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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">BR</journal-id>
<journal-title-group>
<journal-title>Biomedical Reports</journal-title>
</journal-title-group>
<issn pub-type="ppub">2049-9434</issn>
<issn pub-type="epub">2049-9442</issn>
<publisher>
<publisher-name>D.A. Spandidos</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">BR-23-6-02064</article-id>
<article-id pub-id-type="doi">10.3892/br.2025.2064</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Articles</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>High glucose promotes cisplatin chemoresistance in MDA-MB-231 breast cancer derived cells through changes in gene expression and multiple signaling pathways</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Viedma-Rodr&#x00ED;guez</surname><given-names>Araceli Rub&#x00ED;</given-names></name>
<xref rid="af1-BR-23-6-02064" ref-type="aff">1</xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Mart&#x00ED;nez-Hern&#x00E1;ndez</surname><given-names>Mar&#x00ED;a Guadalupe</given-names></name>
<xref rid="af1-BR-23-6-02064" ref-type="aff">1</xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Flores-L&#x00F3;pez</surname><given-names>Luis Antonio</given-names></name>
<xref rid="af2-BR-23-6-02064" ref-type="aff">2</xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Vel&#x00E1;zquez-Flores</surname><given-names>Miguel &#x00C1;ngel</given-names></name>
<xref rid="af3-BR-23-6-02064" ref-type="aff">3</xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Esparza-Garrido</surname><given-names>Ruth Ruiz</given-names></name>
<xref rid="af4-BR-23-6-02064" ref-type="aff">4</xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Prado-Baeza</surname><given-names>Javier Rodrigo</given-names></name>
<xref rid="af5-BR-23-6-02064" ref-type="aff">5</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Baiza-Gutman</surname><given-names>Luis Arturo</given-names></name>
<xref rid="af1-BR-23-6-02064" ref-type="aff">1</xref>
<xref rid="c1-BR-23-6-02064" ref-type="corresp"/>
</contrib>
</contrib-group>
<aff id="af1-BR-23-6-02064"><label>1</label>Unit of Morphology and Function, Faculty of Higher Studies-Iztacala, National Autonomous University of Mexico, Tlalnepantla, State of Mexico 54090, Mexico</aff>
<aff id="af2-BR-23-6-02064"><label>2</label>Secretary of Science, Humanities, Technology and Innovation, National Institute of Pediatrics, Ministry of Health, Mexico City 04530, Mexico</aff>
<aff id="af3-BR-23-6-02064"><label>3</label>Non-coding RNAs Laboratory, Medical Research Unit in Human Genetics, Children&#x0027;s Hospital &#x2018;Dr. Silvestre Frenk Freund&#x2019;, National Medical Center XXI Century, Mexican Institute of Social Security, Ciudad 06720, Mexico</aff>
<aff id="af4-BR-23-6-02064"><label>4</label>Researchers for Mexico Program, Non-coding RNAs Laboratory, Medical Research Unit in Human Genetics, Children&#x0027;s Hospital &#x2018;Dr. Silvestre Frenk Freund&#x2019;, National Medical Center XXI Century, Mexican Institute of Social Security, Ciudad 06720, Mexico</aff>
<aff id="af5-BR-23-6-02064"><label>5</label>National Cancer Institute of Mexico, Mexico City 14080, Mexico</aff>
<author-notes>
<corresp id="c1-BR-23-6-02064"><italic>Correspondence to:</italic> Professor Luis Arturo Baiza-Gutman, Unit of Morphology and Function, Faculty of Higher Studies-Iztacala, National Autonomous University of Mexico, Los Reyes Iztacala, Tlalnepantla, State of Mexico 54090, Mexico <email>labaiza@unam.mx</email></corresp>
</author-notes>
<pub-date pub-type="collection"><month>12</month><year>2025</year></pub-date>
<pub-date pub-type="epub"><day>02</day><month>10</month><year>2025</year></pub-date>
<volume>23</volume>
<issue>6</issue>
<elocation-id>186</elocation-id>
<history>
<date date-type="received">
<day>04</day>
<month>04</month>
<year>2025</year>
</date>
<date date-type="accepted">
<day>17</day>
<month>09</month>
<year>2025</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright: &#x00A9; 2025 Viedma-Rodr&#x00ED;guez et al.</copyright-statement>
<copyright-year>2025</copyright-year>
<license license-type="open-access">
<license-p>This is an open access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by-nc-nd/4.0/">Creative Commons Attribution-NonCommercial-NoDerivs License</ext-link>, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.</license-p></license>
</permissions>
<abstract>
<p>Epidemiological and experimental evidence indicate that hyperglycemia, transient hyperinsulinemia and insulin-like growth factor-1 promote an aggressive phenotype of breast tumor cells during diabetes mellitus. The present study evaluated the effect of high glucose (HG) concentration (30 mmol/l) on cisplatin sensitivity and gene expression in MDA-MB-231 triple-negative breast cancer (TNBC)-derived cells. Cisplatin cytotoxicity was assessed by the MTT assay and was attenuated by HG. This effect was accompanied by reduced caspase-3 activation, indicating impaired apoptosis. Differentially expressed genes between HG and normal glucose (5.6 mmol/l) conditions were analyzed by microarray. The upregulation of tetraspanin 1 (<italic>TSPAN1</italic>) and frizzled 3 (<italic>FZD3</italic>) was validated by reverse transcription-quantitative PCR. HG promotes cisplatin chemoresistance by preventing apoptosis. Additionally, HG altered the expression of genes involved in glucose, glycerophospholipid, purine and pyrimidine metabolism. Regulatory pathways affected included Wnt/&#x03B2;-catenin, p53 network, NF-&#x03BA;B survival and DNA damage response. Candidate genes potentially associated with HG-induced chemoresistance included <italic>SLC6A6, TSPAN1, TNFSF7, PDE4B, RPS13, COX4I1, RAD17, LRP8, SMARCA2, EHD1, LEF1</italic> and <italic>EIF4G2</italic>. Survival analysis using the KM-Plotter platform revealed that <italic>YBX3</italic> and amphiregulin expression were significantly associated with poor prognosis. By contrast, amyloid precursor protein (<italic>APP</italic>) and N-cadherin (<italic>CDH2</italic>) showed non-significant trends. Coexpression analyses demonstrated that <italic>APP</italic> and <italic>CDH2</italic> were positively correlated with <italic>YBX3.</italic> This suggests they may contribute to tumor aggressiveness as part of <italic>YBX3</italic>-driven regulatory networks, rather than as independent prognostic markers. Collectively, the present findings demonstrated that HG promotes cisplatin resistance and aggressive features in TNBC cells through multiple metabolic and signaling pathways. Notably, these include the Wnt/&#x03B2;-catenin axis. Candidate biomarkers with potential prognostic and therapeutic relevance in diabetic breast cancer (BC) were also identified.</p>
</abstract>
<kwd-group>
<kwd>breast cancer</kwd>
<kwd>hyperglycemia</kwd>
<kwd>cell death</kwd>
<kwd>Wnt/&#x03B2;-catenin</kwd>
<kwd>triple-negative breast cancer</kwd>
</kwd-group>
<funding-group>
<funding-statement><bold>Funding:</bold> The present study was supported by the Programa de Apoyo a Proyectos de Investigaci&#x00F3;n e Innovaci&#x00F3;n Tecnol&#x00F3;gica <italic>(PAPIIT)</italic>, Direcci&#x00F3;n General de Apoyo al Personal Acad&#x00E9;mico (DGAPA), Universidad Nacional Aut&#x00F3;noma de M&#x00E9;xico (UNAM), (grant nos. IN223121 and IN220024), by the Financing for Research of Women Scientists (grant no. FICDTEM-2023-56) and by the Fiscal Resources Program for Research of the National Institute of Pediatrics (grant no. 2020/016).</funding-statement>
</funding-group>
</article-meta>
</front>
<body>
<sec sec-type="intro">
<title>Introduction</title>
<p>The development of cancer is promoted by age, overweight, obesity, type 2 diabetes mellitus (T2DM) and metabolic syndrome. T2DM is associated with a significant number of cancers, such as those of the breast, pancreas, liver, colorectal, renal and reproductive systems. Diabetic patients with cancer have increased mortality compared with cancerous non-diabetic individuals (<xref rid="b1-BR-23-6-02064" ref-type="bibr">1</xref>).</p>
<p>Hyperglycemia, transient hyperinsulinemia, chronic inflammation and oxidative stress promote the activation of signaling mechanisms that favor the initiation, development and progression of cancer during diabetes (<xref rid="b1-BR-23-6-02064" ref-type="bibr">1</xref>,<xref rid="b2-BR-23-6-02064" ref-type="bibr">2</xref>). The increased plasma levels of insulin-like growth factors, enhanced production of inflammatory cytokines (IL-6, TNF&#x03B1; and IL1&#x03B2;), low expression of certain adipokines (adiponectin), and aberrant protein glycosylation in T2DM organisms induce changes in metabolic and signaling pathways (<xref rid="b2-BR-23-6-02064" ref-type="bibr">2</xref>). These changes help cancer cells adapt to a hyperglycemic environment and promote the proliferation and acquisition of a migratory and chemoresistant phenotype (<xref rid="b3-BR-23-6-02064" ref-type="bibr">3</xref>). The increased proliferative activity of tumor cells depends on a continuous supply of biomolecules such as amino acids, carbohydrates, nucleotides and fatty acids capable of providing the energy requirements of the cell, favoring the synthesis of DNA, RNA, proteins and lipids at a higher rate in diabetic patients (<xref rid="b4-BR-23-6-02064" ref-type="bibr">4</xref>).</p>
<p>The malignant cells that survive primary treatment evolve into a population of resistant clones, leading to cancer progression and patient death (<xref rid="b5-BR-23-6-02064" ref-type="bibr">5</xref>). Mortality from breast cancer (BC) is higher in women with diabetes compared with women without it, since diabetes can exacerbate the onset and development of cancer by activating various cellular processes such as proliferation, migration and epithelial-mesenchymal transition (EMT) (<xref rid="b6-BR-23-6-02064" ref-type="bibr">6</xref>). Additionally, variations in the expression and activity of several drug-metabolizing enzymes, altered drug membrane transport, and evasion of apoptosis play a critical role in drug resistance (<xref rid="b2-BR-23-6-02064" ref-type="bibr">2</xref>).</p>
<p>It was found that a high concentration of glucose promotes an invasive/metastatic phenotype, inducing proliferation, migration, EMT and cell invasion in MDA-MB-231 cells, which was associated with increased expression of plasminogen activator urokinase-type (uPA), its receptor (uPAR), and type 1 inhibitor (PAI-1), leading to the activation of plasminogen activation system and AKT signaling (<xref rid="b4-BR-23-6-02064" ref-type="bibr">4</xref>,<xref rid="b6-BR-23-6-02064" ref-type="bibr">6</xref>). EMT is one of the mechanisms to enhance migratory and invasive properties of tumor cells, together with cell survival, invasiveness and chemotherapy drug resistance (<xref rid="b7-BR-23-6-02064" ref-type="bibr">7</xref>).</p>
