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<?release-delay 0|0?>
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">ETM</journal-id>
<journal-title-group>
<journal-title>Experimental and Therapeutic Medicine</journal-title></journal-title-group>
<issn pub-type="ppub">1792-0981</issn>
<issn pub-type="epub">1792-1015</issn>
<publisher>
<publisher-name>D.A. Spandidos</publisher-name></publisher></journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3892/etm.2014.2032</article-id>
<article-id pub-id-type="publisher-id">etm-08-06-1695</article-id>
<article-categories>
<subj-group>
<subject>Articles</subject></subj-group></article-categories>
<title-group>
<article-title>Analysis of tumor necrosis factor &#x003B1;-induced and nuclear factor &#x003BA;B-silenced LNCaP prostate cancer cells by RT-qPCR</article-title></title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>GONEN-KORKMAZ</surname><given-names>CEREN</given-names></name><xref ref-type="corresp" rid="c1-etm-08-06-1695"/></contrib>
<contrib contrib-type="author">
<name><surname>SEVIN</surname><given-names>GULNUR</given-names></name></contrib>
<contrib contrib-type="author">
<name><surname>GOKCE</surname><given-names>GOKSEL</given-names></name></contrib>
<contrib contrib-type="author">
<name><surname>ARUN</surname><given-names>MEHMET ZUHURI</given-names></name></contrib>
<contrib contrib-type="author">
<name><surname>YILDIRIM</surname><given-names>GOKCE</given-names></name></contrib>
<contrib contrib-type="author">
<name><surname>REEL</surname><given-names>BUKET</given-names></name></contrib>
<contrib contrib-type="author">
<name><surname>KAYMAK</surname><given-names>AYSEGUL</given-names></name></contrib>
<contrib contrib-type="author">
<name><surname>OGUT</surname><given-names>DENIZ</given-names></name></contrib>
<aff id="af1-etm-08-06-1695">Department of Pharmacology, Faculty of Pharmacy, Ege University, Izmir 35100, Turkey</aff></contrib-group>
<author-notes>
<corresp id="c1-etm-08-06-1695">Correspondence to: Dr Ceren Gonen-Korkmaz, Department of Pharmacology, Faculty of Pharmacy, Ege University, Bornova, Izmir 35100, Turkey, E-mail: <email>korkmaz_ceren@yahoo.com</email></corresp></author-notes>
<pub-date pub-type="ppub">
<month>12</month>
<year>2014</year></pub-date>
<pub-date pub-type="epub">
<day>17</day>
<month>10</month>
<year>2014</year></pub-date>
<volume>8</volume>
<issue>6</issue>
<fpage>1695</fpage>
<lpage>1700</lpage>
<history>
<date date-type="received">
<day>20</day>
<month>01</month>
<year>2014</year></date>
<date date-type="accepted">
<day>06</day>
<month>10</month>
<year>2014</year></date></history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2014, Spandidos Publications</copyright-statement>
<copyright-year>2014</copyright-year>
<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/3.0">
<license-p>This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited.</license-p></license></permissions>
<abstract>
<p>Prostate cancer is the second leading cause of morbidity and mortality in males in the Western world. In the present study, LNCaP, which is an androgen receptor-positive and androgen-responsive prostate cancer cell line derived from lymph node metastasis, and DU145, which is an androgen receptor-negative prostate cancer cell line derived from brain metastasis, were investigated. TNF&#x003B1; treatment decreased p105 and p50 expression and R1881 treatment slightly decreased p105 expression but increased p50 expression with or without TNF&#x003B1; induction. As an aggressive prostate cancer cell line, DU145 transfected with six transmembrane protein of prostate (STAMP)1 or STAMP2 was also exposed to TNF&#x003B1;. Western blotting