Introduction
Aspergillus fumigatus is one of the most common opportunistic pathogenic fungi, and is able to survive in various environmental conditions. Although several Aspergillus species can cause clinical infections, A. fumigatus accounts for >70% of cases (1–3). Although immunosuppressive regimens, which target hematological malignancies and tumors, have been commonly utilized, and have also been used in organ transplantation, the morbidity rates of invasive aspergillosis (IA) have been increasing exponentially in previous years. Thus, an increasing number of investigations have focussed on this fungus, as understanding the pathogenic mechanism of A. fumigatus is important (4). In 2005, the whole genome of A. fumigatus was sequenced, which provided a precondition for further comprehensive investigations of this fungal pathogen (4).
An association between the virulence of A. fumigatus and the immune condition of the host can be deduced from the characteristics of the susceptible population. When A. fumigatus invasion occurs in humans, the innate immune system performs a crucial role in scavenging the fungus (5). Alveolar macrophages eliminate the conidia of A. fumigatus by NADPH oxidase, whereas prevention against hyphae and immune-evading conidia is mediated by neutrophils, which use respiratory bursting to generate reactive oxygen species (ROS) and form neutrophilic extracellular traps (6,7). The importance of anti-oxidative stress in the contribution to A. fumigatus virulence is clearly demonstrated in patients suffering from chronic granulomatous deficiency, who carry allosome-recessive inheritance mutations in components of the oxidase failing in superoxide anion synthesis, who frequently present with IA (6,7). In previous studies on anti-oxidative stress of fungi, the majority of the investigations have concentrated on Saccharomyces cerevisiae and Candida albicans. However, the genetic association among A. fumigatus and the two species are distant, and only certain transcription factors and ROS-scavenging proteins have been validated as being associated with anti-oxidative stress in A. fumigatus (8–12). Therefore, comprehensive investigations are necessary to identify novel associated genes and elucidate their functions to overcome the limitations of conventional treatment methods (13,14).
Functional genomics is a genetic strategy, which depends on a stable transformation system and specific screening methods to determine certain function-associated genes (15). Agrobacterium tumefaciens-mediated transformation (ATMT) has been widely used for botanical and fungal genetic manipulation. A. tumefaciens can transfer part of a plasmid (transferred DNA; T-DNA) into the genome of a host to produce mutants. ATMT has shown several advantages, including higher transformation frequency, more stable transformants with a single T-DNA copy and various available acceptors (16). T-DNA is composed of a right border (RB), left border (LB) and the sequences between them. An efficient polymerase chain reaction (PCR) method can be used to analyze the disrupted genes by amplification of the flanking sequences of RB and LB (15,16). Genome-wide mutant libraries of Magnaporthe oryzae and Arabidopsis, based on ATMT, have been established (17,18). With the availability of the complete genome of A. fumigatus, the functional genomics, based on ATMT, can be examined to contribute to a better understanding of the gene functions, and to identify novel genes or pathways involved in anti-oxidative stress. This may aid in providing novel targets for the treatment of IA.
In the present study, a number of randomly-inserted mutants of A. fumigatus, mediated by A. tumefaciens were identified. H2O2 was used as a screening reagent. Several mutants exhibited changes in H2O2 sensitivity, among which a relatively marked increase in sensitivity was observed in the AFM2658 mutant. The insertional site of AFM2658 was then characterized, and the mutant was compared with the wild-type in terms of the diameter of colonies, and levels of ROS and mRNA, to determine whether the sequence alteration increases H2O2 sensitivity.
Materials and methods
Fungal strains and plasmid
A. fumigatus (IFM40808; wild-type) was provided by the Medical Mycology Research Center of Chiba University (Chiba, China). The strain was cultured at 28°C on potato dextrose agar (PDA; BD Biosciences, San Diego, CA, USA). The A. tumefaciens strain, AGL-1, was provided by Professor Zhonghua Wang of Fujian Agriculture and Forestry University (Fujian, China), as was the pBHt1 vector, harboring the hygromycin B phosphotransferase (hph) gene as the selection tag under the regulation of the Aspergillus nidulans trpC promoter (19).