<p>Elevated blood glucose levels regulate the chemoresistance in BC (<xref rid="b2-BR-23-6-02064" ref-type="bibr">2</xref>,<xref rid="b3-BR-23-6-02064" ref-type="bibr">3</xref>,<xref rid="b8-BR-23-6-02064" ref-type="bibr">8</xref>). Hyperglycemia and diabetes promote the sensitivity of BC cells or breast tumors to some DNA repair inhibitors (<xref rid="b8-BR-23-6-02064" ref-type="bibr">8</xref>). On the other hand, the development of resistance to cisplatin and other drugs by BC cells is frequently mediated by the prevention of apoptosis, increased EMT, DNA repair, Wnt and PI3K pathways, since cisplatin leads to apoptosis through increased reactive oxygen species, which leads to DNA damage (<xref rid="b9-BR-23-6-02064" ref-type="bibr">9</xref>). However, the genes and signaling pathways implicated in the development of chemoresistant and aggressive BC phenotype by high glucose (HG) in diabetic patients have not been fully explored.</p>
<p>It was aimed to detect the action of HG on the chemoresistance to cisplatin and changes in gene expression in MDA-MB-231 BC-derived cells. In addition, to analyze the genes, metabolic and signaling pathways that can mediate the promotion of cisplatin resistance and a migratory phenotype by HG.</p>
</sec>
<sec sec-type="Materials|methods">
<title>Materials and methods</title>
<sec>
<title/>
<sec>
<title>Cell culture</title>
<p>MDA-MB-231 BC cells were acquired from the American Type Culture Collection (ATCC) and cultured in Dulbecco&#x0027;s Modi&#xFB01;ed Eagle&#x0027;s Medium/Ham&#x0027;s Nutrient Mixture F12 (DMEM-F12; MilliporeSigma). The medium was supplemented with 10&#x0025; fetal bovine serum (FBS; Biowest) and the following antibiotics: penicillin 100 U/ml and streptomycin 100 &#x00B5;g/ml (Thermo Fisher Scientific, Inc.). The cells were authenticated by the 17 short tandem repeat profiling (ATCC Cell Line Authentication Service) in August 2020. The RNA extraction and microarray were processed in 2019, and the corresponding microarray series GSE136277 was made public in August 2019. Most of the experiments were concluded in 2020. Cultures were routinely tested for mycoplasma contamination using a PCR-based detection kit (cat. no. ab289834; Abcam). For propagation, cells were seeded and cultured in monolayers in 75-cm<sup>2</sup> tissue culture flasks. For some experiments, cells cultured in 6.0-cm-diameter culture plates to 60-80&#x0025; confluence were cultured for 48 h in the following conditions: i) Normal glucose (NG), 5.6 mmol/l; ii) 30 mmol/l (HG); iii) HG + 60 &#x00B5;mol/l cisplatin (MilliporeSigma); and iv) NG + 60 &#x00B5;mol/l cisplatin. The cells were detached with 0.25&#x0025; trypsin-EDTA solution (Biowest).</p>
<p>Supplementation with &#x007E;5.6 mmol/l D-glucose approximates normal blood sugar levels, whereas concentrations &#x007E;10 mmol/l and above mimic pre-diabetic and diabetic conditions, respectively. In most studies, HG conditions use 25-30 mmol/l glucose. In previous studies, it was found that 30 mmol/l glucose produced the most evident and reproducible effects on MDA-MB-231 cells (<xref rid="b4-BR-23-6-02064" ref-type="bibr">4</xref>,<xref rid="b6-BR-23-6-02064" ref-type="bibr">6</xref>). Furthermore, interstitial glucose can be similar to blood glucose, considering that interstitial glucose concentrations in skeletal muscle of patients with T2DM during a glucose tolerance test were similar to blood glucose levels (<xref rid="b10-BR-23-6-02064" ref-type="bibr">10</xref>).</p>
</sec>
<sec>
<title>MTT assay</title>
<p>The MTT method is a quantitative colorimetric assay that measures the metabolic activity of cells, which is proportional to changes in the cell populations. This assay was used to determine the changes in the cell population and the median lethal concentration (LC<sub>50</sub>) of cisplatin under standard culture (17.5 mmol/l glucose), NG and HG conditions, and using an osmotic control of glucose 5.6 mmol/l plus mannitol 19.4 mmol/l (Mannitol). A total of 5,000 cells per well were seeded in 96-well plates and exposed to different concentrations of cisplatin (15-90 &#x00B5;mol/l). The culture medium was replaced with 200 &#x00B5;l serum-free DMEM and 50 &#x00B5;l of MTT solution (5 mg/ml) after 48 h of incubation at 37&#x02DA;C. Then, the cells were incubated for an additional 4 h, the medium was removed, and 100 &#x00B5;l of dimethyl sulfoxide was added to dissolve the formazan crystals. The plate was read at 570 nm wavelength using a microplate reader iMark (Bio-Rad Laboratories, Inc.).</p>
</sec>
<sec>
<title>Western blotting</title>
<p>The cells were washed with PBS and lysed in RIPA Buffer (cat. no. 89900; Thermo Fisher Scientific, Inc.), containing a protease inhibitor cocktail (cat. no. I3786; MilliporeSigma) to prevent protein degradation. Proteins were quantified by the Bradford assay, and the cell lysates were stored at -70&#x02DA;C. Equal amounts of protein (100 &#x00B5;g per well) were mixed with Laemmli sample buffer and separated by 10&#x0025; SDS-polyacrylamide gel electrophoresis. The transfer was realized in a PVDF membrane (0.8 mm/cm<sup>2</sup>, 2 h), using Tris buffer 25 mmol/l, glycine 192 mmol/l and methanol 20&#x0025;. Membranes were then blocked with 5&#x0025; BSA in TBS for 1 h at room temperature to prevent non-specific binding. Subsequently, membranes were incubated overnight at 4&#x02DA;C with primary anti-caspase-3 antibody (1:500; cat. no. sc-7272; Santa Cruz Biotechnology, Inc.) in TBS-T (0.1&#x0025; Tween-20) containing 1&#x0025; BSA. Antibody binding was detected using an HRP-conjugated secondary antibody (1:5,000; cat. no. 7076S; Cell Signaling Technology, Inc.), incubated for 1 h at room temperature, followed by visualization with an enhanced chemiluminescence kit (Clarity Western ECL substrate, Bio-Rad Laboratories, Inc.), according to the manufacturer&#x0027;s instructions. The images were obtained using the C-Digit Blot Scanner (LI-COR Biosciences). The bands were quantified by densitometry analysis using the Image Studio 4.0 software (LI-COR Biosciences).</p>
</sec>
<sec>
<title>RNA extraction</title>
<p>Total RNA was extracted using TRIzol (Invitrogen; Thermo Fisher Scientific, Inc.), according to the manufacturer&#x0027;s instructions. RNA quality was verified by 2&#x0025; agarose gel electrophoresis, followed by ethidium bromide staining and visualization under UV light and quantified using a NanoDrop ND-1000 spectrophotometer (Thermo Fisher Scientific, Inc.).</p>
</sec>
<sec>
<title>Hybridization and microarray analysis</title>
<p>A total of 10 &#x00B5;g of total RNA obtained from cells cultured in NG and HG media was used for cDNA synthesis and labeling with the Superscript II kit (Invitrogen; Thermo Fisher Scientific, Inc.), incorporating dUTP-Cy5 for HG samples and dUTP-Cy3 for NG (control) samples. The absorbance was measured at 655 nm for Cy5 and 555 nm for Cy3. Fluorophore-labeled cDNAs were hybridized in similar quantities to the Human 10K 50-mer oligonucleotide collection (MWG Biotech Oligo Bio Sets).</p>
<p>Microarray images were acquired and quantified using a ScanArray 4000 scanner with QuantArray software (Packard BioChips; PerkinElmer, Inc.), and data were analyzed using Array-Pro Analyzer software (Media Cybernetics, Inc.). Background correction, normalization, intensity filtering, replicate analysis, and the selection of differentially expressed genes were performed using genArise, a free program developed by the Computing Unit of the Cellular Physiology Institute, National Autonomous University of Mexico (<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://www.ifc.unam.mx/genarise/">http://www.ifc.unam.mx/genarise/</ext-link>). The data generated in the present study were deposited in Gene Expression Omnibus (GEO) platform under accession number GSE136277 (<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE136277">https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE136277</ext-link>). Differentially expressed genes were identified using the following statistical cutoffs: Z-score &#x2265;2 or &#x2264;-2 for biological significance, and a false discovery rate (FDR) &#x2264;0.05 to account for multiple testing. These thresholds were applied from the outset of the analysis to ensure the robustness of the candidate genes included in subsequent evaluations.</p>
</sec>
<sec>
<title>Reverese transcription-quantitative PCR (RT-qPCR)</title>
<p>The microarray analysis was validated by RT-qPCR for frizzled 3 (<italic>FZD3</italic>) and tetraspanin 1 (<italic>TSPAN1</italic>). Total RNA (1 &#x00B5;g) was reverse-transcribed using the SuperScript&#x2122; III First-Strand Synthesis System (Invitrogen; Thermo Fisher Scientific, Inc.) according to the manufacturer&#x0027;s protocol (50&#x02DA;C for 60 min, followed by enzyme inactivation at 70&#x02DA;C for 15 min). Alternatively, when individual components were used, reverse transcription was performed in a 20 &#x00B5;l reaction mixture containing 200 U M-MLV reverse transcriptase, 1X first-strand buffer, 0.5 mM dNTP mix (Thermo Fisher Scientific, Inc.), 25 &#x00B5;g/ml oligo(dT) primers (Invitrogen; Thermo Fisher Scientific, Inc.), and 40 U RNase inhibitor, incubated at 37&#x02DA;C for 60 min with enzyme inactivation at 95&#x02DA;C for 15 min. The resulting cDNA was amplified using the Maxima SYBR Green/ROX qPCR Master Mix (Fermentas; Thermo Fisher Scientific, Inc.) on a StepOnePlus&#x2122; Real-Time PCR System (Applied Biosystems; Thermo Fisher Scientific, Inc.).</p>
<p>The resulting cDNA was amplified using the Maxima SYBR Green/ROX qPCR Master Mix (Fermentas; Thermo Fisher Scientific, Inc.) in a StepOnePlus<sup>&#x2122;</sup> Real-Time PCR System (Applied Biosystems; Thermo Fisher Scientific, Inc.) with the following thermocycling conditions: Initial activation at 95&#x02DA;C for 15 min; 40 cycles of 95&#x02DA;C for 15 sec and annealing at the primer-specific melting temperature for 1 min; followed by a final extension at 72&#x02DA;C for 10 min. Expression of the selected genes was normalized to hypoxanthine-guanine phosphoribosyltransferase (<italic>HPRT</italic>). The primer sequences used were as follows: <italic>FZD3</italic> forward, 5&#x0027;-CATGGAGATGTTTGGTGTTCCTT-3&#x0027; and reverse, 5&#x0027;-AAGTCGAGGATATGGCTCATCAC-3&#x0027;; <italic>TSPAN1</italic> forward, 5&#x0027;-TGGGCTGCTATGGTGCTA-3&#x0027; and reverse, 5&#x0027;-TGCAGGTTTCATTGGCTGT-3&#x0027;; and <italic>HPRT</italic> forward, 5&#x0027;-CATTATGCTGAGGATTTGGAAAGG-3&#x0027; and reverse, 5&#x0027;-CTTGAGCACACAGAGGGCTACA-3&#x0027;. Relative expression levels were calculated using the 2<sup>-&#x0394;&#x0394;Cq</sup> method (<xref rid="b11-BR-23-6-02064" ref-type="bibr">11</xref>).</p>
