfizer, Inc. in connection with the development of this manuscript; they have no other competing interests. RGWQ is an employee of Pfizer, Inc..</p></sec>
<sec sec-type="supplementary-material">
<title>Supplementary Materials</title>
<supplementary-material id="SD1-ijo-55-03-0597" content-type="local-data">
<media xlink:href="Supplementary_Data.pdf" mimetype="application" mime-subtype="pdf"/></supplementary-material></sec></body>
<back>
<ack>
<title>Acknowledgments</title>
<p>Editorial and medical writing support was provided by Dr Ying Jean, Dr Gautam Bijur, Ms. Mary Kacillas and Mr. Joshua Safran, and was funded by Pfizer, Inc.</p></ack>
<glossary>
<title>Abbreviations</title>
<def-list>
<def-item>
<term id="G1">ATM</term>
<def>
<p>ataxia telangiectasia mutated</p></def></def-item>
<def-item>
<term id="G2"><italic>ATR</italic></term>
<def>
<p>ataxia telangiectasia and Rad3-related protein</p></def></def-item>
<def-item>
<term id="G3"><italic>BRCA</italic></term>
<def>
<p>breast cancer susceptibility gene</p></def></def-item>
<def-item>
<term id="G4">BRISQ</term>
<def>
<p>Biospecimen Reporting for Improved Study Quality</p></def></def-item>
<def-item>
<term id="G5"><italic>CHEK2</italic></term>
<def>
<p>checkpoint kinase 2</p></def></def-item>
<def-item>
<term id="G6">CRPC</term>
<def>
<p>castration-resistant prostate cancer</p></def></def-item>
<def-item>
<term id="G7">DDR</term>
<def>
<p>DNA damage response</p></def></def-item>
<def-item>
<term id="G8">ESMO</term>
<def>
<p>European Society for Medical Oncology</p></def></def-item>
<def-item>
<term id="G9"><italic>FANCA</italic></term>
<def>
<p>Fanconi anemia complementation group A</p></def></def-item>
<def-item>
<term id="G10">FISH</term>
<def>
<p>fluorescence <italic>in situ</italic> hybridization</p></def></def-item>
<def-item>
<term id="G11">mCRPC</term>
<def>
<p>metastatic castration-resistant prostate cancer</p></def></def-item>
<def-item>
<term id="G12"><italic>MLH1</italic></term>
<def>
<p>MutL homolog 1</p></def></def-item>
<def-item>
<term id="G13">mPC</term>
<def>
<p>metastatic prostate cancer</p></def></def-item>
<def-item>
<term id="G14"><italic>MRE11A</italic></term>
<def>
<p><italic>MRE11</italic> homolog A, double-strand break repair nuclease</p></def></def-item>
<def-item>
<term id="G15"><italic>NBN</italic></term>
<def>
<p>nibrin</p></def></def-item>
<def-item>
<term id="G16">NCCN</term>
<def>
<p>National Comprehensive Cancer Network</p></def></def-item>
<def-item>
<term id="G17">NR</term>
<def>
<p>not reported</p></def></def-item>
<def-item>
<term id="G18"><italic>PALB2</italic></term>
<def>
<p>partner and localizer of <italic>BRCA2</italic></p></def></def-item>
<def-item>
<term id="G19">PARP</term>
<def>
<p>poly (ADP)-ribose polymerase</p></def></def-item>
<def-item>
<term id="G20">PC</term>
<def>
<p>prostate cancer</p></def></def-item>
<def-item>
<term id="G21">PRISMA</term>
<def>
<p>Preferred Reporting Items for Systematic Reviews and Meta-analyses</p></def></def-item>
<def-item>
<term id="G22"><italic>RAD51C</italic></term>
<def>
<p><italic>RAD51</italic> paralog C</p></def></def-item>
<def-item>
<term id="G23">STREGA</term>
<def>
<p>Strengthening the Reporting of Genetic Association Studies</p></def></def-item>
<def-item>
<term id="G24">SUO</term>
<def>
<p>Society of Urologic Oncology</p></def></def-item></def-list></glossary>
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<floats-group>
<fig id="f1-ijo-55-03-0597" position="float">
<label>Figure 1</label>
<caption>
<p>Preferred Reporting Items for Systematic Reviews and Meta-analyses study flow diagram. DDR, DNA damage response; ESMO, European Society for Medical Oncology; NCCN, National Comprehensive Care Network; SUO, Society of Urologic Oncology.</p></caption>
<graphic xlink:href="IJO-55-03-0597-g00.jpg"/></fig>
<fig id="f2-ijo-55-03-0597" position="float">
<label>Figure 2</label>
<caption>
<p>Summary of median prevalence for germline (blue) and somatic (green) DDR gene mutations in unselected populations. Study numbers, median prevalence, range and original data are reported in <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S8</xref>. Data from studies with &#x0003E;50 patients are included. <italic>ATM</italic>, ataxia telangiectasia mutated; <italic>ATR</italic>, ataxia telangiectasia and Rad3-related protein; <italic>BRCA</italic>, breast cancer susceptibility gene; <italic>CHEK2</italic>, checkpoint kinase 2; DDR, DNA damage repair; <italic>FANCA</italic>, Fanconi anemia complementation group A; <italic>MLH1</italic>, MutL homolog 1; <italic>MRE11A</italic>, <italic>MRE11</italic> homolog A, double-strand break repair nuclease; <italic>NBN</italic>, nibrin; NR, not reported; <italic>PALB2</italic>, partner and localizer of <italic>BRCA2</italic>; <italic>RAD51C</italic>, <italic>RAD51</italic> paralog C; PC, prostate cancer; mPC, metastatic prostate cancer; mCRPC, metastatic castration-resistant prostate cancer.</p></caption>
<graphic xlink:href="IJO-55-03-0597-g01.jpg"/></fig>
<fig id="f3-ijo-55-03-0597" position="float">
<label>Figure 3</label>
<caption>
<p>Summary of median prevalences for DDR and <italic>BRCA2</italic> gene mutations in patients with familial prostate cancer. 'All <italic>BRCA2</italic>' and 'All DDR' signify all mutations identified for each gene, whereas 'specific <italic>BRCA2</italic>' signifies one specific mutation (e.g. a specific deletion) in the gene. Study numbers and <italic>BRCA2</italic>/DDR definitions are reported in <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Data S1</xref>, <xref ref-type="supplementary-material" rid="SD1-ijo-55-03-0597">Appendix S4</xref>. BRCA, breast cancer susceptibility gene; DDR, DNA damage repair.</p></caption>
<graphic xlink:href="IJO-55-03-0597-g02.jpg"/></fig>
<table-wrap id="tI-ijo-55-03-0597" position="float">
<label>Table I</label>
<caption>
<p>Study characteristics: Unselected populations.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th colspan="2" valign="top" align="left">PC group</th>
<th valign="top" align="center">Study ID</th>
<th valign="top" align="center">Other related publications</th>
<th valign="top" align="center">No. analyzed</th>
<th valign="top" align="center">Recruitment/enrollment dates</th>
<th valign="top" align="center">Place(s) of recruitment</th></tr></thead>
<tbody>
<tr>
<td colspan="2" valign="top" align="left">A, Canada</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Akbari <italic>et al</italic>, 2014 (<xref rid="b36-ijo-55-03-0597" ref-type="bibr">36</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">1904</td>
<td valign="top" align="left">June 1998-February 2010</td>
<td valign="top" align="left">Sunnybrook Health Sciences Center, Toronto, Canada; Princess Margaret Hospital, Toronto, Canada</td></tr>
<tr>
<td colspan="2" valign="top" align="left"/>
