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<article xml:lang="en" article-type="research-article" xmlns:xlink="http://www.w3.org/1999/xlink">
<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">OR</journal-id>
<journal-title-group>
<journal-title>Oncology Reports</journal-title>
</journal-title-group>
<issn pub-type="ppub">1021-335X</issn>
<issn pub-type="epub">1791-2431</issn>
<publisher>
<publisher-name>D.A. Spandidos</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3892/or.2017.5680</article-id>
<article-id pub-id-type="publisher-id">or-38-01-0402</article-id>
<article-categories>
<subj-group>
<subject>Articles</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>XAF1 expression levels in a non-small cell lung cancer cohort and its potential association with carcinogenesis</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author"><name><surname>Schluckebier</surname><given-names>Luciene</given-names></name>
<xref rid="af1-or-38-01-0402" ref-type="aff">1</xref>
<xref rid="c1-or-38-01-0402" ref-type="corresp"/></contrib>
<contrib contrib-type="author"><name><surname>Aran</surname><given-names>Veronica</given-names></name>
<xref rid="af1-or-38-01-0402" ref-type="aff">1</xref></contrib>
<contrib contrib-type="author"><name><surname>De Moraes</surname><given-names>Joyce</given-names></name>
<xref rid="af1-or-38-01-0402" ref-type="aff">1</xref></contrib>
<contrib contrib-type="author"><name><surname>Paiva</surname><given-names>Heitor</given-names></name>
<xref rid="af2-or-38-01-0402" ref-type="aff">2</xref></contrib>
<contrib contrib-type="author"><name><surname>Sternberg</surname><given-names>Cinthya</given-names></name>
<xref rid="af1-or-38-01-0402" ref-type="aff">1</xref>
<xref rid="af3-or-38-01-0402" ref-type="aff">3</xref></contrib>
<contrib contrib-type="author"><name><surname>Ferreira</surname><given-names>Carlos Gil</given-names></name>
<xref rid="af1-or-38-01-0402" ref-type="aff">1</xref>
<xref rid="af3-or-38-01-0402" ref-type="aff">3</xref>
<xref rid="fn4-or-38-01-0402" ref-type="fn">4</xref></contrib>
</contrib-group>
<aff id="af1-or-38-01-0402"><label>1</label>Clinical Research Division, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil</aff>
<aff id="af2-or-38-01-0402"><label>2</label>Pathology Division, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil</aff>
<aff id="af3-or-38-01-0402"><label>3</label>Cancer Foundation, Rio de Janeiro, Brazil</aff>
<author-notes>
<corresp id="c1-or-38-01-0402"><italic>Correspondence to</italic>: Dr Luciene Schluckebier, Clinical Research Division, Instituto Nacional de C&#x00E2;ncer (INCA), Rua Andr&#x00E9; Cavalcanti 37, 2&#x00B0;andar, Rio de Janeiro, Brazil, E-mail: <email>lucfontes@gmail.com</email></corresp>
<fn fn-type="present-address" id="fn4-or-38-01-0402"><p><italic>Present address</italic>: <sup>4</sup>D&#x0027;Or Institute for Research and Education (IDOR), Rio de Janeiro, Brazil</p></fn>
</author-notes>
<pub-date pub-type="ppub"><month>01</month><year>2017</year></pub-date>
<pub-date pub-type="epub"><day>30</day><month>05</month><year>2017</year></pub-date>
<volume>38</volume>
<issue>1</issue>
<fpage>402</fpage>
<lpage>410</lpage>
<history>
<date date-type="received"><day>01</day><month>11</month><year>2016</year></date>
<date date-type="accepted"><day>26</day><month>01</month><year>2017</year></date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2017, Spandidos Publications</copyright-statement>
<copyright-year>2017</copyright-year>
</permissions>
<abstract>
<p>The process of lung carcinogenesis is still not well understood and involves different levels of regulation of several genes. The search for molecular biomarkers, which can be applicable to clinical practice, has been the focus of various studies. XIAP-associated factor 1 (XAF1) was previously shown to be downregulated in many types of tumors, including squamous cell lung cancer. XAF1 is a pro-apoptotic protein and its restoration was found to sensitize cancer cells to apoptotic stimuli; however, the precise mechanism involved in the downregulation of XAF1 in tumors is unknown and promoter hypermethylation or heat-shock transcription factor 1 (HSF1) may be involved. Therefore, the aim of the present study was to evaluate the expression of XAF1 in tumors and adjacent non-tumor specimens from non-small cell lung cancer (NSCLC) patients, and its potential association with various factors including clinicopathological characteristics and other genes involved in NSCLC. Our results indicated that XAF1 expression was markedly altered in NSCLC tumor samples when compared to that found in normal lung tissues. Predominantly, XAF1 was downregulated in the tumors, except in never-smoker patients. In addition, XAF1 may also be important in the whole cell stress mechanism where the p53 status is crucial.</p>
</abstract>
<kwd-group>
<kwd>lung cancer</kwd>
<kwd>XIAP-associated factor 1</kwd>
<kwd>human</kwd>
<kwd>genes</kwd>
<kwd>p53</kwd>
<kwd>heat shock transcription factor 1</kwd>
<kwd>carcinogenesis</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<sec sec-type="intro">
<title>Introduction</title>
<p>Lung cancer is the most lethal type of cancer accounting for nearly 1,600,000 deaths worldwide in 2012 (<xref rid="b1-or-38-01-0402" ref-type="bibr">1</xref>). Non-small cell lung cancer (NSCLC) is the predominant histological type, accounting for 80&#x2013;85&#x0025; of all cases (<xref rid="b2-or-38-01-0402" ref-type="bibr">2</xref>). Histological type and extension of disease at the time of diagnosis influence prognosis. Yet, even with the advent of new targeted therapies and improved methods for early diagnosis, patients with lung cancer have short-term survival (<xref rid="b1-or-38-01-0402" ref-type="bibr">1</xref>). Highlighting biologic markers is essential to clarify malignant lung processes, to identify patient subtypes and thereby to improve the poor prognosis of lung cancer.</p>
<p>The apoptosis pathway has been extensively studied in cancer research since malignant cells have the ability to evade this pathway. The disruption in the balance between pro-survival and pro-death cascades could break the barrier to cancer (<xref rid="b3-or-38-01-0402" ref-type="bibr">3</xref>). In this context, the inhibitors of apoptosis proteins comprise a range of molecules, which play a critical role in cell-acquired resistance to death. In many types of tumors, the levels of expression of certain molecules commonly appear upregulated, and one example is the X-linked inhibitor of apoptosis protein (XIAP) protein (<xref rid="b4-or-38-01-0402" ref-type="bibr">4</xref>). XIAP-associated factor 1 (XAF1) is a pro-apoptotic protein and it was primarily identified as an antagonist of XIAP, counteracting XIAP anti-caspase activity (<xref rid="b5-or-38-01-0402" ref-type="bibr">5</xref>). Data suggest a plethora of possible XAF1 functions favoring apoptosis either through survivin degradation (<xref rid="b6-or-38-01-0402" ref-type="bibr">6</xref>), mitochondrial cytochrome <italic>c</italic> release (<xref rid="b7-or-38-01-0402" ref-type="bibr">7</xref>,<xref rid="b8-or-38-01-0402" ref-type="bibr">8</xref>), p53 stabilization (<xref rid="b9-or-38-01-0402" ref-type="bibr">9</xref>,<xref rid="b10-or-38-01-0402" ref-type="bibr">10</xref>), as a modulator of cell cycle G<sub>2</sub>/M phase (<xref rid="b11-or-38-01-0402" ref-type="bibr">11</xref>), as an inductor of autophagy by upregulating Beclin 1 (<xref rid="b12-or-38-01-0402" ref-type="bibr">12</xref>), inhibition of the AKT pathway (<xref rid="b12-or-38-01-0402" ref-type="bibr">12</xref>) or also inhibition of VEGF (<xref rid="b13-or-38-01-0402" ref-type="bibr">13</xref>).</p>
