<?xml version="1.0" encoding="utf-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "journalpublishing3.dtd">
<article xml:lang="en" article-type="research-article" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
<?release-delay 0|0?>
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">OL</journal-id>
<journal-title-group>
<journal-title>Oncology Letters</journal-title>
</journal-title-group>
<issn pub-type="ppub">1792-1074</issn>
<issn pub-type="epub">1792-1082</issn>
<publisher>
<publisher-name>D.A. Spandidos</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3892/ol.2022.13485</article-id>
<article-id pub-id-type="publisher-id">OL-24-04-13485</article-id>
<article-categories>
<subj-group>
<subject>Articles</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>KDM5B expression in cisplatin resistant neuroblastoma cell lines</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author"><name><surname>Belhajova</surname><given-names>Marie</given-names></name>
<xref rid="af1-ol-24-04-13485" ref-type="aff"/></contrib>
<contrib contrib-type="author"><name><surname>Podhorska</surname><given-names>Natalia</given-names></name>
<xref rid="af1-ol-24-04-13485" ref-type="aff"/></contrib>
<contrib contrib-type="author"><name><surname>Vicha</surname><given-names>Ales</given-names></name>
<xref rid="af1-ol-24-04-13485" ref-type="aff"/></contrib>
<contrib contrib-type="author"><name><surname>Eckschlager</surname><given-names>Tomas</given-names></name>
<xref rid="af1-ol-24-04-13485" ref-type="aff"/>
<xref rid="c1-ol-24-04-13485" ref-type="corresp"/></contrib>
</contrib-group>
<aff id="af1-ol-24-04-13485">Department of Pediatric Hematology and Oncology, 2nd Faculty of Medicine, Charles University and Motol University Hospital, 15006 Prague, Czech Republic</aff>
<author-notes>
<corresp id="c1-ol-24-04-13485"><italic>Correspondence to</italic>: Professor Tomas Eckschlager, Department of Pediatric Hematology and Oncology, 2nd Faculty of Medicine, Charles University and Motol University Hospital, V &#x00DA;valu 84, 15006 Prague 5, Czech Republic, E-mail: <email>tomas.Eckschlager@lfmotol.cuni.cz</email></corresp>
</author-notes>
<pub-date pub-type="collection">
<month>10</month>
<year>2022</year></pub-date>
<pub-date pub-type="epub">
<day>31</day>
<month>08</month>
<year>2022</year></pub-date>
<volume>24</volume>
<issue>4</issue>
<elocation-id>365</elocation-id>
<history>
<date date-type="received"><day>14</day><month>03</month><year>2022</year></date>
<date date-type="accepted"><day>21</day><month>07</month><year>2022</year></date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2022, Spandidos Publications</copyright-statement>
<copyright-year>2022</copyright-year>
</permissions>
<abstract>
<p>Chemoresistance is a major problem in successful cancer therapy. Lysine-specific demethylase 5B (KDM5B), is a member of the KDM5 family of histone demethylases, whose dysregulation has been observed in numerous types of cancer and plays a role in drug tolerance. The present study examined KDM5B expression in high risk neuroblastoma cell lines. Its level was markedly reduced in cisplatin-resistant cells, UKF-NB-4<sup>CDDP</sup>, compared with parental sensitive cells UKF-NB-4. Moreover, <italic>KDM5B</italic>-silencing did not affect either viability nor the response to CDDP in resistant cells, and led to increase of proliferation and migration in CDDP resistant cells but not in sensitive ones. Compliant with these results, short interfering KDM5B transfection resulted in increased S phase in resistant cells. Overall, these findings suggested that KDM5B may be involved in the survival mechanisms of neuroblastoma cells, which makes KDM5B a promising factor for the prediction of sensitivity to CDDP that should therefore be considered for future research.</p>
</abstract>
<kwd-group>
<kwd>neuroblastoma</kwd>
<kwd>lysine-specific demethylase 5B</kwd>
<kwd>histone methylation</kwd>
<kwd>chemoresistance</kwd>
<kwd>cisplatin</kwd>
</kwd-group>
<funding-group>
<award-group>
<funding-source>Grant Agency of Charles University, Czech Republic</funding-source>
<award-id>812217</award-id>
</award-group>
<funding-statement>This research was funded by the Grant Agency of Charles University, Czech Republic (grant no. 812217).</funding-statement>
</funding-group>
</article-meta>
</front>
<body>
<sec sec-type="intro">
<title>Introduction</title>
<p>Epigenetic mechanisms are essential for the normal development and maintenance of cell and tissue-specific gene expression patterns in mammals (<xref rid="b1-ol-24-04-13485" ref-type="bibr">1</xref>). DNA methylation, histone modification, nucleosome remodeling, and RNA-mediated targeting regulate numerous biological processes that are fundamental to the genesis of cancer. Disruption of epigenetic processes can lead to altered gene function that can induce malignant cell transformation (<xref rid="b2-ol-24-04-13485" ref-type="bibr">2</xref>). Histone methylation plays an important role in the regulation of genes expression, its dysregulation has been observed in various cancers (<xref rid="b3-ol-24-04-13485" ref-type="bibr">3</xref>&#x2013;<xref rid="b7-ol-24-04-13485" ref-type="bibr">7</xref>). Regulation of methylation is mediated by two types of enzymes-histone methyltransferases, which add methyl groups to arginine and lysine residues, and histone demethylases (lysine demethylase-KDM), which remove methyl groups (<xref rid="b3-ol-24-04-13485" ref-type="bibr">3</xref>). The KDM5 family of lysine demethylases known also as Jumonji C (JmjC) or JARID1 that have four members (KDM5A-D), demethylate di- and tri-methylated H3K4 (<xref rid="b8-ol-24-04-13485" ref-type="bibr">8</xref>). These enzymes are 2-oxoglutarate-dependent dioxygenases that require for their function Fe<sup>2&#x002B;</sup> and oxygen in order to undergo the hydroxylation necessary to remove the methyl groups (<xref rid="b8-ol-24-04-13485" ref-type="bibr">8</xref>). KDM5B, also known as JARID1B, has been found to associate with transcription factors PAX9, FOXC2 and FOXG1. It can also repress or promote activation of target genes by interacting with nuclear hormonal receptors (<xref rid="b9-ol-24-04-13485" ref-type="bibr">9</xref>). The levels of enzyme modifying histones KDM5B determine the hyperactivation of PI3K/AKT signaling in prostate cancer (<xref rid="b10-ol-24-04-13485" ref-type="bibr">10</xref>). Dysregulation of <italic>KDM5B</italic> has been identified in numerous cancers e.g. laryngeal squamous cell carcinoma, bladder, breast cancer, and is closely correlated with tumorigenesis, metastasis, and worse survival in humans (<xref rid="b5-ol-24-04-13485" ref-type="bibr">5</xref>&#x2013;<xref rid="b7-ol-24-04-13485" ref-type="bibr">7</xref>). Therefore, this enzyme might be a potential promising target for novel cancer diagnostic and/ or treatment.</p>
<p><italic>KDM5B</italic> has been described as important for the formation and maintenance of cancer stem cells in neuroblastoma cell lines (NBL) (<xref rid="b11-ol-24-04-13485" ref-type="bibr">11</xref>). In addition, its overexpression was a marker of shorter relapse-free survival in patients with NBL (<xref rid="b11-ol-24-04-13485" ref-type="bibr">11</xref>). NBL is a malignant embryonal tumor in children, emerging from the peripheral nervous system. The biology of NBL is heterogeneous; small groups of NBL regress spontaneously, while numerous cases have aggressive behavior. For high-risk neuroblastoma (HR-NBL) is characteristic development of chemoresistance (<xref rid="b12-ol-24-04-13485" ref-type="bibr">12</xref>). Patients suffering from HR-NBL have a 5-year overall survival rate of &#x007E;40&#x0025; despite all intensive multimodal therapies. To date, there are no salvage treatment regimens known to be curative (<xref rid="b12-ol-24-04-13485" ref-type="bibr">12</xref>,<xref rid="b13-ol-24-04-13485" ref-type="bibr">13</xref>). Knowledge of MYCN properties is limited because its expression is in physiological conditions limited to the early stages of embryonic development (<xref rid="b14-ol-24-04-13485" ref-type="bibr">14</xref>). N-myc protein interacts with Max and its high levels, which occurs in MYCN amplified NBL, lead to a large number of transcription-activating complexes (<xref rid="b15-ol-24-04-13485" ref-type="bibr">15</xref>). MYCN overexpression induces proliferation and suppresses apoptosis and differentiation in NBL cells (<xref rid="b16-ol-24-04-13485" ref-type="bibr">16</xref>). Several studies proved that MYCN silencing in MYCN amplified NBL cells suppressed growth and induced apoptosis and differentiation e.g. (<xref rid="b14-ol-24-04-13485" ref-type="bibr">14</xref>,<xref rid="b16-ol-24-04-13485" ref-type="bibr">16</xref>,<xref rid="b17-ol-24-04-13485" ref-type="bibr">17</xref>). Its expression was higher in MYCN amplified NBL cell lines than in MYCN-non-amplified NBL cells (<xref rid="b11-ol-24-04-13485" ref-type="bibr">11</xref>).</p>
<p>MYCN amplification correlates with poor outcome of NBL patients. Examination of MYCN amplification is part of diagnostic scheme in NBL. MYCN is MYC family of transcription factors member. Those transcription factors are regulators of cellular proliferation, differentiation and survival (<xref rid="b12-ol-24-04-13485" ref-type="bibr">12</xref>,<xref rid="b13-ol-24-04-13485" ref-type="bibr">13</xref>).</p>
