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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">MCO</journal-id>
<journal-title-group>
<journal-title>Molecular and Clinical Oncology</journal-title>
</journal-title-group>
<issn pub-type="ppub">2049-9450</issn>
<issn pub-type="epub">2049-9469</issn>
<publisher>
<publisher-name>D.A. Spandidos</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">MCO-23-5-02896</article-id>
<article-id pub-id-type="doi">10.3892/mco.2025.2896</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Articles</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>Prolonged exposure to axitinib alters the molecular profile of Caki-2 renal cell carcinoma cells</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Nakayama</surname><given-names>Yuko</given-names></name>
<xref rid="af1-MCO-23-5-02896" ref-type="aff">1</xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Ino</surname><given-names>Aya</given-names></name>
<xref rid="af2-MCO-23-5-02896" ref-type="aff">2</xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Yamamoto</surname><given-names>Kazuhiro</given-names></name>
<xref rid="af3-MCO-23-5-02896" ref-type="aff">3</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Takara</surname><given-names>Kohji</given-names></name>
<xref rid="af2-MCO-23-5-02896" ref-type="aff">2</xref>
<xref rid="c1-MCO-23-5-02896" ref-type="corresp"/>
</contrib>
</contrib-group>
<aff id="af1-MCO-23-5-02896"><label>1</label>Department of Clinical Pharmaceutics, Faculty of Pharmaceutical Sciences, Himeji Dokkyo University, Himeji, Hyogo 670-8524, Japan</aff>
<aff id="af2-MCO-23-5-02896"><label>2</label>Department of Pharmaceutics and Pharmaceutical Technology, Faculty of Pharmaceutical Sciences, Hyogo Medical University, Kobe, Hyogo 650-8530, Japan</aff>
<aff id="af3-MCO-23-5-02896"><label>3</label>Department of Integrated Clinical and Basic Pharmaceutical Sciences, Faculty of Medicine, Dentistry and Pharmaceutical Sciences, Okayama University, Okayama 700-8558, Japan</aff>
<author-notes>
<corresp id="c1-MCO-23-5-02896"><italic>Correspondence to:</italic> Professor Kohji Takara, Department of Pharmaceutics and Pharmaceutical Technology, Faculty of Pharmaceutical Sciences, Hyogo Medical University, 1-3-6 Minatojima, Chuo, Kobe, Hyogo 650-8530, Japan <email>ko-takara@hyo-med.ac.jp</email></corresp>
</author-notes>
<pub-date pub-type="collection"><month>11</month><year>2025</year></pub-date>
<pub-date pub-type="epub"><day>22</day><month>09</month><year>2025</year></pub-date>
<volume>23</volume>
<issue>5</issue>
<elocation-id>101</elocation-id>
<history>
<date date-type="received">
<day>13</day>
<month>05</month>
<year>2025</year>
</date>
<date date-type="accepted">
<day>05</day>
<month>09</month>
<year>2025</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright: &#x00A9; 2025 Nakayama et al.</copyright-statement>
<copyright-year>2025</copyright-year>
<license license-type="open-access">
<license-p>This is an open access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by-nc-nd/4.0/">Creative Commons Attribution-NonCommercial-NoDerivs License</ext-link>, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.</license-p></license>
</permissions>
<abstract>
<p>Axitinib, an oral second-generation multitargeted tyrosine kinase inhibitor, is used as a second-line treatment for metastatic renal cell carcinoma (RCC). However, patients often develop resistance after initial responsiveness, necessitating the elucidation of the underlying resistance mechanisms. Therefore, the present study aimed to investigate the mechanisms underlying axitinib resistance using the Caki-2 human papillary RCC model cells. Cells tolerating 0.1 &#x00B5;M axitinib were designated as Caki/AX cells. Cell viability was assessed using the water-soluble tetrazolium salt assay. Notably, the 50&#x0025; inhibitory concentration (IC<sub>50</sub>) values of axitinib and sunitinib were significantly higher in Caki/AX cells than those in Caki-2 cells, indicating 2.83- and 1.2-fold resistance, respectively. By contrast, the IC<sub>50</sub> values of sorafenib and erlotinib were decreased in Caki/AX cells. Moreover, Caki/AX cells showed resistance to everolimus, temsirolimus and rapamycin, and decreased sensitivity to vinblastine, vincristine, paclitaxel, doxorubicin and SN-38 compared with Caki-2 cells. Notably, etoposide, 5-fluorouracil, cisplatin and carboplatin sensitivities were comparable in both cell types. Reverse transcription-quantitative polymerase chain reaction (PCR) analysis revealed that the mRNA levels of the ATP-binding cassette subfamily B member 1 and subfamily G member 2 were significantly higher in Caki/AX cells than those in Caki-2 cells. A PCR array related to vascular endothelial growth factor signalling showed that the mRNA levels of <italic>FIGF</italic> (also known as vascular endothelial growth factor D) and sphingosine kinase 1 were upregulated, whereas those of Rac family small GTPase 2 were downregulated in Caki/AX cells. Overall, these findings suggested that the upregulation of the ATP-binding cassette subfamily B member 1, <italic>FIGF</italic> and sphingosine kinase 1 mRNA levels, and downregulation of the Rac family small GTPase 2 mRNA levels may contribute to acquired resistance in Caki/AX cells.</p>
</abstract>
<kwd-group>
<kwd>axitinib</kwd>
<kwd>renal cell carcinoma</kwd>
<kwd>drug resistance</kwd>
<kwd>ABC transporter</kwd>
</kwd-group>
<funding-group>
<funding-statement><bold>Funding:</bold> No funding was received.</funding-statement>
</funding-group>
</article-meta>
</front>
<body>
<sec sec-type="intro">
<title>Introduction</title>