indicated that transfection with either STAMP gene caused a significant increase in NF&#x003BA;B expression following TNF&#x003B1; induction. In addition, following the treatment of LNCaP cells with TNF&#x003B1;, reverse transcription quantitative polymerase chain reaction (RT-qPCR) was performed with a panel of apoptosis-related gene primers. The apoptosis-related genes p53, p73, caspase 7 and caspase 9 showed statistically significant increases in expression levels while the expression levels of MDM2 and STAMP1 decreased following TNF&#x003B1; induction. Furthermore, LNCaP cells were transfected with a small interfering NF&#x003BA;B (siNF&#x003BA;B) construct for 1 and 4 days and induced with TNF&#x003B1; for the final 24 h. RT-qPCR amplifications were performed with apoptosis-related gene primers, including p53, caspases and STAMPs. However, no changes in the level of STAMP2 were observed between cells in the presence or absence of TNF&#x003B1; induction or between those transfected or not transfected with siNF&#x003BA;B; however, the level of STAMP1 was significantly decreased by TNF&#x003B1; induction, and significantly increased with siNF&#x003BA;B transfection. Silencing of the survival gene NF&#x003BA;B caused anti-apoptotic STAMP1 expression to increase, which repressed p53, together with MDM2. NF&#x003BA;B silencing had varying effects on a panel of cancer regulatory genes. Therefore, the effective inhibition of NF&#x003BA;B may be critical in providing a targeted pathway for prostate cancer prevention.</p></abstract>
<kwd-group>
<kwd>prostate cancer</kwd>
<kwd>cell culture</kwd>
<kwd>gene silencing</kwd>
<kwd>NF&#x003BA;B</kwd>
<kwd>TNF&#x003B1;</kwd>
<kwd>p53</kwd>
<kwd>STAMP genes</kwd></kwd-group></article-meta></front>
<body>
<sec sec-type="intro">
<title>Introduction</title>
<p>Prostate cancer is the most commonly diagnosed cancer and the second leading cause of cancer mortality in males in the Western world. Human prostate adenocarcinoma cell lines are normally resistant to programmed cell death, known as apoptosis (<xref rid="b1-etm-08-06-1695" ref-type="bibr">1</xref>).</p>
<p>Six transmembrane epithelial antigen of the prostate (STEAP) (<xref rid="b2-etm-08-06-1695" ref-type="bibr">2</xref>) belongs to the six transmembrane protein of prostate (STAMP) gene family, and is the first characterized transmembrane gene that is enriched in the prostate. STEAP is expressed in metastatic prostate cancer samples; in particular, STAMP1/STEAP2 (<xref rid="b3-etm-08-06-1695" ref-type="bibr">3</xref>) and STAMP2/STEAP4 (<xref rid="b4-etm-08-06-1695" ref-type="bibr">4</xref>) are expressed in the androgen receptor-positive prostate cancer cell line LNCaP, and androgen receptor-mediated regulation of STAMP2 has previously been demonstrated (<xref rid="b4-etm-08-06-1695" ref-type="bibr">4</xref>). The role of STAMP2 in metabolic disease and its function in the prevention of excessive inflammation and protection of adipocyte insulin sensitivity and systemic glucose homeostasis has been reported in mice (<xref rid="b5-etm-08-06-1695" ref-type="bibr">5</xref>). Other members of the STAMP family include pHyde, a rat protein that has been implicated in the apoptosis of prostate cancer cells (<xref rid="b6-etm-08-06-1695" ref-type="bibr">6</xref>), and its human homolog, tumor suppressor-activated pathway 6 (TSAP6), also known as STEAP3, a p53-inducible gene, involved in apoptosis and the cell cycle in prostate cancer and HeLa cells (<xref rid="b7-etm-08-06-1695" ref-type="bibr">7</xref>).</p>
