<?xml version="1.0" encoding="utf-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "journalpublishing3.dtd">
<article xml:lang="en" article-type="research-article" xmlns:xlink="http://www.w3.org/1999/xlink">
<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">OR</journal-id>
<journal-title-group>
<journal-title>Oncology Reports</journal-title></journal-title-group>
<issn pub-type="ppub">1021-335X</issn>
<issn pub-type="epub">1791-2431</issn>
<publisher>
<publisher-name>D.A. Spandidos</publisher-name></publisher></journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3892/or.2013.2459</article-id>
<article-id pub-id-type="publisher-id">or-30-01-0185</article-id>
<article-categories>
<subj-group>
<subject>Articles</subject></subj-group></article-categories>
<title-group>
<article-title>Epigenetic silencing of Bcl-2, CEBPA and p14<sup>ARF</sup> by the AML1-ETO oncoprotein contributing to growth arrest and differentiation block in the U937 cell line</article-title></title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>ZHUANG</surname><given-names>WEN-YUE</given-names></name><xref rid="af1-or-30-01-0185" ref-type="aff">1</xref><xref rid="af2-or-30-01-0185" ref-type="aff">2</xref></contrib>
<contrib contrib-type="author">
<name><surname>CEN</surname><given-names>JIAN-NONG</given-names></name><xref rid="af1-or-30-01-0185" ref-type="aff">1</xref></contrib>
<contrib contrib-type="author">
<name><surname>ZHAO</surname><given-names>YUN</given-names></name><xref rid="af3-or-30-01-0185" ref-type="aff">3</xref></contrib>
<contrib contrib-type="author">
<name><surname>CHEN</surname><given-names>ZI-XING</given-names></name><xref rid="af1-or-30-01-0185" ref-type="aff">1</xref><xref rid="af3-or-30-01-0185" ref-type="aff">3</xref><xref ref-type="corresp" rid="c1-or-30-01-0185"/></contrib></contrib-group>
<aff id="af1-or-30-01-0185">
<label>1</label>The First Affiliated Hospital, Soochow University, Jiangsu Institute of Hematology, Key Laboratory of Thrombosis and Hemostasis, Ministry of Health, Suzhou, Jiangsu, P.R. China</aff>
<aff id="af2-or-30-01-0185">
<label>2</label>Ecsomatics School in Medical College, Beihua University, Jilin, P.R. China</aff>
<aff id="af3-or-30-01-0185">
<label>3</label>Cyrus Tang Hematology Center, Medical College, Soochow University, Suzhou, Jiangsu, P.R. China</aff>
<author-notes>
<corresp id="c1-or-30-01-0185">Correspondence to: Dr Zi-Xing Chen, The First Affiliated Hospital, Soochow University, 188 Shizi Street, Suzhou, Jiangsu 215006, P.R. China, E-mail: <email>szchenzx@263.net</email></corresp></author-notes>
<pub-date pub-type="ppub">
<month>7</month>
<year>2013</year></pub-date>
<pub-date pub-type="epub">
<day>14</day>
<month>05</month>
<year>2013</year></pub-date>
<volume>30</volume>
<issue>1</issue>
<fpage>185</fpage>
<lpage>192</lpage>
<history>
<date date-type="received">
<day>31</day>
<month>01</month>
<year>2013</year></date>
<date date-type="accepted">
<day>05</day>
<month>04</month>
<year>2013</year></date></history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2013, Spandidos Publications</copyright-statement>
<copyright-year>2013</copyright-year>
<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/3.0">
<license-p>This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited.</license-p></license></permissions>
<abstract>
<p>The AML1-ETO fusion transcription factor generated by the t(8;21) translocation is considered to deregulate the expression of genes that are crucial for normal differentiation and proliferation of hematopoietic progenitors, resulting in acute myelogenous leukemia by recruiting co-repressor complexes to DNA. To investigate the role of AML1-ETO in leukemogenesis, we transfected the cloned AML1-ETO cDNA and expressed the AML1-ETO protein in U937 myelomonocytic leukemia cells. By focusing on the anti-apoptotic gene Bcl-2, the key regulator gene of granulocytic differentiation CCAAT/enhancer-binding protein &#x003B1; (CEBPA) and the tumor suppressor gene p14<sup>ARF</sup>, we found that both AML1-ETO-expressing cell lines and t(8;21) leukemia samples displayed low levels of these three genes. Chromatin immunoprecipitation assays demonstrated that Bcl-2, CEBPA and p14<sup>ARF</sup> were direct transcriptional targets of AML1-ETO. The universal binding of AML1-ETO to genomic DNA resulted in recruitment of methyl-CpG binding protein 2 (MeCP2), reduction of histone H3 or H4 acetylation and increased trimethylation of histone H3 lysine 9 as well as lysine 27 indicating that AML1-ETO induced heterochromatic silencing of Bcl-2, CEBPA and p14<sup>ARF</sup>. These results suggested that the aberrant transcription factor AML1-ETO epigenetically silenced the function of the Bcl-2, CEBPA and p14<sup>ARF</sup> genes by inducing repressed chromatin configurations at their promoters through histone modifications.</p></abstract>
<kwd-group>
<kwd>AML1-ETO fusion gene</kwd>
<kwd>epigenetic alteration</kwd>
<kwd>Bcl-2</kwd>
<kwd>CCAAT/enhancer-binding protein &#x003B1;</kwd>
<kwd>p14<sup>ARF</sup></kwd></kwd-group></article-meta></front>
<body>
<sec sec-type="intro">
<title>Introduction</title>
<p>The t(8;21) is the second most common chromosomal abnormality in AML, accounting for 10&#x02013;15&#x00025; of cases with discernible translocations, and characteristically induces a leukemia with the French-American-British (FAB) M2 phenotype. As previously documented (<xref rid="b1-or-30-01-0185" ref-type="bibr">1</xref>&#x02013;<xref rid="b3-or-30-01-0185" ref-type="bibr">3</xref>), AML1-ETO exerts the dominant negative effect on AML1-dependent transcriptional activation, mostly through interaction of its ETO moiety with nuclear co-repressors N-CoR and Sin3A that recruit the histone deacetylases (HDACs), resulting in transcriptional repression by deacetylating histones and creating repressive chromatic structures. A simple model of AML1-ETO function in leukemogenesis reflects its dominant negative effects on AML1 target genes, to a large extent via the aberrant recruitment of epigenetic modifiers such as HDACs and DNA methyltransferases (DNMTs).</p>
<p>A direct transcriptional regulation by AML1-ETO through the AML1 DNA-binding activity has been demonstrated for a few genes, notably the anti-apoptotic gene Bcl-2 (<xref rid="b4-or-30-01-0185" ref-type="bibr">4</xref>), the hematopoietic lineage regulator gene CCAAT/enhancer-binding protein &#x003B1; (CEBPA) (<xref rid="b5-or-30-01-0185" ref-type="bibr">5</xref>) and the cell cycle regulator p14<sup>ARF</sup>(<xref rid="b6-or-30-01-0185" ref-type="bibr">6</xref>).</p>
<p>The Bcl-2 gene is a highly conserved member of the Bcl-2 family and constitutes an important regulator of apoptosis. Bcl-2 can prevent or delay apoptosis in several cell types (<xref rid="b7-or-30-01-0185" ref-type="bibr">7</xref>). Klampfer <italic>et al</italic>(<xref rid="b4-or-30-01-0185" ref-type="bibr">4</xref>) identified a consensus DNA binding sequence for AML1 (TGT/cGGT) in the 5&#x02032; regulatory region of the Bcl-2 gene and demonstrated that both AML1 and AML1-ETO proteins can bind to this site. Regulation of the Bcl-2 promoter by AML1-ETO, but not by the normal AML1 proteins, indicates a unique biological activity of the fusion protein (<xref rid="b4-or-30-01-0185" ref-type="bibr">4</xref>).</p>