ATMT transformation
The transformation process was modified based on a preliminary study (18). AGL-1, carrying pBHt1, was cultured at 28°C in 10 ml Luria-Bertani (LB) medium, with 20 µg/ml rifampicin and 100 µg/ml kanamycin for 24 h in a rotatory shaker (200 rpm). Subsequently ~3.0 ml of the culture was centrifuged at 2,400 g for 10 min, and the precipitate was resuspended in inducible medium supplemented with 200 µM acetosyringone to achieve an optical density (OD) of between 0.2 and 0.4 at 600 nm by a microplate reader (Molecular Devices, Sunnyvale, CA, USA). The medium was cultured with agitation at 140 rpm at 28°C for 8-10 h until an OD600 nm value of 0.8, 0.9 or 1.0 was reached. A. fumigatus (IFM40808) was cultured on PDA at 28°C for 5 days. The conidia were then scraped from the clones into moderate 0.9% sodium chloride solution with 0.1% Tween 80 Sigma-Aldrich (St. Louis, MO, USA) to attain final concentrations of 106, 107 and 108 conidia/ml.
Sterile microporous filters (0.45 µm, GE Healthcare Life Sciences Logan, UT, USA) were placed on solid IM+AS plates. A total of 100 µl of each AGL-1 culture was mixed with an equal volume of the corresponding concentration of the IFM40808 conidia, and pipetted onto the filters. The plates were cultured at 20, 23 or 25°C for 36, 48 or 60 h. The filters were then transferred onto selection media (SM; which consisted of PDA with 200 µM cefotaxime and 100 µg/ml hygromycin B; both from Sigma-Aldrich) at 37°C in the dark, until colonies of the mutants appeared. Sterile sticks were used to transfer the monocolonies into freezing tubes containing SM, and were cultured at 37°C in the dark for ~48 h. The colonies were stored at 4°C only when spore germination occurred.
Molecular analysis of mutants
Analysis of the insertion sequence was performed, according to a previously described method (16,20). Briefly, the mutants were cultured in PDB at 28°C for 24 h, following which the mycelia were collected and centrifuged at 5,600 × g for 1 min at 4°C. DNA was extracted using a DNA extraction kit (Takara Biotechnology, Co., Ltd., Dalian, China) according to the manufacturer's instructions. The insertion of the hph gene was identified using PCR amplification with forward and reverse hph primers (Table II). The PCR reaction contained 2.5 µl of 10X loading buffer, 5 nmol dNTP, 1.25 units Taq, 10 pmol hph-f and hph-r, and 100 ng DNA. The total volume was 25 µl. The PCR recycling was performed as follows: Template denaturation at 95°C for 2 min, 35 cycles of 94°C for 30 sec, 52°C for 30 sec, 72°C for 1 min, followed by 72°C for 10 min. TAIL-PCR was performed, as described previously (16), and was used to identify the T-DNA flanking sequences of the mutants (Table II). All PCR amplifications were performed on a Takara PCR Thermal Cycler Dice (Takara Bio, Inc., Shiga, Japan). The reaction products were sequenced by Shenggong Co., Ltd. (Beijing, China).
Identification of H<sub>2</sub>O<sub>2</sub> concentrations and primary screening
A 5 µl suspension of the IFM40808 conidia, with a concentration of 2×107 conidia/ml, was spotted on PDA plates containing different concentrations of H2O2 (0, 0.5, 1.0, 1.5, 2.0, 2.5, 3.0 and 3.5 mM), and incubated in the dark at 28°C for 3 days to determine the final screening concentrations. Subsequently, between 30 and 40 CFU reactivated mutants of IFM40808 were added to PDA plates with H2O2 and cultured at 28°C for 3 days. The strains exhibiting clear growth restriction were selected for further experiments.
Fluid quantitative screening
The conidia of the H2O2-sensitive mutants and wild types were collected, and conidia suspensions were established (107 conidia/ml), comprising 10 µl conidia suspended in 5 ml PDB containing serial concentrations of H2O2 (2, 2.5, 3.0, 3.5 and 4.0 mM). The suspension was then incubated at 28°C for 72 h. The turbidity of the PDB was evaluated by the naked eye and used to determine whether the strains grew.
