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<?release-delay 0|0?>
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">OL</journal-id>
<journal-title-group>
<journal-title>Oncology Letters</journal-title>
</journal-title-group>
<issn pub-type="ppub">1792-1074</issn>
<issn pub-type="epub">1792-1082</issn>
<publisher>
<publisher-name>D.A. Spandidos</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3892/ol.2020.12125</article-id>
<article-id pub-id-type="publisher-id">OL-0-0-12125</article-id>
<article-categories>
<subj-group>
<subject>Articles</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>LINC00294 induced by GRP78 promotes cervical cancer development by promoting cell cycle transition</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author"><name><surname>Qiu</surname><given-names>Jiangnan</given-names></name>
<xref rid="af1-ol-0-0-12125" ref-type="aff"/>
<xref rid="fn1-ol-0-0-12125" ref-type="author-notes">&#x002A;</xref></contrib>
<contrib contrib-type="author"><name><surname>Zhou</surname><given-names>Shulin</given-names></name>
<xref rid="af1-ol-0-0-12125" ref-type="aff"/>
<xref rid="fn1-ol-0-0-12125" ref-type="author-notes">&#x002A;</xref></contrib>
<contrib contrib-type="author"><name><surname>Cheng</surname><given-names>Wenjun</given-names></name>
<xref rid="af1-ol-0-0-12125" ref-type="aff"/>
<xref rid="c1-ol-0-0-12125" ref-type="corresp"/></contrib>
<contrib contrib-type="author"><name><surname>Luo</surname><given-names>Chengyan</given-names></name>
<xref rid="af1-ol-0-0-12125" ref-type="aff"/>
<xref rid="c1-ol-0-0-12125" ref-type="corresp"/></contrib>
</contrib-group>
<aff id="af1-ol-0-0-12125">Department of Gynecology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu 210000, P.R. China</aff>
<author-notes>
<corresp id="c1-ol-0-0-12125"><italic>Correspondence to</italic>: Dr Wenjun Cheng or Dr Chengyan Luo, Department of Gynecology, The First Affiliated Hospital of Nanjing Medical University, 300 Guangzhoulu, Nanjing, Jiangsu 210000, P.R. China, E-mail: <email>wenjunchengdoc@163.com</email>, E-mail: <email>lcywei0209@163.com</email></corresp>
<fn id="fn1-ol-0-0-12125"><label>&#x002A;</label><p>Contributed equally</p></fn>
</author-notes>
<pub-date pub-type="ppub">
<month>11</month>
<year>2020</year></pub-date>
<pub-date pub-type="epub">
<day>21</day>
<month>09</month>
<year>2020</year></pub-date>
<volume>20</volume>
<issue>5</issue>
<elocation-id>262</elocation-id>
<history>
<date date-type="received"><day>24</day><month>05</month><year>2018</year></date>
<date date-type="accepted"><day>27</day><month>05</month><year>2020</year></date>
</history>
<permissions>
<copyright-statement>Copyright: &#x00A9; Qiu et al.</copyright-statement>
<copyright-year>2020</copyright-year>
<license license-type="open-access">
<license-p>This is an open access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by-nc-nd/4.0/">Creative Commons Attribution-NonCommercial-NoDerivs License</ext-link>, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.</license-p></license>
</permissions>
<abstract>
<p>Cervical cancer is one of the most common gynecological malignancies, and it has become a crucial public health problem. In the present study, the expression profiles of cervical cancer and normal cervical tissues were downloaded from the Gene Expression Omnibus and The Cancer Genome Atlas databases. Subsequently, the dysregulated long non-coding RNAs (lncRNAs) in cervical cancer were identified using R software Differentially expressed lncRNAs in cervical cancer that were associated with glucose-regulated protein 78 (GRP78) were screened out and the results demonstrated that eight lncRNAs were strongly positively correlated with GRP78. In order to confirm the relationship between GRP78 and candidate lncRNAs, GRP78 small interfering RNA (siRNA) was transfected into HeLa cells. The target lncRNAs that were regulated by GRP78 were then identified by reverse transcription-quantitative PCR and it was revealed that LINC00294 was significantly downregulated following GRP78-knockdown. Subsequently, Gene Set Enrichment