<td valign="top" align="left">Nam <italic>et al</italic>, 2005 (<xref rid="b57-ijo-55-03-0597" ref-type="bibr">57</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">996</td>
<td valign="top" align="left">June 1998-January 2003</td>
<td valign="top" align="left">Two prostate centers at the University of Toronto (University Health Network and Sunnybrook and Women's College Health Sciences Center)</td></tr>
<tr>
<td colspan="2" valign="top" align="left">mCRPC</td>
<td valign="top" align="left">Struss <italic>et al</italic>, 2017<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref>,(<xref rid="b23-ijo-55-03-0597" ref-type="bibr">23</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">319</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td colspan="2" valign="top" align="left">B, Denmark</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Naslund-Koch <italic>et al</italic>, 2016 (<xref rid="b58-ijo-55-03-0597" ref-type="bibr">58</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">39014</td>
<td valign="top" align="left">2003-2010</td>
<td valign="top" align="left">Copenhagen General Population Study</td></tr>
<tr>
<td colspan="2" valign="top" align="left">C, Germany</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Maier <italic>et al</italic>, 2014 (<xref rid="b37-ijo-55-03-0597" ref-type="bibr">37</xref>)</td>
<td valign="top" align="left">Maier 2010 (<xref rid="b59-ijo-55-03-0597" ref-type="bibr">59</xref>)</td>
<td valign="top" align="left">382; 92</td>
<td valign="top" align="left">1998-2007</td>
<td valign="top" align="left">Ulm, Germany</td></tr>
<tr>
<td colspan="2" valign="top" align="left">D, Israel</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Vazina <italic>et al</italic>, 2000 (<xref rid="b60-ijo-55-03-0597" ref-type="bibr">60</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">174</td>
<td valign="top" align="left">1998</td>
<td valign="top" align="left">Rabin Medical Center, Sheba Medical Center or Wolfson Medical Center</td></tr>
<tr>
<td colspan="2" valign="top" align="left">E, Japan</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Tanaka <italic>et al</italic>, 2009 (<xref rid="b61-ijo-55-03-0597" ref-type="bibr">61</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">177</td>
<td valign="top" align="left">1997-2003</td>
<td valign="top" align="left">Shimane Medical University, Izumo, Japan</td></tr>
<tr>
<td colspan="2" valign="top" align="left"/>
<td valign="top" align="left">Uchida <italic>et al</italic>, 1999 (<xref rid="b62-ijo-55-03-0597" ref-type="bibr">62</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">24</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">University of Kitasato Hospital, Sagamihara, Kanagawa, Japan</td></tr>
<tr>
<td colspan="2" valign="top" align="left">F, Spain</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td colspan="2" valign="top" align="left">mCRPC</td>
<td valign="top" align="left">Romero Laorden <italic>et al</italic>, 2017<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b22-ijo-55-03-0597" ref-type="bibr">22</xref>) NCT03075735 (PROREPAIR-B)</td>
<td valign="top" align="left">Cend&#x000F3;n Fl&#x000F3;rez <italic>et al</italic>, 2017 (<xref rid="b63-ijo-55-03-0597" ref-type="bibr">63</xref>); NCT3075735 (<xref rid="b64-ijo-55-03-0597" ref-type="bibr">64</xref>)</td>
<td valign="top" align="left">419</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">38 centers across Spain</td></tr>
<tr>
<td colspan="2" valign="top" align="left">G, UK</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Castro <italic>et al</italic>, 2011<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b31-ijo-55-03-0597" ref-type="bibr">31</xref>) UKGPCS</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">2181</td>
<td valign="top" align="left">1990-2005</td>
<td valign="top" align="left">UK Genetic Prostate Cancer Study (UKGPCS)</td></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Manson-Bahr <italic>et al</italic>, 2015 (<xref rid="b27-ijo-55-03-0597" ref-type="bibr">27</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">63</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Leongamornlert <italic>et al</italic>, 2012 (<xref rid="b32-ijo-55-03-0597" ref-type="bibr">32</xref>) UKGPCS</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">886</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">UK Genetic Prostate Cancer Study (UKGPCS)</td></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Angele <italic>et al</italic>, 2004 (<xref rid="b65-ijo-55-03-0597" ref-type="bibr">65</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">637</td>
<td valign="top" align="left">1993-2002</td>
<td valign="top" align="left">Royal Marsden NHS Trust</td></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Jefferies <italic>et al</italic>, 2017<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b14-ijo-55-03-0597" ref-type="bibr">14</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">61</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">Welsh Cancer Bank</td></tr>
<tr>
<td colspan="2" valign="top" align="left">H, USA</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Dawson <italic>et al</italic>, 2016<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b66-ijo-55-03-0597" ref-type="bibr">66</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">437</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td colspan="2" valign="top" align="left">PC</td>
<td valign="top" align="left">Nicolosi <italic>et al</italic>, 2017<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b19-ijo-55-03-0597" ref-type="bibr">19</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">1158</td>
<td valign="top" align="left">2013-2016</td>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Xia <italic>et al</italic>, 2015 (<xref rid="b67-ijo-55-03-0597" ref-type="bibr">67</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">20</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR; hospital-based registry</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Abida <italic>et al</italic>, 2017 (<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>)</td>
<td valign="top" align="left">Abida <italic>et al</italic>, 2015 (<xref rid="b68-ijo-55-03-0597" ref-type="bibr">68</xref>);</td>
<td valign="top" align="left">451</td>
<td valign="top" align="left">May 2015-unknown</td>
<td valign="top" align="left">Memorial Sloan Kettering Cancer Center, New York, USA</td></tr>
<tr>
<td valign="top" align="left"/>
<td colspan="2" valign="top" align="left"/>
<td valign="top" align="left">Abida <italic>et al</italic>, 2016 (<xref rid="b69-ijo-55-03-0597" ref-type="bibr">69</xref>);</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"/>
<td colspan="2" valign="top" align="left"/>