<p>The C/EBP genes are believed to be critically involved in hematopoietic differentiation and leukemogenesis (<xref rid="b8-or-30-01-0185" ref-type="bibr">8</xref>). Approximately 10&#x02013;15&#x00025; of AML samples have inactivating mutations of CEBPA, and the forced expression of C/EBP&#x003B1; in AML cells can induce terminal differentiation, emphasizing the important contribution of C/EBP&#x003B1; to AML leukemogenesis (<xref rid="b5-or-30-01-0185" ref-type="bibr">5</xref>,<xref rid="b9-or-30-01-0185" ref-type="bibr">9</xref>). AML1-ETO may contribute to leukemogenesis by specifically inhibiting AML1 and CEBPA-dependent activation of myeloid promoters and blocking differentiation (<xref rid="b10-or-30-01-0185" ref-type="bibr">10</xref>).</p>
<p>The p53 tumor suppressor pathway is arguably the most important checkpoint control pathway in human cancer. A third component of the p53 pathway is the p14<sup>ARF</sup> tumor suppressor, which regulates the p53-dependent oncogene checkpoint (<xref rid="b11-or-30-01-0185" ref-type="bibr">11</xref>). Loss of p14<sup>ARF</sup> impairs p53-mediated growth arrest and/or apoptosis in response to activated oncogenes. In addition, cells lacking either p53 or p14<sup>ARF</sup> fail to undergo replicative crisis and are immortal (<xref rid="b12-or-30-01-0185" ref-type="bibr">12</xref>). The p53 promoter does not contain any perfect AML1 DNA-binding sites (TGT/cGGT), but the human p14<sup>ARF</sup> promoter contains eight such sites (<xref rid="b6-or-30-01-0185" ref-type="bibr">6</xref>).</p>
<p>In this study, using AML1-ETO-expressing cell line U937-A/E as an <italic>in vitro</italic> model, we performed chromatin immunoprecipitation (ChIP) assays to investigate how the binding of AML1-ETO affected the chromatin structure of its target genes (Bcl-2, CEBPA and p14<sup>ARF</sup>) and thus caused deregulated gene expression associated with growth arrest and differentiation block. Our study identified Bcl-2, CEBPA and p14<sup>ARF</sup> as additional pathogenic targets for a leukemia fusion protein and provided evidence that linked the epigenetic silencing of Bcl-2, CEBPA and p14<sup>ARF</sup> loci to the growth arrest and differentiation block of myeloid precursors. Thus, suppression of these gene expressions correlated with significant alterations in the chromatin structure at the promoters may play a key role in the proliferation and differentiation underlying leukemogenesis.</p></sec>
<sec sec-type="methods">
<title>Materials and methods</title>
<sec>
<title>Clinical samples</title>
<p>Leukemic cells of nine non-t(8;21) AML patients and nine t(8;21) AML patients who were diagnosed as the M2 subtype according to the FAB classification, were prepared from bone marrow cells or peripheral blood mononuclear cells, following approval by the Hospital Ethics Committee with signed consent provided by the patients.</p></sec>
<sec>
<title>Cell culture</title>
<p>Human myeloid U937 cells were maintained in RPMI-1640 medium supplemented with 10&#x00025; fetal bovine serum (FBS) at 37&#x000B0;C in a humidified incubator with an atmosphere of 5&#x00025; CO<sub>2</sub>. U937-Mock and U937-A/E cells were maintained in RPMI-1640 medium supplemented with 10&#x00025; FBS and 0.5 mg of G418/ml.</p></sec>
<sec>
<title>ChIP assay</title>
<p>ChIP assays were performed by using a ChIP Express kit (Millipore Biotechnology), according to the manufacturer&#x02019;s instructions.</p></sec>
<sec>
<title>Statistical analysis</title>
<p>All values in the figures are expressed as the means &#x000B1; SD. To determine statistical significance, the values were compared using two-group t-tests, and P-values &lt;0.05 were considered to indicate statistically significant differences.</p></sec></sec>
<sec sec-type="results">
<title>Results</title>
<sec>
<title>Expression of AML1-ETO reduces proliferation, induces apoptosis and blocks myeloid differentiation</title>
<p>To investigate the potential direct role of AML1-ETO in the growth, survival, and differentiation of myeloid leukemic cells, we made AML1-ETO-expressing U937 cell lines. As indicated in <xref rid="f1-or-30-01-0185" ref-type="fig">Fig. 1A and B</xref>, relatively high levels of AML1-ETO expression were clearly observed in U937-A/E1 and 2 at both mRNA and protein levels. The effects of AML1-ETO expression on cell growth were evaluated by comparing the growth curves of U937-A/E, U937-Mock and U937-WT cells. Analyses of the proliferative ability indicated that cell growth in AML1-ETO-transfected cells was significantly decreased in comparison to empty vector-transfected cells and non-transfected cells (P&lt;0.01) (<xref rid="f1-or-30-01-0185" ref-type="fig">Fig. 1C</xref>). There was no significant difference between the proliferation rates of U937-Mock and U937-WT cells, indicating that the effect was due solely to the expression of AML1-ETO.</p>
<p>We performed experiments to determine how the expression of AML1-ETO affected the apoptosis. The results demonstrated that in U937-A/E cells but not in U937-WT and U937-Mock cells, apoptotic cells were statistically significantly increased, although to a lower degree, as evidenced by the Annexin V assay (<xref rid="f1-or-30-01-0185" ref-type="fig">Fig. 1D</xref>). In order to further confirm the effects of AML1-ETO expression on enhancing apoptosis, changes in caspase-3 protein were analyzed in U937-A/E cells. As shown in <xref rid="f1-or-30-01-0185" ref-type="fig">Fig. 1E</xref>, AML1-ETO expression also significantly enhanced activation of caspase-3, an indicator of cell apoptosis, as indicated by the appearance of active fragment 17 kDa of cleaved caspase-3 on the blot.</p>
<p>Then, we examined whether the expression of AML1-ETO fusion protein had an influence on the differentiation capacity of U937 cells. As markers for myeloid differentiation, the expression of CD11b and CD14 was monitored via FACS analysis. CD11b &#x0002B; cell &#x00025; was 4.1&#x02013;7.0&#x00025; in U937-A/E1&#x02013;4 cells, which was significantly lower than that in U937-Mock cells (11.4&#x00025;) and U937-WT cells (11.0&#x00025;) (P&lt;0.01) (<xref rid="f1-or-30-01-0185" ref-type="fig">Fig. 1F</xref>). Moreover, the expression of CD14 antigen was decreased by 1.5&#x02013;2-fold as compared with the control cells (P&lt;0.01) (<xref rid="f1-or-30-01-0185" ref-type="fig">Fig. 1F</xref>). These data correspond to the lower differentiation morphological changes of AML1-ETO-transfected cells such as expanded cell size and increased nuclei/cytoplasm ratio with larger nuclei observed in the morphological examination of Wright-Giemsa-stained cytospins (<xref rid="f1-or-30-01-0185" ref-type="fig">Fig. 1G</xref>).</p>
<p>Therefore, it appears that AML1-ETO expression induces growth arrest in leukemic U937 transformants, as demonstrated by the reduced growth rate. Furthermore, the expression of AML1-ETO significantly inhibited the differentiation of U937-A/E cells. These cells lost their original lymphoblast-like morphology without displaying granulocytic morphology and exhibited a block of differentiation at an early stage, as previously reported (<xref rid="b16-or-30-01-0185" ref-type="bibr">16</xref>).</p></sec>