Analysis demonstrated that LINC00294 was mainly enriched in regulating the cell cycle and the Hedgehog pathway. Following transfection of HeLa and SiHa cells with LINC00294 siRNA, the cell cycle was arrested at the G0/G1 phase. Western blotting suggested that LINC00294-knockdown downregulated the expression of cell cycle-associated factors (cyclin D, cyclin E and cyclin Dependent kinase 4) and upregulated cell cycle inhibitory factors (p16 and p21). The Hedgehog pathway was inhibited following knockdown of LINC00294 in HeLa and SiHa cells. In summary, LINC00294 induced by GRP78 promoted the progression of cervical cancer by regulating the cell cycle via Hedgehog pathway.</p>
</abstract>
<kwd-group>
<kwd>cervical cancer</kwd>
<kwd>glucose-regulated protein 78</kwd>
<kwd>LINC00294</kwd>
<kwd>cell cycle</kwd>
<kwd>Hedgehog pathway</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<sec sec-type="intro">
<title>Introduction</title>
<p>Cervical cancer is one of the most common gynecological malignancies, and it has become a crucial public health problem (<xref rid="b1-ol-0-0-12125" ref-type="bibr">1</xref>). Globally, the incidence of cervical cancer ranks second among all female malignant tumors (<xref rid="b2-ol-0-0-12125" ref-type="bibr">2</xref>). At present, surgery, chemotherapy and radiotherapy are the preferred treatments for cervical cancer. However, chemotherapy drugs cannot achieve a good therapeutic effect in cervical cancer due to drug resistance. In addition, effective treatments for advanced and recurrent cervical cancer are lacking (<xref rid="b3-ol-0-0-12125" ref-type="bibr">3</xref>). However, targeted therapy for cervical cancer has been well recognized. Specific molecular targeted drugs for tumors have gradually been identified, such as drugs that target signal transduction, cell receptors and angiogenesis (<xref rid="b4-ol-0-0-12125" ref-type="bibr">4</xref>,<xref rid="b5-ol-0-0-12125" ref-type="bibr">5</xref>). To the best of our knowledge, the exact mechanism of cervical cancer development is rarely studied, which greatly limits the investigation of molecular targeted drug therapy. Therefore, it is necessary to further study the molecular mechanism of cervical cancer development.</p>
<p>With the progress of human genome sequencing technology, &#x003E;98&#x0025; of sequences in the human genome are found to be non-coding RNAs (<xref rid="b6-ol-0-0-12125" ref-type="bibr">6</xref>) Non-coding RNAs are classified into short and long non-coding RNAs (lncRNAs) based on their sequence lengths (<xref rid="b7-ol-0-0-12125" ref-type="bibr">7</xref>). lncRNAs are &#x003E;200 nucleotides in length and their structure is similar to mRNAs (<xref rid="b8-ol-0-0-12125" ref-type="bibr">8</xref>,<xref rid="b9-ol-0-0-12125" ref-type="bibr">9</xref>). lncRNA is ubiquitous in eukaryotes, however its sequence is poorly conserved among different species (<xref rid="b10-ol-0-0-12125" ref-type="bibr">10</xref>). lncRNAs can form complex secondary structures that provide space for binding to multiple nucleic acids or proteins (<xref rid="b11-ol-0-0-12125" ref-type="bibr">11</xref>). Functionally, lncRNA regulates gene expression at the transcriptional and post-transcriptional level (<xref rid="b12-ol-0-0-12125" ref-type="bibr">12</xref>). lncRNAs are also involved in a variety of cellular activities, such as signaling pathway regulation, gene expression regulation, protein folding and cell activity (<xref rid="b13-ol-0-0-12125" ref-type="bibr">13</xref>). Studies have also reported that lncRNAs are closely associated various tumors, such as colorectal cancer and breast cancer (<xref rid="b14-ol-0-0-12125" ref-type="bibr">14</xref>&#x2013;<xref rid="b16-ol-0-0-12125" ref-type="bibr">16</xref>).</p>