<td valign="top" align="left">Abida <italic>et al</italic>,2016 (<xref rid="b70-ijo-55-03-0597" ref-type="bibr">70</xref>);</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left"/>
<td colspan="2" valign="top" align="left"/>
<td valign="top" align="left">Cheng <italic>et al</italic>, 2017 (<xref rid="b71-ijo-55-03-0597" ref-type="bibr">71</xref>)</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Feldman <italic>et al</italic>, 2014<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b72-ijo-55-03-0597" ref-type="bibr">72</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">330</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">Large referral laboratory</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Myers <italic>et al</italic>, 2016<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b35-ijo-55-03-0597" ref-type="bibr">35</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">85</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Palapattu <italic>et al</italic>, 2015<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b73-ijo-55-03-0597" ref-type="bibr">73</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">9</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Browning <italic>et al</italic>, 2006 (<xref rid="b74-ijo-55-03-0597" ref-type="bibr">74</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">98</td>
<td valign="top" align="left">1997</td>
<td valign="top" align="left">Vanderbilt Hospital, USA</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Patel <italic>et al</italic>, 2016<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b29-ijo-55-03-0597" ref-type="bibr">29</xref>)</td>
<td valign="top" align="left">Patel <italic>et al</italic>, 2017 (<xref rid="b75-ijo-55-03-0597" ref-type="bibr">75</xref>)</td>
<td valign="top" align="left">327</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">Dana Farber Cancer Institute</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Lara <italic>et al</italic>, 2017<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b34-ijo-55-03-0597" ref-type="bibr">34</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">207; 936</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Evans <italic>et al</italic>, 2016 (<xref rid="b28-ijo-55-03-0597" ref-type="bibr">28</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">1090</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">Mayo Clinic, Cleveland Clinic, Thomas Jefferson University</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Wu <italic>et al</italic>, 2006 (<xref rid="b76-ijo-55-03-0597" ref-type="bibr">76</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">84</td>
<td valign="top" align="left">1997-1998</td>
<td valign="top" align="left">Mayo Clinic, USA</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Williams <italic>et al</italic>, 1996 (<xref rid="b47-ijo-55-03-0597" ref-type="bibr">47</xref>)</td>
<td valign="top" align="left">Gao <italic>et al</italic>, 1995 (<xref rid="b48-ijo-55-03-0597" ref-type="bibr">48</xref>)</td>
<td valign="top" align="left">23</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">University of Utah</td></tr>
<tr>
<td valign="top" align="left">Primary PC;</td>
<td colspan="2" valign="top" align="left">Grasso <italic>et al</italic>, 2012 (<xref rid="b26-ijo-55-03-0597" ref-type="bibr">26</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">11; 50</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">University of Michigan and from the Rapid Autopsy</td></tr>
<tr>
<td valign="top" align="left">mCRPC</td>
<td colspan="2" valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left">Program</td></tr>
<tr>
<td valign="top" align="left">Primary PC; mPC</td>
<td colspan="2" valign="top" align="left">Dall'Era <italic>et al</italic>, 2017<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b77-ijo-55-03-0597" ref-type="bibr">77</xref>)</td>
<td valign="top" align="left">Glass <italic>et al</italic>, 2017 (<xref rid="b78-ijo-55-03-0597" ref-type="bibr">78</xref>)</td>
<td valign="top" align="left">936</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td valign="top" align="left">Primary PC; mPC</td>
<td colspan="2" valign="top" align="left">Beltran <italic>et al</italic>, 2015 (<xref rid="b79-ijo-55-03-0597" ref-type="bibr">79</xref>)</td>
<td valign="top" align="left">Beltran <italic>et al</italic>, 2015 (<xref rid="b80-ijo-55-03-0597" ref-type="bibr">80</xref>)</td>
<td valign="top" align="left">69; 29</td>
<td valign="top" align="left">February 2013- September 2014</td>
<td valign="top" align="left">Weill Cornell Medical College&#x02013;New York Presbyterian Hospital</td></tr>
<tr>
<td valign="top" align="left">Primary PC; mPC;</td>
<td colspan="2" valign="top" align="left">Beltran <italic>et al</italic>, 2013 (<xref rid="b81-ijo-55-03-0597" ref-type="bibr">81</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">16; 4; 25</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">Weill Cornell Medical College</td></tr>
<tr>
<td valign="top" align="left">CRPC</td>
<td colspan="2" valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left">mCRPC</td>
<td colspan="2" valign="top" align="left">Gambhira <italic>et al</italic>, 2016<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b82-ijo-55-03-0597" ref-type="bibr">82</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">13</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td valign="top" align="left">mCRPC</td>
<td colspan="2" valign="top" align="left">Daniel <italic>et al</italic>, 2017<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b83-ijo-55-03-0597" ref-type="bibr">83</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">1911</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td valign="top" align="left">mPC</td>
<td colspan="2" valign="top" align="left">Pritchard <italic>et al</italic>, 2014 (<xref rid="b16-ijo-55-03-0597" ref-type="bibr">16</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">60</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">University of Washington Prostate Cancer Biorepository</td></tr>
<tr>
<td valign="top" align="left">mPC</td>
<td colspan="2" valign="top" align="left">Gourdin and Lilly 2016<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b15-ijo-55-03-0597" ref-type="bibr">15</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">55</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td valign="top" align="left">mPC</td>
<td colspan="2" valign="top" align="left">Robbins <italic>et al</italic>, 2011 (<xref rid="b84-ijo-55-03-0597" ref-type="bibr">84</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">8</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">Rapid Autopsy Program at the University of Michigan</td></tr>
<tr>
<td valign="top" align="left">I, Multi-national</td>