Growth curves of colony diameter
Triplicate 5 µl suspensions of conidia (2×107 conidia/ml) of the sensitive mutants were exposed to PDA with either H2O2 (0, 2, 2.5 and 3 mM) or menadione (20, 40 and 60 µM), and were cultured at 28°C for 3 days. Sequential measurements of the diameters of the colonies were performed in each condition.
Spot assay
Conidia were diluted serially to determine the defined concentrations. Conidia at concentrations of ~105, 104, 103 and 102, in a volume of 5 µl, were spotted on PDA with or without 2.5 mM H2O2, and then incubated at 37°C for 48 h (21).
Protoplast preparation
The procedure was based on a previously described method with modification (22). Briefly, 108 fresh conidia were added to normal saline containing 0.4% Tween 80, and then injected into 10 ml of Czapek (Sigma-Aldrich) or PDB culture. The cultures were centrifuged for 15 min at 2,400 × g once the germination rate reached 80%. The precipitate was then cleaned using 0.6 M KCl solution. The resulting product was processed by 4 ml 1.2 M sorbitol-10 mM potassium phosphate (pH 5.8), containing either 1 mg/ml helicase (Sangon Biotech, Shanghai, China), 1 mg/ml cellulose (Sangon Biotech) and 5 mg/ml lywallzyme (GIMCC, Guangzhou, China), or 5 mg/ml helicase, 5 mg/ml cellulose and 10 mg/ml lywallzyme. The mixtures were then incubated in a shaker (140 rpm) at 28 or 30°C. The duration was determined by the microscopic examination (Nikon YS2-H, Tokyo, Japan). When a high yield of protoplasts was obtained, centrifugation was performed at 2,000 × g for 20 min. The residual enzyme was eliminated using 0.6 M KCl solution, and the precipitate was resuspended with the regenerated buffer, containing 1 M sorbitol and 10 mM Tris-HCl (pH 7.5). The protoplasts were immediately used in the subsequent experiments.
2,7-dichlorofluorescin diacetate (DCFH-DA) staining
DCFH-DA (Sigma-Aldrich, St. Louis, MO, USA; 10 µM) was added to the protoplast sample at a volume of 0.1%. The mixture was incubated at 37°C for 30 min, and then centrifuged at 4,000 rpm for 20 min. The supernatant was discarded, and 0.6 M KCl solution was used to resuspend the precipitate, which was then centrifuged and resuspended in moderate regeneration buffer. Different volumes of H2O2 were added to the protoplast solution, to produce final concentrations of 0, 0.6 and 2.4, which were then incubated at 37°C for 0, 30 and 60 min, respectively. The conidia were visualized using an Olympus FV1000 confocal laser microscope (Olympus Corporation, Tokyo, Japan) to determine the ROS levels.
Determination of the mRNA levels of oxidative stress-assiociated genes
The conidia suspension (~108) was added to and incubated with 10 ml PDB at 28°C for 48 h in a rotatory shaker (140 rpm). The moderate H2O2 was then added to obtain a final concentration to 3 mM. Following stimulation of the mycelia for 3 and 6 h, the mycelia were leached and TRIzol was used to extract the total RNA (Invitrogen; Thermo Fisher Scientific, Inc., Waltham, MA, USA). First strand cDNA were generated, according to the manufacturer's protocol (Promega Corporation, Madison, MI, USA). The levels of the glutathione peroxidase Hyr1 gene, AfYap1 gene, integral membrane protein (IMP) gene and helix-loop-helix transcription factor (HLH) gene were normalized by glyc-eraldehyde-3 phosphate dehydrogenase. The corresponding primers used are listed in Table I. cDNA primers were designed, according to those in GeneBank (http://www.ncbi.nlm.nih.gov/genbank). The PCR products underwent electrophoresis on 0.8% agarose gel with ethidium bromide, and were analyzed using a gel imaging system (1600-GIS 1D; Tanon, Shanghai, China).