<p>Loss of XAF1 has been observed in many types of tumors and is associated with increased malignant potential (<xref rid="b9-or-38-01-0402" ref-type="bibr">9</xref>,<xref rid="b13-or-38-01-0402" ref-type="bibr">13</xref>&#x2013;<xref rid="b21-or-38-01-0402" ref-type="bibr">21</xref>). Exceptionally, testicular germ cell tumors show XAF1 overexpression, which could be one of the reasons behind their extraordinary sensitivity to chemotherapy (<xref rid="b22-or-38-01-0402" ref-type="bibr">22</xref>). <italic>In vitro</italic> assays have shown that restoration of XAF1 expression sensitizes cancer cells to apoptotic stimuli (<xref rid="b5-or-38-01-0402" ref-type="bibr">5</xref>,<xref rid="b9-or-38-01-0402" ref-type="bibr">9</xref>).</p>
<p>Understanding the mechanism of XAF1 downregulation in tumors could be a promising strategy by which to introduce new agents capable of restoring XAF1 expression and improving drug response. There are a variety of processes under investigation. For example, epigenetic patterns altered within the promoter region of XAF1 genes have been identified in tumors. Hypermethylation of CpGs sites located in the 5&#x2032; proximal region was found to be associated with transcriptional silencing of XAF1 in gastric cancer (<xref rid="b14-or-38-01-0402" ref-type="bibr">14</xref>,<xref rid="b23-or-38-01-0402" ref-type="bibr">23</xref>), urogenital (<xref rid="b24-or-38-01-0402" ref-type="bibr">24</xref>) and colon (<xref rid="b25-or-38-01-0402" ref-type="bibr">25</xref>) cancer cell lines. However, epigenetic modifications are extremely complex and other XAF1 associations have been observed. Heat-shock factor 1 (HSF1) belongs to a family of transcriptional factors involved in cellular response under stress conditions. Once activated, HSF1 homotrimerizes, translocates to the nucleus and binds to heat shock response elements (HSEs) to regulate the transcription of target genes (<xref rid="b26-or-38-01-0402" ref-type="bibr">26</xref>). Notably, a functional HSF1-binding element was recognized in the XAF1 promoter gene and was found to be associated with the repression of XAF1 transcription (<xref rid="b27-or-38-01-0402" ref-type="bibr">27</xref>). Wang <italic>et al</italic> reported that gastrointestinal cancer (GI) overexpressed HSF1 compared to normal tissues and the XAF1 expression was inversely correlated with HSF1 in GI cancer cell lines (<xref rid="b27-or-38-01-0402" ref-type="bibr">27</xref>).</p>
<p>The tumor microenvironment can also provide abnormal conditions for cells. Dai <italic>et al</italic> reported that HSF1 may promote oncogenesis by facilitating cellular adaptation to the malignant lifestyle (<xref rid="b26-or-38-01-0402" ref-type="bibr">26</xref>). HSF1 was also reported as a coadjuvant at the p53 transcriptional machinery. In response to DNA damage, HSF1 can complex with p53 and regulate p53-responsive genes, but only in wild-type p53 cells (<xref rid="b28-or-38-01-0402" ref-type="bibr">28</xref>).</p>
<p>Recently, a link between XAF1 and p53 was demonstrated. The p53 responsive element was found within the promoter of the XAF1 gene and p53 was found to suppress the transcription of XAF1 (<xref rid="b29-or-38-01-0402" ref-type="bibr">29</xref>). Zou <italic>et al</italic> confirmed that there is a direct and functional interaction between p53 protein and the XAF1 promoter (<xref rid="b10-or-38-01-0402" ref-type="bibr">10</xref>). This interaction was found in wild-type p53, but not mutant p53 cells. Furthermore, there are no data integrating XAF1 and HSF1 expression and the p53 status in patient cohorts. Since there are limited studies performed in lung cancer patients (<xref rid="b21-or-38-01-0402" ref-type="bibr">21</xref>), we investigated the XAF1 expression in a prospective cohort of NSCLC patients, and also lung cancer cell lines. Our data may contribute to the understanding of the potential role of XAF1 as a tumor-suppressor gene and its suggestive regulations.</p>
</sec>
<sec sec-type="subjects|methods">
<title>Patients and methods</title>
<sec>
<title/>
<sec>
<title>Primary tumor tissues and cancer cell lines</title>
<p>A total of 39 primary non-small cell lung tumor and their adjacent non-tumor tissues, were prospectively obtained by surgical resection at the Brazilian National Cancer Institute (INCA). Patients were recruited from January 2006 to January 2008. Inclusion criteria were primary resectable lung tumors, non-metastatic and non-small cell subtype. Pancoast tumors were excluded from our cohort. All patients enrolled provided informed consent before surgery. Tissue specimens were snap-frozen immediately and stored (until used) in liquid nitrogen according to the Brazilian National Tumor and DNA Bank (BNT-INCA) guidelines. Data regarding clinical and histopathological characteristics were collected from medical records based on the World Health Organization and 2009 tumor-node-metastasis (TNM) classification guidelines. Patients were classified according to smoking status: never-smokers, individuals who had smoked 100 cigarettes in their lifetime; former smokers, who had quit smoking for at least one year; current smokers, those who smoke &#x003E;100 cigarettes and have also smoked for less than one year. As an indication of cumulative smoking exposure, pack-years were defined as the average number of packs smoked/day multiplied by years smoked. All patients received a detailed explanation concerning the study aims and procedures and a signed informed consent form was provided. The protocol was previously accepted by the Instituto Nacional de Cancer Institutional Review Board (Protocol 31/05).</p>
</sec>
<sec>
<title>Cell culture</title>
<p>NSCLC cell lines with different mutational statuses were kindly provided by Dr Giuseppe Giaccone (Free University Medical Center, Amsterdam, The Netherlands), H460 and A549; ACC-LC-94, ACC-LC-319 and Calu-1 cells were from Dr Takashi Takahashi (Center for Neurological Diseases and Cancer, Nagoya University Graduate School of Medicine, Japan); H820 and H1975 cells were from Dr Michael Peyton (Human Center for Therapeutic Oncology Research, University of Texas Southwestern Medical Center, TX, USA). Mutant cells for <italic>p53</italic> included ACC-LC-94, ACC-LC-319, Calu-1 and H820. Except for H1975, all cell lines present <italic>K-ras</italic> mutation. For <italic>EGFR</italic> status only H1975 and H820 were mutated. Cells were cultured in RPMI-1640 medium supplemented with 10&#x0025; fetal calf serum, containing penicillin/streptomycin/glutamine (Gibco-BRL, Grand Island, NY, USA) at 37&#x00B0;C under 10&#x0025; CO<sub>2</sub>.</p>