<p>It is hypothesized that STAMP/STEAP family genes may have similar functions, with roles in the normal biology and pathophysiology of prostate cancer. Activation of extracellular signal-regulated kinase (ERK), which has previously been implicated in prostate cancer progression, was reported with ectopic expression of STAMP1 in DU145 cells and, conversely, was strongly downregulated in LNCaP cells following STAMP1 knockdown (<xref rid="b8-etm-08-06-1695" ref-type="bibr">8</xref>). The promoter regions of STAMP genes have been analyzed, and tumor suppressor gene p53 response elements and nuclear factor &#x003BA;B (NF&#x003BA;B) response elements identified and confirmed in the promoter region of STAMP genes (Gonen-Korkmaz <italic>et al</italic>, unpublished data). In the present study, tumor necrosis factor &#x003B1; (TNF&#x003B1;)-induced apoptosis in the LNCaP (human prostate adenocarcinoma lymph node metastasis) cell line was investigated by amplifications conducted using a panel of apoptosis-related gene primers. The LNCaP cell line expresses STAMP1 and STAMP2. Another prostate cancer cell line, DU145, which is derived from brain metastasis, was transfected with STAMP1 and STAMP2 and then induced by TNF&#x003B1;. The apoptosis/survival equilibrium, which is determined by NF&#x003BA;B, was investigated by western blot analysis of the two cell lines.</p></sec>
<sec sec-type="materials|methods">
<title>Materials and methods</title>
<sec>
<title>Cell culture</title>
<p>LNCaP cells were cultured in RPMI-1640 (Gibco-BRL, Gaithersburg, MD, USA) with 10&#x00025; fetal bovine serum (FBS), while DU145 cells were cultured in Dulbecco&#x02019;s modified Eagle&#x02019;s medium (DMEM)-Ham&#x02019;s F12 (Gibco-BRL) with 5&#x00025; FBS, 1&#x00025; L-glutamine and 1 U/ml each of penicillin/streptomycin. Cells were incubated at 37&#x000B0;C with 5&#x00025; CO<sub>2</sub> in a humidified atmosphere. The cell lines were purchased from ATCC (Manassas, VA, USA).</p></sec>
<sec>
<title>Primer design, plasmid construction and transfection</title>
<p>The full-length open reading frames of STAMP1 and STAMP2 were amplified using primers (10 pmol of each), designed using Light Cycler Probe Design Software 2 (Roche Diagnostics, Mannheim, Germany). The PCR product was cloned into pcDNA4-HisMax-TOPO (Invitrogen Life Technologies, Carlsbad, CA, USA) vector, in accordance with the manufacturer&#x02019;s instructions. The inserts were verified by PCR amplifications. All transfections including small interfering RNA (siRNA) were performed using FuGENE HD (Roche Diagnostics) transfection reagent, in accordance with the manufacturer&#x02019;s instructions. Briefly, cells were seeded in 6-well plates one day prior to transfection. The following day, the transfection solution was prepared in a 1.5-ml tube with 100 &#x003BC;l pre-warmed RPMI-1640 (without antibiotics), 1 &#x003BC;g pcDNA4-HisMax-gene plasmid DNA was added and the solution was incubated for 5 min. A total of 3 &#x003BC;l FuGENE HD transfection reagent was added dropwise with tapping to mix, and, following a 15-min incubation at room temperature, the transfection mix was added to the cells dropwise.</p></sec>
<sec>
<title>siRNA-mediated knockdown of NF&#x003BA;B</title>
<p>LNCaP cells were transfected with either scrambled control siRNA (sc-37007) or NF&#x003BA;B-specific siRNA (sc-29410), purchased from Santa Cruz Biotechnology Inc. (Dallas, TX, USA). The sequences were provided by the manufacturer.</p>
<p>A total of 100 pmol siRNA (final concentration, 50 nM) was used to transfect cells with the aid of 10 &#x003BC;l FuGENE HD transfection reagent and the cells were incubated with the siRNA construct for 1 and 4 days, respectively, in accordance with the manufacturer&#x02019;s instructions.</p></sec>
<sec>
<title>Treatment of the cells</title>