<td colspan="2" valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Fontugne <italic>et al</italic>, 2015<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b38-ijo-55-03-0597" ref-type="bibr">38</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">51</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">UK and USA</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Cancer Genome Atlas 2015 (<xref rid="b18-ijo-55-03-0597" ref-type="bibr">18</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">333</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">Multiple institutions (including Australia, Brazil, Israel, UK, USA)</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Lu <italic>et al</italic>, 2015 (<xref rid="b24-ijo-55-03-0597" ref-type="bibr">24</xref>) Cancer Genome Atlas</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">178</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR, but presumed to be multiple institutions (including Australia, Brazil, Israel, UK, USA) (<xref rid="b18-ijo-55-03-0597" ref-type="bibr">18</xref>)</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Timms <italic>et al</italic>, 2016<xref rid="tfn3-ijo-55-03-0597" ref-type="table-fn">c</xref> (<xref rid="b13-ijo-55-03-0597" ref-type="bibr">13</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">84</td>
<td valign="top" align="left">1990-2011</td>
<td valign="top" align="left">Transatlantic Prostate Group Cohort and commercial databank</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Hebbring <italic>et al</italic>, 2006 (<xref rid="b85-ijo-55-03-0597" ref-type="bibr">85</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">1819; 1218</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">USA (Johns Hopkins, Tampere University Hospital, University of Michigan, Mayo Clinic); Germany (Universit&#x000E4;tsklinikum Ulm)</td></tr>
<tr>
<td valign="top" align="left">PC; mCRPC</td>
<td colspan="2" valign="top" align="left">Decker <italic>et al</italic>, 2016 (<xref rid="b30-ijo-55-03-0597" ref-type="bibr">30</xref>)</td>
<td valign="top" align="left">Baca <italic>et al</italic>, 2013 (<xref rid="b86-ijo-55-03-0597" ref-type="bibr">86</xref>)</td>
<td valign="top" align="left">60; 150</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">Multiple institutions (including Australia, Brazil, Israel, UK, and USA); unclear for some institutions</td></tr>
<tr>
<td valign="top" align="left">Primary PC; mPC</td>
<td colspan="2" valign="top" align="left">Pritchard <italic>et al</italic>, 2016 (<xref rid="b21-ijo-55-03-0597" ref-type="bibr">21</xref>) Stand Up to Cancer-Prostate Cancer Foundation (SU2C-PCF) International Prostate Cancer Dream Team discovery series; MSK-IMPACT</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">499; 692</td>
<td valign="top" align="left">1997-2015 (multiple case series)</td>
<td valign="top" align="left">Royal Marsden Hospital (London, UK), University of Washington Rapid Autopsy Program (District of Columbia, USA), Weill Cornell Medical College (New York, USA), University of Michigan Rapid Autopsy Program (Michigan, USA), Memorial Sloan Kettering Cancer Center (New York, USA); 144 international centers (SU2C-PCF)</td></tr>
<tr>
<td valign="top" align="left">mCRPC</td>
<td colspan="2" valign="top" align="left">Robinson <italic>et al</italic>, 2015 (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">150</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">8 centers, including University of Michigan Medical School, University of Washington, Dana-Farber Cancer Institute, Memorial Sloan Kettering Cancer Center, Royal Marsden Institute of Cancer Research (London). Karmanos Cancer Institute, Beth Israel Deaconess Medical Center, Harvard Medical School, and Weill-Cornell</td></tr>
<tr>
<td valign="top" align="left">mPC</td>
<td colspan="2" valign="top" align="left">Nelson <italic>et al</italic>, 2016<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b20-ijo-55-03-0597" ref-type="bibr">20</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">569</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR but includes UK and USA</td></tr>
<tr>
<td valign="top" align="left">J, Country not reported</td>
<td colspan="2" valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left">PC</td>
<td colspan="2" valign="top" align="left">Liu <italic>et al</italic>, 2016<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b87-ijo-55-03-0597" ref-type="bibr">87</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">36</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td valign="top" align="left">mCRPC</td>
<td colspan="2" valign="top" align="left">Sonpavde <italic>et al</italic>, 2017<xref rid="tfn1-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b33-ijo-55-03-0597" ref-type="bibr">33</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">514</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr></tbody></table>
<table-wrap-foot><fn id="tfn1-ijo-55-03-0597">
<label>a</label>
<p>Abstract;</p></fn><fn id="tfn2-ijo-55-03-0597">
<label>b</label>
<p>letter;</p></fn><fn id="tfn3-ijo-55-03-0597">
<label>c</label>
<p>poster.</p></fn><fn id="tfn4-ijo-55-03-0597">
<p>Note that some unselected populations could also present data for the selected populations. CRPC, castration resistant prostate cancer; mCRPC, metastatic castration resistant prostate cancer; mPC, metastatic prostate cancer; NR, not reported; PC, prostate cancer.</p></fn></table-wrap-foot></table-wrap>
<table-wrap id="tII-ijo-55-03-0597" position="float">
<label>Table II</label>
<caption>
<p>Study characteristics: Selected familial subgroups.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">PC group</th>
<th valign="top" align="center">Study ID</th>
<th valign="top" align="center">Other related publications</th>
<th valign="top" align="center">No. analyzed</th>
<th valign="top" align="center">Recruitment/enrollment dates</th>
<th valign="top" align="center">Place(s) of recruitment</th></tr></thead>
<tbody>
<tr>
<td valign="top" align="left">A, Australia</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left">PC</td>
<td valign="top" align="left">Cheng <italic>et al</italic>, 2011<xref rid="tfn5-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b88-ijo-55-03-0597" ref-type="bibr">88</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">147</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td valign="top" align="left">B, Germany</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left">PC</td>
<td valign="top" align="left">Maier <italic>et al</italic>, 2014 (<xref rid="b37-ijo-55-03-0597" ref-type="bibr">37</xref>)</td>
<td valign="top" align="left">Maier <italic>et al</italic>, 2010 (<xref rid="b59-ijo-55-03-0597" ref-type="bibr">59</xref>)</td>
<td valign="top" align="left">382; 92</td>
<td valign="top" align="left">1998-2007</td>
<td valign="top" align="left">Ulm, Germany</td></tr>