</sec>
<sec>
<title>RNA extraction and cDNA synthesis</title>
<p>Total RNA was isolated from cell lines or frozen tissues using TRIzol<sup>&#x00AE;</sup> (Invitrogen Life Technologies) and purified with Qiagen RNeasy kit (Qiagen, Hilden, Germany) according to the manufacturer&#x0027;s protocol. RNA concentrations were determined using NanoDrop<sup>&#x00AE;</sup> ND-1000 spectrophotometer. The RNA was reverse transcribed using SuperScript II Reverse Transcriptase (Invitrogen Life Technologies) according to the manufacturer&#x0027;s instructions. In summary, 1 &#x00B5;g of total RNA was used to synthesize cDNA using oligo(dT)<sub>15</sub> (Promega, Madison, WI, USA) at 65&#x00B0;C for 5 min, followed by incubation with the reverse transcriptase enzyme at 42&#x00B0;C for 50 min, and inactivation at 70&#x00B0;C for 15 min. The resulting complementary DNA was diluted in ultra-pure water and used in the real-time amplification reaction.</p>
</sec>
<sec>
<title>Quantitative real-time PCR</title>
<p>The mRNA levels of XAF1 were measured by real-time RT-PCR based on TaqMan<sup>&#x00AE;</sup> chemistry and quantified with an ABI PRISM 7500 Fast Sequence Detection system (Applied Biosystems, Foster City, CA, USA). An internal control gene, GAPDH, was used to normalize the mRNA levels. The XAF1 and GAPDH mRNA levels were assessed using pre-developed TaqMan<sup>&#x00AE;</sup> Gene Expression Assays part no. Hs00213882_m1 and 4310884E, respectively (Assay-on-Demand&#x2122;; Applied Biosystems). A commercially available cDNA derived from normal human lung tissue was used to compare normal lung XAF1 mRNA expression levels with the ones from different cell lines (Ambion&#x0027;s FirstChoice<sup>&#x00AE;</sup> PCR-Ready Human Lung cDNA; Applied Biosystems). The patient tumor samples were compared to their adjacent normal tissues. All primers and probes were allocated in exon-exon regions, thus, preventing the amplification of residual genomic DNA. Real-time PCR was performed in duplicate reactions using TaqMan<sup>&#x00AE;</sup> Fast Universal PCR Master Mix (Applied Biosystems). Instrument raw data (fluorescence) of all the samples was converted to threshold cycles by SDS 1.2 software (Applied Biosystems). All target gene amplification was normalized with their internal control gene expression (&#x0394;Ct). To calculate the relative expression level, &#x0394;Ct tumor was compared with the &#x0394;Ct adjacent non-tumor tissue for patient samples. For the cell lines, comparison was made to a commercially normal human lung control. The relative expression value was log2-transformed for statistical analysis. The fold-change between samples and the human lung control represents the relative XAF1 expression in the cell lines. The fold-change between non-tumoral and tumoral tissues represents the relative expression in the patient cohort. Patients with loss of XAF1 expression were defined as tumors expressing a fold-change 1/5 below the non-tumoral value.</p>
</sec>
<sec>
<title>Immunohistochemistry</title>
<p>The XAF1 and HSF1 proteins were evaluated by immunohistochemistry. Formalin-fixed paraffin-embedded serial sections (3 &#x00B5;m) were mounted on glass slides (ImmunoSlide; EasyPath<sup>&#x00AE;</sup> S&#x00E3;o Paulo, SP, Brazil), dewaxed with xylene and gradually hydrated in ethanol. The slides were heated in a pressure cooker with a citrate buffer (pH 6,0) for antigen activation. After cooling, endogenous hydrogen peroxidase and unspecific proteins were blocked. Anti-XAF1 antibody (1:500; Abcam, Cambridge, MA, USA) and anti-HSF1 antibody (1:100; Cell Signaling Technology, Beverly, MA, USA) were incubated at 37&#x00B0;C for 45 min and at 4&#x00B0;C overnight. Then, the immunoslides were blocked with Primary Block and secondary antibody treatment (Novolink Polymer; Novocastra, Newcastle, UK). Immunostaining was carried out with diaminobenzidine solution and counterstained with hematoxylin.</p>
<p>In both analyses, the score was determined using nuclear staining. XAF1 expression was scored using two measures: the rate of cells stained classified as 1 (&#x003C;5&#x0025;), 2 (5&#x2013;24&#x0025;), 3 (25&#x2013;49&#x0025;), 4 (50&#x2013;74&#x0025;) and 5 (&#x003E;75&#x0025;); and staining intensity graded as 1 (weak) and 2 (strong). The final score was calculated by multiplying the area stained and the intensity resulting in three expression levels: low (<xref rid="b1-or-38-01-0402" ref-type="bibr">1</xref>&#x2013;<xref rid="b3-or-38-01-0402" ref-type="bibr">3</xref>); moderate (<xref rid="b4-or-38-01-0402" ref-type="bibr">4</xref>&#x2013;<xref rid="b6-or-38-01-0402" ref-type="bibr">6</xref>); and high (<xref rid="b8-or-38-01-0402" ref-type="bibr">8</xref>&#x2013;<xref rid="b10-or-38-01-0402" ref-type="bibr">10</xref>) (<xref rid="b30-or-38-01-0402" ref-type="bibr">30</xref>). Reduction in XAF1 protein was considered when samples with high expression levels became moderate or low.</p>
<p>HSF1 scoring was based on staining intensity with 0 indicating no staining, 1 indicating low-level, and 2 indicating strong staining. Cases with no detectable HSF1, or only cytoplasmatic reaction were defined HSF1-negative and cases with low or strong nuclear staining were defined HSF1-positive (<xref rid="b36-or-38-01-0402" ref-type="bibr">36</xref>).</p>
</sec>
<sec>
<title>Mutation analysis</title>
<p>TP53 mutation analysis was performed according to the standard protocol at the International Agency for Research on Cancer (IARC) (<uri xlink:href="http://www-p53.iarc.fr/Download/TP53_DirectSequencing_IARC.pdf">http://www-p53.iarc.fr/Download/TP53_DirectSequencing_IARC.pdf</uri>). Approximately 25 mg of fresh tissue was processed to obtain DNA using the QIAamp DNA Mini kit (Qiagen) according to the manufacturer&#x0027;s protocol. TP53 mutation was assessed by direct sequencing using primers described as follows: 5&#x2032;-tgttcactt gtgccctgact-3&#x2032; and 5&#x2032;-tctctgggaggaggggttaa-3&#x2032; (exon 5&#x2013;6); 5&#x2032;-ctt gccacaggtctccccaa-3&#x2032; and 5&#x2032;-tctgcttgccgctgacccct-3&#x2032; (exon 7); 5&#x2032;-ttgggagtagatggagccct-3&#x2032; and 5&#x2032;-aaagtttccagtctaacact-3&#x2032; (exon 8&#x2013;9). Sequencing reaction was carried out using BigDye<sup>&#x00AE;</sup> Terminator v1.1 Cycle Sequencing kit. Before analysis, purification of the sequencing reaction products was carried out using the sequencing service (IARC) with 96-well MultiScreen filtration plates (G50; Pharmacia/Millipore, Billerica, MA, USA). PCR products were analyzed using a 16-capillary automated sequencer (ABI PRISM<sup>&#x00AE;</sup> 3100 Genetic Analyzer; Applied Biosystems), based on the Sanger method. Chromatograms were semi-automatically analyzed by visual inspection of sequences imported into the sequence analysis software using the reference sequence, NC_000017.9, from GenBank (<uri xlink:href="http://www-p53.iarc.fr/TP53sequence_NC_000017-9.html">http://www-p53.iarc.fr/TP53sequence_NC_000017-9.html</uri>). Variations were checked with the mutation validation tool available at IARC at <uri xlink:href="http://www-p53.iarc.fr/Mutation ValidationCriteria.asp">http://www-p53.iarc.fr/Mutation ValidationCriteria.asp</uri>. This tool allowed us to check whether the variation is a known polymorphism or a mutation, and provided frequency and functional data as reported in the IARC TP53 database (<uri xlink:href="http://www-p53.iarc.fr">http://www-p53.iarc.fr</uri>).</p>