<p>The LNCaP cells were divided into four groups. The control group was cultured in the absence of treatment for 24 h; the TNF&#x003B1; induction group was induced by TNF&#x003B1; (100 ng/ml; Sigma, St. Louis, MO, USA) for 24 h. the R1881 group was treated for 24 h with a synthetic androgen, R1881 (1&#x000D7;10<sup>&#x02212;8</sup> M; Sigma); and the TNF + R1881 group was treated concomitantly with TNF&#x003B1; (100 ng/ml) and R1881 (1&#x000D7;10<sup>&#x02212;8</sup> M) for 24 h.</p>
<p>DU145 cells transfected with STAMP1 or STAMP2 were induced by TNF&#x003B1; (100 ng/ml) or were not induced for 24 h.</p>
<p>In another series of experiments, following NF&#x003BA;B gene silencing, the LNCaP cells transfected for 1 day were induced by TNF&#x003B1; (100 ng/ml) or were not induced for a further 24 h. The cells transfected for 4 days were induced by TNF&#x003B1; (100 ng/ml) or were not induced at the third day of transfection.</p></sec>
<sec>
<title>Reverse transcription quantitative polymerase chain reaction (RT-qPCR) using a panel of apoptosis-related gene primers</title>
<p>qPCR was performed using a Light Cycler<sup>&#x000AE;</sup> 480 (Roche Diagnostics) instrument and Light Cycler 480 SYBR Green 1 Master kit (Roche Diagnostics). Briefly, the reactions were performed in a 20-&#x003BC;l volume with 5 pmol of each primer and 1 &#x003BC;l of cDNA template derived from reverse-transcribed RNA of scrambled siRNA (control) and NF&#x003BA;B siRNA-transfected cells. The primers used are shown in <xref rid="tI-etm-08-06-1695" ref-type="table">Table I</xref>. GAPDH, a human housekeeping gene, was used as an endogenous control and reference gene for relative quantifications. The same thermal profile was optimized for all primers: pre-incubation for 5 min at 95&#x000B0;C for 1 cycle, followed by 40 cycles of denaturation at 95&#x000B0;C for 10 sec, primer annealing at 64&#x000B0;C for 20 sec, and primer extension at 72&#x000B0;C for 10 sec. Water was included as a no-template control. Melting curves were derived after 40 cycles by a denaturation step at 95&#x000B0;C for 10 sec, followed by annealing at 65&#x000B0;C for 15 sec, and a temperature rise to 95&#x000B0;C with a heating rate of 0.1&#x000B0;C/sec and continuous fluorescence measurement. Final cooling was performed at 37&#x000B0;C for 30 sec. Melting curve analyses of each sample were performed using LightCycler 480 Software version LCS480 (Roche Diagnostics). The analysis step of relative quantification was a fully automated process accomplished by the software, with the efficiency set at 2 and the cDNA of untreated cells defined as the calibrator.</p></sec>
<sec>
<title>Cell lysis, protein extraction and western blot analysis</title>
<p>For protein extraction, cells were grown on 60-mm culture dishes (Orange Scientific, Braine-l&#x02019;Alleud, Belgium) and washed once with phosphate-buffered saline (PBS) prior to cell lysis. Cells were resuspended in 250 &#x003BC;l modified radioimmunoprecipitation assay (RIPA) lysis buffer (10 mM Tris Cl, pH 8.0; 1&#x00025; Triton X-100; 0.1&#x00025; SDS; 0.1&#x00025; Na deoxycholate; 1 mM EDTA; 1 mM EGTA; 140 mM NaCl) containing protease and phosphatase inhibitors. Cells were collected from culture plates using a cell scraper and were transferred to Eppendorf tubes. Cells were incubated on ice for 1 h (with pipetting up/down every 10 min), centrifuged at 14,000 &#x000D7; g for 30 min and the cleared supernatants were then collected. The protein concentration was determined using the Qubit Protein assay kit (Invitrogen Life Technologies) where appropriate. SDS-PAGE and western blot analysis was performed under standard conditions using 20 &#x003BC;g