The Magnetospirillum magneticum AMB-1 strain (American Type Culture Collection, Manassas, VA, USA) was grown microaerobically at 28°C in modified enriched mangnetic spirillum growth medium (EMSGM) (9). For plate cultivation, agar was added (1.5% wt/vol) to the EMSGM. The Escherichia coli DH5α strain (DH5α-competent cells; Takara Bio, Inc., Dalian, Liaoning, China) was used for DNA cloning and the Rosetta (DE3) E. coli strain (Novagen, Heidelberg, Germany) was used for protein expression. The E. coli DH5α strain was grown on Luria-Bertani (LB) medium at 37°C, supplemented with kanamycin (50 μg/ml) or ampicillin (50 μg/ml) and 1.5% (wt/vol) agar, if appropriate (10).

Human breast carcinoma MCF-7 cells, human hepatoma SMMC-7721 cells and HepG2 cells were obtained from China Medical Culture Collection Center (Beijing, China), and grown in RPMI-1640 medium (Gibco-BRL, Carlsbad, CA, USA), supplemented with 10% fetal bovine serum (Beyotime Biotechnology, Beijing, China), penicillin G (100 U/ml) and streptomycin (100 mg/ml) at 37°C in an atmosphere of 5% CO₂. All cell lines were passaged every 3 days and were maintained in exponential growth to ~80% confluence for the subsequent experiments.

The primers and the gene of the anti-type IV collagenase scFv were synthesized, according to the GenBank database (accession no. FJ037775 by Takara Bio, Inc. (11) and cloned into the pMD18-T vector (Thermo Fisher Scientific, San Jose, CA, USA) to create the pMD-scFv vector. DNA fragments were amplified by polymerase chain reaction (PCR) for subsequent cloning using a T-Gradient Thermoblock PCR cycler (Biometra, Gottingen, Germany) and PCR MasterMix (Hangzhou Biosci Biotech Co., Ltd., Hangzhou, China). The scFv gene was amplified from the pMD-scFv plasmid by PCR using the following primers: P1, forward 5′-GGAATTCCATATGCAGGTGAAGCTGCAG-3′, introducing an NdeI restriction site, and P2, reverse 5′-CCGCTCGAGACGTTTGATTTCCAGCTT-3, introducing an XhoI site to the 3′ end of the scFv gene. The cycling conditions were as follows: For mms13, 30 cycles of 94°C for 30 sec, 48°C for 45 sec and 72°C for 1 min; for scFv, 30 cycles of 94°C for 30 sec, 55°C for 45 sec and 72°C for 1 min; and for scFv-mms13, 30 cycles of 94°C for 30 sec, 53°C for 45 sec and 72°C for 1 min. The 763 bp PCR product was purified and digested by NdeI/XhoI (Thermo Fisher Scientific) and then ligated into an NdeI/XhoI-cleaved pET-30a(+) (Novagen) to produce the pET30a(+)-scFv expression vector. Sequences were analyzed by Sangon Biotech Co., Ltd. (Shanghai, China).

The genomic DNA of the M. magneticum AMB-1 was extracted using a MiniBEST Bacterial Genomic DNA Extraction kit (Takara Bio, Inc.). The mms13 gene was amplified from the genome of M. magneticum using the following primers: P3, forward 5′-GGAATTCCATATGCCCTTTCACCTTG-3′, introducing an NdeI restriction site, and P4, reverse 5′-CCGCTCGAGGGCCAGTTCGTCCCG-3′, introducing an XhoI site to the 3′ end of the mms13 gene. The 388 bp PCR product was cloned into pET-30a(+) to produce pET30a(+)-mms13, similar to the previously constructed pET30a(+)-scFv.

The scFv-mms13 fusion gene was constructed using the splicing by overlap-extension PCR (SOE-PCR) technique. The scFv gene was amplified by PCR using the following primers: P5, forward 5′-ATGCAGGTGAAGCTGCAG-3′, and P6, reverse 5′-GGAGCCGCCGCCGCCAGAACCACCACCACCACGTTTGATTTCCAGCTT-3′, and the mms13 gene was amplified using the following primers: P7, forward 5′-GGCGGCGGCG-GCTCCGGTGGTGGTGGTTCTATGCCCTTTCACCTTG-3′ and P8 reverse 5′-GGCCAGTTCGTCCCG-3′. The PCR products of scFv and mms13 were purified using the TIANquick Midi Purification kit (Tiangen Biotech (Beijing) Co., Ltd., Beijing, China) and mixed. The assembly reaction included one cycle of denaturation, annealing and extension, in the absence of primers, to facilitate the assembly of chains, followed by 30 cycles of amplification reactions, in the presence of the scFv forward primer and mms13 reverse primers. The scFv reverse primer and mms13 forward primer included an artificial region of overlap to enable the formation of a flexible segment, corresponding to the G4S3 linker. The product of the SOE-PCR was purified and cloned into the pMD18-T vector to create the pMD-scfv-mms13 expression vector. The scFv-mms13 fusion gene was then amplified from the pMD-scfv-mms13 using the following primers: P1, forward 5′-GGAATTCCATATGCAGGTGAAGCTGCAG-3′, introducing an NdeI restriction site, and P4, reverse 5′-CCGCTCGAGGGCCAGTTCGTCCCG-3′, introducing an XhoI restriction site. The PCR product was cloned into pET-30a(+) to produce pET30a(+)-scFv-mms13.