<sec>
<title>Bcl-2, CEBPA and p14<sup>ARF</sup> expression are downregulated by the AML1-ETO fusion protein</title>
<p>A quantitative reverse transcription PCR (qRT-PCR) assay was used to assess the mRNA expression of Bcl-2, CEBPA, p14<sup>ARF</sup> and GAPDH. This assay was tested on U937 AML1-ETO-expressing cells and U937 non-expressing cells. We observed that AML1-ETO-expressing cells contained markedly reduced levels of Bcl-2, CEBPA and p14<sup>ARF</sup> as compared with control-transfected cells or wild-type cells (P&lt;0.001) (<xref rid="f2-or-30-01-0185" ref-type="fig">Fig. 2A&#x02013;C</xref>).</p>
<p>The same assay was applied to assess Bcl-2, CEBPA and p14<sup>ARF</sup> mRNA levels in primary leukemia cells of AML patients with or without t(8;21). Two cell lines derived from t(8;21) leukemia patient cells showed higher expression of Bcl-2 (<xref rid="b4-or-30-01-0185" ref-type="bibr">4</xref>,<xref rid="b13-or-30-01-0185" ref-type="bibr">13</xref>). However, studies using 29 (<xref rid="b14-or-30-01-0185" ref-type="bibr">14</xref>) and 17 (<xref rid="b15-or-30-01-0185" ref-type="bibr">15</xref>) primary t(8;21) leukemia patient samples indicated that Bcl-2 expression was generally downregulated compared to that for non-leukemic or non-t(8;21) AML samples. We also confirmed a reduced Bcl-2 mRNA level in patients with t(8;21)-containing AML (P&lt;0.001) (<xref rid="f2-or-30-01-0185" ref-type="fig">Fig. 2D</xref>), consistent with a previous report (<xref rid="b16-or-30-01-0185" ref-type="bibr">16</xref>).</p>
<p>This was also the case with sorted cells from patients suffering from a leukemia with or without a t(8;21), indicating that the presence of AML1-ETO led to a significant downregulation of CEBPA expression (P&lt;0.001) (<xref rid="f2-or-30-01-0185" ref-type="fig">Fig. 2E</xref>).</p>
<p>The p14<sup>ARF</sup> locus is rarely deleted in AML (<xref rid="b17-or-30-01-0185" ref-type="bibr">17</xref>). Whereas p14<sup>ARF</sup> mRNA levels are low in normal peripheral blood cells and bone marrow, the levels of p14<sup>ARF</sup> were increased in most AML samples studied, suggesting that this checkpoint was activated (<xref rid="b18-or-30-01-0185" ref-type="bibr">18</xref>). We tested whether AML1-ETO prevents the increase of p14<sup>ARF</sup> in patients with t(8;21)-containing AML. Analysis of p14<sup>ARF</sup> mRNA levels in 18 AML samples indicated that p14<sup>ARF</sup> mRNA levels were lower in t(8;21)-containing AML samples. The p14<sup>ARF</sup> expression values were normalized to &#x003B2;-actin expression. The t(8;21)-negative samples expressed a range of p14<sup>ARF</sup>, with a mean ratio of p14<sup>ARF</sup>: &#x003B2;-actin of 1.0. By contrast, the t(8;21)-containing samples on average expressed markedly reduced levels of p14<sup>ARF</sup> (P&lt;0.001) with a mean p14<sup>ARF</sup>: &#x003B2;-actin ratio of only 0.07 (<xref rid="f2-or-30-01-0185" ref-type="fig">Fig. 2F</xref>).</p>
<p>We therefore concluded that the expressions of Bcl-2, CEBPA and p14<sup>ARF</sup> mRNA are specifically inhibited in leukemia cells that have the AML1-ETO fusion gene. These results are similar to previous findings (<xref rid="b5-or-30-01-0185" ref-type="bibr">5</xref>,<xref rid="b16-or-30-01-0185" ref-type="bibr">16</xref>,<xref rid="b19-or-30-01-0185" ref-type="bibr">19</xref>,<xref rid="b20-or-30-01-0185" ref-type="bibr">20</xref>), validating the quantitative accuracy of the RT-PCR assay.</p></sec>
<sec>
<title>AML1-ETO triggers the heterochromatic silencing of Bcl-2, CEBPA and p14<sup>ARF</sup> promoter regions</title>
<p>AML1-ETO maintains the ability of AML1 to bind the consensus sequence TGT/cGGT on target gene promoters and acts as a dominant-negative repressor of AML1 targeting genes, including Bcl-2, CEBPA and p14<sup>ARF</sup>(<xref rid="b5-or-30-01-0185" ref-type="bibr">5</xref>,<xref rid="b16-or-30-01-0185" ref-type="bibr">16</xref>,<xref rid="b19-or-30-01-0185" ref-type="bibr">19</xref>,<xref rid="b20-or-30-01-0185" ref-type="bibr">20</xref>). ChIP using primers that encompassed the Bcl-2, CEBPA and p14<sup>ARF</sup> promoter regions was performed with anti-ETO antibody to verify these AML1-ETO targets enriched within the AML1-ETO bound genomic sequences in U937-AML1-ETO cells and as a negative control in U937-empty vector. All comparisons in the cell lines were made between AML1-ETO-expressing and non-expressing cells. DNA sequences specifically precipitated by anti-ETO antibody in AML1-ETO-expressing cells (but not in AML1-ETO-negative cells) most likely represent the AML1-ETO-specific targets. We detected the Bcl-2, CEBPA and p14<sup>ARF</sup> promoter sequences in anti-ETO immune complexes, but not in control immune complexes (<xref rid="f3-or-30-01-0185" ref-type="fig">Fig. 3A</xref>), indicating that Bcl-2, CEBPA and p14<sup>ARF</sup> are direct and specific targets of the t(8;21) fusion protein.</p>
<p>The oncogenic properties of AML1-ETO are linked to its ability to form oligomeric complexes with increased affinity for HDAC and DNMTs rendering AML1-ETO a potent transcriptional repressor of AML1-target genes (<xref rid="b21-or-30-01-0185" ref-type="bibr">21</xref>). ChIP analysis also revealed the presence of methyl-CpG binding protein 2 (MeCP2) at the Bcl-2, CEBPA and p14<sup>ARF</sup> promoter regions occupied by AML1-ETO in U937-A/E1&#x02013;4 (P&lt;0.001) (<xref rid="f3-or-30-01-0185" ref-type="fig">Fig. 3B</xref>). We therefore investigated whether the aberrant recruitment of MeCP2 activities by AML1-ETO modifies nucleosomal histone tails on the Bcl-2, CEBPA and p14<sup>ARF</sup> promoters. Using ChIP analysis, we focused on several modifications of histone H3 (AcH3, tri-mK27 and tri-mK9) and the acetylated forms of histone H4 in the same cell lines that were used for AML1-ETO target identification. These modifications are mutually exclusive, whereby H3-K9 trimethylation or H3-K27 trimethylation is a hallmark of inactive chromatin and acetylation of H3 or H4 is found at active loci (<xref rid="b22-or-30-01-0185" ref-type="bibr">22</xref>,<xref rid="b23-or-30-01-0185" ref-type="bibr">23</xref>). As illustrated in <xref rid="f3-or-30-01-0185" ref-type="fig">Fig. 3C and D</xref>, H3 and H4 histones are hyperacetylated at the Bcl-2, CEBPA and p14<sup>ARF</sup> promoter regions in U937-Mock and U937-WT cells, while decreased acetylation levels are measurable in U937-A/E1&#x02013;4 cells (P&lt;0.001). The reduced histone acetylation in AML1-ETO-expressing cells suggested a hindered transcription at these chromatin sites on the Bcl-2, CEBPA and p14<sup>ARF</sup> genes. ChIP assay performed using antibodies against H3-K9 trimethylation and H3-K27 trimethylation demonstrated that AML1-ETO-expressing cells had a marked trimethylation level of H3-K9 and H3-K27 at the Bcl-2, CEBPA and p14<sup>ARF</sup> promoters. By contrast, few or no promoters with trimethylation of H3-K9 and H3-K27 were observed in AML1-ETO-non-expressing cells (P&lt;0.001) (<xref rid="f3-or-30-01-0185" ref-type="fig">Fig. 3E and F</xref>). The higher level of histone methylation in AML1-ETO-expressing cells paralleled with significantly lower levels of H3 and H4 acetylation. These changes are consistent with the induction of a repressive chromatin configuration by AML1-ETO in its direct target genes.</p></sec>