lysate per lane. Proteins were separated on a 10&#x00025; gel and transferred to a polyvinylidene difluoride (PVDF) membrane (Amersham Pharmacia Biotech, Amersham, UK) using a semi-dry transfer blotter (VWR International Ltd., Lutterworth, UK). The PVDF membrane was blocked with 10&#x00025; dry milk in PBS solution containing 0.1&#x00025; Tween 20 (PBS-T) for 10 min. Primary and secondary antibody incubations were performed using PBS-T containing 0.5&#x00025; dry milk at 4&#x000B0;C overnight. Membranes were developed using enhanced chemiluminescence (ECL) plus reagent (Amersham Pharmacia Biotech) for 5 min, and images were captured using a FX7 dark room chemiluminescence camera (Vilber Lourmat, Marne-la-Vall&#x000E9;e, France). The antibodies used were mouse anti-human NF&#x003BA;B (p50/p105) monoclonal antibody (sc-166588; Santa Cruz Biotechnology) used at a dilution of 1:1,000 and mouse anti-human &#x003B2;-actin monoclonal antibody (A5316; Sigma) used at a dilution of 1:20,000. The secondary antibody was mouse anti-rabbit IgG-HRP polyclonal antibody (sc-2357; Santa Cruz Biotechnology) used at a dilution of 1:10,000.</p></sec>
<sec>
<title>Statistical analysis</title>
<p>All results represent one of at least three independent experiments with similar outcomes. All data are expressed as the mean &#x000B1; standard error of mean. One-way analysis of variance (ANOVA) and Tukey post hoc test were used to compare groups of data. P&#x02264;0.05 was considered to indicate a statistically significant result. GraphPad Software, Version 4.03 (San Diego, CA, USA) was used for the statistical analysis.</p></sec></sec>
<sec sec-type="results">
<title>Results</title>
<sec>
<title>Effects of TNF&#x003B1; induction with or without R1881 treatment on the expression of p50 and p105 in LNCaP cells</title>
<p>LNCaP cells were treated with TNF&#x003B1; in the presence or absence of R1881, which is a synthetic androgen analog. TNF&#x003B1; induction, R1881 treatment and TNF&#x003B1; induction plus R1881 treatment led to reductions in p105 expression levels. Treatment with TNF&#x003B1; alone caused a slight reduction in the p50 expression level, whereas R1881 treatment increased the protein expression level of p50 in the presence or absence of TNF&#x003B1; (<xref rid="f1-etm-08-06-1695" ref-type="fig">Fig. 1</xref>).</p></sec>
<sec>
<title>Effects of STAMP1 and STAMP2 transfections with or without TNF&#x003B1; induction on the expression of p50 in DU145 cells</title>
<p>DU145 cells were transfected with HisMax-vector, HisMax-STAMP1 or HisMax-STAMP2. The transfected cells were then either induced by TNF&#x003B1; or were not induced. HisMAX-STAMP1 transfection decreased the expression level of p50. However, TNF&#x003B1; induction following HisMAX-STAMP1 transfection led to an increase in the expression level of p50. By contrast, HisMAX-STAMP2 transfection increased the expression level of p50, and TNF&#x003B1; induction had no effect on the expression level of p50 in cells transfected with HisMAX-STAMP2 (<xref rid="f2-etm-08-06-1695" ref-type="fig">Fig. 2</xref>).</p></sec>
<sec>
<title>Effects of TNF&#x003B1; induction on apoptosis-related gene expression in LNCaP cells</title>
<p>RT-qPCR amplifications were performed with a panel of apoptosis-related primers following the induction of LNCaP cells with TNF&#x003B1;. Induction with TNF&#x003B1; led to increases in the mRNA levels of the apoptosis-related genes p53, p73, caspase 7 and caspase 9, and the survival-related gene AKT1. Conversely, TNF&#x003B1; induction tended to decrease the mRNA levels of MDM2 and STAMP1; however, the reductions were not significant. The mRNA levels of STAMP2 were unaffected by TNF&#x003B1; induction (<xref rid="f3-etm-08-06-1695" ref-type="fig">Fig. 3</xref>).</p></sec>