<p>Renal cell carcinoma (RCC) is among the most resistant variety of cancer showing resistance to conventional cytotoxic chemotherapy. Cytokine therapy was the standard treatment for RCC until 2006. However, development of various molecular-targeted drugs, such as vascular endothelial growth factor (VEGF) receptor (VEGFR) tyrosine kinase inhibitors (TKIs) and mammalian target of rapamycin (mTOR) inhibitors, significantly improved metastatic RCC treatment (<xref rid="b1-MCO-23-5-02896 b2-MCO-23-5-02896 b3-MCO-23-5-02896" ref-type="bibr">1-3</xref>).</p>
<p>Axitinib, an oral second-generation multitargeted TKI targeting VEGFR-1, -2, and -3 was approved by the US Food and Drug Administration in 2012 (<xref rid="b4-MCO-23-5-02896 b5-MCO-23-5-02896 b6-MCO-23-5-02896" ref-type="bibr">4-6</xref>). Currently, it is used as a second-line treatment for metastatic RCC (<xref rid="b7-MCO-23-5-02896 b8-MCO-23-5-02896 b9-MCO-23-5-02896" ref-type="bibr">7-9</xref>); however, information on its third-line or later treatment use remains scarce. Approximately one-third of patients with RCC exhibit TKI resistance in clinical trials (<xref rid="b10-MCO-23-5-02896" ref-type="bibr">10</xref>). Drug resistance can develop in initially responsive patients typically one year after treatment, thereby complicating advanced RCC management with TKIs (<xref rid="b11-MCO-23-5-02896" ref-type="bibr">11</xref>). Therefore, understanding the mechanism underlying axitinib in the second-line and later settings is important for effective treatment.</p>
<p>Targeted therapy resistance is of two types: intrinsic and acquired. Intrinsic resistance refers to the immediate ineffectiveness of therapeutic agents, often due to pre-existing resistant tumour clones formed via inherited resistance or evolutionary clonal selection. In contrast, acquired resistance is observed when tumours regrow following initial regression despite continued therapy. Although the precise mechanisms of resistance to targeted therapies remain unclear, both laboratory and clinical studies have identified several factors contributing to intrinsic and acquired resistance (<xref rid="b12-MCO-23-5-02896" ref-type="bibr">12</xref>).</p>
<p>We previously established everolimus-resistant papillary RCC (PRCC) cells exhibiting cross-resistance to other mTOR inhibitors, decreased mTOR activity, and downregulated mRNA levels of DNA damage-inducible transcript 4 (<italic>DDIT4)</italic>, DEP domain-containing mTOR-interacting protein (<italic>DEPTOR)</italic>, hypoxia-inducible factor 1 subunit alpha (<italic>HIF1A)</italic>, and phospholipase D1 (<italic>PLD1)</italic>, which possibly contributed to everolimus resistance (<xref rid="b13-MCO-23-5-02896" ref-type="bibr">13</xref>). mRNA levels of ATP-binding cassette (ABC) transporter <italic>ABCB1</italic> mRNA are downregulated in everolimus-resistant PRCC cells after long-term everolimus exposure (<xref rid="b14-MCO-23-5-02896" ref-type="bibr">14</xref>). However, effects of long-term exposure to axitinib remain unknown. Therefore, in this study, we aimed to elucidate axitinib resistance mechanisms using PRCC cells by generating axitinib-resistant PRCC cells and comparing their molecular characteristics with those of parental PRCC cells.</p>
</sec>
<sec sec-type="Materials|methods">
<title>Materials and methods</title>
<sec>
<title/>
<sec>
<title>Chemicals</title>
<p>Axitinib, sunitinib, temsirolimus, and 5-fluorouracil were purchased from Sigma-Aldrich; Merck KGaA. Everolimus and rapamycin were obtained from Selleck Chemicals, LLC and LC Laboratories, respectively. Erlotinib, sorafenib, and SN-38 (active metabolite of irinotecan hydrochloride) were purchased from LKT Laboratories Inc. Carboplatin, cisplatin, doxorubicin hydrochloride, etoposide, paclitaxel, vinblastine sulphate, and vincristine sulphate were purchased from FUJIFILM Wako Pure Chemical Corp. Water-soluble tetrazolium salt (WST)-1 and 1-methoxy phenazinium methylsulphate (PMS) were obtained from Dojindo Laboratories.</p>
</sec>
<sec>
<title>Cells and cell culture</title>
<p>Caki-2 cells (RRID:CVCL_0235; DS Pharma Biomedical) were used as human PRCC model cells (<xref rid="b13-MCO-23-5-02896 b14-MCO-23-5-02896 b15-MCO-23-5-02896" ref-type="bibr">13-15</xref>). Short tandem repeat-polymerase chain reaction-PCR profiling using the PowerPlex 16 System (Promega Corp.) confirmed that the cell used in this study was the same as the cell registered in DSMZ (ACC-54 CAKI-2), and the cell registered in ATCC (HTB-47 Caki-2), by the comparison with the database of JCRB Cell Bank. The cells were subsequently cultured in the Roswell Park Memorial Institute (RPMI)-1640 medium (Invitrogen, Life Technologies) supplemented with 10&#x0025; heat-inactivated foetal bovine serum (Invitrogen, Life Technologies) and 100 IU/ml penicillin + 100 &#x00B5;g/ml streptomycin (Invitrogen, Life Technologies) in a humidified atmosphere containing 95&#x0025; air and 5&#x0025; CO<sub>2</sub> at 37&#x02DA;C. The cells were sub-cultured every 3-4 d using 0.05&#x0025; trypsin-0.02&#x0025; ethylenediaminetetraacetic acid (Invitrogen, Life Technologies).</p>
</sec>
<sec>
<title>Establishment of axitinib-resistant sublines</title>
<p>Clinically achievable plasma concentration of axitinib at 10 mg is approximately 30 ng/ml (equivalent to approximately 0.08 &#x00B5;M) (<xref rid="b16-MCO-23-5-02896 b17-MCO-23-5-02896 b18-MCO-23-5-02896" ref-type="bibr">16-18</xref>). Caki-2 cells were cultured in RPMI-1640 medium supplemented with 0.1 &#x00B5;M axitinib. After three months, the cells tolerating 0.1 &#x00B5;M axitinib were isolated and cloned, and the selected clones were named as Caki/AX cells. Caki/AX cells were maintained under conditions similar to those used for Caki-2 cells, except that the medium contained 0.1 &#x00B5;M axitinib.</p>