</sec>
<sec>
<title>Statistical analysis</title>
<p>Data analysis was conducted using Statistical Package for Social Sciences (SPSS) version 13.0 software. Differences between XAF1 expression in cell samples were evaluated by Students t-test. Paired adjacent non-tumoral and tumoral samples were compared by McNemar test. The Chi-square test was applied to evaluate the univariative correlations between XAF1 expression and the clinicopathological parameters. Kaplan-Meier estimates were calculated to detail differences in recurrence-free and overall survival by XAF1 expression and were tested for statistical significance using the log-rank test. All p-values were two-tailed and p&#x003C;0.05 was considered to indicate a statistically significant result.</p>
</sec>
</sec>
</sec>
<sec sec-type="results">
<title>Results</title>
<sec>
<title/>
<sec>
<title>Depletion of XAF1 mRNA expression occurs in different lung cancer cell lines</title>
<p>To investigate the potential role of XAF1 as a tumor-suppressor gene in lung tumorigenesis, we characterized the XAF1 mRNA expression levels in a variety of lung cancer cell lines. The cDNA derived from normal lung human tissue was used as a reference to compare XAF1 expression in cell lines in relation to normal lung tissue. All cells showed a significant reduction in the XAF1 mRNA expression level when compared to the normal lung control (<xref rid="f1-or-38-01-0402" ref-type="fig">Fig. 1</xref>). The levels of XAF1 mRNA were low to non-existent in the H460, A549, ACC-LC-94 and ACC-LC-319 cells, while in the mutant EGFR cells (H820 and H1975) and TP53-deleted cell (Calu-1), the levels were higher than that noted in the other cells (<xref rid="f1-or-38-01-0402" ref-type="fig">Fig. 1</xref>).</p>
</sec>
<sec>
<title>Depletion of XAF1 expression is correlated with increased malignant potential in patient samples</title>
<p>After obtaining the expression levels of XAF1 in the cell lines, we conducted analysis using our patient cohort. Clinicopathological characteristics of 39 patients with NSCLC treated at our institute are described in <xref rid="tI-or-38-01-0402" ref-type="table">Table I</xref>. The median follow-up was 63 months. During this period, 16 patients died, and 19 had progressive disease.</p>
<p>Primary lung specimens were evaluated in 39 matched sets of adjacent non-tumor and tumor tissues. All patients had a markedly tumor-specific low expression of XAF1 mRNA with a mean of 0.39 [95&#x0025; confidence interval (CI), 0.28&#x2013;0.49) in the non-tumor and 0.09 (95&#x0025; CI, 0.05&#x2013;0.15) in the tumor tissue group (<xref rid="f2-or-38-01-0402" ref-type="fig">Fig. 2A</xref>). The relative expression values indicated that almost all patients had a reduction in XAF1 expression values in the tumor and only two showed tumor expression higher than that noted in the matched tissue (<xref rid="f2-or-38-01-0402" ref-type="fig">Fig. 2B</xref>).</p>
<p>Regarding protein levels, a reduction in XAF1 expression was observed in lung tumor samples upon immunohistochemical analyses performed using the anti-XAF1 antibody. In contrast, high XAF1 protein expression was found predominantly in non-tumor tissues (<xref rid="f3-or-38-01-0402" ref-type="fig">Fig. 3A and B</xref>). When paired samples were compared, with exception of one sample in which increased XAF1 protein expression was observed and another which maintained a high score, all other samples significantly showed a decrease in the expression of XAF1 protein levels after malignant transformation (McNemar test; p=0.001) (<xref rid="f4-or-38-01-0402" ref-type="fig">Fig. 4A and B</xref>). In order to summarize and better visualize the results obtained from the XAF1 expression experiments according to IHC score, two different plots are shown in <xref rid="f4-or-38-01-0402" ref-type="fig">Fig. 4</xref>.</p>
</sec>
<sec>
<title>XAF1 depletion is correlated with HSF1 protein expression in lung tissues</title>
<p>A functional HSF1-binding element was recognized in the XAF1 promoter gene and was related to the repression of XAF1 transcription (<xref rid="b27-or-38-01-0402" ref-type="bibr">27</xref>). Therefore, in order to investigate whether XAF1 downregulation in lung tumors is associated with activated HSF1, the HSF1 protein was evaluated in all tumoral/adjacent non-tumoral matched tissues via immunohistochemistry. HSF1 protein can appear in both the cytoplasm and nucleus, but the active form is localized only in the nucleus. In all tumor specimens, strong nuclear staining of HSF1 was observed. In contrast, we did not observe HSF1 expression in the adjacent non-tumoral tissues (<xref rid="f5-or-38-01-0402" ref-type="fig">Fig. 5</xref>).</p>
</sec>
<sec>
<title>XAF1 protein reduction occurs in wild-type p53 tumors</title>
<p>Published data (<xref rid="b29-or-38-01-0402" ref-type="bibr">29</xref>) have shown that XAF1 is a target gene of p53, since it carries a p53 responsive element within the XAF1 promoter region. In addition, the presence of wild-type p53 was shown to influence the transcriptional repression of XAF, whereas in mutated p53 cells this did not occur (<xref rid="b29-or-38-01-0402" ref-type="bibr">29</xref>). Following these results, we decided to analyze whether XAF1 reduction could have an association with TP53 mutational status, by comparing the score levels of XAF1 protein expression noted in <xref rid="f4-or-38-01-0402" ref-type="fig">Fig. 4</xref> with the p53 mutational status in our patient cohort. We observed that in all wild-type p53 patients, except one, there was a loss in XAF1 protein expression in the tumor tissue compared to that noted in the adjacent non-tumor tissue (<xref rid="tII-or-38-01-0402" ref-type="table">Table II</xref>). Nevertheless, we did not observe the same pattern when comparing the mutant p53 status and XAF1 mRNA level between specimens. Regarding mutation types, we did not observe a specific pattern. The patients from our cohort showed different TP53 mutations and also deletions (data not shown). Not all 39 patients had obtained results due to technical difficulties related to the sample quality.</p>
</sec>
<sec>
<title>Correlation between clinicopathological characteristics, prognosis and XAF1 expression</title>
<p>Clinicopathological characteristics and prognosis were correlated according to XAF1 tumor expression as shown in <xref rid="tIII-or-38-01-0402" ref-type="table">Table III</xref>. Expression levels of XAF1 appeared to be independent of sex, pathological stage, tumor size, nodal invasion and histological subtype. However, a correlation was noted between XAF1 reduction and age and undifferentiated tumor grade (p&#x003C;0.01). Patients in the group of XAF1 depletion tended to have a poor differentiated histological grade.</p>