Anti-fungal drug susceptibility assessment
Itraconazole, voriconazole, fluconazole and amphotericin B (Sigma-Aldrich) were selected to determine the susceptibility of A. fumigatus IFM40808 and the AFM2658 mutant (23). All agents were serially diluted 2-fold to achieve the final concentration range of 0.0156–16 µg/ml. Conidia (5,000) were challenged by the agents for 24 h at 37°C. The OD at 600 nm was measured. All experiments described above were performed three times.
Statistical analysis
The mean ± standard deviation of the colony diameters was performed by GraphPad Prism 5 software (GraphPad Software, Inc., La Jolla, CA, USA). The quantitation of the results of electrophoresis was analyzed by Quantity One (Bio-Rad, Hercules, CA, USA). Data were analyzed with SPSS 16.0 (SPSS Inc., Chicago, IL, USA). P<0.05 was viewed as statistically significant.
Results
Optimization of the ATMT system for A. fumigates
Mutant cultures of ~100–120/plate were achieved using the ATMT system when 108 conidia/ml was co-cultivated with A. tumefaciens (OD600 nm of 0.8) at 20°C for 48 h. The sum of the mutants was ~4,000. The fungal background was clear, with a true positive rate of ~95%. The true positive rate indicated the percentage of true mutants from all the colonies, which survived culture with hygromycin B twice, followed by verification of T-DNA insertion using PCR, (Fig. 1; Table III).
AFM2658 exhibits higher levels of sensitivity towards H<sub>2</sub>O<sub>2</sub>, compared with IFM40808
When IFM40808 was grown for 3 days without H2O2, the average colony diameter was 35 mm, whereas following culture with 2.5 mM H2O2, the diameter was 31 mm. Thus, this concentration of H2O2 was selected as the primary selection concentration. Selection among the 1,000 mutants was performed by comparing the colony diameter with that of IFM40808. The colonies exhibiting significant inhibition were selected for further selection experiments. Without H2O2, the average diameter of the AFM2658 colonies reached 36 mm after 3 days. However, when the cultures were treated with 2 and 3 mM H2O2, the average diameters of IFM40808 reached 35 and 29 mm, whereas in AFM2658, the diameters were 32 and 19 mm (Figs. 2 and 3). Following culture in PDB with 2 and 2.5 mM H2O2, AFM2658 and IFM40808 were turbid with dark green pellicles. IFM40808 with 3 and 3.5 mM H2O2 retained the ability to germinate, compared with the non-viable conidia of AFM2658. Neither survived following culture with 4 mM H2O2 (Fig. 4).
With 20 µM menadione, the average diameters of the two strains was 22 mm. On the PDA plates containing 40 µM, the diameter of AFM2658 was 18 mm, whereas that of IFM40808 was 17 mm. With 60 µM menadione, the strains were inhibited to the size of 12 mm (data not shown).
In the spot assay, in which 105, 104, 103 and 102 conidia cultured on PDA plates without reagents for 2 days, the average diameter for the two strains were 27, 24, 21 and 18 mm, respectively. Culture of 105, 104, 103 and 102 conidia with 2.5 mM H2O2, resulted in average diameters of 21, 15, 8, 0 mm, respectively for AFM2658, and 23, 19, 13 and 0 mm respectively for IFM40808 (Fig. 5).
Identification of the inter-region of AFM2658 between the two coding regions
The RB and LB flanking sequences were obtained using TAIL-PCR. Following Blast of the A. fumigatus Af293 whole genome, the insertion site was located on chromosome 2 afu1_92, and the 96 bp sequence was knocked out using T-DNA (5′-CTG AAC AGA AAA CAC TCG GTT GTT CTT TGG CGC GGT ATC TAC CTT ATC CAC TCT TGC TCC TTT GAG AAC TCT GGG ATC GTC CAA ATC GCA CCC TAC-3′). This site was located between the IMP coding region and the HLH coding region. The inter-region sequence was ~1,500 bp. The RB was on the 5′ site for ~300 bp of the HLH transcription factor coding region, and LB was on the 5′ site for ~400 bp (Fig. 6).