<p>The aim of this study is to investigate the importance of KDM5 expression for the growth of NBL cells and their chemoresistance to cisplatin [CDDP abbreviation of cis-diaminedichloroplatinum (II)].</p>
</sec>
<sec sec-type="materials|methods">
<title>Materials and methods</title>
<sec>
<title/>
<sec>
<title>Cell culture and chemicals</title>
<p>Human HR-NBL cell lines UKF-NB-4, UKF-NB-4<sup>CDDP</sup>, SK-N-AS, SK-N-AS<sup>CDDP</sup>,UKF-NB-3 and UKF-NB-3<sup>CDDP</sup> were donated by prof. J. Cinatl, Dr. Sc. From Goethe University in Frankfurt am Main. Cells were grown in Iscove&#x0027;s Modified Dulbecco&#x0027;s medium (IMDM) supplemented with 10&#x0025; (v/v) fetal bovine serum (both Thermo Fisher Scientific) and incubated at 37&#x00B0;C in 5&#x0025; CO<sub>2</sub>. For experiments, 8&#x00D7;10<sup>5</sup> cells were seeded in 22,1 cm<sup>2</sup> dishes and after 24 h treated with cisplatin (Ebewe) in final concentration 20 &#x00B5;M for 48 h. Both cell lines amplified MYCN gene as we proved by FISH (data not shown).</p>
</sec>
<sec>
<title>Assessment of cisplatin cytotoxicity</title>
<p>To evaluate CDDP cytotoxicity, MTT (3-(4,5-dimethylthiazol-2-yl)-2.5 diphenyltetrazolium bromide) assay was performed. 10<sup>4</sup> cells/well were seeded in 96-well cell culture plate and cells were treated with CDDP at final concentration 0.6&#x2013;300 &#x00B5;M for 48 h. Subsequently, MTT solution (2 mg/ml in PBS) (Fluka) was added and the plate was placed in an incubator for 2 h. Cells were then lysed in solution of 20&#x0025; of SDS (Invitrogen) containing 50&#x0025; <italic>N</italic>,<italic>N</italic>-dimethylformamide (Sigma-Aldrich), pH 4.5, and the absorbance at 570 nm was measured by multiwell ELISA reader Versamax (Molecular Devices). The optical density of the medium was read as background and the optical density value of the live control cells was taken as 100&#x0025;. The values of IC<sub>50</sub> were determined using at least 3 independent measurements by SOFTmaxPro software.</p>
</sec>
<sec>
<title>Transfection</title>
<p>NB cells were transfected with a smart pool siRNA to KDM5B ON-TARGETplus Human KDM5B siRNA, cat. No. L-009899-00-0020 (<uri xlink:href="https://horizondiscovery.com/en/search?searchterm=L-009899-00-0020">https://horizondiscovery.com/en/search?searchterm=L-009899-00-0020</uri>) and Lincode non-targeting siRNA Lincode Non-targeting siRNA #1, cat. No. D-001320-01-20 (<uri xlink:href="https://horizondiscovery.com/en/search?searchterm=D-001320-01-20&#x002B;">https://horizondiscovery.com/en/search?searchterm=D-001320-01-20&#x002B;</uri>) using Dharmafect transfection reagent (all purchased from Dharmacon) according to the manufacturer&#x0027;s instructions. The siRNA concentration was 25 nM.</p>
</sec>
<sec>
<title>RNA isolation and quiantitative RT-PCR</title>
<p>RNA was isolated using PureLink RNA Mini Kit (Thermo Fisher Scientific) according to the manufacturer&#x0027;s protocol. Quantity and quality were verified using the NanoDrop One spectrophotometer (Thermo Fisher Scientific). Reverse transcription was performed using gb Reverse Transcription Kit (Generi Biotech) and 1,000 ng of RNA was used for complementary DNA synthesis. Primers and probes hKDM5B_Q1 and POLR2A that was used as an endogenous control (<xref rid="b18-ol-24-04-13485" ref-type="bibr">18</xref>), were designed and produced by Generi Biotech. Custom oligo synthesis, cat. No. 1000-020 for gene: KDM5B; Gene ID: 10765 POLR2A; Gene ID: 5430 (<uri xlink:href="https://www.generi-biotech.com/products/custom-oligo-synthesis/">https://www.generi-biotech.com/products/custom-oligo-synthesis/</uri>). We used POLR2A as an internal standard because it is homogeneously and uniformly expressed in NBL cells (<xref rid="b18-ol-24-04-13485" ref-type="bibr">18</xref>). It is also used by other groups studying NBL (<xref rid="b19-ol-24-04-13485" ref-type="bibr">19</xref>,<xref rid="b20-ol-24-04-13485" ref-type="bibr">20</xref>). The quantification of gene expression was performed using QuantStudio 3 Real-Time PCR System (Thermo Fisher Scientific) in triplicate. The temperature profile was: 95&#x00B0;C for 3 min, 50 cycles of 95&#x00B0;C for 10 sec, 60&#x00B0;C 20 sec. Fold change values were determined using REST 2009 software.</p>
</sec>
<sec>
<title>Western blot analysis</title>
<p>Proteins were extracted in RIPA Buffer supplemented with Complete protease inhibitor cocktail (Roche) and their concentration was measured by DC protein assay (Bio-Rad Laboratories). Samples (40 &#x00B5;g) were resolved on SDS polyacrylamide gels and blotted on nitrocellulose membranes (Bio-Rad). Primary antibody JARID1B Rabbit mAb (Cell Signaling Technology) was diluted 1:1,000, &#x03B2;-actin Mouse mAb (Sigma-Aldrich) diluted 1:3,000 was used as a loading control. Secondary antibodies Europium conjugated anti-IgG (Molecular Devices) were diluted 1:5,000. Membranes were visualized by SpectraMax i3&#x00D7; Multi-Mode Microplate Reader (Molecular Devices). ImageJ 1.52a software was employed for the analysis.</p>
</sec>
<sec>
<title>Cell viability assay</title>
<p>Cells were seeded in 24-well cell culture plate at a density of 4&#x00D7;10<sup>4</sup> cells/well and incubated with PrestoBlue Cell Viability Reagent (Thermo Fisher Scientific) for 30 min at 37&#x00B0;C. The fluorescence was measured using an excitation wavelength of 560 nm and emission of 590 nm by SpectraMax i3&#x00D7; Multi-Mode Microplate Reader (Molecular Devices). Each sample was analyzed in triplicate.</p>
</sec>
<sec>
<title>Cell proliferation</title>
<p>Cells after transfection were seeded into 16-well E-plates for impedance-based detection (ACEA Bioscience Inc) at density of 10<sup>4</sup> cells per well. The xCELLigence RTCA DP Instrument (ACEA Bioscience Inc) placed in a humidified incubator at 37&#x00B0;C and 5&#x0025; CO<sub>2</sub> was used for real-time monitoring of cell proliferation. The cell index was monitored every 30 min for 85 h and data were recorded by the supplied RTCA software. Each sample was analyzed in triplicate.</p>
</sec>
<sec>
<title>Determination of histone H3K4 methylation status and KDM5B level</title>
<p>Flow cytometry was used for the detection of H3K4 trimethylation and expression of KDM5B on protein level. Cells after treatment and/or transfection were washed with cold PBS (Thermo Fisher Scientific), trypsinized (trypsin-Thermo Fisher Scientific) and collected by centrifugation. Pellets of cells were washed with PBS and fixed in 3.6&#x0025; paraformaldehyde for 15 min at room temperature. Cell pellets were then washed with PBS and permeabilized by 90&#x0025; methanol for 1 h at &#x2212;20&#x00B0;C. Pellets were subsequently washed 3 times with 0.5&#x0025; bovine serum albumin (BSA-Roth) in PBS and were resuspended in primary antibody JARID1B Rabbit mAB diluted 1:1,000 (Cell Signaling Technology) or Anti-trimethyl-Histone H3 (Lys4) Rabbit (EMD Millipore Corp.) at dilution 1:400 and incubated for 1 h at laboratory temperature. Cells were then washed with 0.5&#x0025; BSA, resuspended in fluorochrome-conjugated secondary antibody Anti-Rabbit IgG (H&#x002B;L) Alexa Fluor<sup>&#x00AE;</sup> 647 Conjugate (Thermo Fisher Scientific) diluted 1:500 and incubated for 30 min at room temperature in dark. Washed and re-suspended cells were measured using a BD FACSCelesta (BD Bioscience), and data were analyzed by Flowlogic software (Inivai Technologies).</p>
</sec>
<sec>
<title>Cell cycle analysis</title>
<p>Cells after treatment and/or transfection were washed with cold PBS, trypsinized and collected by centrifugation. Pellets of cells were washed with PBS and fixed in 3.6&#x0025; paraformaldehyde for 10 min at room temperature. Cell pellets were then washed with PBS and permeabilized by 90&#x0025; methanol for 1 h at &#x2212;20&#x00B0;C. Pellets were washed with PBS, resuspended in 500 &#x00B5;l PBS and one drop of FxCycle&#x2122; Violet Ready Flow&#x2122; Reagent (Thermo Fisher Scientific) was added and after 30 min incubation were cells measured using a BD FACSCelesta (BD Bioscience), and data were analyzed by Flowlogic software (Inivai Technologies).</p>
</sec>
<sec>
<title>Wound healing assay</title>
<p>Neuroblastoma cells were seeded in 9.2 cm<sup>2</sup> dish in number 1.6&#x00D7;10<sup>5</sup> cells/ml of sensitive cells and 2.2&#x00D7;10<sup>5</sup> cells/ml of resistant cells, that allowed to reach 70&#x0025; confluence for 24 h at 37&#x00B0;C in 5&#x0025; CO<sub>2</sub> and then transfected with siRNA to KDM5B and Lincode non-targeting siRNA. 48 h after transfection was drawn the line across the dish&#x0027;s surface using a 1,000 &#x00B5;l sterile plastic tip, at that time the confluence was more than 80&#x0025;. After wounding, cells were grown in Iscove&#x0027;s Modified Dulbecco&#x0027;s medium (IMDM) with 5&#x0025; (v/v) FBS (both Thermo Fisher Scientific) and incubated at 37&#x00B0;C in 5&#x0025; CO<sub>2</sub>. For scratch assay, 80&#x2013;90&#x0025; confluence is recommended so that the cells do not overgrow (<xref rid="b21-ol-24-04-13485" ref-type="bibr">21</xref>,<xref rid="b22-ol-24-04-13485" ref-type="bibr">22</xref>). Pictures were captured at the same field immediately, 24 and 48 h after the wounding by microscope Olympus IX71 (Olympus) and ImageJ 1.52a software was employed for the analysis.</p>
</sec>
<sec>
<title>Statistical analysis</title>