<sec>
<title>Treatment of demethylating agent or HDAC inhibitor partially reverses Bcl-2, CEBPA and p14<sup>ARF</sup> suppression</title>
<p>We next treated the AML1-ETO-positive and -negative U937 cells with either the DNMT inhibitor 5-Aza or the HDAC inhibitor TB, respectively. Both 5-Aza and TB increased the expression of Bcl-2, CEBPA and p14<sup>ARF</sup> by ~2- to 3-fold (P&lt;0.001) (<xref rid="f4-or-30-01-0185" ref-type="fig">Fig. 4A&#x02013;C</xref>). In addition, 5-Aza impaired the ability of anti-MeCP2 antibody to immunoprecipitate naked DNA surrounding the region of AML1 binding sites on Bcl-2, CEBPA and p14<sup>ARF</sup> gene promoters (P&lt;0.001) (<xref rid="f4-or-30-01-0185" ref-type="fig">Fig. 4D</xref>). On the other hand, a significant increase (P&lt;0.001) in chromatin H3 and H4 acetylation of Bcl-2, CEBPA and p14<sup>ARF</sup> was observed in cells treated with TB compared with untreated cells (<xref rid="f4-or-30-01-0185" ref-type="fig">Fig. 4E and F</xref>).</p>
<p>Consistent with the increased Bcl-2, CEBPA and p14<sup>ARF</sup> mRNA levels, 5-Aza treatment showed demethylation of CpGs and TB treatment resulted in enhanced accumulation of acetylated histone H3 or H4 at the Bcl-2, CEBPA and p14<sup>ARF</sup> promoters. These results indicated that DNA methylation and HDAC were simultaneously and independently operative in this model, and both contributed to gene regulation in U937 cells.</p></sec></sec>
<sec sec-type="discussion">
<title>Discussion</title>
<p>Cancer is a genetic and epigenetic disease (<xref rid="b24-or-30-01-0185" ref-type="bibr">24</xref>,<xref rid="b25-or-30-01-0185" ref-type="bibr">25</xref>). The contribution of epigenetic mechanisms for a correct cell function is highlighted by the effects of their deregulation in cooperation with genetic alterations leading to the establishment and progression of tumors. Heterochromatic gene silencing represents an alternative oncogenic mechanism to gene mutation or deletion for the transcriptional repression of tumor suppressor genes (<xref rid="b24-or-30-01-0185" ref-type="bibr">24</xref>).</p>
<p>Reduced expression or loss of function in hematopoietic malignancies has been studied extensively, and loss of C/EBP&#x003B1; function is thought to contribute as an early event to leukemogenesis by inhibiting myeloid differentiation (<xref rid="b9-or-30-01-0185" ref-type="bibr">9</xref>). Hypermethylation in the upstream region of the promoter-associated CpG island of CEBPA has previously been detected in lung cancer as well as in head and neck squamous cell carcinoma (<xref rid="b26-or-30-01-0185" ref-type="bibr">26</xref>,<xref rid="b27-or-30-01-0185" ref-type="bibr">27</xref>). In hematopoietic tumor cell lines, CpG island hypermethylation of the proximal CEBPA promoter region was associated with transcriptional silencing, and treatment with the demethylating agent 5-aza-2&#x02032;-deoxycytidine resulted in C/EBP&#x003B1; reexpression and promoter demethylation (<xref rid="b28-or-30-01-0185" ref-type="bibr">28</xref>). Wouters <italic>et al</italic> provided first evidence for the importance of C/EBP&#x003B1; methylation in a small subgroup of AML (<xref rid="b29-or-30-01-0185" ref-type="bibr">29</xref>). The epigenetic contribution to C/EBP&#x003B1; deregulation has been investigated and the aberrant DNA methylation in the upstream promoter of C/EBP&#x003B1; has been shown to be a frequent event in AML (<xref rid="b28-or-30-01-0185" ref-type="bibr">28</xref>).</p>
<p>Here, we showed that the myeloid transcription factor C/EBP&#x003B1; was specifically downregulated in AML patients with the AML1<italic>-</italic>ETO of the FAB-M2 subtype or U937 AML1-ETO-expressing cells. U937-A/E clones exhibited lower differentiation morphological changes such as expanded cell size and increased nuclei/cytoplasm ratio with larger nuclei associated with a decreased expression of cell surface markers CD11b and CD14. This altered differentiation potential is correlated with the downregulation of C/EBP&#x003B1; upon expression of AML1-ETO. Therefore, the epigenetic dysregulation including MeCP2 binding, H3 and H4 hypoacetylation as well as hypertrimethylation of H3-K9 or K27 may be a common alternative or complementary mechanism of interfering with C/EBP&#x003B1; function.</p>
<p>It has previously been reported that the AML1-ETO fusion protein was able to induce anti-apoptotic Bcl-2 expression <italic>in vitro</italic>(<xref rid="b4-or-30-01-0185" ref-type="bibr">4</xref>), while Burel <italic>et al</italic>(<xref rid="b16-or-30-01-0185" ref-type="bibr">16</xref>) and Lu <italic>et al</italic>(<xref rid="b20-or-30-01-0185" ref-type="bibr">20</xref>) as well as the present study showed an AML1-ETO-induced decrease in Bcl-2 expression. On the contrary, AML1-ETO increased the expression of Bak protein, a pro-apoptotic member of the Bcl-2 family that plays an important role in regulating mitochondrial membrane permeability during apoptosis (<xref rid="b30-or-30-01-0185" ref-type="bibr">30</xref>). The induction of AML1-ETO in U937T-A/E cells causes a progressive cell cycle arrest in G0/G1 phase. Moreover, ectopic expression of Bcl-2 delays apoptosis without preventing AML1-ETO-induced G1/G0 arrest (<xref rid="b16-or-30-01-0185" ref-type="bibr">16</xref>). Our results are in agreement with this and showed that AML1-ETO could markedly downregulate the expression of Bcl-2 by inducing repressive chromatin structure at its promoter. It has been suggested that the overexpression of the anti-apoptotic protein Bcl-2 in chronic lymphocytic leukemia (CLL) is caused by hypomethylation of the promoter region of the Bcl-2 gene (<xref rid="b31-or-30-01-0185" ref-type="bibr">31</xref>). However, methylation of the 5&#x02032; region of apoptosis-associated genes is a common finding in patients with bladder carcinoma (<xref rid="b32-or-30-01-0185" ref-type="bibr">32</xref>). This finding is noteworthy as DNA hypermethylation is often associated with decreased gene expression, and in the case of Bcl-2, this would be expected to promote apoptosis rather than tumor growth. Inhibition of proliferation or apoptosis would not be favorable to the propagation of clonal cells harboring the t(8;21) translocation. If growth arrest and apoptosis are general features associated with the expression of AML1-ETO, we hypothesize that AML1-ETO-modulated apoptosis-regulating genes and/or proteins may become the targets for secondary &#x02018;hit&#x02019; that contributes to the pathogenesis of AML1-ETO-associated leukemia. It may be inferred that some genetic or/and epigenetic alterations of apoptosis-related genes have appeared in these AML1-ETO-positive AML cells, which may overcome the apoptosis-enhancing effect of AML1-ETO.</p>
