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<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">Molecular Medicine Reports</journal-id>
<journal-title-group>
<journal-title>Molecular Medicine Reports</journal-title>
</journal-title-group>
<issn pub-type="ppub">1791-2997</issn>
<issn pub-type="epub">1791-3004</issn>
<publisher>
<publisher-name>D.A. Spandidos</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3892/mmr.2018.9661</article-id>
<article-id pub-id-type="publisher-id">mmr-19-01-0195</article-id>
<article-categories>
<subj-group>
<subject>Articles</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>Functional analysis of the correlation between <italic>ABCB11</italic> gene mutation and primary intrahepatic stone</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author"><name><surname>Gan</surname><given-names>Lang</given-names></name>
<xref rid="af1-mmr-19-01-0195" ref-type="aff"/>
<xref rid="fn1-mmr-19-01-0195" ref-type="author-notes">&#x002A;</xref></contrib>
<contrib contrib-type="author"><name><surname>Pan</surname><given-names>Shuguang</given-names></name>
<xref rid="af1-mmr-19-01-0195" ref-type="aff"/>
<xref rid="fn1-mmr-19-01-0195" ref-type="author-notes">&#x002A;</xref></contrib>
<contrib contrib-type="author"><name><surname>Cui</surname><given-names>Jinchi</given-names></name>
<xref rid="af1-mmr-19-01-0195" ref-type="aff"/></contrib>
<contrib contrib-type="author"><name><surname>Bai</surname><given-names>Jie</given-names></name>
<xref rid="af1-mmr-19-01-0195" ref-type="aff"/></contrib>
<contrib contrib-type="author"><name><surname>Jiang</surname><given-names>Peng</given-names></name>
<xref rid="af1-mmr-19-01-0195" ref-type="aff"/></contrib>
<contrib contrib-type="author"><name><surname>He</surname><given-names>Yu</given-names></name>
<xref rid="af1-mmr-19-01-0195" ref-type="aff"/>
<xref rid="c1-mmr-19-01-0195" ref-type="corresp"/></contrib>
</contrib-group>
<aff id="af1-mmr-19-01-0195">Institute of Hepatobiliary Surgery, Southwest Hospital, Third Military Medical University (Army Medical University), Chongqing 400038, P.R. China</aff>
<author-notes>
<corresp id="c1-mmr-19-01-0195"><italic>Correspondence to</italic>: Dr Yu He, Institute of Hepatobiliary Surgery, Southwest Hospital, Third Military Medical University (Army Medical University), 30 Gaotanyan Street, Shapingba, Chongqing 400038, P.R. China, E-mail: <email>heyu717@163.com</email></corresp>
<fn id="fn1-mmr-19-01-0195"><label>&#x002A;</label><p>Contributed equally</p></fn>
</author-notes>
<pub-date pub-type="ppub"><month>01</month><year>2019</year></pub-date>
<pub-date pub-type="epub"><day>15</day><month>11</month><year>2018</year></pub-date>
<volume>19</volume>
<issue>1</issue>
<fpage>195</fpage>
<lpage>204</lpage>
<history>
<date date-type="received"><day>27</day><month>01</month><year>2018</year></date>
<date date-type="accepted"><day>22</day><month>10</month><year>2018</year></date>
</history>
<permissions>
<copyright-statement>Copyright: &#x00A9; Gan et al.</copyright-statement>
<copyright-year>2019</copyright-year>
<license license-type="open-access">
<license-p>This is an open access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by-nc-nd/4.0/">Creative Commons Attribution-NonCommercial-NoDerivs License</ext-link>, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.</license-p></license>
</permissions>
<abstract>
<p>The adenosine 5&#x2032;-triphosphate binding cassette subfamily B member (<italic>ABCB</italic>)11 gene is involved in bile transport, and mutations in this gene are associated with cholestasis and cholelithiasis. Therefore, the aim of the present study was to investigate the association between <italic>ABCB11</italic> gene mutation and primary intrahepatic stone (PIS)s and to investigate the mechanism through which <italic>ABCB11</italic> gene mutations affect the expression of the corresponding protein. Mutations of the <italic>ABCB11</italic> gene in 443 PIS patients and 560 healthy participants were detected by exon sequencing. The expression levels of <italic>ABCB11</italic> mRNA and bile salt export pump (BSEP) protein in the liver tissues of patients with PISs were measured by quantitative polymerase chain reaction and western blot analysis. The mutant plasmids constructed by site-directed mutagenesis of the human <italic>BSEP</italic> gene were transfected into human embryonic kidney 293 (293) cells and Madin-Darby canine kidney (MDCK) cells, and the expression and distribution of rs118109635 of BSEP was measured. There were two significant mutations in the <italic>ABCB11</italic> gene of the PIS patients compared with the healthy population; a missense mutation, rs118109635 (P=0.025), and a synonymous mutation, rs497692 (P=0.006). The two mutations were associated with the occurrence of preoperative jaundice (P=0.026, and P=0.011, respectively). The expression levels of BSEP in PIS patients with the missense mutation rs118109635 was decreased, whereas its mRNA expression levels remained unchanged. In PIS patients with the synonymous mutation rs497692, the expression levels of <italic>ABCB11</italic> were decreased at both the mRNA and protein level. It was also found that mutation A865V reduced the expression levels of BSEP in 293 cells at the cellular level; its distribution in MDCK cell membranes was decreased, whereas its mRNA levels remained unchanged. The mutated loci at rs118109635 and rs497692 of the <italic>ABCB11</italic> gene were correlated with PISs, causing a decreased expression of BSEP and reduced distribution of the protein in the cell membrane. Therefore, mutations at rs118109635 and rs497692 of the <italic>ABCB11</italic> gene may be risk factors for PISs.</p>
</abstract>
<kwd-group>
<kwd>primary intrahepatic stone</kwd>
<kwd>adenosine 5&#x2032;-triphosphate binding cassette subfamily B member 11</kwd>
<kwd>mutation</kwd>
<kwd>bile salt export pump</kwd>
<kwd>expression</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<sec sec-type="intro">
<title>Introduction</title>
<p>Primary intrahepatic stone (PIS) are rare among patients in Western countries (<xref rid="b1-mmr-19-01-0195" ref-type="bibr">1</xref>,<xref rid="b2-mmr-19-01-0195" ref-type="bibr">2</xref>). As reported in the literature, most PIS patients are Asian, and there is a high incidence of the disease in East Asia (<xref rid="b3-mmr-19-01-0195" ref-type="bibr">3</xref>,<xref rid="b4-mmr-19-01-0195" ref-type="bibr">4</xref>). Currently, PISs remain a common biliary system disease in Southwest China (<xref rid="b5-mmr-19-01-0195" ref-type="bibr">5</xref>). Approximately 200&#x2013;250 surgical procedures for PISs are performed in the Southwest Hospital, Third Military Medical University (Chongqing, China), each year.</p>
<p>Relapse and persistent progress of PISs to an advanced stage may result in biliary cirrhosis or intrahepatic cholangiocarcinoma (<xref rid="b6-mmr-19-01-0195" ref-type="bibr">6</xref>), two of the most important causes of mortality due to benign biliary tract disease. At present, the etiology of PISs has not been fully elucidated; it is generally believed that chronic inflammation of the bile duct and bile stasis promote the formation of gallstones and that other factors such as bacterial infection, malnutrition and living environment may also be involved (<xref rid="b7-mmr-19-01-0195" ref-type="bibr">7</xref>&#x2013;<xref rid="b9-mmr-19-01-0195" ref-type="bibr">9</xref>). The distribution of PIS cases in Eastern and Western countries and in the northern and southern parts of China differs notably, reflecting the strong racial and regional characteristics of PIS (<xref rid="b10-mmr-19-01-0195" ref-type="bibr">10</xref>). Therefore, the possible role of genetic background in the pathogenesis of PISs is worthy of further investigation.</p>
<p>The protein encoded by the ATP binding cassette subfamily B member (<italic>ABCB</italic>)11 gene is known as the bile salt export pump (BSEP). Its primary function is to transport bile acid from the cell cavity to the bile duct and to facilitate cholesterol dissolution and inhibit its supersaturated crystallization (<xref rid="b11-mmr-19-01-0195" ref-type="bibr">11</xref>&#x2013;<xref rid="b13-mmr-19-01-0195" ref-type="bibr">13</xref>). In a previous study of hepatolithiasis, it was found that the mRNA and protein expression levels of sodium/taurine co-aligners and cholesterol 7&#x03B1; hydroxylase, which are associated with bile salt and cholesterol metabolism, were significantly lower in hepatolithiasis patients than in normal controls (<xref rid="b14-mmr-19-01-0195" ref-type="bibr">14</xref>). Therefore, this phenomenon needs to be investigated further.</p>