<sec>
<title>Effect of NF&#x003BA;B gene silencing with or without TNF&#x003B1; induction on apoptosis-related gene expression in LNCaP cells</title>
<p>Cells were transfected with siNF&#x003BA;B construct or scrambled control for 1 or 4 days. The cells transfected for 1 day were induced by TNF&#x003B1; or were not induced for a further 24 h in serum medium. The cells transfected for 4 days were induced by TNF&#x003B1; or not induced for 24 h at the third day of transfection.</p>
<p>TNF&#x003B1; induction increased the mRNA levels of p53, p73, AKT1 and caspases 7 and 9, and also tended to decrease the mRNA levels of MDM2 and STAMP1 in the LNCaP cells transfected with scrambled control (<xref rid="f4-etm-08-06-1695" ref-type="fig">Figs. 4</xref> and <xref rid="f5-etm-08-06-1695" ref-type="fig">5</xref>).</p>
<p>Silencing of the NF&#x003BA;B gene decreased the mRNA levels of p53 (<xref rid="f5-etm-08-06-1695" ref-type="fig">Fig. 5</xref>). NF&#x003BA;B gene silencing also attenuated the effect of TNF&#x003B1; induction on the mRNA levels of p53 at day 1 (<xref rid="f4-etm-08-06-1695" ref-type="fig">Fig. 4</xref>). Silencing of the NF&#x003BA;B gene inhibited the effect of TNF&#x003B1; induction on the mRNA levels of p53 at day 4 (<xref rid="f5-etm-08-06-1695" ref-type="fig">Fig 5</xref>).</p>
<p>The effects of NF&#x003BA;B gene silencing on p73 were similar to those on p53. Specifically, NF&#x003BA;B gene silencing decreased the mRNA levels of p73 and these results showed a statistically significant difference between the scrambled control and NF&#x003BA;B gene-silenced groups on day 4 (<xref rid="f5-etm-08-06-1695" ref-type="fig">Fig. 5</xref>). In addition, NF&#x003BA;B gene silencing inhibited the effect of NF&#x003BA;B induction on the mRNA levels of p73 (<xref rid="f4-etm-08-06-1695" ref-type="fig">Figs. 4</xref> and <xref rid="f5-etm-08-06-1695" ref-type="fig">5</xref>).</p>
<p>Notably, silencing the NF&#x003BA;B gene decreased the mRNA levels of AKT1, which is known to be a survival gene, at day 4. In addition, it inhibited the effect of TNF&#x003B1; induction on the mRNA levels of AKT1 (<xref rid="f4-etm-08-06-1695" ref-type="fig">Figs. 4</xref> and <xref rid="f5-etm-08-06-1695" ref-type="fig">5</xref>).</p>
<p>Comparison of the MDM2 mRNA levels between the scrambled control and NF&#x003BA;B gene-silenced groups showed that silencing the NF&#x003BA;B gene increased the mRNA levels of MDM2 at both transfection times (<xref rid="f4-etm-08-06-1695" ref-type="fig">Figs. 4</xref> and <xref rid="f5-etm-08-06-1695" ref-type="fig">5</xref>). Silencing the NF&#x003BA;B gene inhibited the effect of TNF&#x003B1; on the mRNA levels of MDM2 on days 1 and 4 (<xref rid="f4-etm-08-06-1695" ref-type="fig">Figs. 4</xref> and <xref rid="f5-etm-08-06-1695" ref-type="fig">5</xref>).</p>
<p>The effects of NF&#x003BA;B gene silencing in the presence or absence of NF&#x003BA;B induction on caspase 7 and 9 were also investigated. Silencing the NF&#x003BA;B gene tended to decrease the mRNA levels of caspase 7 and 9, although the reductions were not statistically significant (<xref rid="f4-etm-08-06-1695" ref-type="fig">Figs. 4</xref> and <xref rid="f5-etm-08-06-1695" ref-type="fig">5</xref>). NF&#x003BA;B silencing decreased the mRNA levels of caspase 7 and 9 in the TNF&#x003B1;-induced cells (<xref rid="f4-etm-08-06-1695" ref-type="fig">Figs. 4</xref> and <xref rid="f5-etm-08-06-1695" ref-type="fig">5</xref>).</p>
<p>NF&#x003BA;B gene silencing increased the mRNA levels of STAMP1 at day 4, and reversed the inhibitory effect of TNF&#x003B1; induction on the mRNA levels of STAMP1 at day 4 (<xref rid="f5-etm-08-06-1695" ref-type="fig">Fig. 5</xref>).</p>