<p>All experiments were independently repeated at least three times and data are shown as averages &#x00B1; standard error. One-way Anova with post-hoc Tukey HSD and two-way ANOVA followed by Bonferroni test (<uri xlink:href="https://astatsa.com/OneWay_Anova_with_TukeyHSD/">https://astatsa.com/OneWay_Anova_with_TukeyHSD/</uri>) were utilized when comparing the situations. Results from RT-qPCR were statistically compared using REST 2009 software (<xref rid="b23-ol-24-04-13485" ref-type="bibr">23</xref>). Significances (P&#x003C;0.05 was considered as significant) of the statistical analyses are shown in individual Figures and described in their legends.</p>
</sec>
</sec>
</sec>
<sec sec-type="results">
<title>Results</title>
<sec>
<title/>
<sec>
<title>KDM5B is downregulated in resistant neuroblastoma cell line</title>
<p>UKF-NB-4<sup>CDDP</sup> resulting from long-term cultivation with an increasing dose of CDDP was used as a model of drug resistance (<xref rid="b24-ol-24-04-13485" ref-type="bibr">24</xref>,<xref rid="b25-ol-24-04-13485" ref-type="bibr">25</xref>). We used this wide concentration range only to determine IC<sub>50</sub> using MTT test to demonstrate lower sensitivity in the cell line with experimentally induced chemoresistance (UKF-NB-4<sup>CDDP</sup>) compared to sensitive cells (UKF-NB-4). We used only one concentration (20 mikroM) in further experiments. This cell line has &#x007E;4 times higher IC<sub>50</sub> compared to the parental line UKF-NB-4 (<xref rid="f1-ol-24-04-13485" ref-type="fig">Fig. 1A</xref>). We examined the level of KDM5B mRNA and protein in both cell lines and the expression of this gene in UKF-NB-4<sup>CDDP</sup> and in both lines after incubation with cisplatin was related to the expression in UKF-NB-4 control. QRT-PCR results showed that KDM5B expression was noticeably lower in resistant cell line (P&#x003C;0.01). The same result was observed after incubation of these cells with CDDP; however, this compound did not further alter expression in resistant cell line (<xref rid="f1-ol-24-04-13485" ref-type="fig">Fig. 1B</xref>). A decrease in the level of KDM5B expression was also observed in UKF-NB-4CDDP at the protein level (<xref rid="f1-ol-24-04-13485" ref-type="fig">Fig. 1C, D</xref>). Furthermore, we observed the same results in another NBL cell line UKF-NB-3, where UKF-NB-3<sup>CDDP</sup> had lower levels of KDM5B mRNA (P&#x003C;0.05) and protein. CDDP did not modulate KDM5B expression (<xref rid="SD1-ol-24-04-13485" ref-type="supplementary-material">Fig. S1</xref>). In SK-N-AS KDM5B level was decreased by 48 h incubation with CDDP. In SK-N-AS<sup>CDDP</sup>, KDM5B was not modulated by cisplatin and there was no significant difference between sensitive SK-N-AS and resistant SK-N-A<sup>CDDP</sup> (<xref rid="SD1-ol-24-04-13485" ref-type="supplementary-material">Fig. S2</xref>). UKF-NB-4 and UKF-NB-3 cell lines have MYCN amplification, while SK-N-AS has no MYCN amplification. For further experiments, we selected UKF-NB-4 and UKF-NB-4<sup>CDDP</sup> cell lines.</p>
</sec>
<sec>
<title>KDM5B knockdown reduced KDM5B expression and upregulated histone H3K4 trimethylation in neuroblastoma cells</title>
<p>UKF-NB-4 and UKF-NB-4<sup>CDDP</sup> cells were transfected with KDM5B siRNA for 48 h and transfection resulted in a significant suppression of KDM5B level compared to cells transfected with non-coding siRNA transfected cells (P&#x003C;0.001) (<xref rid="f2-ol-24-04-13485" ref-type="fig">Fig. 2A</xref>). Flow cytometry was performed to determine the level of KDM5B protein, which decreased in both siRNA transfected cell lines (P&#x003C;0.01), while the trimethylation of histone H3K4me3 was significantly increased compared to the control group in UKF-NB-4 (P&#x003C;0.01) and UKF-NB-4CDDP (P&#x003C;0.05) (<xref rid="f2-ol-24-04-13485" ref-type="fig">Fig. 2B, C</xref>). The results demonstrated that KDM5B siRNA reduced KDM5B mRNA and protein expression and elevated protein H3K4me3 increased the trimethylation of histone H3K4 in UKF-NB-4 and UKF-NB-4<sup>CDDP</sup> cell lines.</p>
</sec>
<sec>
<title>KDM5B knockdown promoted cell proliferation and migration in resistant cell line</title>
<p>Proliferation of neuroblastoma cells after KDM5B siRNA transfection was evaluated by xCELLigence system. We found that KDM5B knockdown inhibited cell proliferation in sensitive cell line; however, silencing of KDM5B in resistant cells led to increased proliferation (<xref rid="f3-ol-24-04-13485" ref-type="fig">Fig. 3A</xref>). The wound healing assay showed that down-regulation of KDM5B promoted the migration of UKF-NB-4<sup>CDDP</sup> cells compared to UKF-NB-4 (<xref rid="f3-ol-24-04-13485" ref-type="fig">Fig. 3B</xref>). We also performed a cell viability assay, to see the impact of transfection on neuroblastoma cell lines. Results show, that KDM5B siRNA reduced the number of viable cells compared with non-coding siRNA transfected cells in sensitive cell line more significantly (P&#x003C;0.01), than in resistant cell line (P&#x003C;0.05). Increased sensitivity to CDDP (48 h treatment of these cells with CDDP) after silencing of KDM5B in sensitive cell line was observed (P&#x003C;0.05). Interestingly, KDM5B knockdown affected neither viability nor response to CDDP in resistant cells (<xref rid="f3-ol-24-04-13485" ref-type="fig">Fig. 3C</xref>).</p>
</sec>
<sec>
<title>KDM5B knockdown increases cell cycle S phase in resistant cell line</title>
<p>As shown above, KDM5B downregulation promotes cell proliferation and migration in resistant NBL cells (<xref rid="f3-ol-24-04-13485" ref-type="fig">Fig. 3</xref>). Thus, we explored the role of KDM5B in cell cycle, using flow cytometry. Consistent with proliferation and migration data, we found that KDM5B knockdown resulted in a significant increase in the S phase in UKF-NB-4CDDP resistant cell line (P&#x003C;0.05). In the sensitive cell line UKF-NB-4, silencing did not lead to any significant change in cell cycle (<xref rid="f4-ol-24-04-13485" ref-type="fig">Fig. 4</xref>).</p>
</sec>
</sec>
</sec>
<sec sec-type="discussion">
<title>Discussion</title>
<p>Aberrant epigenetic modifications, such as histone methylation, are widely described as essential players in cancer development and progression (<xref rid="b3-ol-24-04-13485" ref-type="bibr">3</xref>,<xref rid="b26-ol-24-04-13485" ref-type="bibr">26</xref>). KDM5B, is a histone lysine demethylase, whose dysregulation has been observed in numerous types of cancers and also has a role in the appearance of a drug-tolerant population (<xref rid="b11-ol-24-04-13485" ref-type="bibr">11</xref>,<xref rid="b27-ol-24-04-13485" ref-type="bibr">27</xref>,<xref rid="b28-ol-24-04-13485" ref-type="bibr">28</xref>). Growing evidence indicates that KDM5B act as an oncogene in numerous types of cancer, such as bladder, breast, lung, prostate, and ovarian cancer, and also in NBL (<xref rid="b29-ol-24-04-13485" ref-type="bibr">29</xref>&#x2013;<xref rid="b35-ol-24-04-13485" ref-type="bibr">35</xref>). Since the development of chemoresistance in high-risk NBL is a negative prognostic marker, we decided to investigate the importance of <italic>KDM5B</italic> expression for NBL cell growth and its chemoresistance to CDDP that is used in high-risk NBL therapy.</p>
<p>In this study, we demonstrated that <italic>KDM5B</italic> expression is markedly reduced in NBL cisplatin chemoresistant cells, compared to parental sensitive cells (<xref rid="f1-ol-24-04-13485" ref-type="fig">Fig. 1</xref>) which is associated with enhanced cell migration and invasion, as well as it may be possibly involved in drug resistance (<xref rid="f3-ol-24-04-13485" ref-type="fig">Fig. 3</xref>). However, KDM5B silencing did not changed the sensitivity of resistant cells to CDDP. Several different mechanisms in chemoresistance that were described in several studies may be involved and KDM5B expression is only one of those mechanisms. For example in (<xref rid="b25-ol-24-04-13485" ref-type="bibr">25</xref>) we described several different mechanisms of chemoresistance in one cell line with experimentally induced chemoresistance to ellipticine. These findings are consistent with the reported data, showing that KDM5B can play a dual role in cancer (<xref rid="b36-ol-24-04-13485" ref-type="bibr">36</xref>). Roesch <italic>et al</italic> found that <italic>KDM5B</italic> expression in malignant melanoma, especially in advanced and metastatic melanoma tissues, was significantly downregulated and this lysine demethylase has been shown to have immediate antiproliferative effects, but later has a role in continuous tumor growth and maintenance (<xref rid="b37-ol-24-04-13485" ref-type="bibr">37</xref>). Furthermore, the elimination of <italic>KDM5B</italic> leads to an initial acceleration of melanoma growth (<xref rid="b28-ol-24-04-13485" ref-type="bibr">28</xref>). The <italic>MYCN</italic> plays a crucial role in the malignant behavior of NBL and is associated with a poor prognosis (<xref rid="b13-ol-24-04-13485" ref-type="bibr">13</xref>,<xref rid="b38-ol-24-04-13485" ref-type="bibr">38</xref>). We detected a decrease in the level of KDM5B in UKF-NB-4<sup>CDDP</sup> and UKF-NB-3<sup>CDDP</sup> cisplatin resistant cell lines that are <italic>MYCN</italic> amplified while in SK-N-AS<sup>CDDP</sup> cell line without MYCN amplification KDM5B level has not been changed compared to sensitive SK-N-AS cells. We suppose that this may be caused by increased expression of MYCN in lines with amplification of this gene (<xref rid="b39-ol-24-04-13485" ref-type="bibr">39</xref>). Zhang <italic>et al</italic> suggested that n-Myc represses <italic>KDM5B</italic> gene transcription by direct binding to the Sp1-binding site-enriched region of the <italic>KDM5B</italic> gene promoter, most likely through the recruitment of histone deacetylases (<xref rid="b40-ol-24-04-13485" ref-type="bibr">40</xref>). This work showed that the suppression of <italic>KDM5B</italic> expression reduces NBL cell proliferation. However, n-Myc induces the proliferation of NBL cells and represses <italic>KDM5B</italic> expression, suggesting that n-Myc-mediated transcriptional repression of <italic>KDM5B</italic> counterintuitively reduces tumor cell proliferation (<xref rid="b30-ol-24-04-13485" ref-type="bibr">30</xref>).</p>