<p>It has been demonstrated that mutation of the <italic>ABCB11</italic> gene is closely associated with cholestasis, including benign recurrent intrahepatic cholestasis 2 (<xref rid="b15-mmr-19-01-0195" ref-type="bibr">15</xref>,<xref rid="b16-mmr-19-01-0195" ref-type="bibr">16</xref>), progressive familial intrahepatic cholestasis 2 (<xref rid="b17-mmr-19-01-0195" ref-type="bibr">17</xref>&#x2013;<xref rid="b19-mmr-19-01-0195" ref-type="bibr">19</xref>), and intrahepatic cholestasis of pregnancy (<xref rid="b20-mmr-19-01-0195" ref-type="bibr">20</xref>&#x2013;<xref rid="b22-mmr-19-01-0195" ref-type="bibr">22</xref>), and bile duct stones often form in patients with BSEP deletion syndrome caused by <italic>ABCB11</italic> gene mutations (<xref rid="b23-mmr-19-01-0195" ref-type="bibr">23</xref>). In our previous study (<xref rid="b5-mmr-19-01-0195" ref-type="bibr">5</xref>), two missense (rs2287617 and rs2287622) and one synonymous (rs3815675) mutations were detected in exons 9, 13 and 4, respectively. However, the distribution of allele frequencies for these three mutations was not significantly different between patients and controls. Conversely, one missense mutation (rs118109635) and two synonymous mutations (rs497692 and rs2287616) were also detected in exons 21, 24 and 9, respectively. The distribution of these allele frequencies were significantly different in PIS patients compared with those in the healthy group. The two mutations (rs118109635 and rs497692) in ABCB11 as well as decreased expression of its encoded protein BSEP, were closely associated with the recurrence of cholangitis and the level of jaundice of the PIS patients (<xref rid="b5-mmr-19-01-0195" ref-type="bibr">5</xref>). The aim of the present study was to further verify the association between <italic>ABCB11</italic> gene mutations and clinical morbidity in PIS patients on the basis of an expanded sample size. In addition, the present study focused on the observation of the effects of <italic>ABCB11</italic> gene mutations on BSEP expression and on its distribution in the cell membrane. The mRNA and protein expression levels of the <italic>ABCB11</italic> gene in the liver tissues of PIS patients were determined using quantitative polymerase chain reaction (PCR) and western blot analysis. To further investigate the effect of these mutations on the protein&#x0027;s expression and distribution, a wild-type plasmid containing all open reading frames of the human <italic>ABCB11</italic> gene was constructed, and mutant plasmids were subsequently constructed by site-directed mutagenesis. After transfection of 293 cells with the mutant plasmids, changes in the expression of <italic>ABCB11</italic> mRNA and cell membrane BSEP were detected. Subsequently, based on the polar characteristics of Madin-Darby canine kidney (MDCK) cells, the effect of the <italic>ABCB11</italic> gene mutation on the distribution of BSEP at the cellular level was analyzed using immunofluorescence and laser confocal scanning microscopy.</p>
</sec>
<sec sec-type="materials|methods">
<title>Materials and methods</title>
<sec>
<title/>
<sec>
<title>Clinical samples</title>
<p>A total of 443 patients (male, 134; female, 309; age range 17&#x2013;81 years; male/female, 0.434) with PISs treated in the Southwest Hospital, Third Military Medical University (Chongqing, China) from December 2012 to May 2016 were included in the present study. Furthermore, 560 healthy individuals (male 245; female 315; age range 16&#x2013;78 years; male/female, 0.778) were selected from the physical examination center of the same hospital as the control group. The inclusion criteria of the experimental group were confirmed diagnosis of PISs by imaging study; no prior liver resection, no history of chronic liver disease, no hepatitis A, B, or C virus or cytomegalovirus infection, no gallstones, and no tumors. The inclusion criteria of the control group were confirmed absence of PISs by imaging, no history of chronic liver disease, no hepatitis A, B, or C virus or cytomegalovirus infection, and no gallstones. Five milliliters of peripheral blood were collected from each of the above PIS patients and healthy participants, and the lymphocytes were immediately separated using human peripheral lymphocyte separation medium (Tianjin Hao Yang Biological Manufacturing Co., Ltd., Tianjin, China; <uri xlink:href="http://www.tbdscience.com">http://www.tbdscience.com</uri>). The obtained samples were stored in a &#x2212;80&#x00B0;C freezer.</p>
<p>Clinical data, including information on sex, age, height, body weight, indicators in the preoperative liver function test, preoperative serum jaundice, recurrent cholangitis, and stone type were collected (<xref rid="tI-mmr-19-01-0195" ref-type="table">Tables I</xref> and <xref rid="tII-mmr-19-01-0195" ref-type="table">II</xref>). Stone removal of the PIS patients was confirmed by abdominal ultrasound, abdominal CT, cholangiography and magnetic resonance imaging. Postoperatively, the patients were followed up every three months, and a stone found at follow-up was considered as a recurrence. The experiments were approved by the Ethics Committee of the Southwest Hospital of the Third Military Medical University of China. Written informed consent was obtained from all participants.</p>
</sec>
<sec>
<title>Genomic DNA extraction, primer design and ABCB11 gene exon sequencing</title>
<p>The Blood Genome DNA Extraction kit (Takara Bio, Inc., Otsu, Japan) was used to extract genomic DNA from the peripheral blood lymphocytes of patients and controls. In the 28 exon coding regions of the <italic>ABCB11</italic> gene, the first exon does not participate in the coding of the protein, so Primer 6.0 primer design software (<uri xlink:href="http://primerdesign.co.uk/home">primerdesign.co.uk/home</uri>) was used to design 27 pairs of primers for the PCR amplification of the remaining exons (<xref rid="tIII-mmr-19-01-0195" ref-type="table">Table III</xref>). The PCR amplification was performed with the PrimeSTAR Max DNA Polymerase kit (Takara Bio, Inc.) and the cycling conditions were as follow: 30 cycles of 98&#x00B0;C for 10 sec, 55&#x00B0;C for 5 sec and 72&#x00B0;C for 30 sec. The amplified products were then sequenced using the ABI 3730XL Gene Analyzer (Applied Biosystems; Thermo Fisher Scientific, Inc., Waltham, MA, USA).</p>
</sec>
<sec>
<title>Extraction of mRNA and reverse transcription-quantitative PCR (RT-qPCR)</title>
<p>Total mRNA was extracted from the 200 mg freshly frozen liver tissue of the PIS patients and the control group using the Eastep Super Total RNA Extraction kit (Promega Corporation, Madison, WI, USA). PIS patient and control group liver tissue samples were cryopreserved in liquid nitrogen at the time of excision to facilitate RNA extraction and RT-qPCR analysis. The specific experimental procedure was conducted according to the manufacturer&#x0027;s protocol. DNA removal and reverse transcription were performed with the PrimeScript<sup>&#x2122;</sup> RT Reagent kit with gDNA Eraser (Takara Bio, Inc.) at 42&#x00B0;C for 2 min. Finally, the mRNA expression of the <italic>ABCB11</italic> gene in the PIS patients was detected by RT-qPCR using SYBR Premix Ex Taq II (Takara Bio, Inc.) and a quantitative fluorescence PCR analyzer.</p>
<p>Total RNA was extracted from 293 cells 48 h after transfection with wild-type and mutant A856V plasmids using the Eastep Super Total RNA Extraction kit (Promega Corporation), followed by DNA removal and reverse transcription using the PrimeScript<sup>&#x2122;</sup> RT Reagent kit with gDNA Eraser (Takara Bio, Inc). The mRNA expression was detected by RT-qPCR using SYBR Premix Ex Taq II (Takara Bio, Inc.) and a quantitative fluorescence PCR analyzer.</p>
<p>The results of freshly frozen liver tissues and cells were normalized to the expression of &#x03B2;-actin. The primers for BSEP were forward primer, 5&#x2032;-dTTGCCTTTGCCCAGTGCATCAT-3&#x2032; and reverse primer, 5&#x2032;-dGGTTGTCGGTCCAGCAGTTGAA-3&#x2032; (BSEP), and those for &#x03B2;-actin were forward primer, 5&#x2032;-dCCTGGCACCCAGCACAAT-3&#x2032; and reverse primer, 5&#x2032;-dGGGCCGGACTCGTCATAC-3&#x2032;. For the quantitative measurement of <italic>ABCB11</italic> mRNA expression, RT-qPCR was performed using a CFX96 Real-Time system (Bio-Rad Laboratories, Inc., Hercules, CA, USA) with the following cycling conditions: 95&#x00B0;C for 30 sec, followed by 40 cycles of 95&#x00B0;C for 5 sec and 60&#x00B0;C for 30 sec (<xref rid="b24-mmr-19-01-0195" ref-type="bibr">24</xref>).</p>
</sec>
<sec>
<title>Western blot analysis</title>