<p>Glucose-regulated protein 78 (GRP78) is a multifunctional protein that is mainly distributed in the endoplasmic reticulum (<xref rid="b17-ol-0-0-12125" ref-type="bibr">17</xref>). GRP78 acts as a molecular chaperone that controls protein folding and assembly, prevents protein aggregation and regulates the endoplasmic reticulum unfolded protein response pathway (<xref rid="b18-ol-0-0-12125" ref-type="bibr">18</xref>). As an essential stress sensor, GRP78 expression is altered by various factors in the tumor microenvironment, such as hypoxia, glucose and nutrient deficiency, acidosis, and inflammatory responses (<xref rid="b19-ol-0-0-12125" ref-type="bibr">19</xref>). A number of studies have shown that GRP78 overexpression promotes proliferation, migration, invasion and anti-apoptosis of cancer cells (<xref rid="b20-ol-0-0-12125" ref-type="bibr">20</xref>,<xref rid="b21-ol-0-0-12125" ref-type="bibr">21</xref>). GRP78-specific antibody is capable of inhibiting tumor growth and metastasis by neutralizing GRP78 protein level (<xref rid="b22-ol-0-0-12125" ref-type="bibr">22</xref>). Our previous studies demonstrated that GRP78 is upregulated in cervical cancer, and GRP78-knockdown could increase the sensitivity of chemotherapy drugs and improve the cisplatin-induced apoptosis of cervical cancer cells (<xref rid="b23-ol-0-0-12125" ref-type="bibr">23</xref>,<xref rid="b24-ol-0-0-12125" ref-type="bibr">24</xref>).</p>
<p>In the present study, The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases were used to screen target lncRNAs that were associated with GRP78 in cervical cancer. Subsequent experiments were performed to investigate the underlying mechanism.</p>
</sec>
<sec sec-type="materials|methods">
<title>Materials and methods</title>
<sec>
<title/>
<sec>
<title>Data collection</title>
<p>Two cervical cancer expression microarrays GSE26511 (<uri xlink:href="https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=gse26511">https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=gse26511</uri>) and GSE5787 (<uri xlink:href="https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi">https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi</uri>) were downloaded from the GEO database. The GSE26511 microarray contains 20 cases of cervical cancer without lymph node metastasis and 19 cases of cervical cancer with lymph node metastasis (<xref rid="b25-ol-0-0-12125" ref-type="bibr">25</xref>). GSE5787 contain 30 tumor samples from 11 patients with cervical cancer (<xref rid="b26-ol-0-0-12125" ref-type="bibr">26</xref>). TCGA <uri xlink:href="http://cancergenome.nih.gov/">http://cancergenome.nih.gov/</uri>) contained gene expression profile data of cervical cancer. All data from TCGA were downloaded in December 2017, and consisted of data for a total of 306 cervical cancer samples.</p>
</sec>
<sec>
<title>Data processing</title>
<p>Correlation analysis was performed between GRP78 and lncRNAs extracted from GSE5787, GSE26511 and TCGA with the Cor R package by R software. The top 200 lncRNAs with positive and negative correlation with GRP78 in GSE26511, GSE5787 and TCGA were extracted and analyzed in a Venn diagram (<uri xlink:href="https://bioinfogp.cnb.csic.es/tools/venny/">https://bioinfogp.cnb.csic.es/tools/venny/</uri>). Gene Set Enrichment Analysis (GSEA) was conducted using GSEA 2.2.1 software (<xref rid="b27-ol-0-0-12125" ref-type="bibr">27</xref>,<xref rid="b28-ol-0-0-12125" ref-type="bibr">28</xref>). The downloaded expression profile, phenotype data and MsigDB microarray platform file were uploaded into the GSEA program. Enrichment analysis was performed according to the default weighted enrichment statistics method.</p>
</sec>
<sec>
<title>Cell culture and transfection</title>
<p>Human cervical cancer cell lines HeLa and SiHa were obtained from American Type Culture Collection. HeLa and SiHa cells were cultured in Dulbecco&#x0027;s modified Eagle&#x0027;s medium (Hyclone; Cytiva) containing 10&#x0025; fetal bovine serum (Hyclone; Cytiva), 100 U/ml penicillin and 100 &#x00B5;g/ml streptomycin (Hyclone; Cytiva). Cells were incubated in a 5&#x0025; CO<sub>2</sub> incubator at 37&#x00B0;C.</p>