</sec>
<sec>
<title>Cell growth assay</title>
<p>Caki-2 and Caki/AX cell growth was evaluated using growth curves. On day 0, the cells (1,000 cells/well) were seeded in a 96-well plate in a culture medium without axitinib and counted from day 0 to 12. The cell counts were determined via WST-1 colorimetric assay based on the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide assay, as previously described (<xref rid="b13-MCO-23-5-02896" ref-type="bibr">13</xref>,<xref rid="b19-MCO-23-5-02896" ref-type="bibr">19</xref>,<xref rid="b20-MCO-23-5-02896" ref-type="bibr">20</xref>). Three hours after the addition of the WST-1 reagent solution, absorbance at 450 nm and a reference wavelength of 630 nm was determined using the Spectra Fluor microplate reader (Tecan Group, Ltd.), according to the manufacturer&#x0027;s instructions. Preliminary experiments revealed a proportional relationship between the absorbance and cell number. Log phase doubling time of Caki-2 and Caki/AX cells were calculated as previously described (<xref rid="b13-MCO-23-5-02896" ref-type="bibr">13</xref>,<xref rid="b19-MCO-23-5-02896" ref-type="bibr">19</xref>,<xref rid="b20-MCO-23-5-02896" ref-type="bibr">20</xref>).</p>
</sec>
<sec>
<title>Growth inhibition assay</title>
<p>Effects of molecular targeted and cytotoxic anticancer drugs on Caki-2 and Caki/AX cell growth were evaluated using the WST-1 assay as previously described (<xref rid="b13-MCO-23-5-02896" ref-type="bibr">13</xref>,<xref rid="b14-MCO-23-5-02896" ref-type="bibr">14</xref>,<xref rid="b19-MCO-23-5-02896 b20-MCO-23-5-02896 b21-MCO-23-5-02896 b22-MCO-23-5-02896" ref-type="bibr">19-22</xref>). To examine the effects of molecular targeted drugs, the cells were initially seeded at a density of 500 cells/well in a 96-well plate without any drugs. After 24 h of pre-culture, the medium was replaced with a fresh medium containing various concentrations of the tested molecular targeted drugs. After 168 h of incubation, cell counts were determined via WST-1 assay.</p>
<p>To examine the effects of cytotoxic anticancer drugs, the cells were seeded at a density of 1,000 cells/well, and drug exposure time was 72 h. All other experimental conditions were identical to those described above. Subsequently, 50&#x0025; inhibitory concentration (IC<sub>50</sub>) values of the tested drugs were estimated using the sigmoid inhibitory effect model, as previously described (<xref rid="b13-MCO-23-5-02896" ref-type="bibr">13</xref>,<xref rid="b14-MCO-23-5-02896" ref-type="bibr">14</xref>,<xref rid="b19-MCO-23-5-02896 b20-MCO-23-5-02896 b21-MCO-23-5-02896 b22-MCO-23-5-02896" ref-type="bibr">19-22</xref>).</p>
</sec>
<sec>
<title>Reverse transcription-quantitative PCR (RT-qPCR)</title>
<p>Next, mRNA expression levels of the ABC transporters, <italic>ABCB1</italic> and <italic>ABCG2</italic>, were measured via RT-qPCR. Total RNA was extracted from Caki-2 and Caki/AX cells using the GenElute Mammalian Total RNA Miniprep kit (Sigma-Aldrich; Merck KGaA), and an aliquot (500 ng) was used for reverse transcription using the PrimeScript RT reagent kit (Takara Bio Inc.). Reverse transcription reaction was performed at 37&#x02DA;C for 15 min and terminated via heating at 85&#x02DA;C for 5 sec, followed by cooling at 4&#x02DA;C.</p>
<p>Real-time PCR was performed using the 7500 Fast Real-Time PCR system (Applied Biosystems) and SYBR Premix Ex Taq (Takara Bio). PCR cycling conditions were as follows: 95&#x02DA;C for 30 sec, followed by 40 cycles of 95&#x02DA;C for 3 sec and 60&#x02DA;C for 30 sec. Dissociation curve analysis was performed via heating at 95&#x02DA;C for 15 sec followed by 60&#x02DA;C for 1 min, and 95&#x02DA;C for 15 sec. All PCR primers used in this study are listed in <xref rid="SD3-MCO-23-5-02896" ref-type="supplementary-material">Table SI</xref> (<xref rid="b13-MCO-23-5-02896" ref-type="bibr">13</xref>,<xref rid="b14-MCO-23-5-02896" ref-type="bibr">14</xref>,<xref rid="b20-MCO-23-5-02896" ref-type="bibr">20</xref>). Primers were synthesised by GeneDesign, Inc. &#x03B2;-actin was used as an internal standard. The comparative Cq method was used to determine the relative target mRNA levels (<xref rid="b13-MCO-23-5-02896" ref-type="bibr">13</xref>,<xref rid="b14-MCO-23-5-02896" ref-type="bibr">14</xref>,<xref rid="b20-MCO-23-5-02896" ref-type="bibr">20</xref>,<xref rid="b23-MCO-23-5-02896" ref-type="bibr">23</xref>,<xref rid="b24-MCO-23-5-02896" ref-type="bibr">24</xref>).</p>
</sec>
<sec>
<title>PCR array</title>
<p>PCR array was performed using the RT<sup>2</sup> Profiler PCR Array (catalogue No. PAHS-091Z; Qiagen), as previously described (<xref rid="b13-MCO-23-5-02896" ref-type="bibr">13</xref>). Total RNA was extracted as described above, and an aliquot (500 ng of total RNA) was used for reverse transcription with the RT<sup>2</sup> First Strand kit (Qiagen), according to the manufacturer&#x0027;s instructions. Real-time PCR was performed using the 7500 Fast Real-Time PCR System (Applied Biosystems) and RT<sup>2</sup> SYBR-Green Master Mix (Qiagen). PCR conditions were as follows: 95&#x02DA;C for 10 min, followed by 40 cycles of 95&#x02DA;C for 15 sec, and 60&#x02DA;C for 1 min. Dissociation was initiated at 95&#x02DA;C for 15 sec, followed by 60&#x02DA;C for 1 min, and 95&#x02DA;C for 15 sec. The data were analysed using the 2<sup>-&#x0394;&#x0394;Cq</sup> method (<xref rid="b25-MCO-23-5-02896" ref-type="bibr">25</xref>).</p>
</sec>
<sec>