<p>Membrane proteins were extracted from the liver tissues of PIS patients and 293 cells transfected with wild-type and mutant A856V <italic>ABCB11</italic>, using the Mem-PER<sup>&#x2122;</sup> Plus Membrane Protein Extraction kit (Thermo Fisher Scientific, Inc.) according to the manufacturer&#x0027;s protocol. The Bicinchoninic Protein Quantification kit (CWBiotech, Beijing, China) was used for protein concentration determination. Equal amounts of protein (20 &#x00B5;g) were separated by 6&#x0025; SDS-PAGE and transferred to polyvinylidene fluoride (PVDF) membranes (EMD Millipore, Billerica, MA, USA), which were blocked and incubated with primary antibodies overnight at 4&#x00B0;C. The primary antibodies used in this study included the following: Anti-BSEP (1:500; cat. no. 155421; Abcam, Cambridge, UK) and anti-Na/K-ATPase (1:1,000; cat. no. 58475; Abcam). The membranes were washed with Tris-buffered saline/Tween-20 and incubated with a horseradish peroxidase (HRP)-conjugated secondary antibody for 2 h at room temperature. The SuperSignal West Femto Substrate Trial kit (Thermo Fisher Scientific, Inc.) was used for signal detection.</p>
</sec>
<sec>
<title>Plasmids and site-directed mutagenesis</title>
<p>The wild-type plasmid pEZ-M02-BSEP contains all the open reading frames (GeneCopoeia Inc., Rockville, MD, USA) of the <italic>ABCB11</italic> gene. This plasmid was used as a template to obtain the A856V mutation by site-directed mutagenesis (<xref rid="b25-mmr-19-01-0195" ref-type="bibr">25</xref>). The <italic>ABCB11</italic> coding sequences of the above plasmids were verified by sequencing.</p>
</sec>
<sec>
<title>Cell culture and plasmid transfection</title>
<p><italic>A total of</italic> 293 cells and MDCK cells obtained from the Cell Bank of the Chinese Academy of Sciences were cultured in Dulbecco&#x0027;s modified Eagle&#x0027;s medium (Gibco; Thermo Fisher Scientific, Inc.) with 1&#x0025; penicillin-streptomycin solution (Beyotime Institute of Biotechnology, Haimen, China) and 10&#x0025; fetal bovine serum (Gibco; Thermo Fisher Scientific, Inc.) at 37&#x00B0;C in a 5&#x0025; CO<sub>2</sub> humidified atmosphere. A total of 5&#x00D7;10<sup>5</sup> 293 cells were seeded in 6-well plates and transiently transfected with 2,500 ng DNA and Lipofectamine<sup>&#x00AE;</sup> (Invitrogen; Thermo Fisher Scientific, Inc.) per well after 24 h at 37&#x00B0;C humidified atmosphere containing 5&#x0025; CO<sub>2</sub> when the cell confluence reached 80&#x0025;. A total of 1&#x00D7;10<sup>5</sup> MDCK cells were seeded in 24-well plates and transiently transfected with 500 ng of DNA and Lipofectamine<sup>&#x00AE;</sup> (Invitrogen; Thermo Fisher Scientific, Inc.) per well after 24 h at 37&#x00B0;C humidified atmosphere containing 5&#x0025; CO<sub>2</sub> when the cell confluence reached 70&#x0025;. The transfected cells were incubated at 37&#x00B0;C humidified atmosphere containing 5&#x0025; CO<sub>2</sub>, and were harvested 48 h later for subsequent experiments.</p>
</sec>
<sec>
<title>Immunofluorescence and laser confocal microscopy</title>
<p>The MDCK cells were seeded on slides 24 hour at room temperature prior to transfection. Forty-eight hours after transfection, the cells were fixed with 2&#x0025; paraformaldehyde for 10 min at room temperature and infiltrated with 1&#x0025; Triton X-100 (Sigma-Aldrich; Merck KGaA, Darmstadt, Germany) for 5 min at room temperature, followed by blocking with 10&#x0025; goat serum (Gibco; Thermo Fisher Scientific, Inc.) for 1 h at room temperature. Following rinsing with PBS, one group of 1&#x00D7;10<sup>5</sup> cells was incubated with rabbit anti-BSEP polyclonal antibody (1:100; cat. no. 155421; Abcam) and chicken anti-Na/K-ATPase monoclonal antibody (1:200; cat. no. 353; Abcam) overnight at 4&#x00B0;C, then washed with PBS and incubated with goat anti-rabbit Alexa Fluor 488 (1:200; cat. no. 150077; Abcam) and goat anti-chicken Alexa Fluor 647 (1:200; cat. no. 150171; Abcam) at room temperature for 2 h. Another group of 1&#x00D7;10<sup>5</sup> cells was incubated with rabbit anti-BSEP polyclonal antibody (1:100; cat. no. 155421) and mouse anti-calnexin polyclonal antibody (1:200; cat. no. 112995) overnight at 4&#x00B0;C, then washed with PBS and incubated with goat anti-rabbit Alexa Fluor 488 (1:200; cat. no. 150077) and goat anti-mouse Alexa Fluor 647 (1:200; cat. no. 150115; all Abcam) at room temperature for 2 h. Images of the cells were obtained using a Leica CTR 4000 laser scanning confocal microscope.</p>
</sec>
<sec>
<title>Statistical analysis</title>
<p>The genotype frequencies at all mutation loci were directly obtained by counting and the use of the Hardy-Weinberg equilibrium. The unconditional logistic regression model was used to evaluate the correlation between the <italic>ABCB11</italic> gene mutations and PISs. The evaluation indicators included odds ratio (OR) and 95&#x0025; confidence interval (CI); the odds ratio (OR) was corrected for sex, age and body mass index. The correlation between the genotype and the clinical data of the PIS patients was analyzed using the Chi-square test. All experimental data were analyzed by SPSS software (PASW Statistics 22, IBM Corp., Armonk, NY, USA) or Graphpad Prism (v6.0 for Windows; GraphPad Software, Inc., La Jolla, CA, USA). Data are presented as the mean &#x00B1; standard deviation of four independent experiments. Statistical analyses shown in the figures were performed using paired Student&#x0027;s t-tests or one-way analysis of variance with least significant difference post hoc test. P&#x003C;0.05 was considered to indicate a statistically significant result.</p>
</sec>
</sec>
</sec>
<sec sec-type="results">
<title>Results</title>
<sec>
<title/>
<sec>
<title>ABCB11 gene mutations may be associated with the pathogenesis of PISs</title>
<p>In the present study, peripheral blood lymphocytes were collected from 443 PIS patients and 560 healthy individuals for <italic>ABCB11</italic> exon sequencing. Six mutations were detected, including three missense mutations and three synonymous mutations (<xref rid="tIV-mmr-19-01-0195" ref-type="table">Table IV</xref>). The missense mutation rs118109635 and the synonymous mutation rs497692 were detected within exons 21 and 24, of the <italic>ABCB11</italic> gene, respectively. The gene frequency distributions of the two mutational loci in the PIS patients and the healthy control group differed significantly (P=0.025 and P=0.017, respectively). In addition, the missense mutations rs2287617 and rs2287622 and the synonymous mutations rs3815675 and rs2287616 were located in exons 9, 13, 4 and 9 of the <italic>ABCB11</italic> gene, respectively. However, these four mutations showed no significant differences between PIS patients and healthy controls (P&#x003E;0.05). These results indicated that there are two significant <italic>ABCB11</italic> gene mutations in the PIS patients (rs118109635 and rs497692), consistent with previous findings (<xref rid="b5-mmr-19-01-0195" ref-type="bibr">5</xref>).</p>
</sec>
<sec>
<title>Correlation of ABCB11 gene mutations and clinical characteristics of PIS patients</title>
<p>The analysis of the <italic>ABCB11</italic> gene mutations and the relevant clinical data for the PIS patients in the present study (<xref rid="tII-mmr-19-01-0195" ref-type="table">Table II</xref>) showed that the genotype of the rs118109635 mutation (CT genotype) of the <italic>ABCB11</italic> gene was correlated with preoperative jaundice (P=0.026) and that the homozygous genotype (GG) and the heterozygous genotype (GA) caused by mutations at the rs497692 locus in the PIS patients in the present study were associated with preoperative jaundice (P=0.011). In addition, the mutation at the rs2287617 locus of the <italic>ABCB11</italic> gene was associated with the recurrence of PISs (P=0.009). Therefore, the rs118109635 and rs497692 mutations of the <italic>ABCB11</italic> gene are closely associated with the clinical characteristics of PISs.</p>
</sec>
<sec>
<title>Effects of ABCB11 gene mutations in PIS patients on the expression of ABCB11 mRNA and its encoded protein</title>
<p>The expression of <italic>ABCB11</italic> mRNA in the liver tissues of PIS patients with different genotypes was measured by RT-qPCR. The results showed that whereas the mRNA expression levels of the mutant rs497692 were decreased, the rs118109635 mutation had no significant impact on <italic>ABCB11</italic> mRNA expression levels (<xref rid="f1-mmr-19-01-0195" ref-type="fig">Fig. 1C</xref>). The expression of BSEP in the liver tissue of PIS patients with different genotypes was detected by western blot analysis; BSEP was detected as a 140&#x2013;150 kDa band (<xref rid="f1-mmr-19-01-0195" ref-type="fig">Fig. 1A</xref>). The results revealed that the expression of BSEP was significantly decreased in patients with the <italic>ABCB11</italic> gene mutations rs118109635 and rs497692 (<xref rid="f1-mmr-19-01-0195" ref-type="fig">Fig. 1A and B</xref>). Thus, the <italic>ABCB11</italic> gene mutations (rs118109635 and rs497692) may affect the transcription and translation of the <italic>ABCB11</italic> gene.</p>
</sec>
<sec>
<title>Expression of mutated BSEP on the 293 cell membrane</title>