<p>Methylation at the p14<sup>ARF</sup> promoter to suppress gene expression has been observed in some tumor cell lines, particularly in colorectal cancer (<xref rid="b33-or-30-01-0185" ref-type="bibr">33</xref>,<xref rid="b34-or-30-01-0185" ref-type="bibr">34</xref>). In our study, we found that the recruitment of MeCP2 to p14<sup>ARF</sup> chromatin in AML1-ETO-expressing cell lines correlates with lower levels of H3 and H4 acetylation and higher levels of H3 (Lys9 and Lys27) trimethylation resulting in the silence of the p14<sup>ARF</sup> gene. AML1-ETO suppressed the p14<sup>ARF</sup> promoter and reduced endogenous levels of p14<sup>ARF</sup> expression in multiple cell types (<xref rid="b6-or-30-01-0185" ref-type="bibr">6</xref>). Our results support this and provide an explanation for the observed reduced p14<sup>ARF</sup> expression. Thus, AML1-ETO-mediated suppression of p14<sup>ARF</sup> may disrupt both p53-dependent and p53-independent growth suppression pathways to extend the lifespan of myeloid progenitor cells, allowing more opportunities to acquire additional mutations, ultimately leading to leukemia.</p>
<p>Epigenetic alterations are increasingly recognized as important contributors to human cancer pathogenesis and DNMT and HDAC inhibitors have recently been incorporated into the treatment of AML1-ETO leukemias (<xref rid="b35-or-30-01-0185" ref-type="bibr">35</xref>&#x02013;<xref rid="b37-or-30-01-0185" ref-type="bibr">37</xref>). Their ability to reverse the inhibition of myeloid-specific genes helps to re-establish a normal differentiation program. Our findings indicate that demethylating agents or HDAC inhibitors can relieve Bcl-2, CEBPA and p14<sup>ARF</sup> suppression in AML1-ETO-expressing cells through a mechanism that involves inversion of epigenetic alterations.</p>
<p>Despite the changes in expression pattern of Bcl-2, CEBPA and p14<sup>ARF</sup> in primary bone marrow cells of AML1-ETO-positive AML-M2 patients were similar to those in U937-A/E cells when compared to the AML1-ETO-negative cells, to date we have not found the significant and consistent alterations of DNA/histone modifications at these genes in primary cells of AML1-ETO-positive AML patients (data not shown). This may be due to the heterogeneity of the primary marrow cells of the patients and the limitation of techniques. However, one would expect to apply epigenetic markers for diagnosis, stratification and especially as an indicator in epigenetic regulatory treatment in leukemia patients in the future.</p>
<p>Collectively, we provided the first evidence for modifications of the chromatin structure at the Bcl-2, CEBPA and p14<sup>ARF</sup> promoters occupied by the AML1-ETO fusion protein. Our data are therefore consistent with a model by which the binding of AML1-ETO leads to alterations in the chromatin structure of its target genes. These findings underscore the importance of epigenetic alteration mediated silencing of these genes in leukemogenesis. It is noteworthy to compare the chromatin structure of different AML1-ETO target genes in order to better understand the molecular details of the deregulation of gene expression by this oncoprotein. If so, these mechanisms may be potential targets for therapeutic strategies based on the reversal of epigenetic silencing in t(8;21)-positive leukemias.</p></sec></body>
<back>
<ack>
<title>Acknowledgements</title>
<p>The authors thank Dr Qing-Yu Wu for providing pcDNA3.1/V5-His-TOPO TA vector. This study was supported by grants from the National Natural Scientific Foundation of China (no. 81070402), the National Key Scientific Projects of China (no. 2011CB933501) and the Priority Academic Program Development of Jiangsu Higher Education Institutions (PAPD).</p></ack>
<ref-list>
<title>References</title>
<ref id="b1-or-30-01-0185"><label>1</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Chevallier</surname><given-names>N</given-names></name><name><surname>Corcoran</surname><given-names>CM</given-names></name><name><surname>Lennon</surname><given-names>C</given-names></name><etal/></person-group><article-title>ETO protein of t(8;21) AML is a corepressor for Bcl-6 B-cell lymphoma oncoprotein</article-title><source>Blood</source><volume>103</volume><fpage>1454</fpage><lpage>1463</lpage><year>2004</year></element-citation></ref>
<ref id="b2-or-30-01-0185"><label>2</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Rowley</surname><given-names>JD</given-names></name></person-group><article-title>Molecular genetics in acute leukemia</article-title><source>Leukemia</source><volume>14</volume><fpage>513</fpage><lpage>517</lpage><year>2000</year></element-citation></ref>
<ref id="b3-or-30-01-0185"><label>3</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Maiques-Diaz</surname><given-names>A</given-names></name><name><surname>Chou</surname><given-names>FS</given-names></name><name><surname>Wunderlich</surname><given-names>M</given-names></name><etal/></person-group><article-title>Chromatin modifications induced by the AML1-ETO fusion protein reversibly silence its genomic targets through AML1 and Sp1 binding motifs</article-title><source>Leukemia</source><volume>26</volume><fpage>1329</fpage><lpage>1337</lpage><year>2012</year></element-citation></ref>
<ref id="b4-or-30-01-0185"><label>4</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Klampfer</surname><given-names>L</given-names></name><name><surname>Zhang</surname><given-names>J</given-names></name><name><surname>Zelenetz</surname><given-names>AO</given-names></name><name><surname>Uchida</surname><given-names>H</given-names></name><name><surname>Nimer</surname><given-names>SD</given-names></name></person-group><article-title>The AML1/ETO fusion protein activates transcription of BCL-2</article-title><source>Proc Natl Acad Sci USA</source><volume>93</volume><fpage>14059</fpage><lpage>14064</lpage><year>1996</year></element-citation></ref>
<ref id="b5-or-30-01-0185"><label>5</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Pabst</surname><given-names>T</given-names></name><name><surname>Mueller</surname><given-names>BU</given-names></name><name><surname>Harakawa</surname><given-names>N</given-names></name><etal/></person-group><article-title>AML1-ETO downregulates the granulocytic differentiation factor C/EBPalpha in t(8;21) myeloid leukemia</article-title><source>Nat Med</source><volume>7</volume><fpage>444</fpage><lpage>451</lpage><year>2001</year></element-citation></ref>
<ref id="b6-or-30-01-0185"><label>6</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Linggi</surname><given-names>B</given-names></name><name><surname>Muller-Tidow</surname><given-names>C</given-names></name><name><surname>van de Locht</surname><given-names>L</given-names></name><etal/></person-group><article-title>The t(8;21) fusion protein, AML1 ETO, specifically represses the transcription of the p14(ARF) tumor suppressor in acute myeloid leukemia</article-title><source>Nat Med</source><volume>8</volume><fpage>743</fpage><lpage>750</lpage><year>2002</year></element-citation></ref>
<ref id="b7-or-30-01-0185"><label>7</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kelly</surname><given-names>PN</given-names></name><name><surname>Strasser</surname><given-names>A</given-names></name></person-group><article-title>The role of Bcl-2 and its pro-survival relatives in tumourigenesis and cancer therapy</article-title><source>Cell Death Differ</source><volume>18</volume><fpage>1414</fpage><lpage>1424</lpage><year>2011</year></element-citation></ref>