<p>Neither silencing the NF&#x003BA;B gene nor TNF&#x003B1; induction had any effect on the mRNA levels of STAMP2 (<xref rid="f4-etm-08-06-1695" ref-type="fig">Figs. 4</xref> and <xref rid="f5-etm-08-06-1695" ref-type="fig">5</xref>).</p></sec></sec>
<sec sec-type="discussion">
<title>Discussion</title>
<p>Since, inflammation and cancer are closely related disorders (<xref rid="b9-etm-08-06-1695" ref-type="bibr">9</xref>), NF&#x003BA;B is a topic of particular interest to researchers (<xref rid="b10-etm-08-06-1695" ref-type="bibr">10</xref>). The activation of NF&#x003BA;B is generally achieved by chronic exposure to TNF&#x003B1; (<xref rid="b11-etm-08-06-1695" ref-type="bibr">11</xref>). The activation results in the altered expression of various genes (<xref rid="b12-etm-08-06-1695" ref-type="bibr">12</xref>), and also the constant expression of TNF receptors R1 and R2 (data not shown). Altered gene expression has been reported in the following cell lines: DU145, which has constitutive NF&#x003BA;B expression, and LNCaP, which has TNF-inducible NF&#x003BA;B expression (<xref rid="b13-etm-08-06-1695" ref-type="bibr">13</xref>). NF&#x003BA;B is a heterodimeric or homodimeric complex formed from five different subunits that are known as: RelA (p65), Rel B, c-Rel, NF&#x003BA;B1 (p50) and NF&#x003BA;B2 (p52). p50 and p52 subunits are derivatives of large precursor units p105 and p100, respectively. The classical NF&#x003BA;B heterodimer consists of p65 and p50 (<xref rid="b14-etm-08-06-1695" ref-type="bibr">14</xref>). In the present study we focused on p105 and one of its subunit, p50 (NF&#x003BA;B1). TNF&#x003B1; induction decreased p105 and p50 expression. This result is consistent with previous studies. The LNCaP cell line has androgen receptor expression and is therefore responsive to R1881, an androgen analog. R1881 treatment decreased p105 expression, whereas it increased p50 expression. The DU145 cell line does not have an androgen receptor and ST1 transfection decreased p50 expression. However, TNF&#x003B1; diminished the effect of STAMP1 transfection and STAMP2 transfection increased p50 expression. Furthermore, TNF&#x003B1; induction has no additional effect on p50 in ST2 transfected cells. These results may indicate that further studies may reveal the correlation between androgen stimulation and the survival gene NF&#x003BA;B in prostate cancer. Additionally, STAMP1 and STAMP2 genes may have different and opposite roles on NF&#x003BA;B signaling.</p>
<p>In order to investigate the potential interactions, RT-qPCR amplifications using a panel of primers specific for intrinsic apoptosis were conducted in the present study. Following induction with TNF&#x003B1;, the mRNA levels of p53, which is a tumor suppressor (<xref rid="b15-etm-08-06-1695" ref-type="bibr">15</xref>), and p73, which is both a suppressor and supporter of cell growth (<xref rid="b16-etm-08-06-1695" ref-type="bibr">16</xref>), were found to increase. TNF&#x003B1; induction also increased mRNA levels of AKT1, a survival gene. Expression level changes of AKT1 have been previously revealed in prostate cancer cell lines (<xref rid="b17-etm-08-06-1695" ref-type="bibr">17</xref>). By contrast, the mRNA levels of MDM2, a ubiquitin ligase for p53 (<xref rid="b18-etm-08-06-1695" ref-type="bibr">18</xref>) and of STAMP1, identified as a p53 negative regulator (unpublished data), were reduced. Caspases 7 and 9 each have distinct roles during intrinsic apoptosis (<xref rid="b19-etm-08-06-1695" ref-type="bibr">19</xref>,<xref rid="b20-etm-08-06-1695" ref-type="bibr">20</xref>), and