<p>The aim of this experiment was to investigate the effect of <italic>ABCB11</italic> gene mutation on BSEP expression and its subcellular localization. Therefore, 293 and MDCK cell lines were used, albeit neither express BSEP protein, as experimental cells, and investigated the effect of <italic>ABCB11</italic> gene mutations on protein expression and subcellular localization by transfection of <italic>ABCB11</italic> mutant plasmid and wild-type plasmid. Due to the high expression of BSEP protein in liver cell lines, it may interfere with the observation of cell transfection experiment results. The 293 and MDCK cells are polarized cells commonly used to study trafficking of membrane proteins (<xref rid="b17-mmr-19-01-0195" ref-type="bibr">17</xref>,<xref rid="b23-mmr-19-01-0195" ref-type="bibr">23</xref>). The transfection efficiency in MDCK cells was quite low (<xref rid="b25-mmr-19-01-0195" ref-type="bibr">25</xref>). Thus, to determine the effects of <italic>ABCB11</italic> mutations on BSEP expression, 293 cells were used. Plasmids containing wild-type and mutated BSEP cDNA were constructed and transfected into 293 cells (<xref rid="b25-mmr-19-01-0195" ref-type="bibr">25</xref>) to determine the effects of the A865V mutation on BSEP expression. The expression of BSEP in the A865V mutant measured by western blot analysis was significantly lower than that in wild-type 293 cells (<xref rid="f2-mmr-19-01-0195" ref-type="fig">Fig. 2A and B</xref>). Although the A865V mutation had no apparent effect on BSEP mRNA expression levels (<xref rid="f2-mmr-19-01-0195" ref-type="fig">Fig. 2C</xref>), the decrease in BSEP protein expression levels may be associated with the degradation of BSEP due to its retention in the endoplasmic reticulum as a result of a change in its three-dimensional structure (<xref rid="b17-mmr-19-01-0195" ref-type="bibr">17</xref>). Thus, the above results indicated that the A865V mutation downregulated the translocation of the BSEP protein.</p>
</sec>
<sec>
<title>Subcellular localization of wild-type and mutant BSEP</title>
<p>The cells used in this experiment needed to undergo multiple antibody incubation and PBS washing steps. The 293 cells have poor adhesion and can easily be detached from the slide during multiple incubation and washing (<xref rid="b25-mmr-19-01-0195" ref-type="bibr">25</xref>). Thus, the impact of <italic>ABCB11</italic> mutations against BSEP subcellular localization was assessed in MDCK cells. MDCK cells were transiently transfected with wild-type and mutant plasmids, and the expressed proteins were labeled and stained with antibodies to BSEP, calnexin and Na/K-ATPase to determine the subcellular location of BSEP by immunofluorescence confocal microscopy. Calnexin and Na/K-ATPase were used as markers for the endoplasmic reticulum and the cell membrane, respectively. Results demonstrated that wild-type BSEP was distributed inside the cells and in the cell membrane, whereas the A856V mutant BSEP was mainly distributed inside the cells and showed significantly reduced distribution in the cell membrane (<xref rid="f3-mmr-19-01-0195" ref-type="fig">Fig. 3</xref>). Thus, the A856V mutation affected the subcellular localization of BSEP.</p>
</sec>
</sec>
</sec>
<sec sec-type="discussion">
<title>Discussion</title>
<p>The present study demonstrated that two mutations in the <italic>ABCB11</italic> gene, rs118109635 (C&#x003E;T) and rs497692 (A&#x003E;G), are associated with the pathogenesis of PISs, and these mutations are closely associated with the occurrence of preoperative jaundice in patients with PISs. Compared with the wild-type protein, the expression of BSEP in the liver tissues of patients with mutations (rs118109635 and rs497692) was significantly decreased, and the decrease in protein expression levels was evident is the rs497692 homozygous genotype. Although the <italic>ABCB11</italic> mRNA expression levels of the mutant rs497692 heterozygote and homozygous genotypes were both decreased, the rs118109635 mutation had no significant effect on mRNA expression. The <italic>in vitro</italic> experiments showed that the A865V mutation significantly decreased BSEP protein expression levels in the cell membrane, indicating that the A865V mutation may affect the subcellular localization of BSEP.</p>
<p>According to existing reports, the incidence of PISs is high in East Asia, and its incidence in Southern China is significantly higher than in Northern China; thus, it is believed that the incidence of PISs displays very strong regional and ethnic differences (<xref rid="b1-mmr-19-01-0195" ref-type="bibr">1</xref>). The identified mutations in the <italic>ABCB11</italic> gene lead to defects in BSEP protein expression that can cause changes in bile salt content (<xref rid="b26-mmr-19-01-0195" ref-type="bibr">26</xref>), and it has been shown that mutations in this gene are associated with the pathogenesis of cholestasis (<xref rid="b27-mmr-19-01-0195" ref-type="bibr">27</xref>&#x2013;<xref rid="b29-mmr-19-01-0195" ref-type="bibr">29</xref>). Therefore, the role of <italic>ABCB11</italic> gene mutations in the pathogenesis of PISs was investigated. In the present study, <italic>ABCB11</italic> gene exon sequencing was performed on a large sample of 443 cases of PIS patients and 560 healthy individuals. Two mutations associated with the pathogenesis of PISs: The missense mutation rs118109635 and the synonymous mutation rs497692. This result is consistent with the findings reported in a previous study (<xref rid="b5-mmr-19-01-0195" ref-type="bibr">5</xref>). Additionally, analysis of the relevant clinical data showed that the <italic>ABCB11</italic> gene mutations rs118109635 and rs497692 were correlated with the occurrence of preoperative jaundice in PIS patients. Therefore, the role of <italic>ABCB11</italic> gene mutations in the pathogenesis of PISs is worthy of further investigation.</p>
<p>To further clarify the association between mutations rs118109635 and rs497692 and the pathogenesis of PISs, the mRNA expression levels of <italic>ABCB11</italic> in the liver tissue of the PIS patients was measured. The results showed that the missense mutation rs118109635 had no significant impact on <italic>ABCB11</italic> mRNA expression, but western blot analysis showed that BSEP expression levels were significantly reduced in patients with this mutation. Western blot analysis and confocal immunofluorescence microscopy experiments performed <italic>in vitro</italic> confirmed that mutation A865V (rs118109635) significantly decreased BSEP expression levels at the subcellular levels, with no significant change in the <italic>ABCB11</italic> mRNA expression levels. Thus, the rs118109635 mutation downregulated the expression of the transmembrane transporter BSEP in the cell membrane. Previous studies of <italic>ABCB11</italic> gene mutations confirmed that <italic>ABCB11</italic> gene missense mutations change the amino acid sequence of the BSEP protein and alter its three-dimensional structure (<xref rid="b30-mmr-19-01-0195" ref-type="bibr">30</xref>). Most misfolded proteins are degraded by proteases in the endoplasmic reticulum, ultimately leading to reduced protein expression levels of BSEP in the cell membranes (<xref rid="b17-mmr-19-01-0195" ref-type="bibr">17</xref>). Therefore, the missense mutation rs118109635 may be involved in the pathogenesis of PISs due to its effect on the expression of BSEP; this hypothesis awaits further confirmation.</p>
<p>Furthermore, to determine the role of mutation rs497692 in the pathogenesis of PISs, PIS clinical specimens were analyzed by RT-qPCR. The results showed that the expression mRNA expression levels of rs497692 was decreased and that the expression levels of mutant BSEP associated with the heterozygote and homozygous genotypes were significantly decreased compared to those of the wild-type gene and protein. The relevant studies demonstrated that mutation rs497692 of the <italic>ABCB11</italic> gene is a synonymous mutation that can change gene splicing by exon skipping, thus affecting the expression of mature mRNA and ultimately leading to a decrease in the cellular level of the encoded protein (<xref rid="b30-mmr-19-01-0195" ref-type="bibr">30</xref>). Thus, mutation rs497692 may serve an important role in the pathogenesis of PISs by altering the transcription level of the <italic>ABCB11</italic> gene.</p>