<p><italic>HPRT</italic> was used as a housekeeping gene because its expression has been considered moderately stable in BC cell lines, including MDA-MB-231 cells (<xref rid="b12-BR-23-6-02064" ref-type="bibr">12</xref>). Under hyperglycemic conditions, Liu <italic>et al</italic> (<xref rid="b13-BR-23-6-02064" ref-type="bibr">13</xref>) identified the <italic>HPRT</italic> gene as one of the more reliable reference genes in retinal pigment epithelial cells, and even <italic>HPRT</italic> expression was more stable than <italic>ACTB</italic> and <italic>GAPDH</italic> genes. Additionally, no changes in the expression of this gene under HG were found in our microarray study.</p>
</sec>
<sec>
<title>Immunohistochemical (IHC) expression of TSPAN-1 and FZD3 in BC tissue</title>
<p>IHC expression of TSPAN1 and FZD3 in <italic>BC</italic> tissue. To investigate the protein expression patterns of TSPAN1 and FZD3, representative IHC images of ductal breast carcinoma were analyzed from 50 samples available in the Human Protein Atlas database (<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="https://www.proteinatlas.org/">https://www.proteinatlas.org/</ext-link>), corresponding to women aged 30-37 years. Adjacent normal breast tissue and adenoma samples were used as controls<italic>.</italic></p>
</sec>
<sec>
<title>Gene analysis and Gene Ontology (GO)</title>
<p>The analysis of genes differentially regulated by HG and their associated functions, including GO categories (cellular components, molecular functions and biological processes), as well as biological pathways, was performed using Gene Set Enrichment Analysis (GSEA). For this purpose, the WEB-based GEne SeT AnaLysis Toolkit (WebGestalt; <ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://www.webgestalt.org/">http://www.webgestalt.org/</ext-link>) and WikiPathways Cancer were employed. Gene sets were considered significant at an FDR &#x2264;0.05. In addition, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis (<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="https://www.genome.jp/kegg/pathway.html">https://www.genome.jp/kegg/pathway.html</ext-link>) was used to determine the interactions of differentially expressed genes within metabolic and signaling pathways.</p>
</sec>
<sec>
<title>Functional association network and selection of genes involved in chemoresistance</title>
<p>All the overexpressed and downregulated genes associated with cancer were uploaded into the program STRING (<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="https://string-db.org/">https://string-db.org/</ext-link>), which predicts the protein-protein interaction (PPI) network. The confidence score for displaying interaction was 0.9. The formatted PPI networks were uploaded and visualized with the Cytoscape software (version 3.10.1) (<xref rid="b14-BR-23-6-02064" ref-type="bibr">14</xref>). Due to the complexity of this network, the CytoHubba plugin was used to select the 50 nodes with the highest degree score, and their interaction network was constructed (<xref rid="b15-BR-23-6-02064" ref-type="bibr">15</xref>). Furthermore, the overexpressed genes with at least 2-fold change and their involvement in chemoresistance, according to scientific studies (<xref rid="b16-BR-23-6-02064 b17-BR-23-6-02064 b18-BR-23-6-02064 b19-BR-23-6-02064" ref-type="bibr">16-19</xref>), were selected, and their possible participation in HG-dependent chemoresistance was considered.</p>
</sec>
<sec>
<title>Kaplan-Meier (KM) plot analysis</title>
<p>Overall survival (OS) analysis was performed for the key genes <italic>YBX3</italic> (also known as <italic>CSDA</italic>), amphiregulin (<italic>AREG</italic>), amyloid precursor protein (<italic>APP</italic>) and N-cadherin (<italic>CDH2</italic>) using the KM Plotter database (<xref rid="b20-BR-23-6-02064" ref-type="bibr">20</xref>); (<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="https://kmplot.com">https://kmplot.com</ext-link>) to assess the prognostic value of the genes associated with cisplatin resistance in BC. A cohort of 153 patients with TNBC who were split into high and low expression groups was selected, considering the median expression of the gene. OS plots were created using data from BC samples negative for estrogen, progesterone and HER2 receptors, as detected by IHC and microarray. The hazard ratio (HR) with 95&#x0025; confidence intervals (CIs) and log-rank P-values were calculated.</p>
</sec>
<sec>
<title>Coexpression analysis</title>
<p>To evaluate whether the selected genes are coexpressed in a cohort of patients with BC and the potential molecular and regulatory interactions between proteins codified by them, the coexpression of <italic>AREG</italic>, <italic>FZD3</italic>, <italic>APP</italic> and <italic>CDH2</italic> with <italic>YBX3</italic> was performed using R2: Genomics Analysis and Visualization Platform (<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://r2.amc.nl">http://r2.amc.nl</ext-link>) on TCGA Breast Invasive Carcinoma (BRCA) datasets (1,097 samples) with R2 internal identifier ps_avgpres_tcgabrca1097_tcgars. Pearson correlation coefficients and associated P-values were calculated, with scatter plots and linear regression used for visualization.</p>
</sec>
<sec>
<title>Statistical analysis</title>
<p>All experiments were performed in at least three independent replicates. Data are expressed as the mean &#x00B1; SD. One-way ANOVA followed by Tukey&#x0027;s multiple comparison test was used for MTT, western blotting and RT-qPCR analyses, and performed using GraphPad Prism 8.02 software (Dotmatics). P&#x2264;0.05 was considered to indicate a statistically significant difference. Microarray and GSEA analyses were considered significant with fold-change &#x2265;1.5 and FDR&#x2264;0.05, respectively. Co-expression analyses of <italic>AREG</italic>, <italic>FZD3</italic>, <italic>APP</italic> and <italic>CDH2</italic> with <italic>YBX3</italic> were performed using the R2 Genomics platform <ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="https://hgserver1.amc.nl/cgi-bin/r2/main.cgi">https://hgserver1.amc.nl/cgi-bin/r2/main.cgi</ext-link>, and survival analyses were conducted using the KM Plotter, with HRs, 95&#x0025; CIs and log-rank P-values. P&#x2264;0.05 was considered to indicate a statistically significant difference.</p>
</sec>
</sec>
</sec>
<sec sec-type="Results">
<title>Results</title>
<p>Previously, it was found that HG increases cell population growth, migration, invasion and EMT in MDA-MB-231 cells (<xref rid="b4-BR-23-6-02064" ref-type="bibr">4</xref>). In the present study, the effect of HG was analyzed on cisplatin resistance, cell death and changes in gene expression. Additionally, it was analyzed how the change in gene expression is associated with a chemoresistant and aggressive phenotype.</p>
<sec>
<title/>
<sec>
<title>Hyperglycemia-induced resistance to cisplatin</title>
<p>To investigate whether HG induces drug resistance, the LC<sub>50</sub> of cisplatin for MDA-MB-231 cells was determined under standard culture conditions (glucose 17.5 mmol/l), NG, NG with mannitol (osmotic control) and HG. The osmotic control group showed no difference compared with the NG group. Cell viability progressively decreased as cisplatin concentration increased from 15 to 90 &#x00B5;mol/l in a concentration-dependent manner, with LC<sub>50</sub> values of 60, 15 and 75 &#x00B5;mol/l for standard, NG and HG conditions, respectively. These findings indicated that cells cultured under HG and standard conditions were more resistant to cisplatin compared with those cultured under NG. Thus, in the present study, cisplatin resistance was directly proportional to glucose concentration (<xref rid="f1-BR-23-6-02064" ref-type="fig">Fig. 1A</xref> and <xref rid="f1-BR-23-6-02064" ref-type="fig">B</xref>).</p>
</sec>
<sec>
<title>Hyperglycemia prevents the apoptosis induced by cisplatin</title>
<p>Apoptosis induced by cisplatin under normoglycemic and hyperglycemic conditions was evaluated in MDA-MB-231 cells by western blot analysis of caspase-3 activation. The caspase 3 antibody recognizes two band, one of higher molecular weight (MW) corresponding with the procapase 3, and other of lower MW corresponding to the cleaved/active caspase 3 (<xref rid="f1-BR-23-6-02064" ref-type="fig">Fig. 1C</xref>). Both NG and HG groups exhibited similar levels of total caspase 3 independently of the cisplatin treatment (<xref rid="f1-BR-23-6-02064" ref-type="fig">Fig. 1D</xref>). Whereas, cisplatin induced a significant increase in the proportion of active caspase 3 in both NG (P&#x2264;0.001) and HG (P&#x2264;0.001) conditions (<xref rid="f1-BR-23-6-02064" ref-type="fig">Fig. 1E</xref>). Notably, the NG and NG/cisplatin groups displayed higher levels of active caspase-3 than the corresponding HG and HG/cisplatin groups (<xref rid="f1-BR-23-6-02064" ref-type="fig">Fig. 1E</xref>). These results indicated that HG attenuated cisplatin-induced apoptosis, thereby promoting cisplatin chemoresistance.</p>
</sec>
<sec>
<title>Overall changes in gene expression</title>
<p>Considering an expression change equal to or greater than 1.5-fold, 1,099 genes were differentially expressed. Among these, 457 were overexpressed, while 642 were downregulated under the HG condition. The top 15 overexpressed and downregulated genes in the HG microenvironment are presented in <xref rid="tI-BR-23-6-02064" ref-type="table">Table I</xref>. All differentially expressed genes are listed in <xref rid="SD1-BR-23-6-02064" ref-type="supplementary-material">Tables SI</xref> and <xref rid="SD2-BR-23-6-02064" ref-type="supplementary-material">SII</xref>.</p>
</sec>
<sec>
<title>GSEA</title>
<p>Microarray data were subjected to functional enrichment analysis using WEB-Gestalt and the WikiPathways database. In the cellular component analysis, an activation of genes that encode protein constituents of the ribosomes, plasma membrane, cell junctions and endoplasmic reticulum was found (<xref rid="f2-BR-23-6-02064" ref-type="fig">Fig. 2A</xref>). This was also reflected in the molecular function analysis, where changes in structural constituents of ribosomes, sodium symporter activity and ion transmembrane transport were identified. In addition, changes in hydrolase activity, calcium ion binding, kinase binding and protein-containing complex binding were observed (<xref rid="f2-BR-23-6-02064" ref-type="fig">Fig. 2B</xref>). According to the enrichment analysis, the following signaling pathways were enriched in a hyperglycemic microenvironment: Wnt/&#x03B2;-catenin, angiogenesis, TP53 network, NF-&#x03BA;B survival signaling, apoptosis, TGF-beta receptor signaling and ATM-dependent DNA damage response (<xref rid="f2-BR-23-6-02064" ref-type="fig">Fig. 2C</xref>).</p>