<p>The levels of XAF1 expression were also analyzed according to smoking behavior. Tumors from 2 out of 3 never-smoker patients, presented the highest XAF1 expression in the entire tumor cohort, both at the mRNA and protein levels. In addition, the frequency of XAF1 reduction was higher in the group of smoker patients than in the group of former- and-never smokers (p=0.05).</p>
<p>In order to further investigate the clinicopathological characteristics, we compared XAF1 expression levels with the risk of tumor-recurrence or tumor-related death and the data were analyzed by Kaplan-Meier estimates. The result indicated that there were no significant associations in higher XAF1 losses and recurrence-free survival and overall survival (<xref rid="f6-or-38-01-0402" ref-type="fig">Fig. 6</xref>).</p>
</sec>
</sec>
</sec>
<sec sec-type="discussion">
<title>Discussion</title>
<p>The process of lung carcinogenesis is still not well understood and several studies have tried to investigate target molecules to improve therapy and survival. A particular molecule called XAF1, which belongs to the apoptosis pathway, was investigated by us. The putative tumor-suppressor gene XAF1 has been found underexpressed in various cancer tissues and cell lines and, in addition, data generated elsewhere showed that restoration of its expression could increase sensitivity to apoptotic stimuli (<xref rid="b14-or-38-01-0402" ref-type="bibr">14</xref>&#x2013;<xref rid="b21-or-38-01-0402" ref-type="bibr">21</xref>,<xref rid="b30-or-38-01-0402" ref-type="bibr">30</xref>).</p>
<p>Low expression of XAF1 was observed in squamous cell lung cancer (<xref rid="b21-or-38-01-0402" ref-type="bibr">21</xref>). In the present study, we identified low expression of XAF1 in NSCLC cells lines compared to that noted in normal lung (<xref rid="f1-or-38-01-0402" ref-type="fig">Fig. 1</xref>). However, to the best of our knowledge, this is the first study to describe the same pattern in both lung adenocarcinoma cell lines and patient specimens.</p>
<p>Despite no significant evidence in prognosis (<xref rid="f6-or-38-01-0402" ref-type="fig">Fig. 6</xref>), our cohort showed an association between XAF1 and increased malignancy. An association between reduced XAF1 and a higher histopathological grade was observed in our tumor specimens (<xref rid="f2-or-38-01-0402" ref-type="fig">Fig. 2</xref>) corroborating the results of previous studies (<xref rid="b15-or-38-01-0402" ref-type="bibr">15</xref>,<xref rid="b21-or-38-01-0402" ref-type="bibr">21</xref>,<xref rid="b31-or-38-01-0402" ref-type="bibr">31</xref>&#x2013;<xref rid="b33-or-38-01-0402" ref-type="bibr">33</xref>). This may reinforce the potential role of XAF1 in lung tumor progression. Restoration of XAF1 could be a target mechanism to suppress malignant progression in the lung, as described in the literature for other tissue types. To that end a better understanding of the mechanisms leading to its downregulation is warranted. The first evidence for a possible cause of downregulation has been focused in hypermethylated regions at the XAF1 promoter gene (<xref rid="b14-or-38-01-0402" ref-type="bibr">14</xref>). Therefore, we explored hypermethylation of CpG sites near the 5&#x2032; proximal region (&#x2212;2 to &#x2212;246 nt) that appeared strongly correlated with transcriptional silencing. We frequently observed the same profile in both non-tumor and tumor tissues by the methylation-specific PCR technique (data not shown). In order to investigate specific CpG sites and quantify the methylated percentage, we performed quantitative real-time PCR. One primer covered proximal CpGs sites &#x2212;3 and &#x2212;4 and the second one covered &#x2212;5 to &#x2212;7 CpG sites. After evaluating the methylation pattern in all matched paired lung tissues, we observed that 13 (31&#x0025;) tumor tissues were hypermethylated (data not shown). The percentage of methylation varied from 2 to 30&#x0025; in the CpG site &#x2212;3 and &#x2212;4 and from 2 to 88&#x0025; in CpG site &#x2212;5 to &#x2212;7. When CpG &#x2212;3 and &#x2212;4 site appeared hypermethylated, the CpG site &#x2212;5 to &#x2212;7 was usually highlighted too. Almost all cases of non-tumor adjacent tissues appeared unmethylated or &#x003C;1&#x0025; methylated (data not shown). Our intention was to explore methylated areas with possible useful techniques applicable to the clinic setting, such as PCR. Since the XAF1 promoter region does not contain defined CpG islands but instead it contains CpG sites too closely, we found it difficult to deeply explore methylated areas using these techniques.</p>
<p>Meanwhile, the silencing of XAF1 in tumors has been investigated by other groups. Wang <italic>et al</italic> observed a functional HSF1-binding element (HSE/XAF1) located at &#x2212;862/-821 of the <italic>XAF1</italic> gene. They showed that HSF1 could repress XAF1 transcription and this could be reversed by blocking HSF1 binding (<xref rid="b23-or-38-01-0402" ref-type="bibr">23</xref>). Under oncogenic stimulus, HSF1 could affect cell transformation, proliferation, signal transduction and metabolic process in favor of survival. Therefore, HSF1 could respond to oncogenic stimuli and add on the global network to support tumorigenesis (<xref rid="b26-or-38-01-0402" ref-type="bibr">26</xref>). HSF1 can also have a dual action under stressful conditions. In normal cells it was described as a molecule, which protects cells from pathophysiological conditions such as hypoxia, thermal injury and age-related neurodegeneration (<xref rid="b34-or-38-01-0402" ref-type="bibr">34</xref>,<xref rid="b35-or-38-01-0402" ref-type="bibr">35</xref>). Since normal physiology is altered in the tumor microenvironment, HSF1 could also enhance malignancy levels. Notably, breast cancer containing high HSF1 was associated with poor prognosis (<xref rid="b36-or-38-01-0402" ref-type="bibr">36</xref>). Another study showed that HSF1<sup>&#x2212;/&#x2212;</sup> mice presented superior survival to HSF1<sup>&#x002B;/&#x002B;</sup> mice after tumor induction, as well as enhanced resistance to tumor formation (<xref rid="b26-or-38-01-0402" ref-type="bibr">26</xref>).</p>
<p>In the present study, we investigated HSF1 protein and we observed that higher levels of HSF1 protein were translocated to the nucleus (where HSF1 is active) in tumor tissues (<xref rid="f5-or-38-01-0402" ref-type="fig">Fig. 5</xref>). Moreover, absence of expression was detected in non-tumor paired tissues indicating that HSF1 may be activated during the lung carcinogenesis process. This is consistent with the findings in gastric and colon cancer, where Li <italic>et al</italic> observed higher expression of HSF1 in gastrointestinal cancer tissues than in normal tissues (<xref rid="b37-or-38-01-0402" ref-type="bibr">37</xref>). They also showed that stress stimuli of gastrointestinal cancer cell lines could upregulate HSF1 expression, but inversely downregulate XAF1 expression (<xref rid="b37-or-38-01-0402" ref-type="bibr">37</xref>). In our immunohistochemical results (<xref rid="f3-or-38-01-0402" ref-type="fig">Figs. 3</xref> and <xref rid="f5-or-38-01-0402" ref-type="fig">5</xref>), a reduction in XAF1 expression was observed in lung tumor samples (<xref rid="f3-or-38-01-0402" ref-type="fig">Fig. 3</xref>), whereas a strong nuclear staining of HSF1 was observed in the tumor tissues (<xref rid="f5-or-38-01-0402" ref-type="fig">Fig. 5</xref>). Since HSF1 was shown to downregulate XAF1 expression in tumors, it may be informative to develop a selective HSF1 inhibitor in order to observe whether the levels of XAF1 could be restored in cancer cells. One difficulty which must be overcome is the fact that HSF1 is highly versatile, involved in numerous stress and non-stress related cell processes (<xref rid="b38-or-38-01-0402" ref-type="bibr">38</xref>). Furthermore, it is also an important link for the translational machinery, since it was shown that a block in translation in cancer cells resulted in inhibition of HSF1 binding to its target genes (<xref rid="b39-or-38-01-0402" ref-type="bibr">39</xref>). Thus, another possible way to block HSF1 activity may be to interfere with the ribosomal function in the cancer cells.</p>