<p>A previous study of BSEP transport function showed no change in the bile transport activity of individual BSEP molecules in the cell membrane; instead, the decrease in BSEP transport function observed in the mutant is due to decreased molecular distribution of BSEP on the membrane, resulting in overall reduced bile transport by BSEP (<xref rid="b17-mmr-19-01-0195" ref-type="bibr">17</xref>). Therefore, the rs118109635 and rs497692 mutations decreased BSEP expression hepatocyte apical and bile duct membrane by different mechanisms, leading to reduced bile transport capacity in PIS patients, changes in bile composition, and stone formation. In addition, <italic>in vitro</italic> experiments have shown that administration of 4-butyl benzene increases the membrane expression of BSEP protein transcribed from the mutated <italic>ABCB11</italic> gene in the cell membrane (<xref rid="b31-mmr-19-01-0195" ref-type="bibr">31</xref>). These results may be beneficial in the treatment of PIS patients with reduced BSEP expression caused by the identified <italic>ABCB11</italic> gene mutation.</p>
<p>The present study has limitations. The regulatory mechanism of <italic>ABCB11</italic> gene mutation on mRNA and BSEP protein expression levels need to be studied further, and at the same time, <italic>ABCB11</italic> mutated rat models need to be used in order to further define the biological function of these mutations, and determine the specific role of <italic>ABCB11</italic> gene mutations in primary intrahepatic stone.</p>
<p>In conclusion, the present study confirmed that the <italic>ABCB11</italic> gene in patients with PISs displayed two disease-associated mutations, rs118109635 and rs497692. The rs497692 and rs118109635 mutations affected transcription and translation of the <italic>ABCB11</italic> gene and downregulated BSEP expression in the cell membrane, possibly affecting the transport of specific substrates by BSEP and eventually causing changes in bile composition that serve an important role in the pathogenesis of PISs. Therefore, mutations rsB8109635 and rs497692 of the <italic>ABCB11</italic> gene may be risk factors for PISs that can provide a reliable basis for improvement of the clinical treatment of PIS patients in the future.</p>
</sec>
</body>
<back>
<ack>
<title>Acknowledgements</title>
<p>The authors would like to thank The Institute of Hepatobiliary Surgery, Southwest Hospital, Third Military Medical University (Army Medical University), Chongqing, China, for providing laboratory facilities.</p>
</ack>
<sec>
<title>Funding</title>
<p>The present study was supported by grants from the National Natural Science Foundation of China (grant no. 81270535) and Southwest Hospital (grant no. SWH2016JCYB-10).</p>
</sec>
<sec>
<title>Availability of data and materials</title>
<p>The analyzed datasets generated during the study are available from the corresponding author on reasonable request.</p>
</sec>
<sec>
<title>Authors&#x0027; contributions</title>
<p>YH, LG and SP designed the study. LG and YH conducted the experiments and drafted the manuscript. LG, SP, JC, JB and PJ were involved in the statistical analysis. All authors read and approved the final manuscript.</p>
</sec>
<sec>
<title>Ethics approval and consent to participate</title>
<p>The experiments were approved by the Ethics Committee of the Southwest Hospital of the Third Military Medical University of China. Written informed consent was obtained from all participants.</p>
</sec>
<sec>
<title>Patient consent for publication</title>
<p>Not applicable.</p>
</sec>
<sec>
<title>Competing interests</title>
<p>The authors declare that they have no competing interests.</p>
</sec>
<glossary>
<def-list>
<title>Abbreviations</title>
<def-item><term>BSEP</term><def><p>bile salt export pump</p></def></def-item>
<def-item><term>BRIC2</term><def><p>benign recurrent intrahepatic cholestasis type 2</p></def></def-item>
<def-item><term>CBS</term><def><p>calcium bilirubinate stones</p></def></def-item>
<def-item><term>CI</term><def><p>confidence interval</p></def></def-item>
<def-item><term>CS</term><def><p>cholesterol stones</p></def></def-item>
<def-item><term>293</term><def><p>human embryonic kidney 293</p></def></def-item>
<def-item><term>HWE</term><def><p>Hardy-Weinberg Equilibrium</p></def></def-item>
<def-item><term>ICP</term><def><p>intrahepatic cholestasis of pregnancy</p></def></def-item>
<def-item><term>MDCK</term><def><p>Madin-Darby canine kidney</p></def></def-item>
<def-item><term>PFIC2</term><def><p>progressive familial intrahepatic cholestasis type 2</p></def></def-item>
<def-item><term>OR</term><def><p>odds ratio</p></def></def-item>
<def-item><term>PIS</term><def><p>primary intrahepatic stone</p></def></def-item>
<def-item><term>SNP</term><def><p>single nucleotide polymorphisms</p></def></def-item>
</def-list>
</glossary>
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<floats-group>
<fig id="f1-mmr-19-01-0195" position="float">
<label>Figure 1.</label>
<caption><p>Detection of mRNA and BSEP protein expression levels in PIS patients with different ABCB11 genotypes. (A) Representative western blot analysis using the liver tissues of PIS patients with different genotypes and (B) quantification of BSEP expression levels. (C) RT-qPCR was performed to measure the ABCB11 mRNA expression levels in the liver tissues of PIS patients with different genotypes. Data are presented as the mean &#x00B1; standard deviation (n=20; &#x002A;P&#x003C;0.05). BSEP, bile salt export pump; PIS, primary intrahepatic stone; WT, wild type.</p></caption>
<graphic xlink:href="MMR-19-01-0195-g00.tif"/>
</fig>
<fig id="f2-mmr-19-01-0195" position="float">
<label>Figure 2.</label>
<caption><p>Effect of ABCB11 gene missense mutations on BSEP expression. (A) 293 cells were transfected with wild-type or mutant ABCB11 plasmids and the expression of BSEP protein was detected by western blotting. &#x2018;Control&#x2019; represents the empty plasmid vector and (B) quantification of protein expression levels. (C) Total RNA was extracted from 293 cells 48 h after transfection with the wild-type and mutant ABCB11 plasmids, and RT-qPCR was performed to measure the ABCB11 mRNA expression levels. Data are presented as the mean &#x00B1; standard deviation from 4 independent experiments (&#x002A;P&#x003C;0.05). BSEP, bile salt export pump; PIS, primary intrahepatic stone; WT, wild type.</p></caption>
<graphic xlink:href="MMR-19-01-0195-g01.tif"/>
</fig>
<fig id="f3-mmr-19-01-0195" position="float">
<label>Figure 3.</label>
<caption><p>Analysis of wild-type and mutant BSEP distribution by immunofluorescence. The resulting distribution of fluorescence was observed by laser confocal microscopy. Green represents BSEP and red represents calnexin (left) and Na/K-ATPase (right) and yellow represents co-localization of the two proteins. In each panel, an X-Y image (upper) and an X-Z image (lower) are shown. The data shown were obtained from four independent experiments. Scale bar, 5 &#x00B5;m.</p></caption>
<graphic xlink:href="MMR-19-01-0195-g02.tif"/>
</fig>
<table-wrap id="tI-mmr-19-01-0195" position="float">
<label>Table I.</label>
<caption><p>Clinical data of patients with primary intrahepatic stones.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="bottom">Parameters</th>
<th align="center" valign="bottom">Patients, n</th>
<th align="center" valign="bottom">Median (range)</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">Sex, male/female</td>
<td align="center" valign="top">134/309</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">Age, male/female (years)</td>
<td align="center" valign="top">134/309</td>
<td align="center" valign="top">52 (17&#x2013;81)/49 (17&#x2013;78)</td>
</tr>
<tr>
<td align="left" valign="top">Height, male/female (cm)</td>
<td align="center" valign="top">134/309</td>
<td align="center" valign="top">167 (155&#x2013;187)/155 (144&#x2013;176)</td>
</tr>
<tr>
<td align="left" valign="top">Weight, male/female (kg)</td>
<td align="center" valign="top">134/309</td>
<td align="center" valign="top">60 (41&#x2013;93)/51 (36&#x2013;80)</td>
</tr>
<tr>
<td align="left" valign="top">Glutamic-pyruvic transaminase (IU/l)</td>
<td align="center" valign="top">443</td>
<td align="center" valign="top">39.0 (4.9&#x2013;587.0)</td>
</tr>
<tr>
<td align="left" valign="top">Glutamic oxalacetic transaminase (IU/l)</td>
<td align="center" valign="top">443</td>
<td align="center" valign="top">38.0 (10.0&#x2013;621.0)</td>
</tr>
<tr>
<td align="left" valign="top">Glutamyl transpeptidase (IU/l)</td>
<td align="center" valign="top">443</td>
<td align="center" valign="top">165.0 (7.0&#x2013;1968.0)</td>
</tr>
<tr>
<td align="left" valign="top">Alkaline phosphatase (IU/l)</td>
<td align="center" valign="top">443</td>
<td align="center" valign="top">167.0 (31.0&#x2013;1527.0)</td>
</tr>
<tr>
<td align="left" valign="top">Total protein (g/l)</td>
<td align="center" valign="top">443</td>
<td align="center" valign="top">71.2 (36.2&#x2013;87.2)</td>
</tr>
<tr>
<td align="left" valign="top">Albumin (g/l)</td>
<td align="center" valign="top">443</td>
<td align="center" valign="top">40.0 (20.4&#x2013;60.0)</td>
</tr>
<tr>
<td align="left" valign="top">Alobulin (g/l)</td>
<td align="center" valign="top">443</td>