<title>Statistical analyses</title>
<p>Two groups were compared using an unpaired Student&#x0027;s t-test with the JMP Pro 15.2.0. software (SAS Institute Japan Ltd.). P&#x003C;0.05 (two-tailed) was considered to indicate a statistically significant difference.</p>
</sec>
</sec>
</sec>
<sec sec-type="Results">
<title>Results</title>
<sec>
<title/>
<sec>
<title>Caki-2 and Caki/AX cell growth curves</title>
<p>Growth curves of Caki-2 and Caki/AX cells revealed a logarithmic phase that continued for at least six days after cell seeding (<xref rid="f1-MCO-23-5-02896" ref-type="fig">Fig. 1</xref>). The cell doubling time were approximately 24.2 and 24.4 h for Caki-2 and Caki/AX cells, respectively. Notably, growth rates were comparable in both cell types.</p>
</sec>
<sec>
<title>Cell sensitivities to TKIs and mTOR inhibitors</title>
<p><xref rid="tI-MCO-23-5-02896" ref-type="table">Table I</xref> shows the IC<sub>50</sub> values of the tested TKIs in Caki-2 and Caki/AX cells. IC<sub>50</sub> value of axitinib was significantly high in Caki/AX cells, showing 2.83-fold resistance. Similarly, IC<sub>50</sub> value of sunitinib was significantly higher in Caki/AX cells than in Caki-2 cells, with Caki/AX cells showing a 1.2-fold higher resistance than Caki-2 cells. In contrast, IC<sub>50</sub> values of sorafenib and erlotinib were lower in Caki/AX cells than in Caki-2 cells; however, the difference was not significant.</p>
<p>IC<sub>50</sub> values of the tested mTOR inhibitors in Caki-2 and Caki/AX cells are presented in <xref rid="tII-MCO-23-5-02896" ref-type="table">Table II</xref>. Their IC<sub>50</sub> values were higher in Caki/AX cells than in Caki-2 cells, with the relative resistance to mTOR inhibitors being approximately 10-fold.</p>
</sec>
<sec>
<title>Cell sensitivities to cytotoxic anticancer drugs</title>
<p>IC<sub>50</sub> values of the tested cytotoxic anticancer drugs in Caki-2 and Caki/AX cells are presented in <xref rid="tIII-MCO-23-5-02896" ref-type="table">Table III</xref>. Vinblastine, vincristine, paclitaxel, and doxorubicin sensitivities were lower in Caki/AX cells than in Caki-2 cells. SN-38 sensitivity was decreased, but not significantly, in Caki/AX cells. Notably, etoposide, 5-fluorouracil, cisplatin, and carboplatin sensitivities were comparable between Caki-2 and Caki/AX cells.</p>
</sec>
<sec>
<title>ABCB1 and ABCG2 mRNA expression levels</title>
<p><italic>ABCB1</italic> and <italic>ABCG2</italic> mRNA levels were significantly higher in Caki/AX cells than in Caki-2 cells (<xref rid="f2-MCO-23-5-02896" ref-type="fig">Fig. 2</xref>).</p>
</sec>
<sec>
<title>PCR array</title>
<p>Next, mRNA levels of molecules associated with VEGF-related signalling pathways were analysed using a PCR array (<xref rid="f3-MCO-23-5-02896" ref-type="fig">Fig. 3</xref>). Volcano plot showed the mRNAs up- or downregulated in Caki/AX cells compared to those in Caki-2 cells. Notably, mRNA levels of <italic>FIGF</italic> (also known as <italic>VEGFD</italic>) and sphingosine kinase 1 (<italic>SPHK1</italic>) were upregulated &#x2265; 2-fold, whereas those of Rac family small GTPase 2 (<italic>RAC2</italic>) were downregulated &#x003E;2-fold in Caki/AX cells (<xref rid="tIV-MCO-23-5-02896" ref-type="table">Table IV</xref>).</p>
<p>Additionally, mRNA levels of <italic>VEGFA</italic> (<xref rid="SD1-MCO-23-5-02896" ref-type="supplementary-material">Fig. S1</xref>) and cadherin 1 (<xref rid="SD2-MCO-23-5-02896" ref-type="supplementary-material">Fig. S2</xref>), which encodes the calcium-dependent cell-cell adhesion protein E-cadherin, were significantly lower in Caki/AX cells than in Caki-2 cells.</p>
</sec>
</sec>
</sec>
<sec sec-type="Discussion">
<title>Discussion</title>
<p>Target gene mutations reducing the drug affinity for target molecules are involved in TKI resistance mechanisms. Activation of bypass signalling pathways also contributes to TKI resistance. Other resistance mechanisms include lysosomal sequestration of TKIs, activation of angiogenic switches, and involvement of ABC transporters (<xref rid="b12-MCO-23-5-02896" ref-type="bibr">12</xref>). However, the specific mechanisms underlying axitinib resistance remain unclear. Therefore, in this study, axitinib-resistant PRCC cells were generated and molecularly compared with their parental cells to elucidate the underlying resistance mechanisms.</p>
<p>Axitinib-resistant Caki/AX cells exhibited cell growth comparable to that of their parental Caki-2 cells, with equivalent doubling time of 24.2 and 24.4 h for Caki-2 and Caki/AX cells, respectively. Moreover, continuous exposure to axitinib did not affect cell growth, suggesting that changes in cell growth do not contribute to the development of drug resistance in Caki/AX cells.</p>
<p>Caki/AX cells exhibited significantly lower sensitivity to axitinib than Caki-2 cells, with approximately 3-fold resistance. This suggests that long-term exposure to 0.1 &#x00B5;M axitinib, equivalent to the plasma concentrations achieved with clinical dosing, induces resistance in these cells. Additionally, Caki/AX cells showed cross-resistance to sunitinib, but not sorafenib and erlotinib. They exhibited altered sensitivity to TKIs; however, the specific factors responsible for this could not be identified in this study. Sensitivity to mTOR inhibitors was also reduced in Caki/AX cells, indicating the development of cross-resistance to mTOR inhibitors.</p>