<tr>
<td valign="top" align="left">C, Japan</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left">PC</td>
<td valign="top" align="left">Hayano <italic>et al</italic>, 2016 (<xref rid="b42-ijo-55-03-0597" ref-type="bibr">42</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">140</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">Gunma University Hospital and its affiliated hospitals, Japan</td></tr>
<tr>
<td valign="top" align="left">D, UK</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left">PC</td>
<td valign="top" align="left">Gayther <italic>et al</italic>, 2000 (<xref rid="b89-ijo-55-03-0597" ref-type="bibr">89</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">38</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">UK</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td valign="top" align="left">Leongamornlert <italic>et al</italic>, 2014 (<xref rid="b41-ijo-55-03-0597" ref-type="bibr">41</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">191</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">UK Genetic Prostate Cancer Study (UKGPCS)</td></tr>
<tr>
<td valign="top" align="left">E, USA</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left">PC</td>
<td valign="top" align="left">Zuhlke <italic>et al</italic>, 2012 (<xref rid="b90-ijo-55-03-0597" ref-type="bibr">90</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">94</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">University of Michigan Prostate Cancer Genetics Project and Johns Hopkins University</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td valign="top" align="left">LaDuca <italic>et al</italic>, 2017<xref rid="tfn5-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b91-ijo-55-03-0597" ref-type="bibr">91</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">Not clear-patients referred from unknown centers</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td valign="top" align="left">Ledet <italic>et al</italic>, 2017<xref rid="tfn5-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b92-ijo-55-03-0597" ref-type="bibr">92</xref>)</td>
<td valign="top" align="left">Lin <italic>et al</italic>, 2017 (<xref rid="b93-ijo-55-03-0597" ref-type="bibr">93</xref>)</td>
<td valign="top" align="left">124</td>
<td valign="top" align="left">2015-2016</td>
<td valign="top" align="left">Tulane Cancer Center</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td valign="top" align="left">Nicolas <italic>et al</italic>, 2015 (<xref rid="b39-ijo-55-03-0597" ref-type="bibr">39</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">12</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">Fox Chase Cancer Center</td></tr>
<tr>
<td valign="top" align="left">PC</td>
<td valign="top" align="left">Marshall <italic>et al</italic>, 2017<xref rid="tfn5-ijo-55-03-0597" ref-type="table-fn">a</xref> (<xref rid="b94-ijo-55-03-0597" ref-type="bibr">94</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">92</td>
<td valign="top" align="left">August 2013- September 2016</td>
<td valign="top" align="left">NR</td></tr>
<tr>
<td valign="top" align="left">F, Multi-national</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/></tr>
<tr>
<td valign="top" align="left">PC</td>
<td valign="top" align="left">Hebbring <italic>et al</italic>, 2006 (<xref rid="b85-ijo-55-03-0597" ref-type="bibr">85</xref>)</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">1819; 1218</td>
<td valign="top" align="left">NR</td>
<td valign="top" align="left">USA (Johns Hopkins, Tampere University Hospital, University of Michigan, Mayo Clinic); Germany (Universit&#x000E4;tsklinikum Ulm)</td></tr></tbody></table>
<table-wrap-foot><fn id="tfn5-ijo-55-03-0597">
<label>a</label>
<p>Abstract. NR, not reported; PC, prostate cancer.</p></fn></table-wrap-foot></table-wrap>
<table-wrap id="tIII-ijo-55-03-0597" position="float">
<label>Table III</label>
<caption>
<p>DDR genes of interest analyzed.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">Author, year</th>
<th valign="top" align="left">Germline or somatic mutation</th>
<th valign="top" align="left"><italic>ATM</italic></th>
<th valign="top" align="left"><italic>ATR</italic></th>
<th valign="top" align="left"><italic>BRCA1</italic></th>
<th valign="top" align="left"><italic>BRCA2</italic></th>
<th valign="top" align="left"><italic>CHEK2</italic></th>
<th valign="top" align="left"><italic>FANCA</italic></th>
<th valign="top" align="left"><italic>MLH1</italic></th>
<th valign="top" align="left"><italic>MRE11A</italic></th>
<th valign="top" align="left"><italic>NBN</italic></th>
<th valign="top" align="left"><italic>PALB2</italic></th>
<th valign="top" align="left"><italic>RAD51C</italic></th>
<th valign="top" align="left">Other DDR genes</th>
<th valign="top" align="center">Refs.</th></tr></thead>
<tbody>
<tr>
<td valign="top" align="left">A, Australia</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Cheng <italic>et al</italic>, 2011</td>
<td valign="top" align="left">NR/unclear</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b88-ijo-55-03-0597" ref-type="bibr">88</xref>)</td></tr>
<tr>
<td valign="top" align="left">B, Canada</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Nam <italic>et al</italic>, 2005</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b57-ijo-55-03-0597" ref-type="bibr">57</xref>)</td></tr>
<tr>
<td valign="top" align="left">Tischkowitz <italic>et al</italic>, 2008</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b95-ijo-55-03-0597" ref-type="bibr">95</xref>)</td></tr>
<tr>
<td valign="top" align="left">Akbari <italic>et al</italic>, 2014</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b36-ijo-55-03-0597" ref-type="bibr">36</xref>)</td></tr>
<tr>
<td valign="top" align="left">Hamel <italic>et al</italic>, 2003</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b96-ijo-55-03-0597" ref-type="bibr">96</xref>)</td></tr>
<tr>
<td valign="top" align="left">Struss <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="center">(<xref rid="b23-ijo-55-03-0597" ref-type="bibr">23</xref>)</td></tr>
<tr>
<td valign="top" align="left">Damaraju <italic>et al</italic>, 2006</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b97-ijo-55-03-0597" ref-type="bibr">97</xref>)</td></tr>
<tr>
<td valign="top" align="left">C, Denmark</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Naslund Koch <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b58-ijo-55-03-0597" ref-type="bibr">58</xref>)</td></tr>
<tr>
<td valign="top" align="left">D, Germany</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Maier <italic>et al</italic>, 2014</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b37-ijo-55-03-0597" ref-type="bibr">37</xref>)</td></tr>
<tr>
<td valign="top" align="left">Meyer <italic>et al</italic>, 2007</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b98-ijo-55-03-0597" ref-type="bibr">98</xref>)</td></tr>