<p>Logan <italic>et al</italic> supports the idea of HSF1 implicated in cell conjecture via p53-regulated transcription. It is well known that p53 can predominantly act in favor of cell cycle arrest and apoptosis under DNA damage. However it can also act as a pro-cell survival factor depending on the extent of damage or stress duration. Under genotoxic stress, evidence shows that p53 transcriptional activity is dependent upon HSF1 interaction and that HSF1 also facilitates phosphorylation of p53 serine residue 6 and 15 via the Chk1/ATR complex (<xref rid="b28-or-38-01-0402" ref-type="bibr">28</xref>). Although these findings indicate pro-apoptotic effects, the author advocates that in response to oncogenic activation, HSF1 may redirect its function via p53 to promote cell survival and tumorigenesis (<xref rid="b28-or-38-01-0402" ref-type="bibr">28</xref>).</p>
<p>XAF1 has been reported as a target gene for p53 since it carries a p53 responsive element (&#x2212;86 to &#x2212;95 nt) within the XAF1 promoter region (<xref rid="b29-or-38-01-0402" ref-type="bibr">29</xref>). In cancer cells, the presence of wild-type p53 could lead to transcriptional repression of XAF1 while in mutated p53 cells this did not occur (<xref rid="b29-or-38-01-0402" ref-type="bibr">29</xref>). Byun <italic>et al</italic> reported for the first time the inverse correlation between loss of XAF1 and p53 mutations in gastric cells and tumors (<xref rid="b14-or-38-01-0402" ref-type="bibr">14</xref>), but to date there are scarce studies investigating other cohorts. In the present study, p53-deleted cells had higher XAF1 expression than wild-type ones indicating a possible feedback loop mechanism (<xref rid="f1-or-38-01-0402" ref-type="fig">Fig. 1</xref>). In lung tumor specimens, we observed a reduction in XAF1 expression compared to the paired non-tumoral adjacent tissue indicating that XAF1 expression could be influenced by the level of tumorigenesis (<xref rid="f2-or-38-01-0402" ref-type="fig">Fig. 2B</xref>). In our wild-type 53 patients, we observed a reduction in XAF1 protein levels in tumor samples when compared to adjacent non-tumor tissue (<xref rid="tII-or-38-01-0402" ref-type="table">Table II</xref>). In contrast, we did not observe the same pattern in mutant p53 specimens (<xref rid="tII-or-38-01-0402" ref-type="table">Table II</xref>). Although this could be further confirmed by increasing the cohort number, one possible reason for this result could be that XAF1 may be upregulated in order to compensate for mutant p53, indicating a possible feedback-loop mechanism. It was recently observed that XAF1 forms a positive feedback loop with p53 by acting as a molecular switch in p53-decision making and that different isoforms of XAF1 have different functions (<xref rid="b10-or-38-01-0402" ref-type="bibr">10</xref>,<xref rid="b40-or-38-01-0402" ref-type="bibr">40</xref>).</p>
<p>We also observed that all never-smoker patients did not lose XAF1 expression and among them, two exhibited a higher level of XAF1 in the tumor tissue than that in the adjacent tissue (<xref rid="tIII-or-38-01-0402" ref-type="table">Table III</xref>). Conversely, XAF1 expression was reduced in smokers, showing that XAF1 expression could be associated with smoking (<xref rid="tIII-or-38-01-0402" ref-type="table">Table III</xref>; p=0.05). Moreover, cells harboring EGFR mutation (an alteration more commonly observed in never-smokers) also had higher XAF1 expression when compared to EGFR wild-type cells. Altogether, these findings are congruent with the current distinction between tumors from smokers and never-smokers. In the mid 2000&#x2032;s, non-smoking-related lung cancer became an independent disease from the well-established lung cancer in smokers (<xref rid="b41-or-38-01-0402" ref-type="bibr">41</xref>). Different studies indicated a heavier mutation burden and a greater perturbation of gene expression levels in smoking-related lung cancer than in non-smoking, and different driver genes were identified in non-smoker vs. smoker tumors (<xref rid="b42-or-38-01-0402" ref-type="bibr">42</xref>,<xref rid="b43-or-38-01-0402" ref-type="bibr">43</xref>). In addition, distinct characteristics were observed in non-smoker patients, which could vary according to sex, histological type and ethnic origin. For example, most occurrences were in woman, Asian people and the predominant histological type was adenocarcinoma (<xref rid="b41-or-38-01-0402" ref-type="bibr">41</xref>). Our findings should be further validated in a larger cohort of never-smoker patients.</p>
<p>In conclusion, our results indicated that XAF1 expression is altered in NSCLC tumor samples when compared to normal tissue and that the XAF1 status was influenced by different clinicopathological characteristics, such as smoking, EGFR and TP53 mutation status. However, no significant associations were observed for both tumor-recurrence or tumor-related death. The limited sample size could have influenced these results, since patients in the group of with lack of XAF1 tended to have poorly differentiated histological grade. It may be interesting to validate our findings in a larger cohort, including stage IV patients. In addition, XAF1 not only plays a role as a tumor suppressor but it is also important in the entire cell stress mechanism where the p53 status is crucial. It remains to be determined which molecules belonging to different signaling cascades may mediate XAF1 activation or downregulation in lung cancer. Moreover, further understanding of the molecular mechanisms underlying HSF1 must to be increased, and it may be valuable to determine whether HSF1 may be a therapeutic target by which to mediate XAF1 levels in lung cancer cells.</p>
</sec>
</body>
<back>
<ack>
<title>Acknowledgements</title>
<p>The present study was supported by the Ary Frauzino Cancer Foundation and the Coordination for the Improvement of Higher Education Personnel (CAPES). We would like to thank all the patients involved.</p>
</ack>
<glossary>
<def-list>
<title>Abbreviations</title>
<def-item><term>XAF1</term><def><p>XIAP-associated factor 1</p></def></def-item>