</sec>
<sec>
<title>Gene validation</title>
<p>The expression of <italic>TSPAN1</italic> and <italic>FZD3</italic> was evaluated by RT-qPCR to validate the microarray analysis. Both genes are associated with an aggressive BC phenotype and showed some of the highest Z-scores (3.81 for <italic>TSPAN1</italic> and 2.85 for <italic>FZD3</italic>). In particular, FZD3, a protein of the Wnt/&#x03B2;-catenin pathway, exhibited the highest Z-score. RT-qPCR analysis confirmed that <italic>FZD3</italic> expression under HG conditions was 3.81-fold higher compared with NG (<xref rid="f3-BR-23-6-02064" ref-type="fig">Fig. 3</xref>). Similarly, <italic>TSPAN1</italic> expression under HG conditions was 2.26-fold higher than under NG conditions, consistent with the microarray results (<xref rid="f3-BR-23-6-02064" ref-type="fig">Fig. 3</xref>). These findings are also supported by data from the Human Protein Atlas, which shows higher expression of TSPAN1 and FZD3 proteins in BC tissues compared with healthy mammary tissue (<xref rid="f3-BR-23-6-02064" ref-type="fig">Fig. 3</xref>).</p>
</sec>
<sec>
<title>Hyperglycemia alters genes associated with metabolism</title>
<p>According to the aforementioned analysis with the KEGG pathways program, it was found that a high number of genes of transmembrane transporters and ribosomal proteins were differentially expressed in HG conditions (<xref rid="tII-BR-23-6-02064" ref-type="table">Table II</xref>). Additionally, several genes associated with other metabolic processes were found, including: i) Synthesis of DNA, RNA and proteins; and ii) purine, pyrimidine and lipid metabolism. Noteworthy, the upregulation of some genes of electron chain transport or ECT (<italic>COX41</italic>, <italic>COX61</italic>, <italic>COX7B</italic> and <italic>NDUFB3</italic>) indicated an increase in the electron flux through this chain. However, subunits <italic>ATP5O</italic> and <italic>ATP5D</italic> of the ATP synthase were downregulated, suggesting the uncoupling between the ECT and ATP synthesis.</p>
</sec>
<sec>
<title>Hyperglycemia alters genes associated with apoptosis and cell survival</title>
<p>On the other hand, it was found that HG induces increased expression of some genes that promote cell survival (<italic>TNFSF7</italic> and <italic>TRAF1</italic>) (<xref rid="b21-BR-23-6-02064" ref-type="bibr">21</xref>) or prevent apoptosis <italic>(XIAP</italic> and <italic>BCL2L2</italic>) (<xref rid="b22-BR-23-6-02064" ref-type="bibr">22</xref>,<xref rid="b23-BR-23-6-02064" ref-type="bibr">23</xref>). Additionally, HG leads to low expression of proapoptotic factors (<italic>BIK, PDCD8, PDCD5, BNIP1, DAPK1</italic> and <italic>CCAR2</italic>) (<xref rid="b24-BR-23-6-02064 b25-BR-23-6-02064 b26-BR-23-6-02064" ref-type="bibr">24-26</xref>). These data indicated that HG prevents BC cell death and promotes cell survival under stress conditions, such as the presence of chemotherapeutic agents, such as cisplatin (<xref rid="f1-BR-23-6-02064" ref-type="fig">Fig. 1</xref>).</p>
</sec>
<sec>
<title>Signal pathways associated with the adaptation to hyperglycemia</title>
<p>The KEGG pathways program indicates that Wnt-&#x03B2;-catenin, Jak/STAT and Ras-MAPK are involved in the action of HG, together with processes such as cytokine-cytokine receptor interaction, regulation of actin cytoskeleton and focal adhesion (<xref rid="tII-BR-23-6-02064" ref-type="table">Table II</xref>). These results and the PPI analysis suggested that the Wnt-&#x03B2;-catenin signaling has a significant role in the action of HG.</p>
</sec>
<sec>
<title>Selection of hub genes and PPI</title>
<p>In the PPI network of overexpressed genes constructed by Cytoscape, a total of 303 nodes and 834 edges were arranged (data not shown); further analysis by cytoHubba based on this network revealed a network with 50 principal nodes (<xref rid="f4-BR-23-6-02064" ref-type="fig">Fig. 4</xref>). Between the highest degree score hubs, genes for ribosomal proteins were found, such as <italic>RPL13a</italic>, <italic>RPL23a</italic>, <italic>RPS3a1</italic>, <italic>RPS13</italic>, <italic>RPS8</italic>, <italic>RPS21</italic>, <italic>RPL6</italic>, <italic>RPL15</italic>, <italic>RPS7</italic>, <italic>MRPS7</italic> and <italic>RPL9</italic> with a high degree of interaction shown in red (<xref rid="f3-BR-23-6-02064" ref-type="fig">Fig. 3</xref>). Interacting with these nodes genes coding for transcription and protein synthesis (<italic>PABPC1</italic>, <italic>EIF4G2</italic>, <italic>EIF5B</italic>, <italic>EEF1G</italic> and <italic>HNRNPA1</italic>), potassium channels (<italic>KCNG2</italic>, <italic>KCNG1</italic> and <italic>KCNS1</italic>) and metabolism (<italic>COX4I1</italic>, <italic>COX6A1</italic> and <italic>NDUFB3</italic>) were found. Other important hubs were associated with the Wnt/canonical pathway, such as <italic>WNT-1</italic>, <italic>DVL2</italic> and <italic>LEF1</italic>. Other proteins related to cancer progression were also represented (<italic>APP</italic>, <italic>AREG</italic> and <italic>CDH2</italic>). It is noteworthy that ribosomal proteins were overrepresented and had the highest degree scores (red and orange in <xref rid="f4-BR-23-6-02064" ref-type="fig">Fig. 4</xref>). Because of this, nodes of important proteins had lower degree scores (orange and yellow in <xref rid="f4-BR-23-6-02064" ref-type="fig">Fig. 4</xref>). The PPI network according to the enrichment analysis indicates the relevance of Wnt/&#x03B2;-catenin (<xref rid="f2-BR-23-6-02064" ref-type="fig">Fig. 2C</xref>).</p>
</sec>
<sec>
<title>Prognostic value of Hub genes YBX3, AREG, APP and CDH2</title>
<p>Considering the hub genes with the highest number of interactions obtained from the CytoHubba analysis and their prognostic evaluation using the KM-plot platform, <italic>YBX3</italic> or <italic>CSDA</italic> (HR=2.04; 95&#x0025; CI, 1.01-4.01; P=0.041), <italic>AREG</italic> (HR=2.57; 95&#x0025; CI, 1.26-5.24; P=0.0073), <italic>APP</italic> (HR=1.73; 95&#x0025; CI, 0.87-3.44; P=0.11) and <italic>CDH2</italic> (HR=1.74; 95&#x0025; CI, 0.88-3.46; P=0.11) were associated with poor prognosis in diabetic patients with BC (<xref rid="f5-BR-23-6-02064" ref-type="fig">Fig. 5</xref>). These data demonstrate that high expression of <italic>YBX3</italic> and <italic>AREG</italic> is significantly associated with reduced survival probability, whereas <italic>APP</italic> and <italic>CDH2</italic> did not reach statistical significance. Nevertheless, elevated <italic>YBX3</italic> and <italic>AREG</italic> levels may serve as potential biomarkers for identifying diabetic patients with BC with a worse prognosis.</p>
</sec>
<sec>
<title>Coexpression of hub genes YBX3, AREG, APP and CDH2</title>
<p>The coexpression analysis was performed in a cohort of 1,097 patients diagnosed with breast invasive carcinoma, aged 26 to 90 years, with heterogeneous clinical characteristics (<xref rid="f6-BR-23-6-02064" ref-type="fig">Fig. 6</xref>), including estrogen receptor status (ER<sup>+</sup> 71.7&#x0025;, ER<sup>-</sup> 22&#x0025;), progesterone receptor status (PR<sup>+</sup> 63.7&#x0025;, PR<sup>-</sup> 31.4&#x0025;), HER2 status (HER2<sup>+</sup> 14&#x0025;, HER2<sup>-</sup> 51.3&#x0025;) and metastatic condition (M0 82.6&#x0025;, MX 14.8&#x0025; and M1 2&#x0025;). The analysis revealed that <italic>APP</italic> and <italic>AREG</italic> expression were significantly correlated with <italic>YBX3</italic> (R=0.373 and R=0.119, respectively), indicating that higher <italic>YBX3</italic> expression is associated with increased <italic>APP</italic> and <italic>AREG</italic> expression. A positive but weak correlation was observed between <italic>YBX3</italic> and <italic>FZD3</italic> (R=0.139). Importantly, <italic>CDH2</italic> and <italic>YBX3</italic> also exhibited a weak but statistically significant correlation (R=0.131; P=1.29x10<sup>-5</sup>).</p>
</sec>
</sec>
</sec>
<sec sec-type="Discussion">
<title>Discussion</title>
<p>Hyperglycemia is one of the most important factors considered a promoter of cancer in T2DM. In the present study, it was detected that HG induces cisplatin resistance and changes in gene expression in MDA-MB-231 cells. These changes indicate a variety of alterations in metabolic and signaling pathways that may be related to preventing cell death and increased chemoresistance associated with an aggressive phenotype. Additionally, some genes (<italic>AREG</italic> and <italic>YBX3</italic>) were selected as possible biomarkers of chemoresistance and prognostic indicators. Furthermore, it was confirmed that hyperglycemia increases the migratory phenotype in these cells.</p>
<p><italic>HG induces resistance to cisplatin.</italic> The prometastatic action of HG on MDA-MB-231 cells has been demonstrated. In our previous studies, HG promoted the growth of the cell population, EMT, clonogenicity, cell migration and cell invasion compared with NG and the control of osmolality (<xref rid="b4-BR-23-6-02064" ref-type="bibr">4</xref>,<xref rid="b6-BR-23-6-02064" ref-type="bibr">6</xref>). It was also described that T2DM promoted the progression of BC in mice (<xref rid="b27-BR-23-6-02064" ref-type="bibr">27</xref>). In the present study, the lower IC<sub>50</sub> for cisplatin in cell cultures with HG indicated the induction of cisplatin resistance by HG, corroborating that HG is a promoter of chemoresistance (<xref rid="b2-BR-23-6-02064" ref-type="bibr">2</xref>,<xref rid="b3-BR-23-6-02064" ref-type="bibr">3</xref>,<xref rid="b8-BR-23-6-02064" ref-type="bibr">8</xref>). Chemoresistance is associated with an invasive phenotype, and both are dependent on the prevention of apoptosis and the induction of EMT, cancer stemness, oncogenes, tumor suppressors, and metabolic and cell signaling reprogramming, involving transporter pumps, mitochondrial alterations, DNA repair and autophagy (<xref rid="b28-BR-23-6-02064" ref-type="bibr">28</xref>).</p>