<p>In conclusion, the results of this study show that KDM5B knockdown leads to increased levels of H3K4me in both cisplatin sensitive and resistant cell lines (<xref rid="f2-ol-24-04-13485" ref-type="fig">Fig. 2</xref>) Based on this finding, it can be concluded that the function of lysine demethylase KDM5B i.e. demethylation of di- and tri-methylated histone H3K4 cannot be fully replaced by the other KDM5 family members in NBL cells. We proved increased H3K4 me 3 also after silencing of KDM5D (Podhorska N. unpublished results) and KDM5A and C we did not tested. We supposed that all KDM5 isoforms are necessary to ensure the adequate level of H3K4 me3. It can be concluded that the function of this histone lysine demethylase cannot be fully replaced by the others KDM5. Also, KDM5B silencing led to an increase of proliferation, and wound healing assay showed an increase in migration in resistant cell line. Moreover, in chemoresistant cells, it only minimally decreased viability after cisplatin treatment compared to sensitive cells (<xref rid="f3-ol-24-04-13485" ref-type="fig">Fig. 3</xref>). Compliant with these results in resistant cells, siKDM5B transfection resulted in an increase in cell cycle S phase (<xref rid="f4-ol-24-04-13485" ref-type="fig">Fig. 4</xref>). The effect of KDM5B on cell proliferation and the cell cycle of tumor cells varies in different tumors. The mechanism of the relationship between KDM5B and the cell cycle is not yet known, PI3K-AKT pathway activation (<xref rid="b41-ol-24-04-13485" ref-type="bibr">41</xref>), BRCA1 (<xref rid="b42-ol-24-04-13485" ref-type="bibr">42</xref>) and transcription factors E2F1 and E2F2 (<xref rid="b43-ol-24-04-13485" ref-type="bibr">43</xref>) are expected to be affected, but other mechanisms are also possible. In a series of tumors, its silence inhibits and reduces the percentage of cells in S phase, for example in prostate cancer (<xref rid="b44-ol-24-04-13485" ref-type="bibr">44</xref>), hepatocellular carcinoma (<xref rid="b43-ol-24-04-13485" ref-type="bibr">43</xref>), bladder cancer and small cell lung carcinoma (<xref rid="b33-ol-24-04-13485" ref-type="bibr">33</xref>) or acute lymphoblastic leukemia (<xref rid="b42-ol-24-04-13485" ref-type="bibr">42</xref>). On the other hand, in melanoma it has the opposite effect, i.e. the silencing of KDM5B accelerates growth and increases the proportion of cells in the S phase (<xref rid="b37-ol-24-04-13485" ref-type="bibr">37</xref>). KDM5B transfection induced cell differentiation in hypopharyngeal squamous cell carcinoma and, on the contrary, it&#x0027;s silencing accelerated growth of cells (<xref rid="b41-ol-24-04-13485" ref-type="bibr">41</xref>). The explanation of different response of sensitive and resistant NBL cells to KDM5B silencing is not clear and will be subject of further studies. However, we hypothesized that it is related to the different expression of this gene in sensitive and resistant NBL cell lines.</p>
<p>There is emerging evidence for the deregulation of KDM5B and the important phenotypic consequences in various types of cancer, making this enzyme a promising factor for the prediction of sensitivity to CDDP. It will be necessary to study the relationship between cisplatin sensitivity and histone methylation to understand resistance to this drug.</p>
</sec>
<sec sec-type="supplementary-material">
<title>Supplementary Material</title>
<supplementary-material id="SD1-ol-24-04-13485" content-type="local-data">
<caption>
<title>Supporting Data</title>
</caption>
<media mimetype="application" mime-subtype="pdf" xlink:href="Supplementary_Data.pdf"/>
</supplementary-material>
</sec>
</body>
<back>
<ack>
<title>Acknowledgements</title>
<p>Not applicable.</p>
</ack>
<sec sec-type="data-availability">
<title>Availability of data and materials</title>
<p>The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.</p>
</sec>
<sec>
<title>Authors&#x0027; contributions</title>
<p>TE designed and led this study. MB performed RT-qPCR, western blotting, flow cytometry and cell proliferation assays. NP performed siRNA transfection, RT-qPCR, western blotting and flow cytometry. MB and NP analyzed the data and performed the statistical analysis. MB and NP wrote the manuscript. AV designed experiments. MB, NP, AV and TE confirm the authenticity of all the raw data. All authors have reviewed the manuscript and read and approved the final manuscript.</p>
</sec>
<sec>
<title>Ethics approval and consent to participate</title>
<p>Not applicable.</p>
</sec>
<sec>
<title>Patient consent for publication</title>
<p>Not applicable.</p>
</sec>
<sec sec-type="COI-statement">
<title>Competing interests</title>
<p>The authors declare that they have no competing interests.</p>
</sec>
<ref-list>
<title>References</title>
<ref id="b1-ol-24-04-13485"><label>1</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Sharma</surname><given-names>S</given-names></name><name><surname>Kelly</surname><given-names>TK</given-names></name><name><surname>Jones</surname><given-names>PA</given-names></name></person-group><article-title>Epigenetics in cancer</article-title><source>Carcinogenesis</source><volume>31</volume><fpage>27</fpage><lpage>36</lpage><year>2010</year><pub-id pub-id-type="doi">10.1093/carcin/bgp220</pub-id><pub-id pub-id-type="pmid">19752007</pub-id></element-citation></ref>
<ref id="b2-ol-24-04-13485"><label>2</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Dawson</surname><given-names>MA</given-names></name><name><surname>Kouzarides</surname><given-names>T</given-names></name></person-group><article-title>Cancer epigenetics: From mechanism to therapy</article-title><source>Cell</source><volume>150</volume><fpage>12</fpage><lpage>27</lpage><year>2012</year><pub-id pub-id-type="doi">10.1016/j.cell.2012.06.013</pub-id><pub-id pub-id-type="pmid">22770212</pub-id></element-citation></ref>
<ref id="b3-ol-24-04-13485"><label>3</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Greer</surname><given-names>EL</given-names></name><name><surname>Shi</surname><given-names>Y</given-names></name></person-group><article-title>Histone methylation: A dynamic mark in health, disease and inheritance</article-title><source>Nat Rev Genet</source><volume>13</volume><fpage>343</fpage><lpage>357</lpage><year>2012</year><pub-id pub-id-type="doi">10.1038/nrg3173</pub-id><pub-id pub-id-type="pmid">22473383</pub-id></element-citation></ref>
<ref id="b4-ol-24-04-13485"><label>4</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hoffmann</surname><given-names>I</given-names></name><name><surname>Roatsch</surname><given-names>M</given-names></name><name><surname>Schmitt</surname><given-names>ML</given-names></name><name><surname>Carlino</surname><given-names>L</given-names></name><name><surname>Pippel</surname><given-names>M</given-names></name><name><surname>Sippl</surname><given-names>W</given-names></name><name><surname>Jung</surname><given-names>M</given-names></name></person-group><article-title>The role of histone demethylases in cancer therapy</article-title><source>Mol Oncol</source><volume>6</volume><fpage>683</fpage><lpage>703</lpage><year>2012</year><pub-id pub-id-type="doi">10.1016/j.molonc.2012.07.004</pub-id><pub-id pub-id-type="pmid">22902149</pub-id></element-citation></ref>
<ref id="b5-ol-24-04-13485"><label>5</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Li</surname><given-names>X</given-names></name><name><surname>Su</surname><given-names>Y</given-names></name><name><surname>Pan</surname><given-names>J</given-names></name><name><surname>Zhou</surname><given-names>Z</given-names></name><name><surname>Song</surname><given-names>B</given-names></name><name><surname>Xiong</surname><given-names>E</given-names></name><name><surname>Chen</surname><given-names>Z</given-names></name></person-group><article-title>Connexin 26 is down-regulated by KDM5B in the progression of bladder cancer</article-title><source>Int J Mol Sci</source><volume>14</volume><fpage>7866</fpage><lpage>7879</lpage><year>2013</year><pub-id pub-id-type="doi">10.3390/ijms14047866</pub-id><pub-id pub-id-type="pmid">23579952</pub-id></element-citation></ref>