<p>For transfection, HeLa were seeded in the 6-well plates, and when the confluence was 60&#x2013;80&#x0025;, the cells were transfected with 50 nM small interfering RNAs (siRNAs and si-NC used as control) using Lipofectamine 2000 (Invitrogen; Thermo Fisher Scientific, Inc.) according to the manufacturer&#x0027;s protocol. The culture medium was replaced 6 h later. After 24 h, the transfected cells were harvested for subsequent experiments. The sequences of siRNA used were as follows: si-negative control (NC) sense, 5&#x2032;-UUCUCCGAACGUGUCACGUTT-3&#x2032; and antisense, 5&#x2032;-ACGUGACACGUUCGGAGAATT-3&#x2032;; si-GRP78 sense, 5&#x2032;-GGAGCGCAUUGAUACUAGATT-3&#x2032; and antisense, 5&#x2032;-UCUAGUAUCAAUGCGCUCCTT-3&#x2032;; si-LINC00294-1 sense, 5&#x2032;-CCACAAAGUUAUCAGGAAATT-3&#x2032; and antisense, 5&#x2032;-UUUCCUGAUAACUUUGUGGTT-3&#x2032;; si-LINC00294-2 sense, 5&#x2032;-CCUGGAAUCUCAUAGGAUUTT-3&#x2032; and antisense, 5&#x2032;-AAUCCUAUGAGAUUCCAGGTT-3&#x2032;; and si-LINC00294-3 sense, 5&#x2032;-GCGAACAUGUAACCCUCUATT-3&#x2032; and antisense, 5&#x2032;-UAGAGGGUUACAUGUUCGCTT-3&#x2032;.</p>
</sec>
<sec>
<title>RNA extraction and reverse transcription-quantitative PCR (RT-qPCR)</title>
<p>Total RNA was extracted from transfected cells using TRIzol (Invitrogen; Thermo Fisher Scientific, Inc.) and reversed transcribed using PrimeScript RT Master mix (Takara Bio, Inc.) according to the manufacturer&#x0027;s protocol. RNA concentration was detected using a spectrometer and samples with an A260/A280 ratio of 1.8&#x2013;2.0 were selected for the following qPCR reaction. qPCR was then performed using SYBR<sup>&#x00AE;</sup> Green Master mix (Takara Bio, Inc.), according to the manufacturer&#x0027;s protocol. RT-qPCR was carried out at 94&#x00B0;C for 5 min and 40 cycles at 94&#x00B0;C for 30 sec, 55&#x00B0;C for 30 sec and 72&#x00B0;C for 90 sec following the protocol of SYBR Premix Ex Taq&#x2122; (Takara). The primers used for qPCR were as follows: GAPDH forward, 5&#x2032;-CACCCACTCCTCCACCTTTG-3&#x2032; and reverse, 5&#x2032;-CCACCACCCTGTTGCTGTAG-3&#x2032;; HLA complex 5 forward, 5&#x2032;-CTGTGGATGACATGGCCTTA-3&#x2032; and reverse, 5&#x2032;-GATGCCAGCTTTGAGTGGA-3&#x2032;; HOXA transcript antisense RNA (HOTAIR), myeloid specific 1 forward, 5&#x2032;-AGTGCTGGAGCGAAGAAGAG-3&#x2032; and reverse, 5&#x2032;-CCTCTCGCCAGTTCATCTTT-3&#x2032;; HOXA11 antisense RNA forward, 5&#x2032;-CGGCTAACAAGGAGATTTGG-3&#x2032; and reverse, 5&#x2032;-GCAAAGGCTGTGGAAAGAAG-3&#x2032;; LINC00162 forward, 5&#x2032;-CTCAGAAACACCCACCATGC-3&#x2032; and reverse, 5&#x2032;-GAAAGTCCAGGCAGTTCAGC-3&#x2032;; LINC00294 forward, 5&#x2032;-TGTGTTGTCCTCCAGAATCG-3&#x2032; and reverse, 5&#x2032;-CCAACCAAGAGCCAACAAAG-3&#x2032;; LINC00888 forward, 5&#x2032;-TTGGCCCTTGAAAGAATCAG-3&#x2032; and reverse, 5&#x2032;-ACTGGCATTTCCTCCACTGT-3&#x2032;; ST3GAL4 antisense RNA 1 forward, 5&#x2032;-ACCTTCCTGCTGTCCTTCCT-3&#x2032; and reverse, 5&#x2032;-CCCTCAGAGCCTTGATGTCT-3&#x2032;; TOPORS antisense RNA 1 forward, 5&#x2032;-CTCTCACCTCCTGTTGTACGC-3&#x2032; and reverse, 5&#x2032;-CGTGGTCTGTTTAGGGAGGA-3&#x2032;; P16 forward, 5&#x2032;-TTATTTGAGCTTTGGTTCTG-3&#x2032; and reverse, 5&#x2032;-CCGGCTTTCGTAGTTTTCAT-3&#x2032;; P21 forward, 5&#x2032;-GAGTCTCCAGGTCCACCTGG-3&#x2032; and reverse, 5&#x2032;-CGTGGTCTGTTTAGGGAGGA-3&#x2032;; cyclin D forward, 5&#x2032;-ATGTTCGTGGCCTCTAAGATGA-3&#x2032; and reverse, 5&#x2032;-CAGGTTCCACTTGAGCTTGTTC-3&#x2032;; cyclin E forward, 5&#x2032;-GTTATAAGGGAGACGGGGAG-3&#x2032;, and reverse, 5&#x2032;-TGCTCTGCTTCTTACCGCTC-3&#x2032;; and cyclin-dependent kinase 4 (CDK4) forward, 5&#x2032;-CATGTAGACCAGGACCTAAGG-3&#x2032;, and reverse, 5&#x2032;-AACTGGCGCATCAGATCCTAG-3&#x2032;. Relative gene expression was analyzed using 2<sup>&#x2212;&#x0394;&#x0394;Ct</sup> method (<xref rid="b29-ol-0-0-12125" ref-type="bibr">29</xref>).</p>
</sec>
<sec>
<title>Cell cycle detection</title>
<p>HeLa and SiHa cells were digested with trypsin (Gibco; Thermo Fisher Scientific, Inc.) and prepared into a cell suspension. After cells were washed with Hanks buffer (Gibco; Thermo Fisher Scientific, Inc.), cells were centrifuged at 1,000 &#x00D7; g for 5 min at room temperature. Cells were then resuspended and incubated with pre-cooled 70&#x0025; ethanol overnight. Finally, cells were stained with propidium iodide (30 &#x00B5;g/ml) for 30 min at room temperature (Beyotime Institute of Biotechnology), followed by cell cycle detection using a flow cytometer (BD LSRFFortessa; BD Biosciences). The results were analyzed using FlowJo software (version 10.6.2; BD Biosciences).</p>