<p><italic>Prevention of cisplatin-induced apoptosis by HG.</italic> To confirm if the prevention of the cytotoxic effect of cisplatin by HG is due to the prevention of cell death, caspase-3 was assessed. Caspase-3 is involved in the final stages of apoptosis, participating in the amplification of intracellular apoptotic signals as a consequence of the caspase cascade induced by both intrinsic and extrinsic signaling (<xref rid="b26-BR-23-6-02064" ref-type="bibr">26</xref>). In the present study, it was found that HG prevents caspase-3 activation and, therefore, apoptosis, which explains the increased chemoresistance to cisplatin (<xref rid="f1-BR-23-6-02064" ref-type="fig">Fig. 1</xref>). HG induces apoptosis in normal cells; however, in cancer cells, HG prevents a variety of proapoptotic mechanisms and promotes their proliferation and invasiveness (<xref rid="b4-BR-23-6-02064" ref-type="bibr">4</xref>,<xref rid="b6-BR-23-6-02064" ref-type="bibr">6</xref>,<xref rid="b28-BR-23-6-02064" ref-type="bibr">28</xref>). Additionally, the microarray analysis indicated that HG prevents the cytotoxic action of cisplatin through the increased expression of genes related to cell survival. (<italic>TNFSF7</italic> and <italic>TRAF1</italic>) (<xref rid="tII-BR-23-6-02064" ref-type="table">Table II</xref>) (<xref rid="b21-BR-23-6-02064" ref-type="bibr">21</xref>), and inhibition of apoptosis (<italic>XIAP</italic> and <italic>BCL2L2</italic>) (<xref rid="tII-BR-23-6-02064" ref-type="table">Table II</xref>) (<xref rid="b22-BR-23-6-02064" ref-type="bibr">22</xref>,<xref rid="b23-BR-23-6-02064" ref-type="bibr">23</xref>), together with diminished expression of proapoptotic factors (<italic>BIK</italic>, <italic>PDCD8</italic>, <italic>PDCD5</italic>, <italic>BNIP1</italic>, <italic>DAPK1</italic> and <italic>CCAR2</italic>) (<xref rid="b24-BR-23-6-02064" ref-type="bibr">24</xref>,<xref rid="b25-BR-23-6-02064" ref-type="bibr">25</xref>). The overexpression of <italic>BCL2L2</italic> has been associated with an aggressive and radioresistant BC phenotype (<xref rid="b22-BR-23-6-02064" ref-type="bibr">22</xref>).</p>
<p><italic>Genes involved in metabolism are associated with chemoresistance.</italic> Diabetes and hyperglycemia are frequently associated with metabolic disorders. The data suggest that cancer metabolism is intimately linked to drug resistance. The enrichment analysis indicates the differential expression of numerous genes for components of membranes and ribosomes in HG conditions. The first is related to metabolite and ion transporters, and suggests the reprogramming of solute interchange (ions and nutrients) through the cell membranes. The second could be associated with the increased synthesis of proteins.</p>
<p>The reprogramming of membrane transport is suggested because of changes in the expression of 27 solute carrier transporters (SLC) and 10 ATP-dependent transporters in the HG condition (<xref rid="tII-BR-23-6-02064" ref-type="table">Tables II</xref>, <xref rid="SD1-BR-23-6-02064" ref-type="supplementary-material">SI</xref> and <xref rid="SD2-BR-23-6-02064" ref-type="supplementary-material">SII</xref>). The overexpression of SLC that controls the entry of essential amino acids, monocarboxylates, vitamins, glucose, nucleotides and organic cations indicates an increased flux of nutrients, favoring the biosynthetic and energetic demands of cancer cells. The SLC may be novel therapeutic targets and predictive markers of chemoresistance. Among the transporter-coding genes upregulated in the HG condition, <italic>SLC6A6</italic> (4.05 fold) and <italic>SLC39A7</italic> (1.57-fold) have been related to multidrug and cisplatin resistance in colorectal and non-small cell lung cancers (<xref rid="b16-BR-23-6-02064" ref-type="bibr">16</xref>,<xref rid="b29-BR-23-6-02064" ref-type="bibr">29</xref>).</p>
<p>The dysregulation of genes coding for ribosomal proteins promotes BC metastasis. Among them, <italic>RPS13</italic> was upregulated more than 2-fold during HG treatment and promoted drug resistance in gastric cancer cells, suppressing apoptosis (<xref rid="b17-BR-23-6-02064" ref-type="bibr">17</xref>).</p>
<p>Recently, changes in lipid metabolism have been recognized as important mediators of drug resistance. The gene coding for 1-acylglycerol-3-phosphate O-acyltransferase 1 (<italic>AGPAT1</italic>) was the most highly overexpressed in HG. It is highly expressed in breast tumor tissues, and it has been proposed as a component of a gene signature for prognosis in BC (<xref rid="b30-BR-23-6-02064" ref-type="bibr">30</xref>). More studies are required to determine its role in chemoresistance under HG conditions; some members of the <italic>AGPAT</italic> gene family are upregulated in multiple cancers and are associated with drug resistance and poor prognosis (<xref rid="b31-BR-23-6-02064" ref-type="bibr">31</xref>).</p>
<p><italic>Crosstalk between different oncogenic signaling pathways in hyperglycemia.</italic> The metabolic alterations and changes in gene expression induced by HG suggest the implication of multiple signaling pathways that favor an aggressive phenotype and chemoresistance in MDA-MB-231 cells. RT-qPCR confirmed the overexpression of <italic>TSPAN1</italic> and <italic>FZD3</italic> genes, and several studies suggested their role in cancer progression and chemoresistance. TSPAN-1 promotes the proliferation and development of a migratory-invasive phenotype through the induction of EMT and activation of the PI3K/Akt signaling (<xref rid="b32-BR-23-6-02064" ref-type="bibr">32</xref>). In addition, the suppression of <italic>TSPAN1</italic> expression prevented BC tumor growth in mice (<xref rid="b18-BR-23-6-02064" ref-type="bibr">18</xref>). These data are in agreement with the high expression of TSPAN1 and FZD3 proteins in breast ductal carcinoma in women of reproductive age (<xref rid="f3-BR-23-6-02064" ref-type="fig">Fig. 3</xref>).</p>
<p>The finding that <italic>FZD3</italic> and other members of the Wnt canonical signaling &#x005B;<italic>WNT1, FZD-4</italic>, disheveled 2 (<italic>DVL2</italic>), lymphoid enhancer factor 1 (<italic>LEF1</italic>) and <italic>LRP8</italic>&#x005D; were overexpressed in a hyperglycemic microenvironment indicates the participation of Wnt signaling in the promotion of an aggressive and chemoresistant phenotype by hyperglycemia, which was supported by the enrichment and the PPI analyses. The altered expression of genes of the Wnt pathway has been related to cancer progression and poor prognosis (<xref rid="b33-BR-23-6-02064" ref-type="bibr">33</xref>,<xref rid="b34-BR-23-6-02064" ref-type="bibr">34</xref>). WNT1 can induce transformation of the mouse mammalian cell line C57MG (<xref rid="b34-BR-23-6-02064" ref-type="bibr">34</xref>). The expression of <italic>WNT1</italic> and <italic>LEF1</italic> is upregulated in human breast carcinoma (<xref rid="b35-BR-23-6-02064" ref-type="bibr">35</xref>). Whereas the upregulation of <italic>FZD4</italic> in glioma cells is correlated with resistance to drug-induced cell death, partly due to the activation of Wnt/&#x03B2;-catenin and downregulation of proapoptotic genes (<italic>CASP3</italic> and <italic>PDCD4</italic>) (<xref rid="b36-BR-23-6-02064" ref-type="bibr">36</xref>). The silencing of <italic>LRP8</italic> by interference RNA attenuates Wnt/&#x03B2;-catenin, decreases the metastatic potential, and sensitizes BC cells to chemotherapy (<xref rid="b37-BR-23-6-02064" ref-type="bibr">37</xref>). As a consequence of the activation of the Wnt pathway, LEF-1 and T cell factor (TCF) form a complex and activate the expression of genes such as <italic>MDR1</italic>, <italic>C-MYC</italic>, <italic>MET</italic>, <italic>MMP7</italic>, <italic>C-JUN</italic> and <italic>CCND1</italic>, contributing to carcinogenesis and tumor progression in several cancers (<xref rid="b33-BR-23-6-02064" ref-type="bibr">33</xref>,<xref rid="b35-BR-23-6-02064" ref-type="bibr">35</xref>). In MCF7 BC cells, LEF1 induces resistance to docetaxel (DTX), and the inhibition of LEF1 with quercetin reestablishes sensitivity to DTX (<xref rid="b38-BR-23-6-02064" ref-type="bibr">38</xref>). LEF1 is a transcription factor that controls gene expression dependent or independent of Wnt/&#x03B2;-catenin signaling and increases the expression of EMT effectors, such as snail, vimentin and N-cadherin; the gene that encodes N-cadherin, <italic>CDH2</italic>, was also found to be overexpressed in the HG condition (<xref rid="SD1-BR-23-6-02064" ref-type="supplementary-material">Table SI</xref>). The potential role of the Wnt pathway in the promotion of BC under hyperglycemic conditions requires further studies.</p>
<p>The non-canonical signaling of Wnt can also be implicated in the promotion of BC by hyperglycemia. Two genes that encode CDC42 effectors were overexpressed by 2-fold in HG conditions, including CDC42 binding protein kinase alpha and CDC42 small effector 1. The binding of WNT1 with FZD-3 induces the activation of CDC42 in a &#x03B2;-catenin independent signaling, and CDC42 induces the reorganization of the cytoskeleton and cell migration (<xref rid="b39-BR-23-6-02064" ref-type="bibr">39</xref>).</p>
<p>As the PPI indicates, the ATM-dependent DNA-repairing pathway is of special interest, considering that platinum salts are DNA-damaging agents. <italic>ATM</italic> improves the ability to repair double-strand DNA breaks and can lead to increased resistance to DNA-damaging chemotherapeutic agents, such as platinum salts (<xref rid="b40-BR-23-6-02064" ref-type="bibr">40</xref>).</p>
<sec>
<title/>
<sec>
<title>Potential genes associated with chemoresistance induced by hyperglycemia</title>
<p>Through the evaluation of hub genes with a greater number of interactions (<xref rid="f4-BR-23-6-02064" ref-type="fig">Fig. 4</xref>), the survival of TNBC patients using the KM plotter (<xref rid="f5-BR-23-6-02064" ref-type="fig">Fig. 5</xref>) and coexpression analysis (<xref rid="f6-BR-23-6-02064" ref-type="fig">Fig. 6</xref>), the authors propose <italic>YBX3</italic> as a central regulator positively correlated with <italic>AREG</italic>, <italic>APP</italic> and <italic>FZD3</italic>, suggesting that these genes may participate in a signaling network that promotes proliferation, invasion and therapy resistance under hyperglycemic conditions. In particular, <italic>YBX3</italic> and <italic>AREG</italic> showed significant prognostic value, as their high expression was associated with reduced survival in patients with BC, highlighting their potential as biomarkers of poor outcome (<xref rid="f5-BR-23-6-02064" ref-type="fig">Fig. 5</xref>).</p>
<p>By contrast, <italic>APP</italic> and <italic>CDH2</italic> did not reach statistical significance in survival analyses, but coexpression studies demonstrated that both genes are positively correlated with <italic>YBX3</italic> (<xref rid="f6-BR-23-6-02064" ref-type="fig">Fig. 6</xref>). This finding suggests that <italic>APP</italic> and <italic>CDH2</italic> may not act as independent prognostic markers, but rather as cooperative elements within <italic>YBX3</italic>-driven regulatory networks, thereby contributing indirectly to tumor progression and aggressiveness. Importantly, recent studies have shown that <italic>YBX3</italic> is overexpressed in multiple cancer types and contributes to chemoresistance by regulating transcriptional and translational programs involved in EMT, proliferation, and survival pathways (<xref rid="b19-BR-23-6-02064" ref-type="bibr">19</xref>,<xref rid="b41-BR-23-6-02064" ref-type="bibr">41</xref>,<xref rid="b42-BR-23-6-02064" ref-type="bibr">42</xref>). Moreover, YBX3 regulates the expression of growth factors and ligands such as <italic>AREG</italic>, creating a positive feedback loop that amplifies growth factor signaling, enhances EMT, and promotes chemoresistance (<xref rid="b43-BR-23-6-02064" ref-type="bibr">43</xref>).</p>