<ref id="b6-ol-24-04-13485"><label>6</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Sun</surname><given-names>H</given-names></name><name><surname>Jiang</surname><given-names>W</given-names></name><name><surname>Hu</surname><given-names>J</given-names></name><name><surname>Ma</surname><given-names>Z</given-names></name></person-group><article-title>Prognostic value of elevated KDM5B expression in patients with laryngeal squamous cell carcinoma</article-title><source>Int J Clin Exp Pathol</source><volume>12</volume><fpage>3500</fpage><lpage>3506</lpage><year>2019</year><pub-id pub-id-type="pmid">31934196</pub-id></element-citation></ref>
<ref id="b7-ol-24-04-13485"><label>7</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bamodu</surname><given-names>OA</given-names></name><name><surname>Huang</surname><given-names>WC</given-names></name><name><surname>Lee</surname><given-names>WH</given-names></name><name><surname>Wu</surname><given-names>A</given-names></name><name><surname>Wang</surname><given-names>LS</given-names></name><name><surname>Hsiao</surname><given-names>M</given-names></name><name><surname>Yeh</surname><given-names>CT</given-names></name><name><surname>Chao</surname><given-names>TY</given-names></name></person-group><article-title>Aberrant KDM5B expression promotes aggressive breast cancer through MALAT1 overexpression and downregulation of hsa-miR-448</article-title><source>BMC Cancer</source><volume>16</volume><fpage>160</fpage><year>2016</year><pub-id pub-id-type="doi">10.1186/s12885-016-2108-5</pub-id><pub-id pub-id-type="pmid">26917489</pub-id></element-citation></ref>
<ref id="b8-ol-24-04-13485"><label>8</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Plch</surname><given-names>J</given-names></name><name><surname>Hrabeta</surname><given-names>J</given-names></name><name><surname>Eckschlager</surname><given-names>T</given-names></name></person-group><article-title>KDM5 demethylases and their role in cancer cell chemoresistance</article-title><source>Int J Cancer</source><volume>144</volume><fpage>221</fpage><lpage>231</lpage><year>2019</year><pub-id pub-id-type="doi">10.1002/ijc.31881</pub-id><pub-id pub-id-type="pmid">30246379</pub-id></element-citation></ref>
<ref id="b9-ol-24-04-13485"><label>9</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Cloos</surname><given-names>PAC</given-names></name><name><surname>Christensen</surname><given-names>J</given-names></name><name><surname>Agger</surname><given-names>K</given-names></name><name><surname>Helin</surname><given-names>K</given-names></name></person-group><article-title>Erasing the methyl mark: Histone demethylases at the center of cellular differentiation and disease</article-title><source>Genes Dev</source><volume>22</volume><fpage>1115</fpage><lpage>1140</lpage><year>2008</year><pub-id pub-id-type="doi">10.1101/gad.1652908</pub-id><pub-id pub-id-type="pmid">18451103</pub-id></element-citation></ref>
<ref id="b10-ol-24-04-13485"><label>10</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Li</surname><given-names>G</given-names></name><name><surname>Kanagasabai</surname><given-names>T</given-names></name><name><surname>Lu</surname><given-names>W</given-names></name><name><surname>Zou</surname><given-names>MR</given-names></name><name><surname>Zhang</surname><given-names>SM</given-names></name><name><surname>Celada</surname><given-names>SI</given-names></name><name><surname>Izban</surname><given-names>MG</given-names></name><name><surname>Liu</surname><given-names>Q</given-names></name><name><surname>Lu</surname><given-names>T</given-names></name><name><surname>Ballard</surname><given-names>BR</given-names></name><etal/></person-group><article-title>KDM5B is essential for the hyperactivation of PI3K/AKT signaling in prostate tumorigenesis</article-title><source>Cancer Res</source><volume>80</volume><fpage>4633</fpage><lpage>4643</lpage><year>2020</year><pub-id pub-id-type="doi">10.1158/0008-5472.CAN-20-0505</pub-id><pub-id pub-id-type="pmid">32868382</pub-id></element-citation></ref>
<ref id="b11-ol-24-04-13485"><label>11</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kuo</surname><given-names>YT</given-names></name><name><surname>Liu</surname><given-names>YL</given-names></name><name><surname>Adebayo</surname><given-names>BO</given-names></name><name><surname>Shih</surname><given-names>PH</given-names></name><name><surname>Lee</surname><given-names>WH</given-names></name><name><surname>Wang</surname><given-names>LS</given-names></name><name><surname>Liao</surname><given-names>YF</given-names></name><name><surname>Hsu</surname><given-names>WM</given-names></name><name><surname>Yeh</surname><given-names>CT</given-names></name><name><surname>Lin</surname><given-names>CM</given-names></name></person-group><article-title>JARID1B Expression plays a critical role in chemoresistance and stem cell-like phenotype of neuroblastoma cells</article-title><source>PLoS One</source><volume>10</volume><fpage>e0125343</fpage><year>2015</year><pub-id pub-id-type="doi">10.1371/journal.pone.0125343</pub-id><pub-id pub-id-type="pmid">25951238</pub-id></element-citation></ref>
<ref id="b12-ol-24-04-13485"><label>12</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Maris</surname><given-names>JM</given-names></name></person-group><article-title>Recent advances in neuroblastoma</article-title><source>N Engl J Med</source><volume>362</volume><fpage>2202</fpage><lpage>2211</lpage><year>2010</year><pub-id pub-id-type="doi">10.1056/NEJMra0804577</pub-id><pub-id pub-id-type="pmid">20558371</pub-id></element-citation></ref>
<ref id="b13-ol-24-04-13485"><label>13</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Cheung</surname><given-names>NK</given-names></name><name><surname>Dyer</surname><given-names>MA</given-names></name></person-group><article-title>Neuroblastoma: Developmental biology, cancer genomics, and immunotherapy</article-title><source>Nat Rev Cancer</source><volume>13</volume><fpage>397</fpage><lpage>411</lpage><year>2013</year><pub-id pub-id-type="doi">10.1038/nrc3526</pub-id><pub-id pub-id-type="pmid">23702928</pub-id></element-citation></ref>
<ref id="b14-ol-24-04-13485"><label>14</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Nara</surname><given-names>K</given-names></name><name><surname>Kusafuka</surname><given-names>T</given-names></name><name><surname>Yoneda</surname><given-names>A</given-names></name><name><surname>Oue</surname><given-names>T</given-names></name><name><surname>Sangkhathat</surname><given-names>S</given-names></name><name><surname>Fukuzawa</surname><given-names>M</given-names></name></person-group><article-title>Silencing of MYCN by RNA interference induces growth inhibition, apoptotic activity and cell differentiation in a neuroblastoma cell line with MYCN amplification</article-title><source>Int J Oncol</source><volume>30</volume><fpage>1189</fpage><lpage>1196</lpage><year>2007</year><pub-id pub-id-type="pmid">17390021</pub-id></element-citation></ref>
<ref id="b15-ol-24-04-13485"><label>15</label><element-citation publication-type="book"><collab collab-type="corp-author">M. S. MYCN Amplification in Neuroblastoma</collab><person-group person-group-type="editor"><name><surname>Brodeur</surname><given-names>GM</given-names></name><name><surname>Sawada</surname><given-names>T</given-names></name><name><surname>Tsuchida</surname><given-names>YVP</given-names></name></person-group><source>Neuroblastoma</source><publisher-name>Elsevier Science B.V</publisher-name><fpage>75</fpage><lpage>84</lpage><year>2000</year></element-citation></ref>
<ref id="b16-ol-24-04-13485"><label>16</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kang</surname><given-names>JH</given-names></name><name><surname>Rychahou</surname><given-names>PG</given-names></name><name><surname>Ishola</surname><given-names>TA</given-names></name><name><surname>Qiao</surname><given-names>J</given-names></name><name><surname>Evers</surname><given-names>BM</given-names></name><name><surname>Chung</surname><given-names>DH</given-names></name></person-group><article-title>MYCN silencing induces differentiation and apoptosis in human neuroblastoma cells</article-title><source>Biochem Biophys Res Commun</source><volume>351</volume><fpage>192</fpage><lpage>197</lpage><year>2006</year><pub-id pub-id-type="doi">10.1016/j.bbrc.2006.10.020</pub-id><pub-id pub-id-type="pmid">17055458</pub-id></element-citation></ref>
<ref id="b17-ol-24-04-13485"><label>17</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Maeshima</surname><given-names>R</given-names></name><name><surname>Moulding</surname><given-names>D</given-names></name><name><surname>Stoker</surname><given-names>AW</given-names></name><name><surname>Hart</surname><given-names>SL</given-names></name></person-group><article-title>MYCN Silencing by RNAi induces neurogenesis and suppresses proliferation in models of neuroblastoma with resistance to retinoic acid</article-title><source>Nucleic Acid Ther</source><volume>30</volume><fpage>237</fpage><lpage>248</lpage><year>2020</year><pub-id pub-id-type="doi">10.1089/nat.2019.0831</pub-id><pub-id pub-id-type="pmid">32240058</pub-id></element-citation></ref>