<tr>
<td valign="top" align="left">Nientiedt <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b99-ijo-55-03-0597" ref-type="bibr">99</xref>)</td></tr>
<tr>
<td valign="top" align="left">E, Israel</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Vazina <italic>et al</italic>, 2000</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b60-ijo-55-03-0597" ref-type="bibr">60</xref>)</td></tr>
<tr>
<td valign="top" align="left">Hubert <italic>et al</italic>, 1999</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b100-ijo-55-03-0597" ref-type="bibr">100</xref>)</td></tr>
<tr>
<td valign="top" align="left">Giusti <italic>et al</italic>, 2003</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b101-ijo-55-03-0597" ref-type="bibr">101</xref>)</td></tr>
<tr>
<td valign="top" align="left">F, Japan</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Hayano <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b42-ijo-55-03-0597" ref-type="bibr">42</xref>)</td></tr>
<tr>
<td valign="top" align="left">Tanaka <italic>et al</italic>, 2009</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b61-ijo-55-03-0597" ref-type="bibr">61</xref>)</td></tr>
<tr>
<td valign="top" align="left">Uchida <italic>et al</italic>, 1999</td>
<td valign="top" align="left">NR/unclear</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b62-ijo-55-03-0597" ref-type="bibr">62</xref>)</td></tr>
<tr>
<td valign="top" align="left">G, Spain</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Romero <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b22-ijo-55-03-0597" ref-type="bibr">22</xref>)</td></tr>
<tr>
<td valign="top" align="left">H, UK</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Kote-Jarai <italic>et al</italic>, 2011</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b102-ijo-55-03-0597" ref-type="bibr">102</xref>)</td></tr>
<tr>
<td valign="top" align="left">Edwards <italic>et al</italic>, 2003</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b103-ijo-55-03-0597" ref-type="bibr">103</xref>)</td></tr>
<tr>
<td valign="top" align="left">Leongamornlert <italic>et al</italic>, 2012</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b32-ijo-55-03-0597" ref-type="bibr">32</xref>)</td></tr>
<tr>
<td valign="top" align="left">Castro <italic>et al</italic>, 2011</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b31-ijo-55-03-0597" ref-type="bibr">31</xref>)</td></tr>
<tr>
<td valign="top" align="left">Gayther <italic>et al</italic>, 2000</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b89-ijo-55-03-0597" ref-type="bibr">89</xref>)</td></tr>
<tr>
<td valign="top" align="left">Angele <italic>et al</italic>, 2004</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b65-ijo-55-03-0597" ref-type="bibr">65</xref>)</td></tr>
<tr>
<td valign="top" align="left">Leongamornlert <italic>et al</italic>, 2014</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b41-ijo-55-03-0597" ref-type="bibr">41</xref>)</td></tr>
<tr>
<td valign="top" align="left">Jefferies <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="center">(<xref rid="b14-ijo-55-03-0597" ref-type="bibr">14</xref>)</td></tr>
<tr>
<td valign="top" align="left">Manson-Bahr <italic>et al</italic>, 2015</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b27-ijo-55-03-0597" ref-type="bibr">27</xref>)</td></tr>
<tr>
<td valign="top" align="left">I, USA</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Agalliu <italic>et al</italic>, 2007</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b104-ijo-55-03-0597" ref-type="bibr">104</xref>)</td></tr>
<tr>
<td valign="top" align="left">Gallagher <italic>et al</italic>, 2012</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b105-ijo-55-03-0597" ref-type="bibr">105</xref>)</td></tr>
<tr>
<td valign="top" align="left">Agalliu <italic>et al</italic>, 2009</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b106-ijo-55-03-0597" ref-type="bibr">106</xref>)</td></tr>
<tr>
<td valign="top" align="left">Kirchoff <italic>et al</italic>, 2004</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b107-ijo-55-03-0597" ref-type="bibr">107</xref>)</td></tr>
<tr>
<td valign="top" align="left">Lehrer <italic>et al</italic>, 1998</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b108-ijo-55-03-0597" ref-type="bibr">108</xref>)</td></tr>
<tr>
<td valign="top" align="left">Petrovics <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b46-ijo-55-03-0597" ref-type="bibr">46</xref>)</td></tr>
<tr>
<td valign="top" align="left">Nicolosi <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="center">(<xref rid="b19-ijo-55-03-0597" ref-type="bibr">19</xref>)</td></tr>
<tr>
<td valign="top" align="left">Cesaretti <italic>et al</italic>, 2007</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b109-ijo-55-03-0597" ref-type="bibr">109</xref>)</td></tr>
<tr>
<td valign="top" align="left">Browning <italic>et al</italic>, 2006</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b74-ijo-55-03-0597" ref-type="bibr">74</xref>)</td></tr>
<tr>
<td valign="top" align="left">Zhu <italic>et al</italic>, 2010</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b110-ijo-55-03-0597" ref-type="bibr">110</xref>)</td></tr>
<tr>
<td valign="top" align="left">Pomerantz <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b111-ijo-55-03-0597" ref-type="bibr">111</xref>)</td></tr>
<tr>
<td valign="top" align="left">Marshall <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b94-ijo-55-03-0597" ref-type="bibr">94</xref>)</td></tr>
<tr>
<td valign="top" align="left">Ledet <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b92-ijo-55-03-0597" ref-type="bibr">92</xref>)</td></tr>
<tr>
<td valign="top" align="left">LaDuca <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b91-ijo-55-03-0597" ref-type="bibr">91</xref>)</td></tr>
<tr>
<td valign="top" align="left">Hart <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b112-ijo-55-03-0597" ref-type="bibr">112</xref>)</td></tr>
<tr>
<td valign="top" align="left">Antonarakis <italic>et al</italic>, 2018</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b113-ijo-55-03-0597" ref-type="bibr">113</xref>)</td></tr>
<tr>
<td valign="top" align="left">Nicolas <italic>et al</italic>, 2015</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b39-ijo-55-03-0597" ref-type="bibr">39</xref>)</td></tr>
<tr>
<td valign="top" align="left">Beltran <italic>et al</italic>, 2015</td>
<td valign="top" align="left">Germline and somatic (mixed)</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b79-ijo-55-03-0597" ref-type="bibr">79</xref>)</td></tr>
<tr>
<td valign="top" align="left">Wu <italic>et al</italic>, 2006</td>
<td valign="top" align="left">Germline and somatic (mixed)</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b76-ijo-55-03-0597" ref-type="bibr">76</xref>)</td></tr>