The procedures for the growth of the DE3 E. coli strain, transformed with pET30a(+)-scFv, pET30a(+)-mms13 or pET30a(+)-scFv-mms13 were performed, according to standard protocol. The strain was cultured in LB medium at 37°C, supplemented with kanamycin (50 μg/ml). Following induction of the target proteins at 37°C for 4 h with 0.2 mM isopropylthio-β-D-thiogalactopyranoside (IPTG; Takara Bio, Inc.), the four fractions, including the medium, periplasmic, soluble cytoplasmic and insoluble samples, were obtained, according to the pET system manual (10th ed; http://www.merckmillipore.com/). The samples were electrophoresed on 15% SDS-polyacrylamide gels, and the proteins were then transblotted onto a nitrocellulose membrane (Millipore, Bedford, MA, USA), blocked with 5% bovine serum albumin (BSA)/Tris-buffered saline with Tween 20 (TBST; 25 mM Tris-HCl at pH 8.0, 125 mM NaCl and 0.05% Tween-20; Beyotime Institute of Biotechnology) for 1 h and incubated with a 1:1,000 dilution of anti-His-Tag monoclonal mouse primary antibody (cat. no. AH367; Beyotime Institute of Biotechnology) overnight at 4°C, followed by incubation with 1:1,000 horseradish peroxidase-labeled goat anti-mouse polyclonal immunoglobulin (Ig)G secondary antibody (cat. no. AO216; Beyotime Institute of Biotechnology) at 37°C for 1 h. The membrane was washed with TBST 5 times for 5 min each time and the antibody reactions were visualized using a Super signal West Pico Trial kit (Thermo Fisher Scientific).

The induced bacterial cells (~10⁸ cells/ml) were centrifuged at 10,000 g for 10 min (HC-2518R; Anhui USTC Zonkia Scientific Instruments Co., Ltd., Hefei, China). The cells pellet was resuspended in binding buffer, containing 20 mmol/l imidazole, 0.5 mol/l NaCl and 20 mmol/l NaH₂PO₄ (pH 7.5), and sonicated (JY92-2D; Ningbo Scientz Bio, Inc., Ningbo, China), followed by centrifugation of the cell lysate at 12,000 g for 10 min at 4°C. The pellet was then resuspended and incubated in binding buffer, containing 8 mol/l urea, on ice for 1 h. The insoluble material was then removed by centrifugation at 12,000 g for 20 min. The supernatant was filtered through a 0.45 nm membrane and purified using HisTrap affinity columns (GE Healthcare, Amersham, UK), under denaturing conditions, according to the manufacturer’s instructions. The column was washed with distilled water with a flow rate of 1 ml/min and was equilibrated with binding buffer (20 mM NaH₂PO₄, 0.5 M NaCl, 20 mM imidazole, 8 M urea, pH 7.4). The column was then washed with binding buffer and eluted with elution buffer (20 mM NaH₂PO₄, 0.5 M NaCl, 500 mM imidazole, 8 M urea, pH 7.4). The purified ScFv and ScFv-mms13 proteins were refolded using step-wise dialysis, as reported previously (12). In brief, β-mercaptoethanol (Tianjin Guangfu Fine Chemical Research Institute, Tianjin, China) was added to the protein solution at 1 M. The protein solution was dialysed with 50 fold refolding buffer (50 mM Tris-HCl, 1 mM EDAT, 200 mM NCl, pH 8.0) with 8 M urea (Tianjin Kemiou Chemical Reagent Co., Ltd., Tianjin, China) at 4°C for 12 h. The refolding buffer was replaced with step-wise concentrations of urea (4, 2, 1, 0.5 and 0 M). Oxidized glutathione (Beijing Solarbio Science & Technology Co., Ltd., Beijing, China) was added at 50 μM and L-arginine (Sangon Biotech Co., Ltd.) at 400 mM was added with the 1 M urea step.

The protein concentrations of the fractions was determined using a Bicinchoninic Acid Protein Assay kit (Beyotime Institute of Biotechnology) using various concentrations of BSA (2, 1.5, 1, 0.75, 0.5, 0.25, 0.125, 0.025 and 0 mg/m1; 25 μl/well; Beyotime Institute of Biotechnology) as a standard. The proteins were analyzed throughout using SDS-PAGE and the gels were stained with Coomassie brilliant blue (2.5 g with 500 ml methanol and 100 ml glacial acetic acid made up with 1 L ddH₂O; Sinopharm Chemical Reagent Co., Ltd., Shanghai, China).