<ref id="b18-ol-24-04-13485"><label>18</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bachetti</surname><given-names>T</given-names></name><name><surname>Di Paolo</surname><given-names>D</given-names></name><name><surname>Di Lascio</surname><given-names>S</given-names></name><name><surname>Mirisola</surname><given-names>V</given-names></name><name><surname>Brignole</surname><given-names>C</given-names></name><name><surname>Bellotti</surname><given-names>M</given-names></name><name><surname>Caffa</surname><given-names>I</given-names></name><name><surname>Ferraris</surname><given-names>C</given-names></name><name><surname>Fiore</surname><given-names>M</given-names></name><name><surname>Fornasari</surname><given-names>D</given-names></name><etal/></person-group><article-title>PHOX2B-mediated regulation of ALK expression: In vitro identification of a functional relationship between two genes involved in neuroblastoma</article-title><source>PLoS One</source><volume>5</volume><fpage>e13108</fpage><year>2010</year><pub-id pub-id-type="doi">10.1371/journal.pone.0013108</pub-id><pub-id pub-id-type="pmid">20957039</pub-id></element-citation></ref>
<ref id="b19-ol-24-04-13485"><label>19</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Di Paolo</surname><given-names>D</given-names></name><name><surname>Pastorino</surname><given-names>F</given-names></name><name><surname>Brignole</surname><given-names>C</given-names></name><name><surname>Corrias</surname><given-names>MV</given-names></name><name><surname>Emionite</surname><given-names>L</given-names></name><name><surname>Cilli</surname><given-names>M</given-names></name><name><surname>Tamma</surname><given-names>R</given-names></name><name><surname>Priddy</surname><given-names>L</given-names></name><name><surname>Amaro</surname><given-names>A</given-names></name><name><surname>Ferrari</surname><given-names>D</given-names></name><etal/></person-group><article-title>Combined replenishment of miR-34a and let-7b by targeted nanoparticles inhibits tumor growth in neuroblastoma preclinical models</article-title><source>Small</source><volume>16</volume><fpage>e1906426</fpage><year>2020</year><pub-id pub-id-type="doi">10.1002/smll.201906426</pub-id><pub-id pub-id-type="pmid">32323486</pub-id></element-citation></ref>
<ref id="b20-ol-24-04-13485"><label>20</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Olechnowicz</surname><given-names>SW</given-names></name><name><surname>Fedele</surname><given-names>AO</given-names></name><name><surname>Peet</surname><given-names>DJ</given-names></name></person-group><article-title>Hypoxic Induction of the Regulator of G-protein signalling 4 gene is mediated by the hypoxia-inducible factor pathway</article-title><source>PLoS One</source><volume>7</volume><fpage>e44564</fpage><year>2012</year><pub-id pub-id-type="doi">10.1371/journal.pone.0044564</pub-id><pub-id pub-id-type="pmid">22970249</pub-id></element-citation></ref>
<ref id="b21-ol-24-04-13485"><label>21</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Zaatiti</surname><given-names>H</given-names></name><name><surname>Abdallah</surname><given-names>J</given-names></name><name><surname>Nasr</surname><given-names>Z</given-names></name><name><surname>Khazen</surname><given-names>G</given-names></name><name><surname>Sandler</surname><given-names>A</given-names></name><name><surname>Abou-Antoun</surname><given-names>TJ</given-names></name></person-group><article-title>Tumorigenic proteins upregulated in the MYCN-amplified IMR-32 human neuroblastoma cells promote proliferation and migration</article-title><source>Int J Oncol</source><volume>52</volume><fpage>787</fpage><lpage>803</lpage><year>2018</year><pub-id pub-id-type="pmid">29328367</pub-id></element-citation></ref>
<ref id="b22-ol-24-04-13485"><label>22</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Cormier</surname><given-names>N</given-names></name><name><surname>Yeo</surname><given-names>A</given-names></name><name><surname>Fiorentino</surname><given-names>E</given-names></name><name><surname>Paxson</surname><given-names>J</given-names></name></person-group><article-title>Optimization of the wound scratch assay to detect changes in murine mesenchymal stromal cell migration after damage by soluble cigarette smoke extract</article-title><source>J Vis Exp</source><fpage>e53414</fpage><year>2015</year><pub-id pub-id-type="pmid">26709527</pub-id></element-citation></ref>
<ref id="b23-ol-24-04-13485"><label>23</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Pfaffl</surname><given-names>MW</given-names></name><name><surname>Horgan</surname><given-names>GW</given-names></name><name><surname>Dempfle</surname><given-names>L</given-names></name></person-group><article-title>Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR</article-title><source>Nucleic Acids Res</source><volume>30</volume><fpage>e36</fpage><year>2002</year><pub-id pub-id-type="doi">10.1093/nar/30.9.e36</pub-id><pub-id pub-id-type="pmid">11972351</pub-id></element-citation></ref>
<ref id="b24-ol-24-04-13485"><label>24</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Bedrnicek</surname><given-names>J</given-names></name><name><surname>Vicha</surname><given-names>A</given-names></name><name><surname>Jarosova</surname><given-names>M</given-names></name><name><surname>Holzerova</surname><given-names>M</given-names></name><name><surname>Cinatl</surname><given-names>J</given-names><suffix>Jr</suffix></name><name><surname>Michaelis</surname><given-names>M</given-names></name><name><surname>Cinatl</surname><given-names>J</given-names></name><name><surname>Eckschlager</surname><given-names>T</given-names></name></person-group><article-title>Characterization of drug-resistant neuroblastoma cell lines by comparative genomic hybridization</article-title><source>Neoplasma</source><volume>52</volume><fpage>415</fpage><lpage>419</lpage><year>2005</year><pub-id pub-id-type="pmid">16151587</pub-id></element-citation></ref>
<ref id="b25-ol-24-04-13485"><label>25</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Proch&#x00E1;zka</surname><given-names>P</given-names></name><name><surname>Libra</surname><given-names>A</given-names></name><name><surname>Zemanov&#x00E1;</surname><given-names>Z</given-names></name><name><surname>H&#x0159;eba&#x010D;kov&#x00E1;</surname><given-names>J</given-names></name><name><surname>Poljakov&#x00E1;</surname><given-names>J</given-names></name><name><surname>Hrab&#x011B;ta</surname><given-names>J</given-names></name><name><surname>Bun&#x010D;ek</surname><given-names>M</given-names></name><name><surname>Stiborov&#x00E1;</surname><given-names>M</given-names></name><name><surname>Eckschlager</surname><given-names>T</given-names></name></person-group><article-title>Mechanisms of ellipticine-mediated resistance in UKF-NB-4 neuroblastoma cells</article-title><source>Cancer Sci</source><volume>103</volume><fpage>334</fpage><lpage>341</lpage><year>2012</year><pub-id pub-id-type="doi">10.1111/j.1349-7006.2011.02137.x</pub-id><pub-id pub-id-type="pmid">22040216</pub-id></element-citation></ref>
<ref id="b26-ol-24-04-13485"><label>26</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Kanwal</surname><given-names>R</given-names></name><name><surname>Gupta</surname><given-names>S</given-names></name></person-group><article-title>Epigenetic modifications in cancer</article-title><source>Clin Genet</source><volume>81</volume><fpage>303</fpage><lpage>311</lpage><year>2011</year><pub-id pub-id-type="doi">10.1111/j.1399-0004.2011.01809.x</pub-id><pub-id pub-id-type="pmid">22082348</pub-id></element-citation></ref>
<ref id="b27-ol-24-04-13485"><label>27</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Pippa</surname><given-names>S</given-names></name><name><surname>Mannironi</surname><given-names>C</given-names></name><name><surname>Licursi</surname><given-names>V</given-names></name><name><surname>Bombardi</surname><given-names>L</given-names></name><name><surname>Colotti</surname><given-names>G</given-names></name><name><surname>Cundari</surname><given-names>E</given-names></name><name><surname>Mollica</surname><given-names>A</given-names></name><name><surname>Coluccia</surname><given-names>A</given-names></name><name><surname>Naccarato</surname><given-names>V</given-names></name><name><surname>La Regina</surname><given-names>G</given-names></name><etal/></person-group><article-title>Small molecule inhibitors of KDM5 histone demethylases increase the radiosensitivity of breast cancer cells overexpressing JARID1B</article-title><source>Molecules</source><volume>24</volume><fpage>1739</fpage><year>2019</year><pub-id pub-id-type="doi">10.3390/molecules24091739</pub-id><pub-id pub-id-type="pmid">31060229</pub-id></element-citation></ref>
<ref id="b28-ol-24-04-13485"><label>28</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Xu</surname><given-names>W</given-names></name><name><surname>Zhou</surname><given-names>B</given-names></name><name><surname>Zhao</surname><given-names>X</given-names></name><name><surname>Zhu</surname><given-names>L</given-names></name><name><surname>Xu</surname><given-names>J</given-names></name><name><surname>Jiang</surname><given-names>Z</given-names></name><name><surname>Chen</surname><given-names>D</given-names></name><name><surname>Wei</surname><given-names>Q</given-names></name><name><surname>Han</surname><given-names>M</given-names></name><name><surname>Feng</surname><given-names>L</given-names></name><etal/></person-group><article-title>KDM5B demethylates H3K4 to recruit XRCC1 and promote chemoresistance</article-title><source>Int J Biol Sci</source><volume>14</volume><fpage>1122</fpage><lpage>1132</lpage><year>2018</year><pub-id pub-id-type="doi">10.7150/ijbs.25881</pub-id><pub-id pub-id-type="pmid">29989047</pub-id></element-citation></ref>