<p>AREG is the primary EGFR ligand in MDA-MB-231 cells, and its binding to EGFR promotes BC growth and metastasis (<xref rid="b44-BR-23-6-02064" ref-type="bibr">44</xref>). APP overexpression drives EMT, proliferation and migration/invasion in BC cells, and it has been proposed as a risk factor for lymph node metastasis and poor prognosis in non-luminal BCs, including TNBC (<xref rid="b45-BR-23-6-02064" ref-type="bibr">45</xref>). CDH2 is a mesenchymal marker induced by EMT that facilitates migration and invasion, and its high expression correlates with poor prognosis in invasive micropapillary BC (<xref rid="b46-BR-23-6-02064" ref-type="bibr">46</xref>,<xref rid="b47-BR-23-6-02064" ref-type="bibr">47</xref>).</p>
<p>Taken together, these findings suggest that while <italic>AREG</italic> and <italic>CDH2</italic> emerge as potential prognostic biomarkers, <italic>APP</italic> and <italic>CDH2</italic> may act primarily as modulators of <italic>YBX3</italic>-driven transcriptional networks that support tumor progression rather than serving as independent prognostic indicators. Nevertheless, despite these associations, the current evidence remains insufficient to establish these hub genes as reliable biomarkers, underscoring the need for further validation in larger patient cohorts and in-depth functional studies.</p>
<p>It must be considered that an increase in the mRNA level of a gene is not always followed by an increase in the codified protein, and the protein generally realizes a function in metabolism, secretion, or gene expression regulation. This situation limits the conclusions of the estimations of the OS based on mRNA values, as our data were derived from the KM plot analysis.</p>
<p><italic>Therapeutic implications and resistance bypass strategies.</italic> The present results provide a foundation for therapeutic strategies aimed at overcoming hyperglycemia-induced chemoresistance in TNBC. Previous studies have shown that inhibitors or interfering RNAs targeting <italic>YBX3</italic> increase chemosensitivity, highlighting a promising approach for TNBC (<xref rid="b19-BR-23-6-02064" ref-type="bibr">19</xref>,<xref rid="b42-BR-23-6-02064" ref-type="bibr">42</xref>). Other potential therapeutic targets include metabolic reprogramming and transporter activity, considering the <italic>SLC6A6</italic>, <italic>SLC39A7</italic> and <italic>RPS13</italic> genes (<xref rid="b16-BR-23-6-02064" ref-type="bibr">16</xref>,<xref rid="b17-BR-23-6-02064" ref-type="bibr">17</xref>,<xref rid="b29-BR-23-6-02064" ref-type="bibr">29</xref>), which are overexpressed in HG and aforementioned. Pharmacological inhibition of these transporters, or modulation of glucose and lipid metabolism, could sensitize TNBC cells to chemotherapy. Combined strategies that target metabolic and oncogenic signaling pathways may prove particularly effective. The inhibition of the Wnt/&#x03B2;-catenin pathway or ATM-mediated DNA repair, in combination with chemotherapy, could synergistically reduce tumors. These findings support a framework for personalized combinatorial therapies in diabetic patients with BC, integrating metabolic modulators, inhibitors of <italic>YBX3</italic>-regulated networks, and conventional chemotherapeutics to overcome resistance and improve clinical outcomes.</p>
<p><italic>Limitations of the present study.</italic> The present study has potential limitations. It was based on the analysis of the changes induced by HG in an invasive BC cell line, using an <italic>in vitro</italic> experimental and bioinformatics approach. Although the MDA-MB-231 cell line has been widely used as a model of invasive BC, it does not represent the genetic heterogeneity of invasive breast tumors. Therefore, the current findings need to be validated in other experimental models and clinical cohorts. However, the present study provides important insights and allows us to better understand the behavior of this type of cancer under HG conditions, as well as to identify potential signaling pathways and genes associated with chemoresistance and prognosis in patients with T2DM.</p>
<p>Although the use of <italic>HPRT</italic> as a housekeeping gene is considered unreliable for comparing the gene expression between cancerous and non-cancerous tissues (<xref rid="b48-BR-23-6-02064" ref-type="bibr">48</xref>), this gene has been recommended in hyperglycemic conditions (<xref rid="b13-BR-23-6-02064" ref-type="bibr">13</xref>), and its expression is moderately stable in BC cell lines (<xref rid="b12-BR-23-6-02064" ref-type="bibr">12</xref>), although in hyperglycemic conditions, it has been validated in other types of cells. Therefore, the use of an additional reference gene is recommended to further consolidate the overexpression of <italic>TSPAN</italic> and <italic>FZD3</italic> genes.</p>
<p>The present findings and bibliographic references suggest that <italic>TSPAN1</italic> and <italic>FZD3</italic> play an important role in the induction of chemoresistant and invasive phenotypes by HG (<xref rid="b18-BR-23-6-02064" ref-type="bibr">18</xref>,<xref rid="b32-BR-23-6-02064" ref-type="bibr">32</xref>). However, gene knockdown experiments are required to better understand their roles.</p>
<p>The clinical implications were partially validated using public patient datasets and informatics platforms; however, these platforms are generally based on non-diabetic patients, and the estimation of the effect of selected overexpressed genes on OS was therefore performed in non-diabetic conditions. These results should be interpreted with caution, highlighting the need for further validation in diabetic patient cohorts.</p>
<p>Additionally, both diabetes and cancer are complex processes involving multiple genetic and environmental contexts; therefore, further studies are required to validate the clinical implications of our findings. These include validation at both protein (western blotting and IHC) and mRNA (RT-qPCR) levels of overexpressed genes (<italic>FZD3</italic> and <italic>TSPAN1</italic>), as well as of potential genes associated with chemoresistance and prognosis (<italic>AREG</italic> and <italic>YBX3</italic>) in breast tumor tissues of diabetic patients.</p>
<p>In addition, changes in gene expression and the induction of cisplatin chemoresistance by diabetes in a mouse model of syngeneic BC are currently studied, and patient-derived organoids can be used to analyze cisplatin action under HG conditions in human tissues. Finally, the correlation of the selected genes and clinical outcomes should be studied in other patient cohorts, preferably in diabetic patients with BC.</p>
<p>In conclusion, these data indicate that alterations in gene expression induced by hyperglycemia lead to changes in the metabolism of cancer cells, affecting a variety of processes that promote a more aggressive phenotype through the activation of Wnt/&#x03B2;-catenin, NF-&#x03BA;B survival, angiogenesis and PI3K/AKT signaling, contributing to enhanced proliferation, migration, invasion and inhibition of apoptosis. Some potential biomarkers of cisplatin resistance under hyperglycemia could be <italic>AREG</italic> and <italic>YBX3</italic>.</p>
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<sec sec-type="supplementary-material">
<title>Supplementary Material</title>
<supplementary-material id="SD1-BR-23-6-02064" content-type="local-data">
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<title>Upregulated genes in MDA-MB-231 cells supplemented with glucose 30 mmo/l.</title>
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<supplementary-material id="SD2-BR-23-6-02064" content-type="local-data">
<caption>
<title>Downregulated genes in MDA-MB-231 cells supplemented with glucose 30 mmo/l.</title>
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<ack>
<title>Acknowledgements</title>
<p>The authors would like to thank Ms Lorena Ch&#x00E1;vez, Dr Jos&#x00E9; Luis Santill&#x00E1;n, Mr Sim&#x00F3;n Guzm&#x00E1;n and Dr Jorge Ram&#x00ED;rez for performing the microarray analysis at the Instituto de Fisiolog&#x00ED;a Celular, National Autonomous University of Mexico. The authors thank student Mr Jael Guti&#x00E9;rrez Savedra for his technical assistance, and Dr Leticia Moreno Fierros for her technical advice &#x005B;both are affiliated to the National Autonomous University of Mexico (UNAM), FES-Iztacala&#x005D;.</p>
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<sec sec-type="data-availability">
<title>Availability of data and materials</title>
<p>The data generated in the present study may be found in the Gene Expression Omnibus under accession number GSE136277 or at the following URL: <ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE136277">https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE136277</ext-link>. The data generated in the present study are included in the figures and/or tables of this article.</p>
</sec>
<sec>
<title>Authors&#x0027; contributions</title>
<p>ARVR, MGMH and LABG contributed to the conception and design of the study. ARVR, MGMH, LAFL, M&#x00C1;VF, RREG and JRPB performed material preparation, data collection and analysis. ARVR and LABG wrote the first draft of the manuscript. All authors commented on previous versions of the manuscript. All authors read and approved the final version of the manuscript<italic>.</italic> ARVR and LABG confirm the authenticity of all the raw data.</p>
</sec>
<sec>
<title>Ethics approval and consent to participate</title>
<p>Not applicable.</p>
</sec>
<sec>
<title>Patient consent for publication</title>
<p>Not applicable.</p>
</sec>
<sec sec-type="COI-statement">
<title>Competing interests</title>
<p>The authors declare that they have no competing interests.</p>
</sec>
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<floats-group>
<fig id="f1-BR-23-6-02064" position="float">
<label>Figure 1</label>