<tr>
<td valign="top" align="left">Abida <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Germline and somatic (mixed)</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>)</td></tr>
<tr>
<td valign="top" align="left">Zuhlke <italic>et al</italic>, 2012</td>
<td valign="top" align="left">NR/unclear</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b90-ijo-55-03-0597" ref-type="bibr">90</xref>)</td></tr>
<tr>
<td valign="top" align="left">Nastiuk <italic>et al</italic>, 1999</td>
<td valign="top" align="left">NR/unclear</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b114-ijo-55-03-0597" ref-type="bibr">114</xref>)</td></tr>
<tr>
<td valign="top" align="left">Daniel <italic>et al</italic>, 2017</td>
<td valign="top" align="left">NR/unclear</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="center">(<xref rid="b83-ijo-55-03-0597" ref-type="bibr">83</xref>)</td></tr>
<tr>
<td valign="top" align="left">Feldman <italic>et al</italic>, 2014</td>
<td valign="top" align="left">NR/unclear</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="center">(<xref rid="b72-ijo-55-03-0597" ref-type="bibr">72</xref>)</td></tr>
<tr>
<td valign="top" align="left">Dawson <italic>et al</italic>, 2016</td>
<td valign="top" align="left">NR/unclear</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b66-ijo-55-03-0597" ref-type="bibr">66</xref>)</td></tr>
<tr>
<td valign="top" align="left">Dall'Era <italic>et al</italic>, 2017</td>
<td valign="top" align="left">NR/unclear</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b77-ijo-55-03-0597" ref-type="bibr">77</xref>)</td></tr>
<tr>
<td valign="top" align="left">Williams <italic>et al</italic>, 1996</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b47-ijo-55-03-0597" ref-type="bibr">47</xref>)</td></tr>
<tr>
<td valign="top" align="left">Myers <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b35-ijo-55-03-0597" ref-type="bibr">35</xref>)</td></tr>
<tr>
<td valign="top" align="left">Palapattu <italic>et al</italic>, 2015</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="center">(<xref rid="b73-ijo-55-03-0597" ref-type="bibr">73</xref>)</td></tr>
<tr>
<td valign="top" align="left">Robbins <italic>et al</italic>, 2011</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b84-ijo-55-03-0597" ref-type="bibr">84</xref>)</td></tr>
<tr>
<td valign="top" align="left">Pritchard <italic>et al</italic>, 2014</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b16-ijo-55-03-0597" ref-type="bibr">16</xref>)</td></tr>
<tr>
<td valign="top" align="left">Evans <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b28-ijo-55-03-0597" ref-type="bibr">28</xref>)</td></tr>
<tr>
<td valign="top" align="left">Schweizer <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b115-ijo-55-03-0597" ref-type="bibr">115</xref>)</td></tr>
<tr>
<td valign="top" align="left">Lara <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="center">(<xref rid="b34-ijo-55-03-0597" ref-type="bibr">34</xref>)</td></tr>
<tr>
<td valign="top" align="left">Grasso <italic>et al</italic>, 2012</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b26-ijo-55-03-0597" ref-type="bibr">26</xref>)</td></tr>
<tr>
<td valign="top" align="left">Gourdin <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">?</td>
<td valign="top" align="center">(<xref rid="b15-ijo-55-03-0597" ref-type="bibr">15</xref>)</td></tr>
<tr>
<td valign="top" align="left">Gambhira <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b82-ijo-55-03-0597" ref-type="bibr">82</xref>)</td></tr>
<tr>
<td valign="top" align="left">Patel <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b29-ijo-55-03-0597" ref-type="bibr">29</xref>)</td></tr>
<tr>
<td valign="top" align="left">Xia <italic>et al</italic>, 2015</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b67-ijo-55-03-0597" ref-type="bibr">67</xref>)</td></tr>
<tr>
<td valign="top" align="left">Beltran <italic>et al</italic>, 2013</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b81-ijo-55-03-0597" ref-type="bibr">81</xref>)</td></tr>
<tr>
<td valign="top" align="left">J, Multi-national</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Na <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b25-ijo-55-03-0597" ref-type="bibr">25</xref>)</td></tr>
<tr>
<td valign="top" align="left">Pritchard <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b21-ijo-55-03-0597" ref-type="bibr">21</xref>)</td></tr>
<tr>
<td valign="top" align="left">Nelson <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Germline</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b20-ijo-55-03-0597" ref-type="bibr">20</xref>)</td></tr>
<tr>
<td valign="top" align="left">Decker <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Germline and somatic (mixed)</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b30-ijo-55-03-0597" ref-type="bibr">30</xref>)</td></tr>
<tr>
<td valign="top" align="left">Robinson <italic>et al</italic>, 2015</td>
<td valign="top" align="left">Germline and somatic (mixed)</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>)</td></tr>
<tr>
<td valign="top" align="left">Lu <italic>et al</italic>, 2015</td>
<td valign="top" align="left">Germline and somatic (mixed)</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b24-ijo-55-03-0597" ref-type="bibr">24</xref>)</td></tr>
<tr>
<td valign="top" align="left">Hebbring <italic>et al</italic>, 2006</td>
<td valign="top" align="left">NR/unclear</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="left">No</td>
<td valign="top" align="center">(<xref rid="b85-ijo-55-03-0597" ref-type="bibr">85</xref>)</td></tr>
<tr>
<td valign="top" align="left">Fontugne <italic>et al</italic>, 2015</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b38-ijo-55-03-0597" ref-type="bibr">38</xref>)</td></tr>
<tr>
<td valign="top" align="left">The Cancer Genome</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b18-ijo-55-03-0597" ref-type="bibr">18</xref>)</td></tr>
<tr>
<td valign="top" align="left">Atlas, 2015</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Timms <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="center">(<xref rid="b13-ijo-55-03-0597" ref-type="bibr">13</xref>)</td></tr>
<tr>
<td valign="top" align="left">K, NR</td>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Stephens <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="center">(<xref rid="b116-ijo-55-03-0597" ref-type="bibr">116</xref>)</td></tr>
<tr>
<td valign="top" align="left">Sonpavde <italic>et al</italic>, 2017</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="center">(<xref rid="b33-ijo-55-03-0597" ref-type="bibr">33</xref>)</td></tr>
<tr>
<td valign="top" align="left">Liu <italic>et al</italic>, 2016</td>