<ref id="b29-ol-24-04-13485"><label>29</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Xiang</surname><given-names>Y</given-names></name><name><surname>Zhu</surname><given-names>Z</given-names></name><name><surname>Han</surname><given-names>G</given-names></name><name><surname>Ye</surname><given-names>X</given-names></name><name><surname>Xu</surname><given-names>B</given-names></name><name><surname>Peng</surname><given-names>Z</given-names></name><name><surname>Ma</surname><given-names>Y</given-names></name><name><surname>Yu</surname><given-names>Y</given-names></name><name><surname>Lin</surname><given-names>H</given-names></name><name><surname>Chen</surname><given-names>AP</given-names></name><name><surname>Chen</surname><given-names>CD</given-names></name></person-group><article-title>JARID1B is a histone H3 lysine 4 demethylase up-regulated in prostate cancer</article-title><source>Proc Natl Acad Sci USA</source><volume>104</volume><fpage>19226</fpage><lpage>19231</lpage><year>2007</year><pub-id pub-id-type="doi">10.1073/pnas.0700735104</pub-id><pub-id pub-id-type="pmid">18048344</pub-id></element-citation></ref>
<ref id="b30-ol-24-04-13485"><label>30</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Klein</surname><given-names>BJ</given-names></name><name><surname>Piao</surname><given-names>L</given-names></name><name><surname>Xi</surname><given-names>Y</given-names></name><name><surname>Rincon-Arano</surname><given-names>H</given-names></name><name><surname>Rothbart</surname><given-names>SB</given-names></name><name><surname>Peng</surname><given-names>D</given-names></name><name><surname>Wen</surname><given-names>H</given-names></name><name><surname>Larson</surname><given-names>C</given-names></name><name><surname>Zhang</surname><given-names>X</given-names></name><name><surname>Zheng</surname><given-names>X</given-names></name><etal/></person-group><article-title>The histone-H3K4-specific demethylase KDM5B Binds to its substrate and product through distinct PHD fingers</article-title><source>Cell Rep</source><volume>6</volume><fpage>325</fpage><lpage>335</lpage><year>2014</year><pub-id pub-id-type="doi">10.1016/j.celrep.2013.12.021</pub-id><pub-id pub-id-type="pmid">24412361</pub-id></element-citation></ref>
<ref id="b31-ol-24-04-13485"><label>31</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Lu</surname><given-names>PJ</given-names></name><name><surname>Sundquist</surname><given-names>K</given-names></name><name><surname>Baeckstrom</surname><given-names>D</given-names></name><name><surname>Poulsom</surname><given-names>R</given-names></name><name><surname>Hanby</surname><given-names>A</given-names></name><name><surname>Meier-Ewert</surname><given-names>S</given-names></name><name><surname>Jones</surname><given-names>T</given-names></name><name><surname>Mitchell</surname><given-names>M</given-names></name><name><surname>Pitha-Rowe</surname><given-names>P</given-names></name><name><surname>Freemont</surname><given-names>P</given-names></name><name><surname>Taylor-Papadimitriou</surname><given-names>J</given-names></name></person-group><article-title>A novel gene (PLU-1) containing highly conserved putative DNA/chromatin binding motifs is specifically up-regulated in breast cancer</article-title><source>J Biol Chem</source><volume>274</volume><fpage>15633</fpage><lpage>15645</lpage><year>1999</year><pub-id pub-id-type="doi">10.1074/jbc.274.22.15633</pub-id><pub-id pub-id-type="pmid">10336460</pub-id></element-citation></ref>
<ref id="b32-ol-24-04-13485"><label>32</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Yamane</surname><given-names>K</given-names></name><name><surname>Tateishi</surname><given-names>K</given-names></name><name><surname>Klose</surname><given-names>RJ</given-names></name><name><surname>Fang</surname><given-names>J</given-names></name><name><surname>Fabrizio</surname><given-names>LA</given-names></name><name><surname>Erdjument-Bromage</surname><given-names>H</given-names></name><name><surname>Taylor-Papadimitriou</surname><given-names>J</given-names></name><name><surname>Tempst</surname><given-names>P</given-names></name><name><surname>Zhang</surname><given-names>Y</given-names></name></person-group><article-title>PLU-1 Is an H3K4 demethylase involved in transcriptional repression and breast cancer cell proliferation</article-title><source>Mol Cell</source><volume>25</volume><fpage>801</fpage><lpage>812</lpage><year>2007</year><pub-id pub-id-type="doi">10.1016/j.molcel.2007.03.001</pub-id><pub-id pub-id-type="pmid">17363312</pub-id></element-citation></ref>
<ref id="b33-ol-24-04-13485"><label>33</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Hayami</surname><given-names>S</given-names></name><name><surname>Yoshimatsu</surname><given-names>M</given-names></name><name><surname>Veerakumarasivam</surname><given-names>A</given-names></name><name><surname>Unoki</surname><given-names>M</given-names></name><name><surname>Iwai</surname><given-names>Y</given-names></name><name><surname>Tsunoda</surname><given-names>T</given-names></name><name><surname>Field</surname><given-names>HI</given-names></name><name><surname>Kelly</surname><given-names>JD</given-names></name><name><surname>Neal</surname><given-names>DE</given-names></name><name><surname>Yamaue</surname><given-names>H</given-names></name><etal/></person-group><article-title>Overexpression of the JmjC histone demethylase KDM5B in human carcinogenesis: Involvement in the proliferation of cancer cells through the E2F/RB pathway</article-title><source>Mol Cancer</source><volume>9</volume><fpage>59</fpage><year>2010</year><pub-id pub-id-type="doi">10.1186/1476-4598-9-59</pub-id><pub-id pub-id-type="pmid">20226085</pub-id></element-citation></ref>
<ref id="b34-ol-24-04-13485"><label>34</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Yamamoto</surname><given-names>S</given-names></name><name><surname>Wu</surname><given-names>Z</given-names></name><name><surname>Russnes</surname><given-names>HG</given-names></name><name><surname>Takagi</surname><given-names>S</given-names></name><name><surname>Peluffo</surname><given-names>G</given-names></name><name><surname>Vaske</surname><given-names>C</given-names></name><name><surname>Zhao</surname><given-names>X</given-names></name><name><surname>Moen Vollan</surname><given-names>HK</given-names></name><name><surname>Maruyama</surname><given-names>R</given-names></name><name><surname>Ekram</surname><given-names>MB</given-names></name><etal/></person-group><article-title>JARID1B is a luminal lineage-driving oncogene in breast cancer</article-title><source>Cancer Cell</source><volume>25</volume><fpage>762</fpage><lpage>777</lpage><year>2014</year><pub-id pub-id-type="doi">10.1016/j.ccr.2014.04.024</pub-id><pub-id pub-id-type="pmid">24937458</pub-id></element-citation></ref>
<ref id="b35-ol-24-04-13485"><label>35</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Wang</surname><given-names>L</given-names></name><name><surname>Mao</surname><given-names>Y</given-names></name><name><surname>Du</surname><given-names>G</given-names></name><name><surname>He</surname><given-names>C</given-names></name><name><surname>Han</surname><given-names>S</given-names></name></person-group><article-title>Overexpression of JARID1B is associated with poor prognosis and chemotherapy resistance in epithelial ovarian cancer</article-title><source>Tumour Biol</source><volume>36</volume><fpage>2465</fpage><lpage>2472</lpage><year>2015</year><pub-id pub-id-type="doi">10.1007/s13277-014-2859-z</pub-id><pub-id pub-id-type="pmid">25663457</pub-id></element-citation></ref>
<ref id="b36-ol-24-04-13485"><label>36</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Roesch</surname><given-names>A</given-names></name><name><surname>Becker</surname><given-names>B</given-names></name><name><surname>Meyer</surname><given-names>S</given-names></name><name><surname>Wild</surname><given-names>P</given-names></name><name><surname>Hafner</surname><given-names>C</given-names></name><name><surname>Landthaler</surname><given-names>M</given-names></name><name><surname>Vogt</surname><given-names>T</given-names></name></person-group><article-title>Retinoblastoma-binding protein 2-homolog 1: A retinoblastoma-binding protein downregulated in malignant melanomas</article-title><source>Mod Pathol</source><volume>18</volume><fpage>1249</fpage><lpage>1257</lpage><year>2005</year><pub-id pub-id-type="doi">10.1038/modpathol.3800413</pub-id><pub-id pub-id-type="pmid">15803180</pub-id></element-citation></ref>
<ref id="b37-ol-24-04-13485"><label>37</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Roesch</surname><given-names>A</given-names></name><name><surname>Fukunaga-Kalabis</surname><given-names>M</given-names></name><name><surname>Schmidt</surname><given-names>EC</given-names></name><name><surname>Zabierowski</surname><given-names>SE</given-names></name><name><surname>Brafford</surname><given-names>PA</given-names></name><name><surname>Vultur</surname><given-names>A</given-names></name><name><surname>Basu</surname><given-names>D</given-names></name><name><surname>Gimotty</surname><given-names>P</given-names></name><name><surname>Vogt</surname><given-names>T</given-names></name><name><surname>Herlyn</surname><given-names>M</given-names></name></person-group><article-title>A Temporarily distinct subpopulation of slow-cycling melanoma cells is required for continuous tumor growth</article-title><source>Cell</source><volume>141</volume><fpage>583</fpage><lpage>594</lpage><year>2010</year><pub-id pub-id-type="doi">10.1016/j.cell.2010.04.020</pub-id><pub-id pub-id-type="pmid">20478252</pub-id></element-citation></ref>