<p>Caki/AX cells were resistant to vinblastine, vincristine, paclitaxel, and doxorubicin. These cytotoxic anticancer drugs are substrates of ABCB1, also known as P-glycoprotein (<xref rid="b19-MCO-23-5-02896" ref-type="bibr">19</xref>,<xref rid="b21-MCO-23-5-02896" ref-type="bibr">21</xref>). <italic>ABCB1</italic> mRNA levels were higher in Caki/AX cells than in Caki-2 cells, suggesting that drug resistance is induced by <italic>ABCB1</italic> mRNA upregulation. Axitinib and sunitinib also act as ABCB1 substrates (<xref rid="b26-MCO-23-5-02896 b27-MCO-23-5-02896 b28-MCO-23-5-02896 b29-MCO-23-5-02896" ref-type="bibr">26-29</xref>); therefore, resistance to these drugs was partially due to the upregulation of <italic>ABCB1</italic> mRNA levels in this study. Furthermore, moderate resistance to SN-38, an active irinotecan metabolite, was observed, possibly due to <italic>ABCG2</italic> mRNA upregulation because SN-38 is a substrate of ABCG2(<xref rid="b22-MCO-23-5-02896" ref-type="bibr">22</xref>).</p>
<p>Volcano plot revealed increased <italic>FIGF</italic> and <italic>SPHK1</italic> mRNA levels and decreased <italic>RAC2</italic> mRNA levels in Caki/AX cells. <italic>FIGF</italic> encodes a c-fos-induced growth factor, also known as VEGFD. Lieu <italic>et al</italic> (<xref rid="b30-MCO-23-5-02896" ref-type="bibr">30</xref>) reported increased VEGFD levels after bevacizumab chemotherapy, suggesting their association with bevacizumab chemotherapy resistance. Therefore, axitinib resistance may be partially due to the upregulation of <italic>FIGF</italic> levels, despite bevacizumab being a human monoclonal VEGFA-neutralising antibody. Here, mRNA levels of <italic>VEGFA</italic> and <italic>VEGFC</italic> were decreased in Caki/AX cells, indicating an association between reduced VEGF levels and axitinib resistance in Caki/AX cells.</p>
<p>SPHK1, encoded by <italic>SPHK1</italic>, acts as a proto-oncogenic factor synthesizing sphingosine-1 phosphate (S1P). Tumour cells often exhibit elevated levels of S1P and its receptor, S1PR1, which promotes drug resistance. Signalling through S1P <italic>via</italic> its receptor, S1PR1, facilitates cancer cell survival by activating anti-apoptotic pathways (<xref rid="b31-MCO-23-5-02896" ref-type="bibr">31</xref>). Therefore, targeting S1P and its receptors can potentially inhibit cancer cell proliferation and overcome drug resistance (<xref rid="b31-MCO-23-5-02896" ref-type="bibr">31</xref>). Bao <italic>et al</italic> (<xref rid="b32-MCO-23-5-02896" ref-type="bibr">32</xref>) reported that SPHK1 overexpression is associated with RCC development and resistance to antiangiogenic agents. Elevated SPHK1 levels predicts poor outcomes and resistance to angiogenic agents in patients with RCC. These findings indicate the potential role of SPHK1 in axitinib resistance in Caki/AX cells.</p>
<p>RAC2 is a small GTPase contributing to B-cell receptor (BCR)-activated calcium mobilization via phospholipase C&#x03B3;2 (<xref rid="b33-MCO-23-5-02896 b34-MCO-23-5-02896 b35-MCO-23-5-02896" ref-type="bibr">33-35</xref>). It acts as a regulator of cell adhesion, linking BCR signalling pathways to cellular adhesion processes (<xref rid="b33-MCO-23-5-02896 b34-MCO-23-5-02896 b35-MCO-23-5-02896" ref-type="bibr">33-35</xref>). Its diverse functions are crucial for fundamental cellular physiological processes and immune responses (<xref rid="b33-MCO-23-5-02896" ref-type="bibr">33</xref>,<xref rid="b35-MCO-23-5-02896" ref-type="bibr">35</xref>). Shaffer <italic>et al</italic> (<xref rid="b35-MCO-23-5-02896" ref-type="bibr">35</xref>) reported the involvement of RAC2 in the resistance to the Bruton tyrosine kinase inhibitor, ibrutinib. Wu <italic>et al</italic> (<xref rid="b36-MCO-23-5-02896" ref-type="bibr">36</xref>) revealed that the reduction of RAC2 expression using RNA interference and clustered regularly interspaced palindromic repeat technology impairs cell adhesion and that its overexpression reverses ibrutinib-induced cell adhesion impairment. RNA-sequencing analysis has shown that ibrutinib-resistant cells exhibit higher RAC2 levels than their parental cells (<xref rid="b35-MCO-23-5-02896" ref-type="bibr">35</xref>). <italic>RAC2</italic> knockdown significantly reduces the levels of the signatures associated with the activated B-cell-diffuse large B-cell lymphoma identity, B-cell-specific genes repressed by B-lymphocyte-induced maturation protein-1, and genes induced by nuclear factor-&#x03BA;B, signal transducer and activator of transcription 3, and interferon regulatory factor 4. Although the direct involvement of RAC2 in axitinib resistance remains unclear, its downregulation possibly contributes to axitinib resistance.</p>
<p>Overall, this study showed that Caki/AX cells develop drug resistance via various mechanisms, including <italic>ABCB1</italic> mRNA upregulation. Our findings suggest that the upregulation of <italic>FIGF</italic> and <italic>SPHK1</italic> mRNA levels and downregulation of <italic>RAC2</italic> mRNA levels contribute to the acquired axitinib resistance of Caki/AX cells. These changes align with mechanisms previously reported in the literature, and particularly, the involvement of FIGF and SPHK1 suggests the possibility of resistance acquisition via angiogenic and sphingolipid-related pathways. Specifically, the decreased RAC2 expression is a novel finding of this study with limited prior documentation, indicating a potential cell line-specific molecular alteration. This investigation is based on a single cell line and remains a preliminary exploration. However, other factors may also be involved in axitinib resistance, warranting further gene expression analyses via next-generation sequencing. Additionally, mRNA levels of cadherin 1 were significantly lower in Caki/AX cells than in Caki-2 cells, suggesting the induction of epithelial-mesenchymal transition, consistent with a previous report (<xref rid="b37-MCO-23-5-02896" ref-type="bibr">37</xref>). This study used only a few cell lines <italic>in vitro</italic>, which possibly limits the generalisability and warrants the cautious interpretation of our findings. Therefore, further research incorporating additional models, including animal and clinical specimens, is necessary to fully validate and extend our observations.</p>