<caption><p>HG attenuates the effect of cisplatin on the cell population and prevents apoptosis. (A and B) MDA-MB-231 cells were treated for 48 h with CCP. The growth of the cell population was evaluated by the MTT assay in standard, (NG), HG, and mannitol osmotic control (NG Mannitol) culture conditions. <sup>&#x002A;</sup>P&#x2264;0.01 and <sup>&#x002A;&#x002A;</sup>P&#x2264;0.001 vs. the respective NG for each cisplatin concentration. No significant differences were observed between the NG and mannitol-treated groups. (C-E) Additionally, the activation of caspase 3 was evaluated by western blotting and densitometry in lysates of cells cultured for 48 h, in NG and HG conditions, and treated with cisplatin (NG/CCP and HG/CCP). The intensities of the bands were calculated after background subtraction, and the sum of the bands (total caspase 3) and active caspase 3 were normalized to (D) &#x03B2;-actin and (E) procaspase 3, respectively. Data are presented as the mean &#x00B1; SD of three independent experiments. <sup>&#x002A;</sup>P&#x2264;0.05 and <sup>&#x002A;&#x002A;&#x002A;</sup>P<italic>&#x2264;</italic>0.001 vs. NG, and + P<italic>&#x2264;</italic>0.001 vs. HG. HG, high glucose; NG, normal glucose; CCP, cisplatin.</p></caption>
<graphic xlink:href="br-23-06-02064-g00.tif"/>
</fig>
<fig id="f2-BR-23-6-02064" position="float">
<label>Figure 2</label>
<caption><p>Gene enrichment analysis. (A and B) Gene Ontology terms of the significantly upregulated and downregulated genes for (A) the cellular components and (B) molecular function categories. (C) Wikipathways gene enrichment analysis in a hyperglycemia microenvironment.</p></caption>
<graphic xlink:href="br-23-06-02064-g01.tif"/>
</fig>
<fig id="f3-BR-23-6-02064" position="float">
<label>Figure 3</label>
<caption><p>Expression of FZD3 and TSPAN1 in breast cancer by IHC and RT-qPCR. (A) Expression of FZD3 and TSPAN1 was analyzed by IHC using images obtained from the Human Protein Atlas. Brown staining indicates the presence of FZD3 and TSPAN1, showing higher expression in ductal carcinoma compared with control groups, including adenoma and normal breast tissue. (B) MDA-MB-231 cells were cultured in NG and HG. Total RNA was isolated 48 h after treatment, and mRNA was evaluated by RT-qPCR. These results are consistent with the microarray data. Media &#x00B1; standard deviation of three experiments with two replicates each. <sup>&#x002A;&#x002A;&#x002A;</sup>P<italic>&#x2264;</italic>0.001 vs. NG. IHC, immunochemistry; RT-qPCR, reverse transcription-quantitative PCR; HG, high glucose; NG, normal glucose.</p></caption>
<graphic xlink:href="br-23-06-02064-g02.tif"/>
</fig>
<fig id="f4-BR-23-6-02064" position="float">
<label>Figure 4</label>
<caption><p>Major 50 hub genes interaction. These genes were selected using the String network of protein-protein interaction, considering those overexpressed with a fold change &#x003E;1.5, followed by hub selection using Cytohubba. The nodes with major degree scores are shown in a decreasing scale from red to yellow. Data show gene hubs such as <italic>BIRC2, DVL-2, WNT1</italic> and <italic>ATM</italic>, which have regulatory functions associated with the WNT/&#x03B2;-catenin signaling pathways, apoptosis, and ATM-dependent DNA damage repair.</p></caption>
<graphic xlink:href="br-23-06-02064-g03.tif"/>
</fig>
<fig id="f5-BR-23-6-02064" position="float">
<label>Figure 5</label>
<caption><p>Prognostic biomarkers in hyperglycemia. (A-D) KM survival curves were performed using the KM-plotter platform, considering the mRNA expression levels of (A) <italic>CSDA</italic> (<italic>YBX3</italic>), (B) <italic>AREG</italic>, (C) <italic>APP</italic> and (D) <italic>CDH2</italic> for patients with breast cancer, negative to estrogen, progesterone, and HER2 receptors for IHC and microarrays. KM, Kaplan-Meier; HR, hazard ratio.</p></caption>
<graphic xlink:href="br-23-06-02064-g04.tif"/>
</fig>
<fig id="f6-BR-23-6-02064" position="float">
<label>Figure 6</label>
<caption><p>Correlation analysis of gene hubs. (A-D) Correlation analysis of gene expression was performed using the R2 Genomics platform (<ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://r2.amc.nl">http://r2.amc.nl</ext-link>) in a cohort of 1,097 patients diagnosed with breast invasive carcinoma (TCGA), aged 26 to 90 years, with heterogeneous hormone receptor status (ER<sup>+</sup> 71.7&#x0025;, ER<sup>-</sup> 22&#x0025;, PR<sup>+</sup> 63.7&#x0025;, PR<sup>-</sup> 31.4&#x0025;, HER2<sup>+</sup> 14&#x0025;, and HER2<sup>-</sup> 51.3&#x0025;), and metastatic condition (M0 82.6&#x0025;, MX 14.8&#x0025; and M1 2&#x0025;). Scatter plots show the relationships between (A) <italic>APP</italic> and <italic>YBX3</italic>, (B) <italic>YBX3</italic> and <italic>FZD3</italic>, (C) <italic>AREG</italic> and <italic>YBX3</italic>, and (D) <italic>CDH2</italic> and <italic>YBX3</italic>. Each plot includes a regression line, the Pearson correlation coefficient (R), and the statistical significance (P-value). TCGA, The Cancer Genome Atlas.</p></caption>
<graphic xlink:href="br-23-06-02064-g05.tif"/>
</fig>
<table-wrap id="tI-BR-23-6-02064" position="float">
<label>Table I</label>
<caption><p>Top 15 upregulated and downregulated genes in a hyperglycemic environment.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="middle" colspan="4">Upregulated</th>
</tr>
<tr>
<th align="left" valign="middle">ID</th>
<th align="center" valign="middle">Genes</th>
<th align="center" valign="middle">Z score</th>
<th align="center" valign="middle">Full name</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="middle">NM_032741</td>
<td align="left" valign="middle"><italic>AGPAT1</italic></td>
<td align="left" valign="middle">4.152511</td>
<td align="left" valign="middle">1-Acylglycerol-3-phosphate O-acyltransferase 1</td>
</tr>
<tr>
<td align="left" valign="middle">NM_003043</td>
<td align="left" valign="middle"><italic>SLC6A6</italic></td>
<td align="left" valign="middle">4.058222</td>
<td align="left" valign="middle">Taurine transporter</td>
</tr>
<tr>
<td align="left" valign="middle">NM_005727</td>
<td align="left" valign="middle"><italic>TSPAN-1</italic></td>
<td align="left" valign="middle">3.811546</td>
<td align="left" valign="middle">Tetraspanin 1</td>
</tr>
<tr>
<td align="left" valign="middle">NM_004189</td>
<td align="left" valign="middle"><italic>SOX14</italic></td>
<td align="left" valign="middle">3.648091</td>
<td align="left" valign="middle">SRY-box 14</td>
</tr>
<tr>
<td align="left" valign="middle">NM_021625</td>
<td align="left" valign="middle"><italic>TRPV4</italic></td>
<td align="left" valign="middle">3.609894</td>
<td align="left" valign="middle">Transient receptor potential cation channel subfamily V member 4</td>
</tr>
<tr>
<td align="left" valign="middle">NM_016176</td>
<td align="left" valign="middle"><italic>SDF4</italic></td>
<td align="left" valign="middle">3.445534</td>
<td align="left" valign="middle">Stromal cell derived factor 4</td>
</tr>
<tr>
<td align="left" valign="middle">NM_006213</td>
<td align="left" valign="middle"><italic>PHKG1</italic></td>
<td align="left" valign="middle">3.320789</td>
<td align="left" valign="middle">Phosphorylase kinase catalytic subunit gamma 1</td>
</tr>
<tr>
<td align="left" valign="middle">NM_020649</td>
<td align="left" valign="middle"><italic>CBX8</italic></td>
<td align="left" valign="middle">3.251316</td>
<td align="left" valign="middle">Chromobox 8</td>
</tr>
<tr>
<td align="left" valign="middle">NM_001252</td>
<td align="left" valign="middle"><italic>TNFSF7</italic></td>
<td align="left" valign="middle">3.129304</td>
<td align="left" valign="middle">CD70 molecule</td>
</tr>
<tr>
<td align="left" valign="middle">NM_005919</td>
<td align="left" valign="middle"><italic>MEF2B</italic></td>
<td align="left" valign="middle">3.041269</td>
<td align="left" valign="middle">BORCS8-MEF2B readthrough</td>
</tr>
<tr>
<td align="left" valign="middle">NM_002600</td>
<td align="left" valign="middle"><italic>PDE4B</italic></td>
<td align="left" valign="middle">3.035975</td>
<td align="left" valign="middle">Phosphodiesterase 4B</td>
</tr>
<tr>
<td align="left" valign="middle">NM_002150</td>
<td align="left" valign="middle"><italic>HPD</italic></td>
<td align="left" valign="middle">2.983852</td>
<td align="left" valign="middle">4-Hydroxyphenylpyruvate dioxygenase</td>
</tr>
<tr>
<td align="left" valign="middle">NM_014610</td>
<td align="left" valign="middle"><italic>GANAB</italic></td>
<td align="left" valign="middle">2.950495</td>
<td align="left" valign="middle">Glucosidase II alpha subunit</td>
</tr>
<tr>
<td align="left" valign="middle">NM_017412</td>
<td align="left" valign="middle"><italic>FZD3</italic></td>
<td align="left" valign="middle">2.854118</td>
<td align="left" valign="middle">Frizzled class receptor 3</td>
</tr>
<tr>
<td align="left" valign="middle" colspan="4">Downregulated</td>
</tr>
<tr>
<td align="left" valign="middle">NM_006544</td>
<td align="left" valign="middle"><italic>SEC10L1</italic></td>
<td align="left" valign="middle">-4.523611</td>
<td align="left" valign="middle">Exocyst complex component 5</td>
</tr>
<tr>
<td align="left" valign="middle">NM_012261</td>
<td align="left" valign="middle"><italic>LAMP5</italic></td>
<td align="left" valign="middle">-4.45501</td>
<td align="left" valign="middle">Lysosomal associated membrane protein family member 5</td>
</tr>
<tr>
<td align="left" valign="middle">NM_012070</td>
<td align="left" valign="middle"><italic>ATRN</italic></td>
<td align="left" valign="middle">-4.333672</td>
<td align="left" valign="middle">Attractin</td>
</tr>
<tr>
<td align="left" valign="middle">NM_004185</td>
<td align="left" valign="middle"><italic>WNT2B</italic></td>
<td align="left" valign="middle">-3.908675</td>
<td align="left" valign="middle">Wnt family member 2B</td>
</tr>
<tr>
<td align="left" valign="middle">NM_001697</td>
<td align="left" valign="middle"><italic>ATP5O</italic></td>
<td align="left" valign="middle">-3.87772</td>
<td align="left" valign="middle">ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit</td>
</tr>
<tr>
<td align="left" valign="middle">NM_053004</td>
<td align="left" valign="middle"><italic>FLJ21125</italic></td>
<td align="left" valign="middle">-3.814458</td>
<td align="left" valign="middle">G protein subunit beta 1 like</td>
</tr>
<tr>
<td align="left" valign="middle">NM_003692</td>
<td align="left" valign="middle"><italic>TMEFF1</italic></td>
<td align="left" valign="middle">-3.744839</td>
<td align="left" valign="middle">Transmembrane protein with EGF like and two follistatin like domains 1</td>
</tr>
<tr>
<td align="left" valign="middle">NM_006866</td>
<td align="left" valign="middle"><italic>LILRB1</italic></td>
<td align="left" valign="middle">-3.717488</td>
<td align="left" valign="middle">Leukocyte immunoglobulin like receptor A2</td>
</tr>
<tr>
<td align="left" valign="middle">NM_003072</td>
<td align="left" valign="middle"><italic>SMARCA4</italic></td>
<td align="left" valign="middle">-3.709549</td>