<def-item><term>HSF1</term><def><p>heat-shock transcription factor 1</p></def></def-item>
<def-item><term>NSCLC</term><def><p>non-small cell lung cancer</p></def></def-item>
<def-item><term>XIAP</term><def><p>X-linked inhibitor of apoptosis protein</p></def></def-item>
<def-item><term>HSEs</term><def><p>heat shock response elements</p></def></def-item>
<def-item><term>GI</term><def><p>gastrointestinal cancer</p></def></def-item>
<def-item><term>CI</term><def><p>confidence interval</p></def></def-item>
<def-item><term>Nt</term><def><p>nucleotides</p></def></def-item>
<def-item><term>INCA</term><def><p>Instituto Nacional de C&#x00E2;ncer</p></def></def-item>
<def-item><term>BNT-INCA</term><def><p>Brazilian National Tumor and DNA Bank</p></def></def-item>
</def-list>
</glossary>
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</back>
<floats-group>
<fig id="f1-or-38-01-0402" position="float">
<label>Figure 1.</label>
<caption><p><italic>XAF1</italic> mRNA expression levels were determined in a lung cancer cell line panel and in a non-cancer tissue lung control by real-time RT-PCR and were normalized to <italic>GAPDH</italic> and compared to a commercially available normal lung tissue (Ambion&#x0027;s FirstChoice<sup>&#x00AE;</sup> PCR-Ready Human Lung cDNA; Applied Biosystems); &#x002A;p&#x003C;0.001 by Students t-test.</p></caption>
<graphic xlink:href="OR-38-01-0402-g00.tif"/>
</fig>
<fig id="f2-or-38-01-0402" position="float">
<label>Figure 2.</label>
<caption><p><italic>XAF1</italic> mRNA expression in NSCLC patients. (A) Significant low expression in lung tumor specimens by Wilcoxon test (p&#x003C;0.0001). (B) Relative expression levels for each tumor sample shown as a fold-change relative to its own adjacent non-tumor sample, in which the value was considered equal to one. Black bars represent patients with low tumor expression and streaked bars show tumor tissue having higher XAF1 levels than their paired non-tumor tissue.</p></caption>
<graphic xlink:href="OR-38-01-0402-g01.tif"/>
</fig>
<fig id="f3-or-38-01-0402" position="float">
<label>Figure 3.</label>
<caption><p>Immunohistochemical staining of XAF1 marker in NSCLC tissue. XAF1 protein expression was observed in the adjacent non-tumor vs. the tumor tissue (magnifications, &#x00D7;400 and &#x00D7;100) using the anti-XAF1 antibody (1:500). (A) Adjacent non-tumor lung tissue. (B) Lung tumor tissue. The method used to score XAF1 expression is described in the Materials and methods section.</p></caption>
<graphic xlink:href="OR-38-01-0402-g02.tif"/>
</fig>
<fig id="f4-or-38-01-0402" position="float">
<label>Figure 4.</label>
<caption><p>Immunohistochemical results comparing XAF1 expression levels in adjacent non-tumor vs. tumor tissues. (A) Patients are grouped by score staining. (B) Patients are scrutinized by their expression changes between non-tumor and tumor tissues.</p></caption>
<graphic xlink:href="OR-38-01-0402-g03.tif"/>
</fig>
<fig id="f5-or-38-01-0402" position="float">
<label>Figure 5.</label>
<caption><p>Expression of HSF1 protein by immunohistochemical analysis (magnifications, &#x00D7;400 and &#x00D7;100) using the anti-HSF1 antibody. (A) Adjacent non-tumor lung tissue. (B) Well-differentiated lung adenocarcinoma. (C) Moderately differentiated squamous cell lung carcinoma.</p></caption>
<graphic xlink:href="OR-38-01-0402-g04.tif"/>
</fig>
<fig id="f6-or-38-01-0402" position="float">
<label>Figure 6.</label>
<caption><p>Kaplan-Meyer estimates of (A) overall survival and (B) progression free-survival in patients according to a reduction or not in XAF1 mRNA level (reduction was considered as the expression in the tumor tissue five times less than the level in the adjacent non-tumor paired tissue). In both curves, tick marks on the survival curves indicate censoring of data.</p></caption>
<graphic xlink:href="OR-38-01-0402-g05.tif"/>
</fig>
<table-wrap id="tI-or-38-01-0402" position="float">
<label>Table I.</label>
<caption><p>Clinicopathological characteristics of the study cohort.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="bottom">Characteristics</th>
<th align="center" valign="bottom">Data</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">NSCLC patients, n (&#x0025;)</td>
<td align="center" valign="top">39 (100)</td>
</tr>
<tr>
<td align="left" valign="top" colspan="2">Age (years)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Median (range)</td>
<td align="center" valign="top">62 (41&#x2013;79)</td>
</tr>
<tr>
<td align="left" valign="top" colspan="2">Sex, n (&#x0025;)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Male</td>
<td align="center" valign="top">22 (56.4)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Female</td>
<td align="center" valign="top">17 (43.6)</td>
</tr>
<tr>
<td align="left" valign="top" colspan="2">Pathological TNM stage, n (&#x0025;)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;I</td>
<td align="center" valign="top">22 (56.4)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;II</td>
<td align="center" valign="top">9 (23.1)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;IIIA</td>
<td align="center" valign="top">8 (20.5)</td>
</tr>
<tr>
<td align="left" valign="top" colspan="2">Tumor size (cm)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Median (range)</td>
<td align="center" valign="top">5.0 (2.3&#x2013;16.0)</td>
</tr>
<tr>
<td align="left" valign="top" colspan="2">Nodal invasion, n (&#x0025;)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;N<sub>0</sub></td>
<td align="center" valign="top">28 (71.8)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;N<sub>1</sub></td>
<td align="center" valign="top">5 (12.8)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;N<sub>2</sub></td>
<td align="center" valign="top">6 (15.4)</td>
</tr>
<tr>
<td align="left" valign="top" colspan="2">Histologic subtype, n (&#x0025;)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Squamous cell carcinoma</td>
<td align="center" valign="top">15 (38.5)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Adenocarcinoma</td>
<td align="center" valign="top">24 (61.5)</td>
</tr>
<tr>
<td align="left" valign="top" colspan="2">Tumor grade, n (&#x0025;)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Well-differentiated</td>
<td align="center" valign="top">4 (10.3)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Moderately differentiated</td>
<td align="center" valign="top">25 (64.1)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Poorly differentiated</td>
<td align="center" valign="top">8 (20.5)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Missing</td>
<td align="center" valign="top">2 (5.1)</td>
</tr>
<tr>
<td align="left" valign="top">Adjuvant therapy, n (&#x0025;)</td>
<td align="center" valign="top">15 (38.5)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Chemotherapy</td>
<td align="center" valign="top">4 (10.2)</td>
</tr>
<tr>
<td align="left" valign="top" colspan="2">&#x00A0;&#x00A0;Radiotherapy</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;No</td>
<td align="center" valign="top">20 (51.3)</td>
</tr>
<tr>
<td align="left" valign="top" colspan="2">Smoking status, n (&#x0025;)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Smoker</td>