</sec>
<sec>
<title>Western blotting</title>
<p>Total protein was extracted from treated cells using RIPA solution at 4&#x00B0;C (Beyotime Institute of Biotechnology) and the protein concentration was quantified using BCA kit (Beyotime Institute of Biotechnology). Protein samples (60 &#x00B5;g) were separated by 10&#x0025; SDS gel with electrophoresis and transferred to a PVDF membrane. Membranes were blocked with 5&#x0025; skimmed milk for 1 h at room temperature, followed by incubation with the primary antibodies against GRP78 (1:1,000; cat. no. 3177T), p16 (1:1,000; cat. no. 80772), p21 (1:1,000; cat. no. 2947), Cyclin D (1:1,000; cat. no. 55506), Cyclin E (1:1,000; cat. no. 4129), CDK4 (1:1,000; cat. no. 12790), Gli1 (1:1,000; cat. no. 3538T), Sonic (1:1,000; cat. no. 2207T) and GAPDH (1:1,000; cat. no. 5174T; Cell Signaling Technology, Inc.) overnight at 4&#x00B0;C. Subsequently, the membranes were incubated with anti-rabbit IgG HRP-linked antibody (1:1,000; cat. no. 7074; Cell Signaling Technology, Inc.) at room temperature for 1 h. The protein blots on the membrane were exposed by chemiluminescence reagent (Thermo Fisher Scientific, Inc.). Relative expression levels were normalized to endogenous control GAPDH using Image J software (1.52a; National Institutes of Health).</p>
</sec>
<sec>
<title>Statistical analysis</title>
<p>All experiments were performed in triplicate. SPSS 20.0 statistical software (IBM Corp.) was used for statistical analysis, and GraphPad 5.0 (GraphPad Software, Inc.) was used to generate figures. Quantitative data are expressed as mean &#x00B1; standard deviation. Comparisons among multiple groups were performed by one-way analysis of variance. Comparisons among four groups were analyzed by one-way analysis of variance followed by Tukey&#x0027;s post hoc test. P&#x003C;0.05 was considered to indicate a statistically significant difference.</p>
</sec>
</sec>
</sec>
<sec sec-type="results">
<title>Results</title>
<sec>
<title/>
<sec>
<title>GRP78 regulates LINC00294 expression</title>
<p>Cervical cancer gene expression profile data were downloaded from GEO and TCGA databases. Specifically, GSE26511 contained 39 cervical cancer samples, GSE5787 contained 30 cervical cancer samples and TCGA contained 306 cervical cancer samples. Subsequently, correlation analysis between the identified lncRNAs and GRP78 was performed, the top 200 lncRNAs that were positively correlated with GRP78 and the top 200 lncRNAs that were negatively correlated with GRP78 were selected. The overlapping lncRNAs that were positively correlated with GRP78 in the GSE26511, GSE5787 and TCGA datasets were obtained from the Venn diagram. A total of eight overlapping lncRNAs were finally screened out to be positively correlated with GRP78 (<xref rid="f1-ol-0-0-12125" ref-type="fig">Fig. 1A</xref>). Whereas, only one lncRNA was negatively correlated with GRP78 in all datasets (<xref rid="f1-ol-0-0-12125" ref-type="fig">Fig. 1B</xref>). These eight positively corrected lncRNAs (LINC00294, HCP5, HOTAIRM1, HOXA11-AS, LINC00162, LINC00888) were selected for the following experiments.</p>
<p>For the following experiments, si-GRP78 was transfected into HeLa cells and the expression levels of the eight positively correlated lncRNAs were detected. Western blotting was used to confirm that GRP78 was successfully reduced in HeLa cells transfected with si-GRP78 compared with cells transfected with the si-NC (<xref rid="f1-ol-0-0-12125" ref-type="fig">Fig. 1C</xref>). Subsequently, the eight positively corrected lncRNAs were confirmed by RT-qPCR following GRP78 knockdown. The results demonstrated that only LINC00294 was downregulated following GRP78-knockdown in HeLa cells (<xref rid="f1-ol-0-0-12125" ref-type="fig">Fig. 1D</xref>). Subsequently, GSEA was performed to predict the biological processes that LINC00294 is associated with. The results demonstrated that the LINC00294 is associated with the cell cycle (<xref rid="f1-ol-0-0-12125" ref-type="fig">Fig. 1E</xref>) and Hedgehog signaling pathway (<xref rid="f1-ol-0-0-12125" ref-type="fig">Fig. 1F</xref>). These results indicated that LINC00294 may participate in cervical cancer development via GRP78.</p>