<td align="left" valign="middle">SWI/SNF related, matrix associated, actin-dependent regulator of chromatin, subfamily A, member 4</td>
</tr>
<tr>
<td align="left" valign="middle">NM_021176</td>
<td align="left" valign="middle"><italic>G6PC2</italic></td>
<td align="left" valign="middle">-3.584369</td>
<td align="left" valign="middle">Glucose-6-phosphatase catalytic subunit 2</td>
</tr>
<tr>
<td align="left" valign="middle">NM_004937</td>
<td align="left" valign="middle"><italic>CTNS</italic></td>
<td align="left" valign="middle">-3.50955</td>
<td align="left" valign="middle">Cystinosin, lysosomal cystine transporter</td>
</tr>
<tr>
<td align="left" valign="middle">NM_004208</td>
<td align="left" valign="middle"><italic>PDCD8</italic></td>
<td align="left" valign="middle">-3.506222</td>
<td align="left" valign="middle">Apoptosis-inducing factor, mitochondrion-associated, 1</td>
</tr>
<tr>
<td align="left" valign="middle">NM_013335</td>
<td align="left" valign="middle"><italic>GMPPA</italic></td>
<td align="left" valign="middle">-3.505725</td>
<td align="left" valign="middle">GDP-mannose pyrophosphorylase A</td>
</tr>
<tr>
<td align="left" valign="middle">NM_017882</td>
<td align="left" valign="middle"><italic>CLN6</italic></td>
<td align="left" valign="middle">-3.495366</td>
<td align="left" valign="middle">Ceroid-lipofuscinosis, neuronal 6, late infantile, variant</td>
</tr>
<tr>
<td align="left" valign="middle">NM_022444</td>
<td align="left" valign="middle"><italic>SLC13A1</italic></td>
<td align="left" valign="middle">-3.435806</td>
<td align="left" valign="middle">Solute carrier family 13 (sodium/sulfate symporters), member 1</td>
</tr>
</tbody>
</table>
</table-wrap>
<table-wrap id="tII-BR-23-6-02064" position="float">
<label>Table II</label>
<caption><p>Kyoto Encyclopedia of Genes and Genomes pathways associated with genes regulated by hyperglycemia.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th align="left" valign="middle"><italic>Metabolic</italic> or signaling pathway</th>
<th align="center" valign="middle">Total genes</th>
<th align="center" valign="middle">Genes upregulated</th>
<th align="center" valign="middle">Genes downregulated</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left" valign="middle">Transmembrane transport</td>
<td align="center" valign="middle">27</td>
<td align="left" valign="middle"><italic>SLC6A6</italic>, <italic>SLC44A4</italic>, <italic>SLC35F2</italic>, <italic>SLC16A8</italic>, <italic>SLC13A2</italic>, <italic>SLC6A20</italic>, <italic>SLC23A2</italic>, <italic>SLC25A19</italic>, <italic>SLC39A7</italic>, <italic>SLC22A18AS</italic>, <italic>SLC25A5</italic></td>
<td align="left" valign="middle"><italic>SLC13A1</italic>, <italic>SLC22A7</italic>, <italic>SLC26A3</italic>, <italic>SLC7A7</italic>, <italic>SLC2A8</italic>, <italic>SLC35B3</italic>, <italic>SLC6A12</italic>, <italic>SLC1A7</italic>, <italic>SLC39A6</italic>, <italic>SLC39A4</italic>, <italic>SLC35C2</italic>, <italic>SLC38A3</italic>, <italic>SLC16A10</italic>, <italic>SLC44A2</italic>, <italic>SLC25A17</italic>, <italic>SLC28A2</italic></td>
</tr>
<tr>
<td align="left" valign="middle">Cytokine-cytokine receptor interaction</td>
<td align="center" valign="middle">24</td>
<td align="left" valign="middle"><italic>CXCL1</italic>, <italic>CXCR3</italic>, <italic>PDGFRA</italic>, <italic>IL9R</italic>, <italic>IL21R</italic>, <italic>IL1RA</italic>, <italic>EPOR</italic>, <italic>IL17RA</italic>, <italic>IL17RB</italic>, <italic>TNFSF7</italic>, <italic>CCL20</italic>, <italic>IL32</italic></td>
<td align="left" valign="middle"><italic>TNIP2</italic>, <italic>CCR9</italic>, <italic>CXCR2</italic>, <italic>CXCR4</italic>, <italic>CXCR6</italic>, <italic>CCRL1</italic>, <italic>TGFBR2</italic>, <italic>TGFBR1</italic>, <italic>CXCL6</italic>, <italic>IFNA8</italic>, <italic>IL4</italic>, <italic>IL17C</italic></td>
</tr>
<tr>
<td align="left" valign="middle">Regulation of cytoskeleton</td>
<td align="center" valign="middle">24</td>
<td align="left" valign="middle"><italic>CHRM4</italic>, <italic>FGFR1</italic>, <italic>PDGFRA</italic>, <italic>VAV3</italic>, <italic>CFL</italic>, <italic>ITGB4</italic>, <italic>RASAL-1</italic>, <italic>RIN1</italic>, <italic>CDC42BPA</italic>, <italic>RAB9A</italic>, <italic>RHOB</italic></td>
<td align="left" valign="middle"><italic>PIK3C2B</italic>, <italic>PIK3R5</italic>, <italic>CHRM1</italic>, <italic>FGF20</italic>, <italic>FGFR2</italic>, <italic>ACTN3</italic>, <italic>VCL</italic>, <italic>VAV2</italic>, <italic>ILK</italic>, <italic>ARHGDIB</italic>, <italic>RDX</italic>, <italic>RRAS</italic>, <italic>RASSF7</italic></td>
</tr>
<tr>
<td align="left" valign="middle">Ribosomal proteins (extra and intramitochondrial)</td>
<td align="center" valign="middle">20</td>
<td align="left" valign="middle"><italic>RPS13</italic>, <italic>RPS17</italic>, <italic>RPS21</italic>, <italic>RPS3A</italic>, <italic>RPS8</italic>, <italic>RPS7</italic>, <italic>RPL23A</italic>, <italic>RPL13A</italic>, <italic>RPL15</italic>, <italic>RPL9</italic>, <italic>MRPS18B</italic>, <italic>MRPS7</italic>, <italic>MRPL15</italic>, <italic>MRLP17</italic>, <italic>MRPL49</italic></td>
<td align="left" valign="middle"><italic>MRPS31</italic>, <italic>MRPL11</italic>, <italic>RPL23</italic>, <italic>MRPL33</italic>, <italic>MRPL42</italic></td>
</tr>
<tr>
<td align="left" valign="middle">Purine, pyrimidine metabolism/nucleic acid synthesis</td>
<td align="center" valign="middle">22</td>
<td align="left" valign="middle"><italic>XDH</italic>, <italic>POLA2</italic>, <italic>POLG</italic>, <italic>GUCY2F</italic>, <italic>PDE1B</italic>, <italic>PAPSS2</italic>, <italic>PDE2A</italic>, <italic>UPB1</italic>, <italic>PDE4B</italic>, <italic>ADCY7</italic>, <italic>NME1</italic>, <italic>ECGF</italic>, <italic>NOC3L</italic>, <italic>ATIC</italic></td>
<td align="left" valign="middle"><italic>CDA</italic>, <italic>NT5E</italic>, <italic>AK3</italic>, <italic>AMPD2</italic>, <italic>AMPD3</italic>, <italic>ADA2</italic>, <italic>MTAP</italic>, <italic>DNPH1</italic></td>
</tr>
<tr>
<td align="left" valign="middle">MAPK</td>
<td align="center" valign="middle">20</td>
<td align="left" valign="middle"><italic>FGFR1</italic>, <italic>PDGFRA</italic>, <italic>MKNK</italic>, <italic>DUSP4</italic>, <italic>RIN1</italic>, <italic>MAPK8IP1</italic>, <italic>RASGRF1</italic></td>
<td align="left" valign="middle"><italic>PPP3C</italic>, <italic>FGF20</italic>, <italic>TGFBR2</italic>, <italic>MAP2K3</italic>, <italic>MAPKAPK5</italic>, <italic>MEF2C</italic>, <italic>BLK</italic>, <italic>DUSP5</italic>, <italic>TGFBR1</italic>, <italic>FGFR2</italic>, <italic>RRAS</italic>, <italic>RAPGEF2</italic>, <italic>RASSF7</italic></td>
</tr>
<tr>
<td align="left" valign="middle">Ras</td>
<td align="center" valign="middle">19</td>
<td align="left" valign="middle"><italic>FGFR1</italic>, <italic>PDGFRA</italic>, <italic>TEK</italic>, <italic>RIN1</italic>, <italic>RASGRF1</italic>, <italic>SPEC1</italic>, <italic>RASAL-1</italic>, <italic>RIN1</italic></td>
<td align="left" valign="middle"><italic>PIK3C2B</italic>, <italic>PIK3R5</italic>, <italic>FGF20</italic>, <italic>GNB1</italic>, <italic>FGFR2</italic>, <italic>ANGPT1</italic>, <italic>RRAS</italic>, <italic>RALA</italic>, <italic>RAPGEF2</italic>, <italic>RASSF7</italic>, <italic>PLAAT1</italic></td>
</tr>
<tr>
<td align="left" valign="middle">Apoptosis</td>
<td align="center" valign="middle">19</td>
<td align="left" valign="middle"><italic>TRAF1</italic>, <italic>CASP10</italic>, <italic>XIAP</italic>, <italic>BCL2L2</italic>, <italic>BIRC2</italic>, <italic>RHOB</italic>, <italic>PERP</italic></td>
<td align="left" valign="middle"><italic>PTPN13</italic>, <italic>PIK3C2B</italic>, <italic>PIK3R5</italic>, <italic>PDCD8</italic>, <italic>PDCD5</italic>, <italic>BIRC3</italic>, <italic>BIK</italic>, <italic>DAPK1</italic>, <italic>CCAR2</italic>, <italic>BNIP1</italic>, <italic>TNIP2</italic>, <italic>RASSF7</italic></td>
</tr>
<tr>
<td align="left" valign="middle">Wnt &#x03B2;-catenin</td>
<td align="center" valign="middle">17</td>
<td align="left" valign="middle"><italic>FZD3</italic>, <italic>FZD4</italic>, <italic>LPR8</italic>, <italic>DVL2</italic>, <italic>WNT1</italic>, <italic>LEF1</italic>, <italic>DKKL1</italic>, <italic>RHOB</italic>, <italic>PPP2R3B</italic></td>
<td align="left" valign="middle"><italic>WNT2B</italic>, <italic>TGFBR2</italic>, <italic>BMP2</italic>, <italic>TGFBR1</italic>, <italic>ID1</italic>, <italic>PPP3CA</italic>, <italic>TBL1</italic>, <italic>CAMK2B</italic></td>
</tr>
<tr>
<td align="left" valign="middle">Focal adhesion</td>
<td align="center" valign="middle">17</td>
<td align="left" valign="middle"><italic>PDGFRA</italic>, <italic>XIAP</italic>, <italic>VAV3</italic>, <italic>LAMC2</italic>, <italic>ITGB4</italic>, <italic>PPP2R5B</italic>, <italic>PPP2R5C</italic>, <italic>RASGRF1</italic></td>
<td align="left" valign="middle"><italic>PIK3C2B</italic>, <italic>PIK3R5</italic>, <italic>THBS2S</italic>, <italic>ACTN3</italic>, <italic>VCL</italic>, <italic>BLK</italic>, <italic>VAV2</italic>, <italic>BIRC2</italic>, <italic>ILK</italic></td>
</tr>
<tr>
<td align="left" valign="middle">Glycerophospholipid metabolism</td>
<td align="center" valign="middle">16</td>
<td align="left" valign="middle"><italic>AGPAT1</italic>, <italic>MBOAT7</italic>, <italic>CEPT1</italic>, <italic>GLA</italic>, <italic>PNLIPRP2</italic>, <italic>ACHE</italic>, <italic>LYPLA1</italic>, <italic>PLA2G2A</italic></td>
<td align="left" valign="middle"><italic>AGPAT4</italic>, <italic>CDIPT</italic>, <italic>CHPT1</italic>, <italic>PCYT1B</italic>, <italic>PLA2G2D</italic>, <italic>TAZ</italic>, <italic>PAFAH1B3</italic>, <italic>PLAAT1</italic></td>
</tr>
<tr>
<td align="left" valign="middle">Jak-STAT</td>
<td align="center" valign="middle">14</td>
<td align="left" valign="middle"><italic>PIM1</italic>, <italic>PIAS1</italic>, <italic>IL9R</italic>, <italic>IL21R</italic>, <italic>EPOR</italic>, <italic>PTPN6</italic></td>
<td align="left" valign="middle"><italic>PIK3C2B</italic>, <italic>PIK3R5</italic>, <italic>BLK</italic>, <italic>SOCS5</italic>, <italic>IFNA8</italic>, <italic>IL4</italic>, <italic>IL17C</italic>, <italic>GFAP</italic></td>
</tr>
<tr>
<td align="left" valign="middle">Oxidative phosphorylation</td>
<td align="center" valign="middle">10</td>
<td align="left" valign="middle"><italic>COX4I1</italic>, <italic>COX6A1</italic>, <italic>COX7B</italic>, <italic>NDUFB3</italic></td>
<td align="left" valign="middle"><italic>ATP5O</italic>, <italic>ATP5D</italic>, <italic>COX7A1</italic>, <italic>NDUFA13</italic>, <italic>NDUFB4</italic>, <italic>E2IG2</italic></td>
</tr>
</tbody>
</table>
</table-wrap>
</floats-group>
</article>