<td align="center" valign="top">21 (53.8)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Former-smoker</td>
<td align="center" valign="top">15 (38.5)</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Never-smoker</td>
<td align="center" valign="top">3 (7.7)</td>
</tr>
<tr>
<td align="left" valign="top">Median follow-up (months)</td>
<td align="center" valign="top">63</td>
</tr>
<tr>
<td align="left" valign="top">Recurrence, n (&#x0025;)</td>
<td align="center" valign="top">19 (48.7)</td>
</tr>
<tr>
<td align="left" valign="top">Deaths, n (&#x0025;)</td>
<td align="center" valign="top">16 (41.0)</td>
</tr>
<tr>
<td align="left" valign="top">Missing, n (&#x0025;)</td>
<td align="center" valign="top">4 (10.3)</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="tfn1-or-38-01-0402"><p>NSCLC, non-small cell lung cancer; TNM, tumor-node-metastasis.</p></fn>
</table-wrap-foot>
</table-wrap>
<table-wrap id="tII-or-38-01-0402" position="float">
<label>Table II.</label>
<caption><p>Correlation between XAF1 protein losses and mutational status of the <italic>TP53</italic> gene in NSCLC tumor tissues.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th/>
<th align="center" valign="bottom" colspan="2">Loss of XAF1 protein</th>
</tr>
<tr>
<th/>
<th align="center" valign="bottom" colspan="2"><hr/></th>
</tr>
<tr>
<th align="left" valign="bottom">TP53 status</th>
<th align="center" valign="bottom">Yes</th>
<th align="center" valign="bottom">No</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">Wild-type</td>
<td align="center" valign="top">13</td>
<td align="center" valign="top">1</td>
</tr>
<tr>
<td align="left" valign="top">Mutated</td>
<td align="center" valign="top">&#x00A0;&#x00A0;3</td>
<td align="center" valign="top">4</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="tfn2-or-38-01-0402"><p>p=0.02. XAF1, XIAP-associated factor 1; NSCLC, non-small cell lung cancer.</p></fn>
</table-wrap-foot>
</table-wrap>
<table-wrap id="tIII-or-38-01-0402" position="float">
<label>Table III.</label>
<caption><p>Correlation between XAF1 mRNA losses and clinicopathological parameters in the NSCLC patients.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th/>
<th align="center" valign="bottom" colspan="2">XAF1 losses</th>
<th/>
</tr>
<tr>
<th/>
<th align="center" valign="bottom" colspan="2"><hr/></th>
<th/>
</tr>
<tr>
<th align="left" valign="bottom">Clinicopathological characteristics</th>
<th align="center" valign="bottom">Yes, n (&#x0025;)</th>
<th align="center" valign="bottom">No, n (&#x0025;)</th>
<th align="center" valign="bottom">P-value</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="top">Age (years)</td>
<td/>
<td/>
<td align="center" valign="top">0.01<sup><xref rid="tfn4-or-38-01-0402" ref-type="table-fn">a</xref></sup></td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;&#x2264;60</td>
<td align="center" valign="top">14 (93.3)</td>
<td align="center" valign="top">1 (6.7)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;&#x003E;60</td>
<td align="center" valign="top">11 (45.8)</td>
<td align="center" valign="top">13 (54.2)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">Sex</td>
<td/>
<td/>
<td align="center" valign="top">0.19</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Male</td>
<td align="center" valign="top">12 (54.5)</td>
<td align="center" valign="top">10 (45.5)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Female</td>
<td align="center" valign="top">13 (76.5)</td>
<td align="center" valign="top">4 (23.5)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">Smoking status</td>
<td/>
<td/>
<td align="center" valign="top">0.05<sup><xref rid="tfn4-or-38-01-0402" ref-type="table-fn">a</xref></sup></td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Never-smoker</td>
<td align="center" valign="top">0 (0)</td>
<td align="center" valign="top">3 (100)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Former-smoker</td>
<td align="center" valign="top">11 (73.3)</td>
<td align="center" valign="top">4 (26.7)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Smoker</td>
<td align="center" valign="top">14 (66.7)</td>
<td align="center" valign="top">7 (33.3)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">Pathological TNM stage</td>
<td/>
<td/>
<td align="center" valign="top">0.48</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;I</td>
<td align="center" valign="top">14 (63.6)</td>
<td align="center" valign="top">8 (38.1)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;II</td>
<td align="center" valign="top">6 (66.7)</td>
<td align="center" valign="top">3 (33.3)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;III</td>
<td align="center" valign="top">6 (75.0)</td>
<td align="center" valign="top">2 (25)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">Tumor size (cm)</td>
<td/>
<td/>
<td align="center" valign="top">0.80</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;&#x2264;5</td>
<td align="center" valign="top">14 (63.6)</td>
<td align="center" valign="top">8 (36.4)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;&#x003E;5</td>
<td align="center" valign="top">11 (73.3)</td>
<td align="center" valign="top">6 (26.7)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">Nodal invation</td>
<td/>
<td/>
<td align="center" valign="top">0.42</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Positive</td>
<td align="center" valign="top">8 (72.7)</td>
<td align="center" valign="top">3 (27.3)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Negative</td>
<td align="center" valign="top">18 (64.3)</td>
<td align="center" valign="top">10 (35.7)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">Histological subtype</td>
<td/>
<td/>
<td align="center" valign="top">0.49</td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Squamous cell</td>
<td align="center" valign="top">10 (66.7)</td>
<td align="center" valign="top">5 (33.3)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Adenocarcinoma (differentiated)</td>
<td align="center" valign="top">14 (58.3)</td>
<td align="center" valign="top">10 (41.7)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">Tumor grade</td>
<td/>
<td/>
<td align="center" valign="top">0.01<sup><xref rid="tfn4-or-38-01-0402" ref-type="table-fn">a</xref></sup></td>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Well</td>
<td align="center" valign="top">0 (0)</td>
<td align="center" valign="top">4 (100)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Moderate</td>
<td align="center" valign="top">19 (76)</td>
<td align="center" valign="top">&#x00A0;&#x00A0;6 (24)</td>
<td/>
</tr>
<tr>
<td align="left" valign="top">&#x00A0;&#x00A0;Poor</td>
<td align="center" valign="top">5 (62.5)</td>
<td align="center" valign="top">3 (37.5)</td>
<td/>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="tfn3-or-38-01-0402"><p>XAF1, XIAP-associated factor 1; NSCLC, non-small cell lung cancer; TNM, tumor-node-metastasis.</p></fn>
<fn id="tfn4-or-38-01-0402"><label>a</label><p>Statistically significant.</p></fn>
</table-wrap-foot>
</table-wrap>
</floats-group>
</article>