</sec>
<sec sec-type="supplementary-material">
<title>Supplementary Material</title>
<supplementary-material id="SD1-MCO-23-5-02896" content-type="local-data">
<caption>
<title>Vascular endothelial growth factor mRNA levels in Caki-2 and Caki/AX cells. Relative target gene level is expressed as 2<sup> &#x0394;Cq</sup>. &#x0394;Cq was calculated by subtracting the Cq of the internal standard (&#x03B2;-actin) from that of the target gene. Open (&#x25A1;) and closed (&#x25A0;) bars indicate the Caki-2 and Caki/AX cells, respectively. Each bar represents the mean &#x00B1; standard deviation (n=4). <sup>&#x002A;&#x002A;</sup>P&#x003C;0.01 (unpaired Student&#x0027;s t-test).</title>
</caption>
<media mimetype="application" mime-subtype="pdf" xlink:href="Supplementary_Data1.pdf"/>
</supplementary-material>
<supplementary-material id="SD2-MCO-23-5-02896" content-type="local-data">
<caption>
<title>Cadherin 1 mRNA levels in Caki-2 and Caki/AX cells. Relative target gene expression is expressed as 2<sup>-&#x0394;Cq</sup>. &#x0394;Cq was calculated by subtracting the Cq of the internal standard (&#x03B2;-actin) from that of the target gene. Open (&#x25A1;) and closed (&#x25A0;) bars indicate the Caki-2 and Caki/AX cells, respectively. Each bar represents the mean &#x00B1; standard deviation (n=4). <sup>&#x002A;&#x002A;</sup>P&#x003C;0.01 (unpaired Student&#x0027;s t-test).</title>
</caption>
<media mimetype="application" mime-subtype="pdf" xlink:href="Supplementary_Data1.pdf"/>
</supplementary-material>
<supplementary-material id="SD3-MCO-23-5-02896" content-type="local-data">
<caption>
<title>Primer sequences for reverse transcription-quantitative polymerase chain reaction.</title>
</caption>
<media mimetype="application" mime-subtype="pdf" xlink:href="Supplementary_Data2.pdf"/>
</supplementary-material>
</sec>
</body>
<back>
<ack>
<title>Acknowledgements</title>
<p>Not applicable.</p>
</ack>
<sec sec-type="data-availability">
<title>Availability of data and materials</title>
<p>The data generated in the present study may be requested from the corresponding author.</p>
</sec>
<sec>
<title>Authors&#x0027; contributions</title>
<p>YN conceptualized the study, performed the investigation, compiled the data, generated the figures, and wrote the original draft. AI and KY generated the figures, collected and organized the data, and reviewed and edited the manuscript. KT conceptualized the study, curated all of the data, reviewed and edited the manuscript, and supervised the study. All authors read and approved the final manuscript.</p>
</sec>
<sec>
<title>Ethics approval and consent to participate</title>
<p>Not applicable.</p>
</sec>
<sec>
<title>Patient consent for publication</title>
<p>Not applicable.</p>
</sec>
<sec sec-type="COI-statement">
<title>Competing interest</title>
<p>The authors declare that they have no competing interests.</p>
</sec>
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<floats-group>
<fig id="f1-MCO-23-5-02896" position="float">
<label>Figure 1</label>
<caption><p>(A) Growth curves of Caki-2 and Caki/AX cells. Each cell line was seeded in a 96-well plate on day 0. Cell counts were determined using the water-soluble tetrazolium salt-1 assay from day 0 to 12. Symbols indicate the growth curves of Caki-2 (&#x25CB;) and Caki/AX (&#x25CF;) cells. Each point represents the mean &#x00B1; standard deviation of values from 12 independent experiments, and error bars are included in the symbols. (B) Microscopic images of Caki-2 and Caki/AX cells.</p></caption>
<graphic xlink:href="mco-23-05-02896-g00.tif"/>
</fig>
<fig id="f2-MCO-23-5-02896" position="float">
<label>Figure 2</label>
<caption><p><italic>ABCB1</italic> (left) and <italic>ABCG2</italic> (right) mRNA levels in Caki-2 and Caki/AX cells. Relative target gene expression is expressed as 2<sup>-&#x0394;Cq</sup>. &#x0394;Cq was calculated by subtracting the Cq of the internal standard (&#x03B2;-actin) from that of the target gene. Open (&#x25A1;) and closed (&#x25A0;) bars indicate the Caki-2 and Caki/AX cells, respectively. Each bar represents the mean &#x00B1; standard deviation (n=4). <sup>&#x002A;&#x002A;</sup>P&#x003C;0.01 (unpaired Student&#x0027;s t-test). <italic>ABC</italic>, ATP-binding cassette.</p></caption>
<graphic xlink:href="mco-23-05-02896-g01.tif"/>
</fig>
<fig id="f3-MCO-23-5-02896" position="float">
<label>Figure 3</label>
<caption><p>Volcano plot of the vascular endothelial growth factor-related signalling polymerase chain reaction array results in Caki-2 and Caki/AX cells. Graph shows Caki-2 vs. Caki/AX cells, and fold-difference indicates the normalized gene expression (2<sup>-&#x0394;Cq</sup>) in Caki/AX cells divided by that (2<sup>-&#x0394;Cq</sup>) in Caki-2 cells. Black line indicates a fold-difference of 1 in gene expression. Dotted line indicates a two-fold change in gene expression. Dashed-dotted line indicates a P-value threshold of 0.05, determined via the Student&#x0027;s t-test.</p></caption>
<graphic xlink:href="mco-23-05-02896-g02.tif"/>
</fig>
<table-wrap id="tI-MCO-23-5-02896" position="float">
<label>Table I</label>
<caption><p>Sensitivities of Caki-2 and Caki/AX cells to tyrosine kinase inhibitors.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="middle">&#x00A0;</th>