</sec>
<sec>
<title>LINC00294-knockdown arrests the cell cycle of cervical cancer cells</title>
<p>To investigate whether LINC00294 can regulate the cell cycle of HeLa and SiHa cells, three siRNA sequences targeting LINC00294 were transfected into the cells. It was identified that si-LINC00294-1 and si-LINC00294-2 significantly reduced the mRNA level of LINC00294, whereas the efficacy of si-LINC00294-3 was insignificant (<xref rid="f2-ol-0-0-12125" ref-type="fig">Fig. 2A</xref>). Following transfection of HeLa and SiHa cells with si-LINC00294-1 and si-LINC00294-2, the percentage of cells in the G0/G1 phase was significantly increased, whereas the percentages of cells in the S and G2/M phases were significantly decreased (<xref rid="f2-ol-0-0-12125" ref-type="fig">Fig. 2B-D</xref>). These results demonstrated that LINC00294-knockdown arrests the cell cycle at the G0/G1 phase, thereby inhibiting the proliferative ability of cervical cancer cells.</p>
</sec>
<sec>
<title>LINC00294 regulates the cell cycle of cervical cancer cells via the Hedgehog pathway</title>
<p>Expression levels of cell cycle-related genes were detected by RT-qPCR and western blotting. The results indicated that following LINC00294-knockdown in HeLa and SiHa cells the mRNA levels of p16 and p21 were significantly increased compared with the control cells, whereas the mRNA levels of cyclin D, cyclin E and CDK4 were significantly decreased (<xref rid="f3-ol-0-0-12125" ref-type="fig">Fig. 3A</xref>). Similar results were obtained by western blotting (<xref rid="f3-ol-0-0-12125" ref-type="fig">Fig. 3B and C</xref>). Based on GSEA data, the Hedgehog pathway was predicted to be involved in cervical cancer development. Therefore, key genes in Hedgehog pathway were detected by western blotting. Protein expression levels of Sonic and Gli1 were significantly decreased following transfection with si-LINC00294 (<xref rid="f3-ol-0-0-12125" ref-type="fig">Fig. 3D and E</xref>), indicating a role of the Hedgehog pathway in regulating the cell cycle of cervical cancer cells.</p>
</sec>
</sec>
</sec>
<sec sec-type="discussion">
<title>Discussion</title>
<p>Cervical cancer is one of the most common types of malignant tumor in women, and it is a continuous process from a benign lesion, cervical intraepithelial neoplasia, carcinoma <italic>in situ</italic> and invasive carcinoma (<xref rid="b30-ol-0-0-12125" ref-type="bibr">30</xref>). Therefore, early detection and treatment are essential to reduce the morbidity and mortality of cervical cancer (<xref rid="b31-ol-0-0-12125" ref-type="bibr">31</xref>). Whole genome sequencing results have demonstrated that the majority of the stably transcribed RNAs are non-coding RNAs (<xref rid="b32-ol-0-0-12125" ref-type="bibr">32</xref>). Among them, lncRNAs possess functions in multiple cellular processes, including cell proliferation, differentiation and metabolism (<xref rid="b33-ol-0-0-12125" ref-type="bibr">33</xref>). lncRNAs are involved in various diseases, such as tumors, diabetes and immune diseases (<xref rid="b34-ol-0-0-12125" ref-type="bibr">34</xref>,<xref rid="b35-ol-0-0-12125" ref-type="bibr">35</xref>). For example, overexpressed HOTAIR in cervical cancer is associated with lymph node metastasis, survival rate and postoperative recurrence (<xref rid="b36-ol-0-0-12125" ref-type="bibr">36</xref>). Maternally expressed 3 is downregulated in cervical cancer tissues, which promotes proliferation of cervical cancer (<xref rid="b37-ol-0-0-12125" ref-type="bibr">37</xref>). In addition, decreased expression of lncRNA growth arrest specific 5 can serve as an unfavorable prognostic factor for cervical cancer (<xref rid="b38-ol-0-0-12125" ref-type="bibr">38</xref>). Our previous study demonstrated that GRP78 is upregulated in cervical cancer tissues compared with paracancerous tissues. In the present study, LINC00294 was identified to be positively associated with GRP78 in. <italic>In vitro</italic> experiments demonstrated that LINC00294 may regulate the cell cycle of cervical cancer cells via the Hedgehog pathway.</p>