<ref id="b8-or-30-01-0185"><label>8</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Krug</surname><given-names>U</given-names></name><name><surname>Ganser</surname><given-names>A</given-names></name><name><surname>Koeffler</surname><given-names>HP</given-names></name></person-group><article-title>Tumor suppressor genes in normal and malignant hematopoiesis</article-title><source>Oncogene</source><volume>21</volume><fpage>3475</fpage><lpage>3495</lpage><year>2002</year></element-citation></ref>
<ref id="b9-or-30-01-0185"><label>9</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Ho</surname><given-names>PA</given-names></name><name><surname>Alonzo</surname><given-names>TA</given-names></name><name><surname>Gerbing</surname><given-names>RB</given-names></name><etal/></person-group><article-title>Prevalence and prognostic implications of CEBPA mutations in pediatric acute myeloid leukemia (AML): a report from the Children&#x02019;s Oncology Group</article-title><source>Blood</source><volume>113</volume><fpage>6558</fpage><lpage>6566</lpage><year>2009</year></element-citation></ref>
<ref id="b10-or-30-01-0185"><label>10</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname><given-names>DE</given-names></name><name><surname>Hetherington</surname><given-names>CJ</given-names></name><name><surname>Meyers</surname><given-names>S</given-names></name><etal/></person-group><article-title>CCAAT enhancer-binding protein (C/EBP) and AML1 (CBF alpha2) synergistically activate the macrophage colony-stimulating factor receptor promoter</article-title><source>Mol Cell Biol</source><volume>16</volume><fpage>1231</fpage><lpage>1240</lpage><year>1996</year></element-citation></ref>
<ref id="b11-or-30-01-0185"><label>11</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Sherr</surname><given-names>CJ</given-names></name><name><surname>Weber</surname><given-names>JD</given-names></name></person-group><article-title>The ARF/p53 pathway</article-title><source>Curr Opin Genet Dev</source><volume>10</volume><fpage>94</fpage><lpage>99</lpage><year>2000</year></element-citation></ref>
<ref id="b12-or-30-01-0185"><label>12</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kamijo</surname><given-names>T</given-names></name><name><surname>Zindy</surname><given-names>F</given-names></name><name><surname>Roussel</surname><given-names>MF</given-names></name><etal/></person-group><article-title>Tumor suppression at the mouse INK4a locus mediated by the alternative reading frame product p19ARF</article-title><source>Cell</source><volume>91</volume><fpage>649</fpage><lpage>659</lpage><year>1997</year></element-citation></ref>
<ref id="b13-or-30-01-0185"><label>13</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kohzaki</surname><given-names>H</given-names></name><name><surname>Ito</surname><given-names>K</given-names></name><name><surname>Huang</surname><given-names>G</given-names></name><name><surname>Wee</surname><given-names>HJ</given-names></name><name><surname>Murakami</surname><given-names>Y</given-names></name><name><surname>Ito</surname><given-names>Y</given-names></name></person-group><article-title>Block of granulocytic differentiation of 32Dcl3 cells by AML1/ETO(MTG8) but not by highly expressed Bcl-2</article-title><source>Oncogene</source><volume>18</volume><fpage>4055</fpage><lpage>4062</lpage><year>1999</year></element-citation></ref>
<ref id="b14-or-30-01-0185"><label>14</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Shikami</surname><given-names>M</given-names></name><name><surname>Miwa</surname><given-names>H</given-names></name><name><surname>Nishii</surname><given-names>K</given-names></name><etal/></person-group><article-title>Low BCL-2 expression in acute leukemia with t(8;21) chromosomal abnormality</article-title><source>Leukemia</source><volume>13</volume><fpage>358</fpage><lpage>368</lpage><year>1999</year></element-citation></ref>
<ref id="b15-or-30-01-0185"><label>15</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Banker</surname><given-names>DE</given-names></name><name><surname>Radich</surname><given-names>J</given-names></name><name><surname>Becker</surname><given-names>A</given-names></name><etal/></person-group><article-title>The t(8;21) translocation is not consistently associated with high Bcl-2 expression in de novo acute myeloid leukemias of adults</article-title><source>Clin Cancer Res</source><volume>4</volume><fpage>3051</fpage><lpage>3062</lpage><year>1998</year></element-citation></ref>
<ref id="b16-or-30-01-0185"><label>16</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Burel</surname><given-names>SA</given-names></name><name><surname>Harakawa</surname><given-names>N</given-names></name><name><surname>Zhou</surname><given-names>L</given-names></name><name><surname>Pabst</surname><given-names>T</given-names></name><name><surname>Tenen</surname><given-names>DG</given-names></name><name><surname>Zhang</surname><given-names>DE</given-names></name></person-group><article-title>Dichotomy of AML1-ETO functions: growth arrest versus block of differentiation</article-title><source>Mol Cell Biol</source><volume>21</volume><fpage>5577</fpage><lpage>5590</lpage><year>2001</year></element-citation></ref>
<ref id="b17-or-30-01-0185"><label>17</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Ruas</surname><given-names>M</given-names></name><name><surname>Peters</surname><given-names>G</given-names></name></person-group><article-title>The p16INK4a/CDKN2A tumor suppressor and its relatives</article-title><source>Biochim Biophys Acta</source><volume>1378</volume><fpage>F115</fpage><lpage>F177</lpage><year>1998</year></element-citation></ref>
<ref id="b18-or-30-01-0185"><label>18</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Taniguchi</surname><given-names>T</given-names></name><name><surname>Chikatsu</surname><given-names>N</given-names></name><name><surname>Takahashi</surname><given-names>S</given-names></name><etal/></person-group><article-title>Expression of p16INK4A and p14<sup>ARF</sup> in hematological malignancies</article-title><source>Leukemia</source><volume>13</volume><fpage>1760</fpage><lpage>1769</lpage><year>1999</year></element-citation></ref>
<ref id="b19-or-30-01-0185"><label>19</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hiebert</surname><given-names>SW</given-names></name><name><surname>Reed-Inderbitzin</surname><given-names>EF</given-names></name><name><surname>Amann</surname><given-names>J</given-names></name><name><surname>Irvin</surname><given-names>B</given-names></name><name><surname>Durst</surname><given-names>K</given-names></name><name><surname>Linggi</surname><given-names>B</given-names></name></person-group><article-title>The t(8;21) fusion protein contacts co-repressors and histone deacetylases to repress the transcription of the p14<sup>ARF</sup> tumor suppressor</article-title><source>Blood Cells Mol Dis</source><volume>30</volume><fpage>177</fpage><lpage>183</lpage><year>2003</year></element-citation></ref>