<td align="center" valign="top">31.2 (14.4&#x2013;50.0)</td>
</tr>
<tr>
<td align="left" valign="top">Total bilirubin (&#x00B5;mol/l)</td>
<td align="center" valign="top">443</td>
<td align="center" valign="top">16.4 (5.4&#x2013;460.4)</td>
</tr>
<tr>
<td align="left" valign="top">Direct bilirubin (&#x00B5;mol/l)</td>
<td align="center" valign="top">443</td>
<td align="center" valign="top">3.8 (0.4&#x2013;271.9)</td>
</tr>
<tr>
<td align="left" valign="top">Indirect bilirubin (&#x00B5;mol/l)</td>
<td align="center" valign="top">443</td>
<td align="center" valign="top">12.1 (3.7&#x2013;196.6)</td>
</tr>
<tr>
<td align="left" valign="top">Total bile acid (&#x00B5;mol/l)</td>
<td align="center" valign="top">443</td>
<td align="center" valign="top">5.1 (0.2&#x2013;261.6)</td>
</tr>
</tbody>
</table>
</table-wrap>
<table-wrap id="tII-mmr-19-01-0195" position="float">
<label>Table II.</label>
<caption><p>Genotype distribution in groups of recurrence of cholangitis, preoperative jaundice, types of gallstone or recurrence of PIS.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th/>
<th align="center" valign="bottom" colspan="3">Recurrence of cholangitis</th>
<th align="center" valign="bottom" colspan="3">Preoperative jaundice</th>
<th align="center" valign="bottom" colspan="3">Types of gallstone</th>
<th align="center" valign="bottom" colspan="3">Recurrence of PIS</th>
</tr>
<tr>
<th/>
<th align="center" valign="bottom" colspan="3"><hr/></th>
<th align="center" valign="bottom" colspan="3"><hr/></th>
<th align="center" valign="bottom" colspan="3"><hr/></th>
<th align="center" valign="bottom" colspan="3"><hr/></th>
</tr>
<tr>
<th align="left" valign="bottom">Mutation (n)</th>
<th align="center" valign="bottom">Yes 309 (&#x0025;)</th>
<th align="center" valign="bottom">No 134 (&#x0025;)</th>
<th align="center" valign="bottom">P-value</th>
<th align="center" valign="bottom">Yes 143 (&#x0025;)</th>
<th align="center" valign="bottom">No 300 (&#x0025;)</th>
<th align="center" valign="bottom">P-value</th>
<th align="center" valign="bottom">CBS 420 (&#x0025;)</th>
<th align="center" valign="bottom">CS 23 (&#x0025;)</th>
<th align="center" valign="bottom">P-value</th>
<th align="center" valign="bottom">Yes 95 (&#x0025;)</th>
<th align="center" valign="bottom">No 348 (&#x0025;)</th>
<th align="center" valign="bottom">P-value</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">RS3815675T &#x003E;C</td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;TT (n=218)</td>
<td align="center" valign="top">154 (49.8)</td>
<td align="center" valign="top">64 (47.8)</td>
<td align="center" valign="top">0.222</td>
<td align="center" valign="top">71 (49.7)</td>
<td align="center" valign="top">147 (49.0)</td>
<td align="center" valign="top">0.895</td>
<td align="center" valign="top">209 (49.8)</td>
<td align="center" valign="top">9 (39.1)</td>
<td align="center" valign="top">0.426</td>
<td align="center" valign="top">46 (48.4)</td>
<td align="center" valign="top">172 (49.4)</td>
<td align="center" valign="top">0.266</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;TC (n=179)</td>
<td align="center" valign="top">128 (41.4)</td>
<td align="center" valign="top">51 (38.1)</td>
<td/>
<td align="center" valign="top">56 (39.2)</td>
<td align="center" valign="top">123 (41.0)</td>
<td/>
<td align="center" valign="top">169 (40.2)</td>
<td align="center" valign="top">10 (43.5)</td>
<td/>
<td align="center" valign="top">43 (45.3)</td>
<td align="center" valign="top">136 (39.1)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;CC (n=46)</td>
<td align="center" valign="top">27 (8.7)</td>
<td align="center" valign="top">19 (14.2)</td>
<td/>
<td align="center" valign="top">16 (11.1)</td>
<td align="center" valign="top">30 (10.0)</td>
<td/>
<td align="center" valign="top">42 (10.0)</td>
<td align="center" valign="top">4 (17.4)</td>
<td/>
<td align="center" valign="top">6 (6.3)</td>
<td align="center" valign="top">40 (11.5)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">RS2287616T &#x003E;C</td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;TT (n=210)</td>
<td align="center" valign="top">148 (47.9)</td>
<td align="center" valign="top">62 (46.3)</td>
<td align="center" valign="top">0.143</td>
<td align="center" valign="top">68 (47.6)</td>
<td align="center" valign="top">142 (47.3)</td>
<td align="center" valign="top">0.998</td>
<td align="center" valign="top">201 (47.9)</td>
<td align="center" valign="top">9 (39.1)</td>
<td align="center" valign="top">0.493</td>
<td align="center" valign="top">48 (50.5)</td>
<td align="center" valign="top">162 (46.6)</td>
<td align="center" valign="top">0.303</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;TC (n=186)</td>
<td align="center" valign="top">134 (43.4)</td>
<td align="center" valign="top">52 (38.8)</td>
<td/>
<td align="center" valign="top">60 (42.0)</td>
<td align="center" valign="top">126 (42.0)</td>
<td/>
<td align="center" valign="top">176 (41.9)</td>
<td align="center" valign="top">10 (43.5)</td>
<td/>
<td align="center" valign="top">41 (43.2)</td>
<td align="center" valign="top">145 (41.7)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;CC (n=47)</td>
<td align="center" valign="top">27 (8.7)</td>
<td align="center" valign="top">20 (14.9)</td>
<td/>
<td align="center" valign="top">15 (10.5)</td>
<td align="center" valign="top">32 (10.7)</td>
<td/>
<td align="center" valign="top">43 (10.2)</td>
<td align="center" valign="top">4 (17.4)</td>
<td/>
<td align="center" valign="top">6 (6.3)</td>
<td align="center" valign="top">41 (11.8)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">RS2287617G &#x003E;A</td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;GG (n=440)</td>
<td align="center" valign="top">308 (99.7)</td>
<td align="center" valign="top">132 (98.5)</td>
<td align="center" valign="top">0.168</td>
<td align="center" valign="top">141 (98.6)</td>
<td align="center" valign="top">299 (99.7)</td>
<td align="center" valign="top">0.510</td>
<td align="center" valign="top">418 (99.5)</td>
<td align="center" valign="top">22 (95.7)</td>
<td align="center" valign="top">0.369</td>
<td align="center" valign="top">92 (96.8)</td>
<td align="center" valign="top">348 (100)</td>
<td align="center" valign="top">0.009</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;GA (n=3)</td>
<td align="center" valign="top">1 (0.3)</td>
<td align="center" valign="top">2 (1.5)</td>
<td/>
<td align="center" valign="top">2 (1.4)</td>
<td align="center" valign="top">1 (0.3)</td>
<td/>
<td align="center" valign="top">2 (0.5)</td>
<td align="center" valign="top">1 (4.3)</td>
<td/>
<td align="center" valign="top">3 (3.2)</td>
<td align="center" valign="top">0 (0.0)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;AA (n=0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td/>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td/>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td/>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">RS2287622T &#x003E;C</td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;TT (n=39)</td>
<td align="center" valign="top">25 (8.1)</td>
<td align="center" valign="top">14 (10.4)</td>
<td align="center" valign="top">0.621</td>
<td align="center" valign="top">15 (10.5)</td>
<td align="center" valign="top">24 (8.0)</td>
<td align="center" valign="top">0.679</td>
<td align="center" valign="top">38 (9.0)</td>
<td align="center" valign="top">1 (4.4)</td>
<td align="center" valign="top">0.693</td>
<td align="center" valign="top">12 (12.6)</td>
<td align="center" valign="top">27 (7.8)</td>
<td align="center" valign="top">0.061</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;TC (n=187)</td>
<td align="center" valign="top">134 (43.4)</td>
<td align="center" valign="top">53 (39.6)</td>
<td/>
<td align="center" valign="top">60 (42.0)</td>
<td align="center" valign="top">127 (42.3)</td>
<td/>
<td align="center" valign="top">176 (41.9)</td>
<td align="center" valign="top">11 (47.8)</td>
<td/>
<td align="center" valign="top">46 (48.4)</td>
<td align="center" valign="top">141 (40.5)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;CC (n=217)</td>
<td align="center" valign="top">150 (48.5)</td>
<td align="center" valign="top">67 (50.0)</td>
<td/>
<td align="center" valign="top">68 (47.6)</td>
<td align="center" valign="top">149 (49.7)</td>
<td/>
<td align="center" valign="top">206 (49.0)</td>
<td align="center" valign="top">11 (47.8)</td>
<td/>
<td align="center" valign="top">37 (38.9)</td>
<td align="center" valign="top">180 (51.7)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">RS118109635C&#x003E;T</td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;CC (n=423)</td>
<td align="center" valign="top">295 (95.5)</td>
<td align="center" valign="top">128 (95.5)</td>
<td align="center" valign="top">0.980</td>