ROS production in AFM2658 is increased when exposed to H<sub>2</sub>O<sub>2</sub>
The enzymolysis of conidia was most marked following incubation with 5 mg/ml hlicase-5 mg/ml cellulase-10 mg/ml lywallzyme at 28°C for 2.5 h. When 2.4 mM H2O2 was incubated with AFM2658 for 60 min, asymmetrical high green fluorescence was observed, attached to the cell membrane. By contrast, 30 min with 0.6 mM H2O2, a lower level of fluorescence was observed. All IFM40808 groups had lower green fluorescence, compared with AFM2658 that was treated with 2.4 mM H2O2 for 60 min (Fig. 7).
Anti-oxidative stress-associated genes are transcribed differently
The results of the PCR showed that the mRNA level of HLH in IFM40808 decreased following treatment with 3 mM H2O2 for 3 h, but increased following treatment with 3 mM H2O2 for 6 h. Compared with IFM40808, the basal level of HLH in AFM2658 remained low. Following treatment with H2O2 for 3 h, a marginal increase occurred, however, this was reversed when treated with H2O2 for 6 h. Notably, the mRNA level of IMP in IFM40808 was markedly upregulated following exposure to H2O2 for 6 h, but not 3 h. By contrast, the mRNA level of IMP in AFM2658 decreased when treated with H2O2.
Previous studies have shown hat GPX3 functions as an anti-oxidative enzyme, as well as an activator of transcription factor YAP1 in S. cerevisiae (24,25). Hyr1 and AfYap1 of A. fumigatus are orthologs to GPX3 and YAP1, respectively. In the present study, the mRNA level of Hyr1 increased initially, and decreased with increasing duration of treatment with H2O2 in the IFM40808 and AFM2658 strains. Following a short duration of H2O2 treatment, A. fumigatus upregulated the transcription of Hyr1 and maintained a moderate expression levels of AfYap1, to provide adaptive responses to H2O2. Following treatment for 6 h, the mRNA levels of Hyr1 and AfYap1 decreased markedly, and this appeared to be more marked in AFM2658. The expression levels of Hyr1 and AfYap1 were higher in IFM40808, compared with AFM2658 in every experimental condition (Fig. 8).
AFM2658 exhibits no changes in susceptibility to certain antifungal drugs
The AFM2658 and IFM40808 strains were not affected following exposure to minimum inhibitory concentrations of itraconazole or voriconazol (31.25 pg/ml and 1 µg/ ml, respectively). Fluconazole (64 µg/ml) and amphotericin B (16 µg/ml) also had no suppressive effects on either strain.
Discussion
The conidia of A. fumigatus are inhaled into the respiratory system and are immediately challenged by various environmental changes, particularly those derived from the innate immune system. The majority of the mechanisms of immune defense remain to be fully elucidated, however, a number of the reports have focused on intracellular or extracellular oxidative stress. ROS accounts for the majority of oxidative stress, and the inhalation of A. fumigatus can generate a certain level of ROS (26).
Several detoxifying strategies have been characterized in A. fumigatus and other fungi, including the thioredoxin and glutathione system, catalase and superoxide dismutase to detoxify the superoxide anion, H2O2, and hydroxylradical and its derivatives (5). The regulatory mechanism underlying the induction of in these anti-oxidative stress proteins remains to be fully elucidated. In previous studies of fungi, the ROS scavenger system of Saccharomyces cerevisiae has been analyzed more comprehensively (24,27), and the mechanisms, which regulate the fungal response to oxidative stress have been established into two types: Activity regulation by protein phosphorylation and nuclear localization control (27). GPX3 is universally acknowledged as a peroxide sensor and important regulator of transcription factor YAP1, and it appears to account for the majority of activity to alleviate membrane phospholipid hydroperoxides (24). Yap1, acting as a responsive factor, can accumulate in the nucleus to activate the transcription of anti-oxidative-associated genes, including TRX2 and GSH1, due to a shift in its structure when the pathogen encounters ROS (24). Based on the homologous sequences of A. fumigatus with S. cerevisiae, it has been reported that AfYap1p and Skn7 knock-out strains of A. fumigatus exhibit higher levels of sensitivity to H2O2 (11,12).