<ref id="b20-or-30-01-0185"><label>20</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Lu</surname><given-names>Y</given-names></name><name><surname>Xu</surname><given-names>YB</given-names></name><name><surname>Yuan</surname><given-names>TT</given-names></name><etal/></person-group><article-title>Inducible expression of AML1-ETO fusion protein endows leukemic cells with susceptibility to extrinsic and intrinsic apoptosis</article-title><source>Leukemia</source><volume>20</volume><fpage>987</fpage><lpage>993</lpage><year>2006</year></element-citation></ref>
<ref id="b21-or-30-01-0185"><label>21</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Fazi</surname><given-names>F</given-names></name><name><surname>Zardo</surname><given-names>G</given-names></name><name><surname>Gelmetti</surname><given-names>V</given-names></name><etal/></person-group><article-title>Heterochromatic gene repression of the retinoic acid pathway in acute myeloid leukemia</article-title><source>Blood</source><volume>109</volume><fpage>4432</fpage><lpage>4440</lpage><year>2007</year></element-citation></ref>
<ref id="b22-or-30-01-0185"><label>22</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Eberharter</surname><given-names>A</given-names></name><name><surname>Becker</surname><given-names>PB</given-names></name></person-group><article-title>Histone acetylation: a switch between repressive and permissive chromatin. Second in review series on chromatin dynamics</article-title><source>EMBO Rep</source><volume>3</volume><fpage>224</fpage><lpage>229</lpage><year>2002</year></element-citation></ref>
<ref id="b23-or-30-01-0185"><label>23</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kouzarides</surname><given-names>T</given-names></name></person-group><article-title>Histone methylation in transcriptional control</article-title><source>Curr Opin Genet Dev</source><volume>12</volume><fpage>198</fpage><lpage>209</lpage><year>2002</year></element-citation></ref>
<ref id="b24-or-30-01-0185"><label>24</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Jones</surname><given-names>PA</given-names></name><name><surname>Baylin</surname><given-names>SB</given-names></name></person-group><article-title>The epigenomics of cancer</article-title><source>Cell</source><volume>128</volume><fpage>683</fpage><lpage>692</lpage><year>2007</year></element-citation></ref>
<ref id="b25-or-30-01-0185"><label>25</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Sharma</surname><given-names>S</given-names></name><name><surname>Kelly</surname><given-names>TK</given-names></name><name><surname>Jones</surname><given-names>PA</given-names></name></person-group><article-title>Epigenetics in cancer</article-title><source>Carcinogenesis</source><volume>31</volume><fpage>27</fpage><lpage>36</lpage><year>2010</year></element-citation></ref>
<ref id="b26-or-30-01-0185"><label>26</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Tada</surname><given-names>Y</given-names></name><name><surname>Brena</surname><given-names>RM</given-names></name><name><surname>Hackanson</surname><given-names>B</given-names></name><name><surname>Morrison</surname><given-names>C</given-names></name><name><surname>Otterson</surname><given-names>GA</given-names></name><name><surname>Plass</surname><given-names>C</given-names></name></person-group><article-title>Epigenetic modulation of tumor suppressor CCAAT/enhancer binding protein alpha activity in lung cancer</article-title><source>J Natl Cancer Inst</source><volume>98</volume><fpage>396</fpage><lpage>406</lpage><year>2006</year></element-citation></ref>
<ref id="b27-or-30-01-0185"><label>27</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bennett</surname><given-names>KL</given-names></name><name><surname>Hackanson</surname><given-names>B</given-names></name><name><surname>Smith</surname><given-names>LT</given-names></name><etal/></person-group><article-title>Tumor suppressor activity of CCAAT/enhancer binding protein alpha is epigenetically down-regulated in head and neck squamous cell carcinoma</article-title><source>Cancer Res</source><volume>67</volume><fpage>4657</fpage><lpage>4664</lpage><year>2007</year></element-citation></ref>
<ref id="b28-or-30-01-0185"><label>28</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hackanson</surname><given-names>B</given-names></name><name><surname>Bennett</surname><given-names>KL</given-names></name><name><surname>Brena</surname><given-names>RM</given-names></name><etal/></person-group><article-title>Epigenetic modification of CCAAT/enhancer binding protein alpha expression in acute myeloid leukemia</article-title><source>Cancer Res</source><volume>68</volume><fpage>3142</fpage><lpage>3151</lpage><year>2008</year></element-citation></ref>
<ref id="b29-or-30-01-0185"><label>29</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Wouters</surname><given-names>BJ</given-names></name><name><surname>Jord&#x000E0;</surname><given-names>MA</given-names></name><name><surname>Keeshan</surname><given-names>K</given-names></name><etal/></person-group><article-title>Distinct gene expression profiles of acute myeloid/T-lymphoid leukemia with silenced CEBPA and mutations in NOTCH1</article-title><source>Blood</source><volume>110</volume><fpage>3706</fpage><lpage>3714</lpage><year>2007</year></element-citation></ref>
<ref id="b30-or-30-01-0185"><label>30</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kiefer</surname><given-names>MC</given-names></name><name><surname>Brauer</surname><given-names>MJ</given-names></name><name><surname>Powers</surname><given-names>VC</given-names></name><etal/></person-group><article-title>Modulation of apoptosis by the widely distributed Bcl-2 homologue Bak</article-title><source>Nature</source><volume>374</volume><fpage>736</fpage><lpage>739</lpage><year>1995</year></element-citation></ref>
<ref id="b31-or-30-01-0185"><label>31</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hanada</surname><given-names>M</given-names></name><name><surname>Delia</surname><given-names>D</given-names></name><name><surname>Aiello</surname><given-names>A</given-names></name><name><surname>Stadtmauer</surname><given-names>E</given-names></name><name><surname>Reed</surname><given-names>JC</given-names></name></person-group><article-title>bcl-2 gene hypomethylation and high-level expression in B-cell chronic lymphocytic leukemia</article-title><source>Blood</source><volume>82</volume><fpage>1820</fpage><lpage>1828</lpage><year>1993</year></element-citation></ref>
<ref id="b32-or-30-01-0185"><label>32</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Friedrich</surname><given-names>MG</given-names></name><name><surname>Weisenberger</surname><given-names>DJ</given-names></name><name><surname>Cheng</surname><given-names>JC</given-names></name><etal/></person-group><article-title>Detection of methylated apoptosis-associated genes in urine sediments of bladder cancer patients</article-title><source>Clin Cancer Res</source><volume>10</volume><fpage>7457</fpage><lpage>7465</lpage><year>2004</year></element-citation></ref>
<ref id="b33-or-30-01-0185"><label>33</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Esteller</surname><given-names>M</given-names></name><name><surname>Tortola</surname><given-names>S</given-names></name><name><surname>Toyota</surname><given-names>M</given-names></name><etal/></person-group><article-title>Hypermethylation-associated inactivation of p14(ARF) is independent of p16(INK4a) methylation and p53 mutational status</article-title><source>Cancer Res</source><volume>60</volume><fpage>129</fpage><lpage>133</lpage><year>2000</year></element-citation></ref>