<td align="center" valign="top">132 (92.3)</td>
<td align="center" valign="top">291 (97.0)</td>
<td align="center" valign="top">0.026</td>
<td align="center" valign="top">402 (95.7)</td>
<td align="center" valign="top">21 (91.3)</td>
<td align="center" valign="top">0.634</td>
<td align="center" valign="top">90 (95.5)</td>
<td align="center" valign="top">333 (95.7)</td>
<td align="center" valign="top">0.692</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;CT (n=20)</td>
<td align="center" valign="top">14 (4.5)</td>
<td align="center" valign="top">6 (4.5)</td>
<td/>
<td align="center" valign="top">11 (7.7)</td>
<td align="center" valign="top">9 (3.0)</td>
<td/>
<td align="center" valign="top">18 (4.3)</td>
<td align="center" valign="top">2 (8.7)</td>
<td/>
<td align="center" valign="top">5 (5.3)</td>
<td align="center" valign="top">15 (4.3)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;TT (n=0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td/>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td/>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td/>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">RS497692A &#x003E;G</td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;AA (n=55)</td>
<td align="center" valign="top">37 (12.0)</td>
<td align="center" valign="top">18 (13.4)</td>
<td align="center" valign="top">0.828</td>
<td align="center" valign="top">13 (9.1)</td>
<td align="center" valign="top">42 (14.0)</td>
<td align="center" valign="top">0.011</td>
<td align="center" valign="top">51 (12.1)</td>
<td align="center" valign="top">4 (17.4)</td>
<td align="center" valign="top">0.599</td>
<td align="center" valign="top">13 (13.7)</td>
<td align="center" valign="top">42 (12.1)</td>
<td align="center" valign="top">0.560</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;AG (n=194)</td>
<td align="center" valign="top">138 (44.7)</td>
<td align="center" valign="top">56 (41.8)</td>
<td/>
<td align="center" valign="top">53 (37.1)</td>
<td align="center" valign="top">141 (47.0)</td>
<td/>
<td align="center" valign="top">183 (43.6)</td>
<td align="center" valign="top">11 (47.8)</td>
<td/>
<td align="center" valign="top">45 (47.4)</td>
<td align="center" valign="top">149 (42.8)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;GG (n=194)</td>
<td align="center" valign="top">134 (43.4)</td>
<td align="center" valign="top">60 (44.8)</td>
<td/>
<td align="center" valign="top">77 (53.8)</td>
<td align="center" valign="top">117 (39.0)</td>
<td/>
<td align="center" valign="top">186 (44.3)</td>
<td align="center" valign="top">8 (34.8)</td>
<td/>
<td align="center" valign="top">37 (38.9)</td>
<td align="center" valign="top">157 (45.1)</td>
<td/>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="tfn1-mmr-19-01-0195"><p>CBS, bilirubinate stones; CS, cholesterol stones; PIS, primary intrahepatic stones.</p></fn>
</table-wrap-foot>
</table-wrap>
<table-wrap id="tIII-mmr-19-01-0195" position="float">
<label>Table III.</label>
<caption><p>Primer pairs for the amplification of the <italic>ABCB11</italic> coding sequence.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="bottom">Exon</th>
<th align="center" valign="bottom">Forward primer</th>
<th align="center" valign="bottom">Reverse primer</th>
<th align="center" valign="bottom">Fragment length (bp)</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top" colspan="4"><italic>ABCB11</italic></td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;2</td>
<td align="left" valign="top">5&#x2032;-GGCTCTTTCAGGGAGTTATTAACC-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-ACTTGACCAGCTTGTCCTACTT-3&#x2032;</td>
<td align="center" valign="top">335</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;3</td>
<td align="left" valign="top">5&#x2032;-AGAGACAATATGAGCAGGAAGA-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-CTGCTTTGTGCCTTTGATATGA-3&#x2032;</td>
<td align="center" valign="top">266</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;4</td>
<td align="left" valign="top">5&#x2032;-TCTGTGAATCGCTAGTGAACCT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-ACACCCACTGCCATAAATCAAC-3&#x2032;</td>
<td align="center" valign="top">313</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;5</td>
<td align="left" valign="top">5&#x2032;-ATACGAACTCTGCCACTCAATT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-GTTAGATACCACTCCAGCTCAG-3&#x2032;</td>
<td align="center" valign="top">492</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;6</td>
<td align="left" valign="top">5&#x2032;-AATGTAATCTCTGGTGGCTTGA-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-TGTAGTTCTTAGGGCTTCTGAT-3&#x2032;</td>
<td align="center" valign="top">262</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;7</td>
<td align="left" valign="top">5&#x2032;-CTTAGTTCCCAAGAAGAGGCATT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-CACACCAAATTGCAGTACCTTG-3&#x2032;</td>
<td align="center" valign="top">487</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;8</td>
<td align="left" valign="top">5&#x2032;-GAGAGGCTGTTAATGCTATCCA-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-TGTTGCTAACTGTACTCAGGAA-3&#x2032;</td>
<td align="center" valign="top">410</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;9</td>
<td align="left" valign="top">5&#x2032;-TCTTCCTCCTGTCAATGATGTTAC-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-ATTACTCTGCTTAGCTCCCTCTT-3&#x2032;</td>
<td align="center" valign="top">412</td>
</tr>
<tr>
<td align="left" valign="top">10</td>
<td align="left" valign="top">5&#x2032;-TGCTCTGTGTTTGCGATGATTT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-TGTTTCCACAGACAGACTCCATA-3&#x2032;</td>
<td align="center" valign="top">435</td>
</tr>
<tr>
<td align="left" valign="top">11</td>
<td align="left" valign="top">5&#x2032;-TCTCTGCGTTAACATGGAAGAC-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-CAAGAGCGAAACTCCATCTCAA-3&#x2032;</td>
<td align="center" valign="top">418</td>
</tr>
<tr>
<td align="left" valign="top">12</td>
<td align="left" valign="top">5&#x2032;-GCAGAGATACGCCAAAGATGTT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-AAGACACCTCCATTCCCTATTACT-3&#x2032;</td>
<td align="center" valign="top">337</td>
</tr>
<tr>
<td align="left" valign="top">13</td>
<td align="left" valign="top">5&#x2032;-CACAGACACCGAGTATCAACAC-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-CCAGGACAGTCTCAATGTATGC-3&#x2032;</td>
<td align="center" valign="top">332</td>
</tr>
<tr>
<td align="left" valign="top">14</td>
<td align="left" valign="top">5&#x2032;-TTTCTGCCCATTGGTCAAGTAT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-CTCTTAGTTTCTCCCAGGAATGTA-3&#x2032;</td>
<td align="center" valign="top">331</td>
</tr>
<tr>
<td align="left" valign="top">15</td>
<td align="left" valign="top">5&#x2032;-GATCACTGTCAGAAGCCATCAA-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-TATCAACTACTCCCATCCCTCC-3&#x2032;</td>
<td align="center" valign="top">336</td>
</tr>
<tr>
<td align="left" valign="top">16</td>
<td align="left" valign="top">5&#x2032;-TCTAATGTCTGCACAGCCTATT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-GTTGGGAGAACAGTGAGTATTGA-3&#x2032;</td>
<td align="center" valign="top">441</td>
</tr>
<tr>
<td align="left" valign="top">17</td>
<td align="left" valign="top">5&#x2032;-TTGCTACTTCTGATGGACTTCTC-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-AGGATTAGGACTACAGAGGACTC-3&#x2032;</td>
<td align="center" valign="top">437</td>
</tr>
<tr>
<td align="left" valign="top">18</td>
<td align="left" valign="top">5&#x2032;-AACTTGGACACCAGTTGATCCT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-TAGTCTGACTTGAAACACTGCTAG-3&#x2032;</td>
<td align="center" valign="top">300</td>
</tr>
<tr>
<td align="left" valign="top">19</td>
<td align="left" valign="top">5&#x2032;-CCATATCCCATAGACATTTGAGGT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-ATGAGAAGAAGAAAGCTAGTCCAG-3&#x2032;</td>
<td align="center" valign="top">335</td>
</tr>
<tr>
<td align="left" valign="top">20</td>
<td align="left" valign="top">5&#x2032;-CCACCAGAATGATACATTTCCTAC-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-TGAAGAGGGAGATGTTAGAGAA-3&#x2032;</td>
<td align="center" valign="top">405</td>
</tr>
<tr>
<td align="left" valign="top">21</td>
<td align="left" valign="top">5&#x2032;-GCAATGGGCTGTGTATCTCTTT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-GTCAGTGTTAGAAGCAGTGGAA-3&#x2032;</td>
<td align="center" valign="top">444</td>
</tr>
<tr>
<td align="left" valign="top">22</td>
<td align="left" valign="top">5&#x2032;-TCTGAGACGGGTTGATTGCTTT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-GCTTCCTTCAGTCTCTTCGTACTA-3&#x2032;</td>
<td align="center" valign="top">331</td>
</tr>
<tr>
<td align="left" valign="top">23</td>
<td align="left" valign="top">5&#x2032;-CCACTGAAATGTCACGAAAGGA-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-TGGAGACAGAAGAATACACAGAAG-3&#x2032;</td>