Comparison with the model pathway of other fungi is not always an accurate strategy to determine the function of genes. In addition, the specific oxidant responsive pathways and the sensitivities to oxidative stress have an effect. For example, Msn2/4 has a significant role in S. cerevisiae and C. glabrata, however it has no effect on the response to oxidant stress in C. albicans, and in A. fumigatus, no homlogous sequence of Msn2/4 has been identified. Evidence indicates an evolutionary divergence in function among these fungi (28–31). In addition, it is difficult to obtain comprehensive understanding of anti-oxidative stress by focusing on a single gene. Previous investigations have knocked-out almost all the non-essential genes of S. cerevisiae, and >600 genes have been determined as anti-oxidative-associated genes (32). To obtain a further understanding of anti-oxidative-associated genes, the present study constructed a transformed system, mediated by A. tumefaciens.
Following construction of the transformation system, 100-120 mutants were identified in 107 conidia, which were almost the same frequencies of transformation as obtained in a previous study (25). Temperature appeared to have an effect in the ATMT of A. fumigatus, and 25°C was selected for co-cultivation due to the consensus of opinions that the optimal temperature for ATMT of the majority of filamentous fungi is between 22 and 25°C (25,33). However, at this temperature, regardless of co-cultivation conditions, few mutant monocolonies emerged, and a low true positive rate was recorded. It was observed that A. fumigatus germinated with white mycelia or generated dark-green conidia, prior to transfer to the selected media, and appeared to be more tolerant to hygromycin. To limit the redundant growing rate and realize the selection function of hygromycin, the temperature was decreased to 23 or 20°C. As the growth of mutants at 23°C was almost equal to that at 20°C, a temperature of 20°C was selected to ensure optimal conditions to obtain a higher true positive rate and clearer fungal background. This temperature was considered to suitable for the virulent proteins utilized by A. tumefaciens to transfer T-DNA. Of note, whereas attention has previously focussed on the term 'transformation frequencies', one of the main aims of randomly-inserted mutation is to acquire adequate mutants. Thus, a marginally reduced transformation frequency can be supplemented by increasing the amount of conidia, to obtain sufficient transformers on each plate. The present study aimed to identify novel anti-oxidative stress-associated genes using this randomly inserted transformation system.
Although no oxidant can represent natural oxidative stress (34), H2O2 is most widely used as a model for oxidative stress conditions (24). Thus, H2O2 was selected as the screening agent in the present study. A total of 100 mutants were screened as H2O2-sensitive candidates. These mutants were quantitatively screened, and 10 mutants were confirmed. Among these mutants, the inserted sites of eight mutants were coding regions (data not shown). The concentration of H2O2 tolerated by IFM40808 was 1 mM higher, compared with AFM2658. No differences were observed between the two strains without H2O2 treatment, which demonstrated that the disrupted gene was associated with the oxidative stress caused by H2O2, and not with growth. However, no significant differences were observed following treatment with menadione. Nikolaou et al also found that certain fungi were more resistant to menadione than H2O2 (28). This may be due to the fact that menadione predominantly induces superoxide anions, whereas peroxide is the major product of H2O2. Active electron transportation among these ROS substances makes it difficult to obtain a conclusion when the responses are attributable to the types of ROS.
A previous report demonstrated that azoles require intact mitochondrial function to exert their toxicity, and decreased intracellular generation of ROS may lead to reduced susceptibility of azoles (35). In the present study, antifungal drug susceptibility assessment was performed, and AFM2658 exhibited the same susceptibility as AFM40808, which may be explained by the specificity of the disrupted sequence, not associated with respiratory chains, and other pharmacological actions of azoles, including interrupting ergosterol synthetase function (36).