<th align="center" valign="middle" colspan="2">IC<sub>50</sub> value, &#x00B5;M</th>
<th align="center" valign="middle">&#x00A0;</th>
</tr>
<tr>
<th align="left" valign="middle">Drug</th>
<th align="center" valign="middle">Caki-2</th>
<th align="center" valign="middle">Caki/AX</th>
<th align="center" valign="middle">R.R.</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="middle">Axitinib</td>
<td align="center" valign="middle">3.92&#x00B1;1.39</td>
<td align="center" valign="middle">11.1&#x00B1;4.27<sup><xref rid="tfna-MCO-23-5-02896" ref-type="table-fn">a</xref></sup></td>
<td align="center" valign="middle">2.83</td>
</tr>
<tr>
<td align="left" valign="middle">Sorafenib</td>
<td align="center" valign="middle">3.65&#x00B1;0.24</td>
<td align="center" valign="middle">3.34&#x00B1;0.07<sup><xref rid="tfna-MCO-23-5-02896" ref-type="table-fn">a</xref></sup></td>
<td align="center" valign="middle">0.92</td>
</tr>
<tr>
<td align="left" valign="middle">Sunitinib</td>
<td align="center" valign="middle">2.84&#x00B1;0.22</td>
<td align="center" valign="middle">3.33&#x00B1;0.35<sup><xref rid="tfna-MCO-23-5-02896" ref-type="table-fn">a</xref></sup></td>
<td align="center" valign="middle">1.17</td>
</tr>
<tr>
<td align="left" valign="middle">Erlotinib</td>
<td align="center" valign="middle">0.44&#x00B1;0.30</td>
<td align="center" valign="middle">0.36&#x00B1;0.11</td>
<td align="center" valign="middle">0.81</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn><p>R.R. was obtained by dividing the IC<sub>50</sub> value of Caki/AX cells by that of Caki-2 cells. Each value represents the mean &#x00B1; standard deviation (n=8).</p></fn>
<fn id="tfna-MCO-23-5-02896"><p><sup>a</sup>P&#x003C;0.01 significantly different from Caki-2 cells (unpaired Student&#x0027;s t-test). R.R., relative resistance; IC<sub>50</sub>, 50&#x0025; inhibitory concentration.</p></fn>
</table-wrap-foot>
</table-wrap>
<table-wrap id="tII-MCO-23-5-02896" position="float">
<label>Table II</label>
<caption><p>Sensitivities of Caki-2 and Caki/AX cells to mammalian target of rapamycin inhibitors.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="middle">&#x00A0;</th>
<th align="center" valign="middle" colspan="2">IC<sub>50</sub> value, nM</th>
<th align="center" valign="middle">&#x00A0;</th>
</tr>
<tr>
<th align="left" valign="middle">Drug</th>
<th align="center" valign="middle">Caki-2</th>
<th align="center" valign="middle">Caki/AX</th>
<th align="center" valign="middle">R.R.</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="middle">Everolimus</td>
<td align="center" valign="middle">52.6&#x00B1;51.0</td>
<td align="center" valign="middle">653&#x00B1;620<sup><xref rid="tfn1-a-MCO-23-5-02896" ref-type="table-fn">a</xref></sup></td>
<td align="center" valign="middle">12.4</td>
</tr>
<tr>
<td align="left" valign="middle">Temsirolimus</td>
<td align="center" valign="middle">6.20&#x00B1;11.0</td>
<td align="center" valign="middle">92.2&#x00B1;84.3<sup><xref rid="tfn1-a-MCO-23-5-02896" ref-type="table-fn">a</xref></sup></td>
<td align="center" valign="middle">14.9</td>
</tr>
<tr>
<td align="left" valign="middle">Rapamycin</td>
<td align="center" valign="middle">62.5&#x00B1;55.6</td>
<td align="center" valign="middle">814&#x00B1;487<sup><xref rid="tfn1-b-MCO-23-5-02896" ref-type="table-fn">b</xref></sup></td>
<td align="center" valign="middle">13.0</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn><p>R.R. was obtained by dividing the IC<sub>50</sub> value of Caki/AX cells by that of Caki-2 cells. Each value represents the mean &#x00B1; standard deviation (n=6-8).</p></fn>
<fn id="tfn1-a-MCO-23-5-02896"><p><sup>a</sup>P&#x003C;0.05;</p></fn>
<fn id="tfn1-b-MCO-23-5-02896"><p><sup>b</sup>P&#x003C;0.01 significantly different from Caki-2 cells (unpaired Student&#x0027;s t<italic>-</italic>test). R.R., relative resistance; IC<sub>50</sub>, 50&#x0025; inhibitory concentration.</p></fn>
</table-wrap-foot>
</table-wrap>
<table-wrap id="tIII-MCO-23-5-02896" position="float">
<label>Table III</label>
<caption><p>Sensitivities of Caki-2 and Caki/AX cells to cytotoxic anticancer drugs.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="middle">&#x00A0;</th>
<th align="center" valign="middle" colspan="2">IC<sub>50</sub> value</th>
<th align="center" valign="middle">&#x00A0;</th>
</tr>
<tr>
<th align="left" valign="middle">Drug</th>
<th align="center" valign="middle">Caki-2</th>
<th align="center" valign="middle">Caki/AX</th>
<th align="center" valign="middle">R.R.</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="middle">Vinblastine, nM</td>
<td align="center" valign="middle">9.16&#x00B1;2.86</td>
<td align="center" valign="middle">29.1&#x00B1;9.00<sup><xref rid="tfn2-a-MCO-23-5-02896" ref-type="table-fn">a</xref></sup></td>
<td align="center" valign="middle">3.18</td>
</tr>
<tr>
<td align="left" valign="middle">Vincristine, nM</td>
<td align="center" valign="middle">13.5&#x00B1;2.06</td>
<td align="center" valign="middle">44.7&#x00B1;3.54<sup><xref rid="tfn2-a-MCO-23-5-02896" ref-type="table-fn">a</xref></sup></td>
<td align="center" valign="middle">3.31</td>
</tr>
<tr>
<td align="left" valign="middle">Paclitaxel, nM</td>
<td align="center" valign="middle">6.34&#x00B1;2.09</td>
<td align="center" valign="middle">26.6&#x00B1;8.00<sup><xref rid="tfn2-a-MCO-23-5-02896" ref-type="table-fn">a</xref></sup></td>
<td align="center" valign="middle">4.20</td>
</tr>
<tr>
<td align="left" valign="middle">Doxorubicin, nM</td>
<td align="center" valign="middle">149&#x00B1;110</td>