<td align="center" valign="top">524</td>
</tr>
<tr>
<td align="left" valign="top">24</td>
<td align="left" valign="top">5&#x2032;-ATGCTTGTTCAGTCCTCTTCTT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-CCTGTGTCCATGTGTTCTGTT-3&#x2032;</td>
<td align="center" valign="top">560</td>
</tr>
<tr>
<td align="left" valign="top">25</td>
<td align="left" valign="top">5&#x2032;-TGAAGGTATCTCAAGCAGGGATT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-AAAGTGAGTCTGGCAAAGCAAA-3&#x2032;</td>
<td align="center" valign="top">397</td>
</tr>
<tr>
<td align="left" valign="top">26</td>
<td align="left" valign="top">5&#x2032;-TTAGCCTTGGGATTGTTAGTCTG-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-CACTCTGGTCATTCTACTTCTCC-3&#x2032;</td>
<td align="center" valign="top">402</td>
</tr>
<tr>
<td align="left" valign="top">27</td>
<td align="left" valign="top">5&#x2032;-GAGGAGACCTTGACATGAGTTC-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-GGTTCCACAAAGTATTGCCAAT-3&#x2032;</td>
<td align="center" valign="top">362</td>
</tr>
<tr>
<td align="left" valign="top">28</td>
<td align="left" valign="top">5&#x2032;-GGATTGTTATTCAGGTCGTGTT-3&#x2032;</td>
<td align="left" valign="top">5&#x2032;-TTAGCTTGGATTCCGATGTAGG-3&#x2032;</td>
<td align="center" valign="top">462</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="tfn2-mmr-19-01-0195"><p><italic>ABCB11</italic>, adenosine 5&#x2032;-triphosphate binding cassette subfamily B member.</p></fn>
</table-wrap-foot>
</table-wrap>
<table-wrap id="tIV-mmr-19-01-0195" position="float">
<label>Table IV.</label>
<caption><p>Distribution of six mutations, and the association between the mutations and PIS.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="bottom">Mutation</th>
<th align="center" valign="bottom">Amino acid change</th>
<th align="center" valign="bottom">Genotype</th>
<th align="center" valign="bottom">Controls (&#x0025;) n=560</th>
<th align="center" valign="bottom">Cases (&#x0025;) n=443</th>
<th align="center" valign="bottom">Adjusted OR (95&#x0025; CI)</th>
<th align="center" valign="bottom">P-value</th>
<th align="center" valign="bottom">P-value for HWE in control</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">s3815675</td>
<td align="left" valign="top">Synonymous</td>
<td align="left" valign="top">TT</td>
<td align="center" valign="top">280 (50.0)</td>
<td align="center" valign="top">218 (49.2)</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">0.308</td>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">TC</td>
<td align="center" valign="top">227 (40.5)</td>
<td align="center" valign="top">179 (40.4)</td>
<td align="center" valign="top">0.98 (0.73&#x2013;1.30)</td>
<td align="center" valign="top">0.877</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">CC</td>
<td align="center" valign="top">53 (9.5)</td>
<td align="center" valign="top">46 (10.4)</td>
<td align="center" valign="top">1.15 (0.72&#x2013;1.83)</td>
<td align="center" valign="top">0.569</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">TC&#x002B;TT</td>
<td align="center" valign="top">507 (90.5)</td>
<td align="center" valign="top">397 (89.6)</td>
<td align="center" valign="top">0.86 (0.55&#x2013;1.36)</td>
<td align="center" valign="top">0.524</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">rs2287616</td>
<td align="left" valign="top">Synonymous</td>
<td align="left" valign="top">TT</td>
<td align="center" valign="top">277 (49.4)</td>
<td align="center" valign="top">210 (47.4)</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">0.545</td>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">TC</td>
<td align="center" valign="top">225 (40.2)</td>
<td align="center" valign="top">186 (42.0)</td>
<td align="center" valign="top">1.06 (0.79&#x2013;1.41)</td>
<td align="center" valign="top">0.694</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">CC</td>
<td align="center" valign="top">58 (10.4)</td>
<td align="center" valign="top">47 (10.6)</td>
<td align="center" valign="top">1.08 (0.69&#x2013;1.72)</td>
<td align="center" valign="top">0.715</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">TC&#x002B;TT</td>
<td align="center" valign="top">502 (89.6)</td>
<td align="center" valign="top">396 (89.4)</td>
<td align="center" valign="top">0.94 (0.61&#x2013;1.46)</td>
<td align="center" valign="top">0.793</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">rs2287617</td>
<td align="left" valign="top">R299k</td>
<td align="left" valign="top">GG</td>
<td align="center" valign="top">555 (99.1)</td>
<td align="center" valign="top">440 (99.3)</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">0.943</td>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">GA</td>
<td align="center" valign="top">5 (0.9)</td>
<td align="center" valign="top">3 (0.7)</td>
<td align="center" valign="top">0.65 (0.14&#x2013;3.06)</td>
<td align="center" valign="top">0.582</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">AA</td>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">NA</td>
<td align="center" valign="top">NA</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">GA&#x002B;AA</td>
<td align="center" valign="top">5 (0.9)</td>
<td align="center" valign="top">3 (0.7)</td>
<td align="center" valign="top">0.65 (0.14&#x2013;3.06)</td>
<td align="center" valign="top">0.582</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">rs2287622</td>
<td align="left" valign="top">V444A</td>
<td align="left" valign="top">TT</td>
<td align="center" valign="top">50 (8.9)</td>
<td align="center" valign="top">39 (8.8)</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">0.886</td>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">TC</td>
<td align="center" valign="top">237 (42.3)</td>
<td align="center" valign="top">187 (42.2)</td>
<td align="center" valign="top">0.91 (0.55&#x2013;1.51)</td>
<td align="center" valign="top">0.709</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">CC</td>
<td align="center" valign="top">273 (48.8)</td>
<td align="center" valign="top">217 (49.0)</td>
<td align="center" valign="top">0.92 (0.56&#x2013;1.52)</td>
<td align="center" valign="top">0.750</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">TC&#x002B;TT</td>
<td align="center" valign="top">287 (51.2)</td>
<td align="center" valign="top">226 (51.0)</td>
<td align="center" valign="top">1.00 (0.76&#x2013;1.31)</td>
<td align="center" valign="top">0.992</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">rs118109635</td>
<td align="left" valign="top">A865V</td>
<td align="left" valign="top">CC</td>
<td align="center" valign="top">551 (98.4)</td>
<td align="center" valign="top">423 (95.5)</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">0.627</td>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">CT</td>
<td align="center" valign="top">9 (1.6)</td>
<td align="center" valign="top">20 (4.5)</td>
<td align="center" valign="top">2.67 (1.13&#x2013;6.31)</td>
<td align="center" valign="top">0.025</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">TT</td>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">0 (0.0)</td>
<td align="center" valign="top">NA</td>
<td align="center" valign="top">NA</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">CT&#x002B;TT</td>
<td align="center" valign="top">9 (1.6)</td>
<td align="center" valign="top">20 (4.5)</td>
<td align="center" valign="top">2.67 (1.13&#x2013;6.31)</td>
<td align="center" valign="top">0.025</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">rs497692</td>
<td align="left" valign="top">Synonymous</td>
<td align="left" valign="top">AA</td>
<td align="center" valign="top">106 (18.9)</td>
<td align="center" valign="top">55 (12.4)</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">Ref.</td>
<td align="center" valign="top">0.549</td>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">AG</td>
<td align="center" valign="top">249 (44.5)</td>
<td align="center" valign="top">194 (43.8)</td>
<td align="center" valign="top">1.44 (0.96&#x2013;2.17)</td>
<td align="center" valign="top">0.079</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">GG</td>
<td align="center" valign="top">205 (36.6)</td>
<td align="center" valign="top">194 (43.8)</td>
<td align="center" valign="top">1.79 (1.18&#x2013;2.70)</td>
<td align="center" valign="top">0.006</td>
<td/>
</tr>
<tr>
<td/>
<td/>
<td align="left" valign="top">AG&#x002B;GG</td>
<td align="center" valign="top">454 (81.1)</td>
<td align="center" valign="top">388 (87.6)</td>
<td align="center" valign="top">1.60 (1.08&#x2013;2.34)</td>
<td align="center" valign="top">0.017</td>
<td/>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="tfn3-mmr-19-01-0195"><p>CI, confidence interval; HWE, HardyWeinberg Equilibrium; NA, not available; OR, odds ratio; PIS, primary intrahepatic stones; Ref., reference.</p></fn>
</table-wrap-foot>
</table-wrap>
</floats-group>
</article>