To identify whether the mechanism of fungal death by H2O2 was ROS-mediated, DCFH-DA staining was used in the present study. DCFH-DA fluorescence is not observed until it encounters intracellular esterase, and ROS can transform DCFH into DCF with notable fluorescence. A. fumigatus exhibits marked autofluorescence (AF), which affects the observation of ROS (37). AF is closely associated with compounds of the cell wall, in which chitin may have a significant role. Adding metal ions or altering the pH also affects the generation of AF (38,39). Therefore, protoplast preparation and culture adjustment was performed to acquire the least AF. The results revealed that the complete protoplasts, containing almost no cell wall, cultured in Czapek culture, exhibited lower levels of AF than the opposite. The present study observed that the increase in DCF-associated fluorescence was concentration- and time-dependent. The intensity of ROS fluorescence in AFM2658 was more marked, compared with that in IFM40808 when cultured in PDB with 2.4 mM H2O2 for 60 min. Other groups had less marked differences. The regulation of anti-oxidative stress remained at lower concentrations and/or shorter processing duration. As the duration extended, the concentration increased, and anti-oxidant was exhausted or its generation was suppressed, leading to delayed ROS scavenging. The ROS may act as a pathway signal, which can induce cell apoptosis or destroy a wide range of molecules directly.
To further examine the changes in gene transcription following exposure to H2O2, the expression levels of anti-oxidative stress-associated genes in the fungi were detected using TAIL-PCR. Downregulation in the expression levels of Hyr1 and Af Yap1 in AFM2658 were observed, which may have sensitized AFM2658 to H2O2. AfYap1 has been identified as the ortholog to YAP1 in S. cerevisiae (12). The RNA of Hyr1 of A. fumigatus was assumed to encode a similar protein (GPX3) in S. cerevisiae (24). Based on the functions mentioned above, the present study hypothesized that the decreased expression of GPX3 may correspond with the decreased resistance to membrane phospholipid hydroperoxides, and also contribute to the weakened ability to mediate ROS signals to YAP1, resulting in the failure of nuclear localization of YAP1. Together with the change in the expression of YAP1, the expression levels of the downstream YAP1-targeted are likely to be affected. The expression levels of the two genes changed with the duration of stress. Therefore, the present study hypothesized that the fungi can regulate the transcription of the genes to adapt to the oxidative stress for a short time. However, as time progresses, the anti-oxidative stress-associated genes cannot act against the continuous stress efficiently. Furthermore, the oxidative stress injures the cell, and the expression of genes may be interrupted, leading to the irreversible outcomes.
In conclusion, the present study demonstrated that the insertion site of AFM2658 was associated with anti-oxidative stress. TAIL-PCR was used to amplify the flanking sequences of RB and LB, and the sequences were blasted with the Af293 genome. The results revealed that the site was located between the IMP coding region and the HLH coding region, with the RB at the 5′ site for ~300 bp of the HLH coding region and LB at the 5′ site for ~100 bp of the IMP-coding region, which may be either the 5′-untranslated region (UTR) or the intergenic region of the two genes. The 5′-UTR usually includes m7G, hairpin, uORF (upstream open frame) and internal ribosome entry site (IRES). Although the length of the 5′-UTR sequence of 100–200 bp is common, its length can vary between dozens and thousands, and is usually longer than the average length in genes regulating important processes, including cell growth (40). The HLH transcription factors confer regulation in several pathways in mammalian cells. The sequence replaced was aligned to a known 5′-UTR, based on the BLAST database (http://www.ba.itb.cnr.it/BIG/Blast/utrblast.cgi). Notably, 16 bp af the sequence were identical to the 5′-UTR of the mRNA of Arabidopsis thaliana and Oryza sativa of the Japonica group (41). Thus, the identified site was more likely to be a 5′UTR, however, this was based on the site of transcription initiation, which can be confirmed using a 5′RACE experiment. Analyzing the sequence between the two coding regions provided no information about common promoters, including TATA box and CAAT box, however, the mRNA levels of HLH and IMP were altered, indicating that H2O2 sensitivity may shift following the changes in these two genes. Which structures are disrupted to result in the altered expression levels of these two genes remains to be elucidated and requires further investigation.
In conclusion, the present study used H2O2 as a model of oxidative stress to screen ATMT mutants exhibiting altered sensitivities to H2O2, and compared the AFM2658 strain with the wild-type strain in terms of colonial morphology, ROS levels and mRNA levels. It was revealed that the insertion site may be associated with H2O2 sensitivity, and the results provide a foundation for further investigations of the signaling pathways in fungi.