<p>Cell cycle disorder is one of the main causes of tumorigenesis (<xref rid="b39-ol-0-0-12125" ref-type="bibr">39</xref>). Under normal circumstances, the cell cycle transitions between the G1, S, G2 and M phases via precise regulation by the cell cycle molecular network system of cyclins, CDKs and cyclin-depending kinase inhibitors (CKIs) (<xref rid="b40-ol-0-0-12125" ref-type="bibr">40</xref>). Specifically, cyclin D1, cyclin E, CDK4, p16 and p21 are key factors that regulate the cell cycle (<xref rid="b39-ol-0-0-12125" ref-type="bibr">39</xref>,<xref rid="b40-ol-0-0-12125" ref-type="bibr">40</xref>). At different phases of the cell cycle, cyclins bind to the corresponding CDKs to form cyclin/CDK complexes, which activate CDKs and promote cell cycle transformation. However, CDKs or cyclin/CDK complexes also inhibit CDK activities via binding to the corresponding CKIs, thereby inhibiting the transition of the cell cycle (<xref rid="b39-ol-0-0-12125" ref-type="bibr">39</xref>,<xref rid="b40-ol-0-0-12125" ref-type="bibr">40</xref>). The present study demonstrated that LINC00294-knockdown in cervical cancer significantly arrests cell cycle in G0/G1 phase, thereby inhibiting cell cycle progression and cell proliferation. Western blotting demonstrated that LINC00294-knockdown downregulated cyclin D, cyclin E and CDK4, whereas it upregulated p16 and p21 in HeLa and SiHa cells.</p>
<p>The Hedgehog gene was first discovered in <italic>drosophila</italic> in 1980 (<xref rid="b41-ol-0-0-12125" ref-type="bibr">41</xref>). Previous studies have reported that the Hedgehog pathway plays a key role in animal embryonic development, including in the formation of lungs, skin, bones, limbs, neural tube and the gastrointestinal system (<xref rid="b42-ol-0-0-12125" ref-type="bibr">42</xref>&#x2013;<xref rid="b44-ol-0-0-12125" ref-type="bibr">44</xref>). In addition, the Hedgehog pathway is involved in the regulation of cell growth, proliferation, migration and differentiation (<xref rid="b45-ol-0-0-12125" ref-type="bibr">45</xref>,<xref rid="b46-ol-0-0-12125" ref-type="bibr">46</xref>). Hedgehog is closely associated with the occurrence and progression of malignant tumors, such as basal cell carcinoma, breast cancer, prostate cancer and multiple digestive system cancers (<xref rid="b47-ol-0-0-12125" ref-type="bibr">47</xref>,<xref rid="b48-ol-0-0-12125" ref-type="bibr">48</xref>). Abnormal activation of the Hedgehog pathway results in invasion and metastasis of tumor cells (<xref rid="b49-ol-0-0-12125" ref-type="bibr">49</xref>&#x2013;<xref rid="b51-ol-0-0-12125" ref-type="bibr">51</xref>). In the present study, the Hedgehog pathway was found to be involved in the occurrence of cervical cancer. Preliminary mechanism studies demonstrated that LINC00294-knockdown inhibited the expression levels of Gli1 and Sonic, which are key genes in the Hedgehog pathway.</p>
<p>In summary, the present study first identified LINC00294 to be strongly correlated with GRP78. Subsequently, RT-qPCR demonstrated that LINC00294 was regulated by GRP78. In addition, GSEA revealed that LINC00294 was mainly enriched in mediating the cell cycle and the Hedgehog pathway. An <italic>in vitro</italic> assay confirmed that LINC00294 could regulate the cell cycle. Furthermore, western blotting demonstrated that following knockdown of LINC00294, the CKD family was significantly downregulated and CDK were inhibitors upregulated. Additionally, Hedgehog pathway-associated proteins were also expressed at lower levels following knockdown of LINC00294. The key findings of the present study were that LINC00294 was regulated by GRP78 and knockdown of LINC00294 could arrest the cell cycle at the G0/G1 phrase. However, there were some limitations of the study. In order to further confirm the regulatory relationship between GRP78 and LINC00294, whether overexpression of GRP78 can increase the expression of LINC00294 should be investigated, as well as the effects of LINC00294 on cell proliferation, invasion and migration using <italic>in vivo</italic> experiments, which will be performed in future studies. In conclusion, LINC00294 is positively correlated with and regulated by GRP78, which promotes the progression of cervical cancer through arresting the cell cycle at the G0/G1 phase via the Hedgehog pathway.</p>