<td align="center" valign="middle">349&#x00B1;188<sup><xref rid="tfn2-a-MCO-23-5-02896" ref-type="table-fn">a</xref></sup></td>
<td align="center" valign="middle">2.34</td>
</tr>
<tr>
<td align="left" valign="middle">Etoposide, &#x00B5;M</td>
<td align="center" valign="middle">5.00&#x00B1;3.65</td>
<td align="center" valign="middle">4.75&#x00B1;2.85</td>
<td align="center" valign="middle">0.95</td>
</tr>
<tr>
<td align="left" valign="middle">SN-38, nM</td>
<td align="center" valign="middle">36.3&#x00B1;26.0</td>
<td align="center" valign="middle">72.2&#x00B1;47.9</td>
<td align="center" valign="middle">1.99</td>
</tr>
<tr>
<td align="left" valign="middle">5-fluorouracil, &#x00B5;M</td>
<td align="center" valign="middle">20.4&#x00B1;12.1</td>
<td align="center" valign="middle">19.4&#x00B1;12.9</td>
<td align="center" valign="middle">0.95</td>
</tr>
<tr>
<td align="left" valign="middle">Cisplatin, &#x00B5;M</td>
<td align="center" valign="middle">1.99&#x00B1;0.63</td>
<td align="center" valign="middle">2.52&#x00B1;0.53</td>
<td align="center" valign="middle">1.27</td>
</tr>
<tr>
<td align="left" valign="middle">Carboplatin, &#x00B5;M</td>
<td align="center" valign="middle">25.2&#x00B1;14.1</td>
<td align="center" valign="middle">17.4&#x00B1;12.1</td>
<td align="center" valign="middle">0.69</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn><p>R.R. was obtained by dividing the IC<sub>50</sub> value of Caki/AX cells by that of Caki-2 cells. Each value represents the mean &#x00B1; standard deviation (n=6-8).</p></fn>
<fn id="tfn2-a-MCO-23-5-02896"><p><sup>a</sup>P&#x003C;0.01 significantly different from Caki-2 cells (unpaired Student&#x0027;s t-test). R.R., relative resistance; IC<sub>50</sub>, 50&#x0025; inhibitory concentration.</p></fn>
</table-wrap-foot>
</table-wrap>
<table-wrap id="tIV-MCO-23-5-02896" position="float">
<label>Table IV</label>
<caption><p>Changes in the expression levels of vascular endothelial growth factor signalling pathway-related mRNAs.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="middle" colspan="3">A, Increased in Caki/AX cells</th>
</tr>
<tr>
<th align="left" valign="middle">Gene</th>
<th align="center" valign="middle">Description</th>
<th align="center" valign="middle">Log<sub>2</sub> (fold-difference)<sup><xref rid="tfn3-a-MCO-23-5-02896" ref-type="table-fn">a</xref></sup></th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="middle"><italic>FIGF</italic></td>
<td align="left" valign="middle">C-fos-induced growth factor (vascular endothelial growth factor D)</td>
<td align="center" valign="middle">2.21</td>
</tr>
<tr>
<td align="left" valign="middle"><italic>NFATC3</italic></td>
<td align="left" valign="middle">Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3</td>
<td align="center" valign="middle">1.21</td>
</tr>
<tr>
<td align="left" valign="middle"><italic>NFATC4</italic></td>
<td align="left" valign="middle">Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4</td>
<td align="center" valign="middle">0.82</td>
</tr>
<tr>
<td align="left" valign="middle"><italic>PDGFC</italic></td>
<td align="left" valign="middle">Mitogen-activated protein kinase 3</td>
<td align="center" valign="middle">1.13</td>
</tr>
<tr>
<td align="left" valign="middle"><italic>PIK3CA</italic></td>
<td align="left" valign="middle">Mitogen-activated protein kinase-activated protein kinase 3</td>
<td align="center" valign="middle">1.15</td>
</tr>
<tr>
<td align="left" valign="middle"><italic>PIK3CB</italic></td>
<td align="left" valign="middle">Nuclear factor of activated T-cells 5, tonicity-responsive</td>
<td align="center" valign="middle">1.24</td>
</tr>
<tr>
<td align="left" valign="middle"><italic>PIK3R1</italic></td>
<td align="left" valign="middle">Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3</td>
<td align="center" valign="middle">1.58</td>
</tr>
<tr>
<td align="left" valign="middle"><italic>PLCG2</italic></td>
<td align="left" valign="middle">Phospholipase C, gamma 2 (phosphatidylinositol-specific)</td>
<td align="center" valign="middle">1.40</td>
</tr>
<tr>
<td align="left" valign="middle"><italic>PPP3R2</italic></td>
<td align="left" valign="middle">Protein phosphatase 3, regulatory subunit B, beta</td>
<td align="center" valign="middle">1.82</td>
</tr>
<tr>
<td align="left" valign="middle"><italic>SH2D2A</italic></td>
<td align="left" valign="middle">SH2 domain containing 2A</td>
<td align="center" valign="middle">1.66</td>
</tr>
<tr>
<td align="left" valign="middle"><italic>SPHK1</italic></td>
<td align="left" valign="middle">Sphingosine kinase 1</td>
<td align="center" valign="middle">3.35</td>
</tr>
<tr>
<td align="left" valign="middle" colspan="3">B, Decreased in Caki/AX cells</td>
</tr>
<tr>
<td align="left" valign="middle">Gene</td>
<td align="center" valign="middle">Description</td>
<td align="center" valign="middle">Log<sub>2</sub> (fold-difference)<sup><xref rid="tfn3-a-MCO-23-5-02896" ref-type="table-fn">a</xref></sup></td>
</tr>
<tr>
<td align="left" valign="middle"><italic>RAC2</italic></td>
<td align="left" valign="middle">Ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)</td>
<td align="center" valign="middle">-2.86</td>
</tr>
<tr>
<td align="left" valign="middle"><italic>VEGFC</italic></td>
<td align="left" valign="middle">Vascular endothelial growth factor C</td>
<td align="center" valign="middle">-1.39</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="tfn3-a-MCO-23-5-02896"><p><sup>a</sup>Fold-difference is the normalized gene expression (2<sup>-&#x0394;Cq</sup>) in Caki/AX cells divided by the normalized gene expression (2<sup>-&#x0394;Cq</sup>) in Caki-2 cells.</p></fn>
</table-wrap-foot>
</table-wrap>
</floats-group>
</article>