<ref id="b38-ol-24-04-13485"><label>38</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Smith</surname><given-names>V</given-names></name><name><surname>Foster</surname><given-names>J</given-names></name></person-group><article-title>High-risk neuroblastoma treatment review</article-title><source>Children (Basel)</source><volume>5</volume><fpage>114</fpage><year>2018</year><pub-id pub-id-type="pmid">30154341</pub-id></element-citation></ref>
<ref id="b39-ol-24-04-13485"><label>39</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Feriancikova</surname><given-names>B</given-names></name><name><surname>Feglarova</surname><given-names>T</given-names></name><name><surname>Krskova</surname><given-names>L</given-names></name><name><surname>Eckschlager</surname><given-names>T</given-names></name><name><surname>Vicha</surname><given-names>A</given-names></name><name><surname>Hrabeta</surname><given-names>J</given-names></name></person-group><article-title>Miat is an upstream regulator of NMYC and the disruption of the MIAT/NMYC axis induces cell death in NMYC amplified neuroblastoma cell lines</article-title><source>Int J Mol Sci</source><volume>22</volume><fpage>3393</fpage><year>2021</year><pub-id pub-id-type="doi">10.3390/ijms22073393</pub-id><pub-id pub-id-type="pmid">33806217</pub-id></element-citation></ref>
<ref id="b40-ol-24-04-13485"><label>40</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname><given-names>L</given-names></name><name><surname>Sokolowski</surname><given-names>N</given-names></name><name><surname>Atmadibrata</surname><given-names>B</given-names></name><name><surname>Tao</surname><given-names>L</given-names></name></person-group><article-title>Histone demethylase JARID1B promotes cell proliferation but is downregulated by N-Myc oncoprotein</article-title><source>Oncol Rep</source><volume>31</volume><fpage>1935</fpage><lpage>1939</lpage><year>2014</year><pub-id pub-id-type="doi">10.3892/or.2014.3006</pub-id><pub-id pub-id-type="pmid">24481781</pub-id></element-citation></ref>
<ref id="b41-ol-24-04-13485"><label>41</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname><given-names>J</given-names></name><name><surname>An</surname><given-names>X</given-names></name><name><surname>Han</surname><given-names>Y</given-names></name><name><surname>Ma</surname><given-names>R</given-names></name><name><surname>Yang</surname><given-names>K</given-names></name><name><surname>Zhang</surname><given-names>L</given-names></name><name><surname>Chi</surname><given-names>J</given-names></name><name><surname>Li</surname><given-names>W</given-names></name><name><surname>Llobet-Navas</surname><given-names>D</given-names></name><name><surname>Xu</surname><given-names>Y</given-names></name><name><surname>Jiang</surname><given-names>Y</given-names></name></person-group><article-title>Overexpression of JARID1B promotes differentiation via SHIP1/AKT signaling in human hypopharyngeal squamous cell carcinoma</article-title><source>Cell Death Dis</source><volume>7</volume><fpage>e2358</fpage><year>2016</year><pub-id pub-id-type="doi">10.1038/cddis.2016.262</pub-id><pub-id pub-id-type="pmid">27584795</pub-id></element-citation></ref>
<ref id="b42-ol-24-04-13485"><label>42</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>YQ</surname><given-names>H</given-names></name><name><surname>Y</surname><given-names>Z</given-names></name><name><surname>RJ</surname><given-names>Z</given-names></name><name><surname>XD</surname><given-names>M</given-names></name></person-group><article-title>Down-regulation of JARID1B expression inhibits cell proliferation, induces apoptosis and blocks cell cycle in human acute lymphoblastic leukemia cells</article-title><source>Eur Rev Med Pharmacol Sci</source><volume>22</volume><fpage>1366</fpage><lpage>1373</lpage><year>2018</year><pub-id pub-id-type="pmid">29565495</pub-id></element-citation></ref>
<ref id="b43-ol-24-04-13485"><label>43</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Shigekawa</surname><given-names>Y</given-names></name><name><surname>Hayami</surname><given-names>S</given-names></name><name><surname>Ueno</surname><given-names>M</given-names></name><name><surname>Miyamoto</surname><given-names>A</given-names></name><name><surname>Suzaki</surname><given-names>N</given-names></name><name><surname>Kawai</surname><given-names>M</given-names></name><name><surname>Hirono</surname><given-names>S</given-names></name><name><surname>Okada</surname><given-names>KI</given-names></name><name><surname>Hamamoto</surname><given-names>R</given-names></name><name><surname>Yamaue</surname><given-names>H</given-names></name></person-group><article-title>Overexpression of KDM5B/JARID1B is associated with poor prognosis in hepatocellular carcinoma</article-title><source>Oncotarget</source><volume>9</volume><fpage>34320</fpage><lpage>34335</lpage><year>2018</year><pub-id pub-id-type="doi">10.18632/oncotarget.26144</pub-id><pub-id pub-id-type="pmid">30344945</pub-id></element-citation></ref>
<ref id="b44-ol-24-04-13485"><label>44</label><element-citation publication-type="journal"><person-group person-group-type="author"><name><surname>Yang</surname><given-names>Z</given-names></name><name><surname>Xu</surname><given-names>JX</given-names></name><name><surname>Fang</surname><given-names>DP</given-names></name><name><surname>Ke</surname><given-names>J</given-names></name></person-group><article-title>Analysis of key genes reveal lysine demethylase 5B promotes prostate cancer progression</article-title><source>Oncol Lett</source><volume>20</volume><fpage>62</fpage><year>2020</year><pub-id pub-id-type="pmid">32863895</pub-id></element-citation></ref>
</ref-list>
</back>
<floats-group>
<fig id="f1-ol-24-04-13485" position="float">
<label>Figure 1.</label>
<caption><p>KDM5B is downregulated in resistant neuroblastoma cell line. (A) MTT assay results indicated cytotoxicity of CDDP after 48 h. UKF-NB-4 has a IC<sub>50</sub> 37.5&#x00B1;1.9 and CDDP resistant UKF-NB-4<sup>CDDP</sup> has IC<sub>50</sub> 150&#x00B1;12.5. Expression levels of KDM5B mRNA and protein were detected using (B) reverse transcription-quantitative PCR and (C) western blotting in UKF-NB-4 (NB4) and CDDP resistant UKF-NB-4<sup>CDDP</sup> (NB4CD) cell lines. (D) Quantification of western blotting. Average and standard error from three independent experiments are shown. &#x002A;P&#x003C;0.05, &#x002A;&#x002A;P&#x003C;0.01 compared with UKF-NB-4 cultured in the absence of CDDP (NB4). KDM5B, lysine-specific demethylase 5B; CDDP, cisplatin.</p></caption>
<graphic xlink:href="ol-24-04-13485-g00.jpg"/>
</fig>
<fig id="f2-ol-24-04-13485" position="float">
<label>Figure 2.</label>
<caption><p>KDM5B-knockdown reduces KDM5B expression and upregulates histone H3K4 trimethylation in neuroblastoma cells. (A) Reverse transcription-quantitative PCR showed decrease in expression of <italic>KDM5B</italic> in UKF-NB-4 and UKF-NB-4<sup>CDDP</sup> cells transfected with siKDM5B compared with siNC. (B) Lower expression of KDM5B protein after siKDM5B transfection was detected using flow cytometry. (C) Flow cytometry also showed an increase of H3K4me3 after siKDM5B transfection. &#x002A;P&#x003C;0.05, &#x002A;&#x002A;P&#x003C;0.01 and &#x002A;&#x002A;&#x002A;P&#x003C;0.001, NB4 and NB4CD cell lines were compared with their siNC control. KDM5B, lysine-specific demethylase 5B; CDDP, cisplatin; H3K4me3, tri-methylation of histone H3 at lysine 4; H3K4, lysine 3 of histone H3; si, short-interfering RNA; NC, negative control.</p></caption>
<graphic xlink:href="ol-24-04-13485-g01.jpg"/>
</fig>
<fig id="f3-ol-24-04-13485" position="float">
<label>Figure 3.</label>
<caption><p>KDM5B-knockdown promotes cell proliferation and migration in resistant cell lines. (A) Proliferation was assayed using xCELLigence system after <italic>KDM5B</italic> downregulation in UKF-NB-4 and UKF-NB-4<sup>CDDP</sup> cells. (B) Result of wound healing assay in UKF-NB-4 and UKF-NB-4<sup>CDDP</sup> cells after <italic>KDM5B</italic>-knockdown demonstrated increased cell migration in resistant cell line after <italic>KDM5B</italic>-knockdown. Representative images taken immediately, 24 and 48 h after the wounding. (C) Viability of UKF-NB-4 and UKF-NB-4<sup>CDDP</sup> cells after <italic>KDM5B</italic>-knockdown and 48 h cisplatin treatment was measured using PrestoBlue. &#x002A;P&#x003C;0.05 and &#x002A;&#x002A;P&#x003C;0.01 compared with the control si-NC group or where indicated using umbrella lines. KDM5B, lysine-specific demethylase 5; CDDP, cisplatin; NC, negative control; si, short-interfering RNA.</p></caption>
<graphic xlink:href="ol-24-04-13485-g02.jpg"/>
</fig>
<fig id="f4-ol-24-04-13485" position="float">
<label>Figure 4.</label>
<caption><p>KDM5B-knockdown increases cell cycle S phase in resistant cell line. Flow cytometry results, showing cell cycle distribution in UKF-NB-4 (NB4) and UKF-NB-4<sup>CDDP</sup> (NB4CD) cells after <italic>KDM5B</italic>-knockdown. &#x002A;P&#x003C;0.05 compared with S phase in the siNC group. KDM5B, lysine-specific demethylase 5B.</p></caption>
<graphic xlink:href="ol-24-04-13485-g03.jpg"/>
</fig>
</floats-group>
</article>