<ref id="b34-or-30-01-0185"><label>34</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Benanti</surname><given-names>JA</given-names></name><name><surname>Wang</surname><given-names>ML</given-names></name><name><surname>Myers</surname><given-names>HE</given-names></name><name><surname>Robinson</surname><given-names>KL</given-names></name><name><surname>Grandori</surname><given-names>C</given-names></name><name><surname>Galloway</surname><given-names>DA</given-names></name></person-group><article-title>Epigenetic down-regulation of ARF expression is a selection step in immortalization of human fibroblasts by c-Myc</article-title><source>Mol Cancer Res</source><volume>5</volume><fpage>1181</fpage><lpage>1189</lpage><year>2007</year></element-citation></ref>
<ref id="b35-or-30-01-0185"><label>35</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hollenbach</surname><given-names>PW</given-names></name><name><surname>Nguyen</surname><given-names>AN</given-names></name><name><surname>Brady</surname><given-names>H</given-names></name><etal/></person-group><article-title>A comparison of azacitidine and decitabine activities in acute myeloid leukemia cell lines</article-title><source>PLoS One</source><volume>5</volume><fpage>e9001</fpage><year>2010</year></element-citation></ref>
<ref id="b36-or-30-01-0185"><label>36</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Buchi</surname><given-names>F</given-names></name><name><surname>Spinelli</surname><given-names>E</given-names></name><name><surname>Masala</surname><given-names>E</given-names></name><etal/></person-group><article-title>Proteomic analysis identifies differentially expressed proteins in AML1/ETO acute myeloid leukemia cells treated with DNMT inhibitors azacitidine and decitabine</article-title><source>Leuk Res</source><volume>36</volume><fpage>607</fpage><lpage>618</lpage><year>2012</year></element-citation></ref>
<ref id="b37-or-30-01-0185"><label>37</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Zapotocky</surname><given-names>M</given-names></name><name><surname>Mejstrikova</surname><given-names>E</given-names></name><name><surname>Smetana</surname><given-names>K</given-names></name><name><surname>Stary</surname><given-names>J</given-names></name><name><surname>Trka</surname><given-names>J</given-names></name><name><surname>Starkova</surname><given-names>J</given-names></name></person-group><article-title>Valproic acid triggers differentiation and apoptosis in AML1/ETO-positive leukemic cells specifically</article-title><source>Cancer Lett</source><volume>319</volume><fpage>144</fpage><lpage>153</lpage><year>2012</year></element-citation></ref></ref-list></back>
<floats-group>
<fig id="f1-or-30-01-0185" position="float">
<label>Figure 1</label>
<caption>
<p>The expression of AML1-ETO induces growth arrest and inhibits the differentiation in leukemic U937 transformants. (A) AML1-ETO mRNA was specifically expressed in transfected U937 cells. (B) Western blot analyses showing the expression of AML1-ETO protein in U937-A/E1,2,3 and 4 individual clones. (C) Growth curves for U937-A/E1&#x02013;4, U937-Mock and U937-WT cells. The viability was measured daily by trypan blue exclusion. (D) For assessment of apoptosis, Annexin V assay was performed by flow cytometry. The numbers represent the percentage of the Annexin V<sup>&#x0002B;</sup> apoptotic cells (mean &#x000B1; SD) of triplicate samples in an independent experiment. (E) Whole-cell lysates were collected and immunoblotted for cleaved caspase-3. Equal loading was confirmed by actin immunoblot. (F) Percentage of cells positively stained for CD11b and CD14 myeloid surface markers as measured by FACS analysis. (G) Wright-Giemsa staining of cytospin preparation of U937-A/E1&#x02013;4, U937-Mock and U937-WT cells (scale bars, 5 &#x003BC;m). The results represent the average of three independent evaluations &#x000B1; SD. <sup>&#x0002A;</sup>P&lt;0.01 compared respectively with U937-Mock cell lines.</p></caption>
<graphic xlink:href="OR-30-01-0185-g00.gif"/></fig>
<fig id="f2-or-30-01-0185" position="float">
<label>Figure 2</label>
<caption>
<p>AML1-ETO-positive cells downregulate Bcl-2, CEBPA and p14<sup>ARF</sup> mRNA. Relative qRT-PCR quantization of (A) Bcl-2, (B) CEBPA and (C) p14<sup>ARF</sup> levels in AML1-ETO-expressing cells and non-expressing cells. Relative qRT-PCR quantization of (D) Bcl-2, (E) CEBPA and (F) p14<sup>ARF</sup> levels in 18 AML patient samples, 9 of which contained AML1-ETO &#x0005B;t(8;21) positive&#x0005D;. &#x003B2;-actin expression was used for cDNA quality control. The results represent the average of three independent evaluations &#x000B1; SD. <sup>&#x0002A;</sup>P&lt;0.001 compared respectively with U937-Mock cell lines.</p></caption>
<graphic xlink:href="OR-30-01-0185-g01.gif"/></fig>
<fig id="f3-or-30-01-0185" position="float">
<label>Figure 3</label>
<caption>
<p>Verification of AML1-ETO targets (Bcl-2, CEBPA and p14<sup>ARF</sup>) and identification of epigenetic status at these genes in AML1-ETO-positive cells.(A) AML1-ETO bound to the Bcl-2, CEBPA and p14<sup>ARF</sup> promoters. ChIP assays were performed using specific antibodies for ETO, RNA polymerase II (Pol II), as well as non-immune IgG. Immunoprecipitated chromatin was analyzed by quantitative real-time PCR with primers specific for the regions of the Bcl-2, CEBPA and p14<sup>ARF</sup> promoters. Input showed the amplification from sonicated chromatin. Amplification of GAPDH DNA was a control for nonspecific precipitated sequences. (B) The enrichment of MeCP2 at the Bcl-2, CEBPA and p14<sup>ARF</sup> promoters was analyzed by qChIP. Chromatin modifications by ChIP assays were analyzed in the indicated cell lines using antibodies specific for the (C) acetyl-H3 and (D) acetyl-H4 forms or (E) for the trimethylation of H3 lysine 9 and (F) trimethylation of H3 lysine 27 forms. Data are expressed as fold-differences relative to control conditions (in which IgG is used instead of specific antibodies in the ChIP). The results represent the average of three independent evaluations &#x000B1; SD. <sup>&#x0002A;</sup>P&lt;0.001 compared respectively with U937-Mock cell lines.</p></caption>
<graphic xlink:href="OR-30-01-0185-g02.gif"/></fig>
<fig id="f4-or-30-01-0185" position="float">
<label>Figure 4</label>
<caption>
<p>5-Aza or TB treatment induces Bcl-2, CEBPA and p14<sup>ARF</sup> expression. Relative levels of mRNA expression of (A) Bcl-2, (B) CEBPA and (C) p14<sup>ARF</sup> in 5-Aza or TB-exposed and non-exposed U937 cells. ChIP assay performed with antibodies for (D) MeCP2, (E) acetyl-H3 and (F) acetyl-H4 following (D) 5-Aza or (E and F) TB treatment in AML1-ETO-positive cells. IgG isotype control was used. The results represent the average of three independent evaluations &#x000B1; SD. <sup>&#x0002A;</sup>P&lt;0.001 compared respectively with untreated U937 cells.</p></caption>
<graphic xlink:href="OR-30-01-0185-g03.gif"/>
<graphic xlink:href="OR-30-01-0185-g04.gif"/></fig></floats-group></article>