</sec>
</body>
<back>
<ack>
<title>Acknowledgements</title>
<p>Not applicable.</p>
</ack>
<sec>
<title>Funding</title>
<p>This study was supported by the Jiangsu Maternal and Child Health Key Program (grant no. F2012110).</p>
</sec>
<sec>
<title>Availability of data and materials</title>
<p>The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.</p>
</sec>
<sec>
<title>Authors&#x0027; contributions</title>
<p>JQ and SZ performed the experiments and collected the data. WC analyzed the data. CL conceived and designed the experiments, and wrote the manuscript. All authors read and approved the final manuscript.</p>
</sec>
<sec>
<title>Ethics approval and consent to participate</title>
<p>Not applicable.</p>
</sec>
<sec>
<title>Patient consent for publication</title>
<p>Not applicable.</p>
</sec>
<sec>
<title>Competing interests</title>
<p>The authors declare that they have no competing interests.</p>
</sec>
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<floats-group>
<fig id="f1-ol-0-0-12125" position="float">
<label>Figure 1.</label>
<caption><p>GRP78 regulates LINC00294 expression. (A) The top 200 lncRNAs that were positively correlated with GRP78 in the GSE26511, GSE5787 and TCGA datasets. (B) The top 200 lncRNAs that were negatively correlated with GRP78 in the GSE26511, GSE5787 and TCGA datasets. (C) The GRP78 protein expression level was decreased by transfection with si-GRP78. (D) LINC00294 expression was decreased following GRP78-knockdown. (E) LINC00294 is associated with the cell cycle according to GSEA. (F) GSEA demonstrated that LINC00294 is enriched in the Hedgehog pathway. &#x002A;&#x002A;&#x002A;P&#x003C;0.001. GRP78, glucose-regulated protein 78; lncRNA, long non-coding RNA; TCGA, The Cancer Genome Atlas; si, small interfering RNA; NC, negative control; HCP5, HLA complex 5; HOTAIRM1, HOXA transcript antisense RNA, myeloid specific 1; HOXA11-AS, HOXA11 antisense; ST3GAL4-AS1, ST3GAL4 antisense RNA 1; TOPORs-AS1, TOPORS antisense RNA 1; ES, enrichment score; KEGG, Kyoto Encyclopedia of Genes and Genomes; GSEA, Gene Set Enrichment Analysis.</p></caption>
<graphic xlink:href="ol-20-05-12125-g00.tif"/>
</fig>
<fig id="f2-ol-0-0-12125" position="float">
<label>Figure 2.</label>
<caption><p>LINC00294-knockdown arrests the cell cycle at the G0/G1 phase. (A) Transfection of HeLa and SiHa cell with si-LINC00294. (B-E) The cell cycle of HeLa cells was arrested at the G0/G1 phase following LINC00294-knockdown. (F-I) Cell cycle of SiHa cells was arrested at the G0/G1 phase following LINC00294 knockdown. &#x002A;P&#x003C;0.05, &#x002A;&#x002A;P&#x003C;0.01, &#x002A;&#x002A;&#x002A;P&#x003C;0.001. si, small interfering RNA; NC, negative control; ns, not significant.</p></caption>
<graphic xlink:href="ol-20-05-12125-g01.tif"/>
</fig>
<fig id="f3-ol-0-0-12125" position="float">
<label>Figure 3.</label>
<caption><p>LINC00294 regulates the cell cycle via the Hedgehog pathway. (A) The mRNA levels of p16, p21, cyclin D, cyclin E and CDK in HeLa and SiHa cells that were transfected with si-LINC00294. The protein levels of p16, p21, cyclin D, cyclin E and CDK in (B) SiHa and (C) HeLa cells following LINC00294-knockdown. The protein levels of Sonic and Gli1 in (D) SiHa and (E) HeLa cells following LINC00294-knockdown. &#x002A;P&#x003C;0.05, &#x002A;&#x002A;P&#x003C;0.01, &#x002A;&#x002A;&#x002A;P&#x003C;0.001. si, small interfering RNA; NC, negative control; CDK4, cyclin-dependent kinase 4; Gli1, GLI family zinc finger 1.</p></caption>
<graphic xlink:href="ol-20-05-12125-g02.tif"/>
</fig>
</floats-group>
</article>