<td valign="top" align="left">Somatic</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">Yes</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="left">?</td>
<td valign="top" align="center">(<xref rid="b87-ijo-55-03-0597" ref-type="bibr">87</xref>)</td></tr></tbody></table>
<table-wrap-foot><fn id="tfn6-ijo-55-03-0597">
<p>?, unclear; <italic>ATM</italic>, ataxia telangiectasia mutated; <italic>ATR</italic>, ataxia telangiectasia and Rad3-related protein; <italic>BRCA</italic>, breast cancer susceptibility gene; <italic>CHEK2</italic>, checkpoint kinase 2; DDR, DNA damage repair; <italic>FANCA</italic>, Fanconi anemia complementation group A; <italic>MLH1</italic>, MutL homolog 1, <italic>MRE11A, MRE11</italic> homolog A, double-strand break repair nuclease; <italic>NBN</italic>, nibrin; NR, not reported; <italic>PALB2</italic>, partner and localizer of <italic>BRCA2; RAD51C, RAD51</italic> paralog C.</p></fn></table-wrap-foot></table-wrap>
<table-wrap id="tIV-ijo-55-03-0597" position="float">
<label>Table IV</label>
<caption>
<p>Summary of DDR gene mutation prevalence in combined definitions for germline and/or somatic tissues.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">Author, year</th>
<th valign="top" align="center">Study information</th>
<th valign="top" align="center">Definition of combined germline and somatic</th>
<th valign="top" align="center">Method of mutation identification</th>
<th valign="top" align="center">Inclusion criteria</th>
<th valign="top" align="center">Gene</th>
<th valign="top" align="center">Gene definition</th>
<th valign="top" align="center">No. of patients</th>
<th valign="top" align="center">% prevalence</th>
<th valign="top" align="center">Refs.</th></tr></thead>
<tbody>
<tr>
<td valign="top" align="left">Decker <italic>et al</italic>, 2016</td>
<td valign="top" align="left">mCRPC; Multi-national</td>
<td valign="top" align="left">Patients who had both germline and somatic mutations</td>
<td valign="top" align="left">Whole- genome sequencing</td>
<td valign="top" align="left">Discovery set PC patients were selected based on high Gleason score and availability of both peripheral blood DNA and fresh frozen prostatectomy samples. 150 samples from Robinson 2015 (<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>).</td>
<td valign="top" align="left"><italic>BRCA2</italic></td>
<td valign="top" align="left">Biallelic mutation</td>
<td valign="top" align="left">150</td>
<td valign="top" align="left">6</td>
<td valign="top" align="center">(<xref rid="b30-ijo-55-03-0597" ref-type="bibr">30</xref>)</td></tr>
<tr>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"/>
<td valign="top" align="left"><italic>BRCA1</italic></td>
<td valign="top" align="left">Ballelic loss</td>
<td valign="top" align="left">150</td>
<td valign="top" align="left">0.66</td>
<td valign="top" align="center"/></tr>
<tr>
<td valign="top" align="left">Abida <italic>et al</italic>, 2017</td>
<td valign="top" align="left">PC; USA</td>
<td valign="top" align="left">Patients who had either germline or somatic or both mutations</td>
<td valign="top" align="left">Next- generation sequencing</td>
<td valign="top" align="left">Mixed population of locoregional (n=50), biochemically recurrent (n=53), and metastatic (n=348). 221 samples were included of unclear pathology, including 124 samples from Pritchard 2016 (<xref rid="b21-ijo-55-03-0597" ref-type="bibr">21</xref>).</td>
<td valign="top" align="left">DDR</td>
<td valign="top" align="left">Alterations of <italic>BRCA2, BRCA1</italic>, <italic>ATM, CHEK2</italic></td>
<td valign="top" align="left">221</td>
<td valign="top" align="left">27</td>
<td valign="top" align="center">(<xref rid="b17-ijo-55-03-0597" ref-type="bibr">17</xref>)</td></tr>
<tr>
<td rowspan="8" valign="top" align="left">Robinson <italic>et al</italic>, 2015</td>
<td rowspan="8" valign="top" align="left">mCRPC; Multi-national</td>
<td rowspan="8" valign="top" align="left">Patients who had either germline or somatic or both mutations</td>
<td rowspan="8" valign="top" align="left">Whole-exome sequencing</td>
<td rowspan="8" valign="top" align="left">Affected individuals who had metastatic disease accessible by image-guided biopsy and were being considered for abiraterone acetate or enzalutamide as standard of care or as part of a clinical trial were considered for enrollment</td>
<td valign="top" align="left"><italic>ATM</italic></td>
<td valign="top" align="left"><italic>ATM</italic> mutations (total)</td>
<td valign="top" align="left">150</td>
<td valign="top" align="left">5.33</td>
<td rowspan="8" valign="top" align="center">(<xref rid="b4-ijo-55-03-0597" ref-type="bibr">4</xref>)</td></tr>
<tr>
<td valign="top" align="left"><italic>BRCA2</italic></td>
<td valign="top" align="left">Loss of <italic>BRCA2</italic></td>
<td valign="top" align="left">150</td>
<td valign="top" align="left">12.67</td></tr>
<tr>
<td valign="top" align="left"><italic>BRCA1</italic></td>
<td valign="top" align="left"><italic>BRCA1</italic> mutations (total)</td>
<td valign="top" align="left">150</td>
<td valign="top" align="left">2.67</td></tr>
<tr>
<td valign="top" align="left"><italic>CHEK2</italic></td>
<td valign="top" align="left"><italic>CHEK2</italic> mutations (total)</td>
<td valign="top" align="left">150</td>
<td valign="top" align="left">3.33</td></tr>
<tr>
<td valign="top" align="left"><italic>FANCA</italic></td>
<td valign="top" align="left"><italic>FANCA</italic> mutations (total)</td>
<td valign="top" align="left">150</td>
<td valign="top" align="left">0.67</td></tr>
<tr>
<td valign="top" align="left"><italic>MLH1</italic></td>
<td valign="top" align="left"><italic>MLH1</italic> mutations (total)</td>
<td valign="top" align="left">150</td>
<td valign="top" align="left">2.00</td></tr>
<tr>
<td valign="top" align="left"><italic>PALB2</italic></td>
<td valign="top" align="left"><italic>PALB2</italic> mutations (total)</td>
<td valign="top" align="left">150</td>
<td valign="top" align="left">2.00</td></tr>
<tr>
<td valign="top" align="left">DDR</td>
<td valign="top" align="left">Aberrations in DNA repair/recombination</td>
<td valign="top" align="left">150</td>
<td valign="top" align="left">22.67</td></tr></tbody></table>
<table-wrap-foot><fn id="tfn7-ijo-55-03-0597">
<p>All studies were in unselected populations from multi-national countries. <italic>ATM</italic>, ataxia telangiectasia mutated; <italic>BRCA</italic>, breast cancer susceptibility gene; <italic>CHEK2</italic>, checkpoint kinase 2; DDR, DNA damage repair; <italic>FANCA</italic>, Fanconi anemia complementation group A; mCRPC, metastatic castration resistant prostate cancer; <italic>MLH1</italic>, MutL homolog 1; <italic>PALB2,</italic> partner and localizer of <italic>BRCA2</italic>; PC, prostate cancer.</p></fn></table-wrap-foot></table-wrap></floats-group></article>