The cells (2×10⁴ cells/well) were grown in 96-well plates to confluence, washed with phosphate-buffered saline (PBS; Beyotime Institute of Biotechnology) and fixed for 30 min with 50 μl/well methanol at 4°C. For gelatinase, 96-well microtiter plates were coated with 100 μl/well of 10 μg/ml type IV collagenase (Thermo Fisher Scientific) at 4°C overnight. The plates containing type IV collagenase or the fixed cells were washed three times with PBS and blocked with 1% BSA/PBS at 4°C overnight. The wells were emptied and 50 μl ScFv, Mms13 or ScFv-mms13 were added in two-fold serial dilutions at concentrations ranging between 0.1 and 50 μmol/l for 2 h at 37°C. Following washing with PBS, the wells were incubated with 50 μl/well 1:1,500 anti-His tag mAb (Beyotime Institute of Biotechnology), as a primary antibody, at 37°C 1 h. The wells were then overlaid with 50 μl/well 1:2,000 horseradish peroxidase-labeled goat anti-mouse IgG (Beyotime Institute of Biotechnology), as a secondary antibody, at 37°C 1 h following washing with PBS. Color development was achieved using 100 μl o-Phenylenediamine solution, which was terminated after 10 min with 100 μl 2 mol/l H₂SO₄. The absorbance was measured at 490 nm using a Multiskan MK3 microplate reader (Thermo Fisher Scientific). All assays were performed in triplicate.

Immunofluorescent staining was performed on the antigen-positive SMMC-7721 and MCF-7 cells. The cells were grown on slides and fixed in ice-cold methanol for 30 min. Nonspecific binding was inhibited using 200 μl/well 1% BSA/PBS at 4°C overnight. Following washing with PBS, the cells were incubated with 50 μl/well ScFv, Mms13 or ScFv-mms13. The cells were then overlaid with 1:1,500 mouse anti-His tag monoclonal antibodies (Beyotime Institute of Biotechnology) following washing with PBS. A final washing step with PBS was performed, and the slides were mounted with 1:2,000 fluorescein isothiocyanate-conjugated goat anti-mouse antibody (Beyotime Institute of Biotechnology) and fluorescence images were captured using an Olympus BX60 microscope (magnification, ×100), equipped with an Olympus DP71 camera and Olympus DP-Controller software, version 2.1 (Olympus Corporation, Tokyo, Japan).

The DNA sequences encoding the mms13 gene and the scFv of the 3G11 mAb were cloned into the NdeI/XhoI restriction sites of pET-30a(+), producing the pET30a(+)-mms13 (Fig. 1A) and pET30a(+)-scFv (Fig. 1B) expression vectors. The mms13 and scFv genes were amplified by PCR, and were linked using SOE-PCR to yield the scFv-mms13 fusion gene. A 15 amino acid spacer (G₄S)₃ was present between the C-terminus of the scFv and the N-terminus of the mms13 genes. The scFv-mms13 fusion gene was cloned into the NdeI/XhoI restriction sites of pET-30a(+) to create the pET30a(+)-scfv-mms13 expression vector (Fig. 1C). Sequence analyses confirmed all the expected DNA sequences. All the three genes were under the control of the T7 promoter, and a (His)₆-tag was introduced at the C-terminus of the constructs to facilitate purification using immobilized metal affinity chromatography. The Mms13, ScFv and ScFv-mms13 fusion protein were composed of 132, 253 and 394 amino acids (Fig. 1D), with theoretical molecular weights of 13.4, 27.4 and 40.9 kDa respectively.

The three expression vectors were transformed into the DE3 E. coli strain, and the target proteins were induced by the addition of IPTG. The results of the Coomassie Blue-stained gel indicated that Mms13 was present in the cytoplasmic soluble fraction, ScFv was present in the insoluble fractions (data not shown) and the ScFv-mms13 fusion protein was present in the cytoplasmic soluble fraction and insoluble fractions (Fig. 2A). The three proteins were further confirmed using western blot analysis with an anti-His-Tag antibody (Fig. 2B). The three proteins were purified using immobilized metal-affinity chromatography resin under denaturing conditions, and the purified ScFv and ScFv-mms13 proteins were refolded using step-wise dialysis, as reported previously (12).

To confirm the correct folding and functional binding of the fusion protein, the abilities of ScFv, Mms13 and ScFv-mms13 to bind to the target antigen type IV collagenase or antigen-relevant tumor cells were examined using ELISA. The data indicated that ScFv and ScFv-mms13 bound to the type IV collagenase or the antigen-associated cancer cells, including SMMC-7721, MCF-7 and HepG2 cells, in a dose-dependent and saturable manner (Fig. 3A). Although the immunoreactivities of ScFv-mms13 to the type IV collagenase and associated tumor cells were marginally lower than the corresponding scFv (3G11), there remained considerable binding ability to the antigen by ScFv-mms13 (Fig. 3A).

Immunofluorescence staining was performed on the ScFv-, mms13- and ScFv-mms13-treated SMMC-7721 and MCF-7 cells. As shown in Fig. 3B, the ScFv and ScFv-mms13 fusion protein exhibited green fluorescence, whereas no fluorescence was observed in the PBS control or Mms13, which further confirmed the immunoreactivity of ScFv-mms13.