it was observed in the present study that the mRNA levels of caspase 7 and 9 were increased by treatment with TNF&#x003B1;. Silencing of NF&#x003BA;B almost completely inhibited the effects of TNF&#x003B1; induction on the expression of apoptosis related genes. This result implied that NF&#x003BA;B may play an important role on the regulation of apoptosis-related genes in prostate cancer. The activation of NF&#x003BA;B may cause chemoresistance in chemotherapy regimens (<xref rid="b21-etm-08-06-1695" ref-type="bibr">21</xref>); therefore, alternative reagents for inhibiting NF&#x003BA;B have been investigated (<xref rid="b22-etm-08-06-1695" ref-type="bibr">22</xref>,<xref rid="b23-etm-08-06-1695" ref-type="bibr">23</xref>). Besides, the mRNA expression of STAMP1 was also decreased by TNF&#x003B1; induction. To the best of our knowledge, the present study is the first to reveal effect of TNF&#x003B1; induction on STAMP1. Interestingly, NF&#x003BA;B gene silencing increased STAMP1 expression. Regulation of STAMP1 gene expression may be related to the NF&#x003BA;B pathway. Conversely, STAMP2 amplification was not changed by either TNF&#x003B1; induction or NF&#x003BA;B silencing.</p>
<p>The androgen receptor (AR) is a member of the steroid receptor superfamily and a transcription factor. The response elements of prostate specific antigen (PSA) and NF&#x003BA;B are located at the AR promoter region (<xref rid="b24-etm-08-06-1695" ref-type="bibr">24</xref>), and suggest that NF&#x003BA;B may effect AR expression. The activation of AKT and NF&#x003BA;B is reported to be involved in the progression of prostate cancer from androgen dependence to independence (<xref rid="b25-etm-08-06-1695" ref-type="bibr">25</xref>,<xref rid="b26-etm-08-06-1695" ref-type="bibr">26</xref>). These findings, in combination with previous observations (<xref rid="b27-etm-08-06-1695" ref-type="bibr">27</xref>) indicate that the effective inhibition of NF&#x003BA;B may be critical in providing a targeted pathway for the prevention of prostate cancer.</p></sec></body>
<back>
<ack>
<title>Acknowledgements</title>
<p>This study was supported by grants from The Scientific and Technological Research Council of Turkey (TUBITAK) to CGK (Grant no: 106S295) and The Turkish Academy of Sciences (TUBA) to CGK (GEBIP-2007).</p></ack>
<glossary>
<title>Abbreviations</title>
<def-list>
<def-item>
<term id="G1">MDM2</term>
<def>
<p>E3 ubiquitin ligase</p></def></def-item>
<def-item>
<term id="G2">TNF</term>
<def>
<p>tumor necrosis factor</p></def></def-item>
<def-item>
<term id="G3">NF&#x003BA;B</term>
<def>
<p>nuclear factor &#x003BA;B</p></def></def-item>
<def-item>
<term id="G4">STEAP</term>
<def>
<p>six transmembrane epithelial antigen of prostate</p></def></def-item>
<def-item>
<term id="G5">STAMP</term>
<def>
<p>six transmembrane protein of prostate</p></def></def-item></def-list></glossary>
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<floats-group>
<fig id="f1-etm-08-06-1695" position="float">
<label>Figure 1</label>
<caption>
<p>Protein expression of p50 and p105 in LNCaP cells as revealed by western blotting. LNCaP cells were induced with TNF&#x003B1; in the presence or absence of synthetic androgen R1881.</p></caption>
<graphic xlink:href="ETM-08-06-1695-g00.gif"/></fig>
<fig id="f2-etm-08-06-1695" position="float">
<label>Figure 2</label>
<caption>
<p>Protein expression of p50 in DU145 cells as revealed by western blotting. DU145 cells were transfected with HisMax-vector (V), HisMax-STAMP1 (ST1) or HisMax-STAMP2 (ST2). Transfected cells were induced by TNF&#x003B1; or not induced.</p></caption>
<graphic xlink:href="ETM-08-06-1695-g01.gif"/></fig>
<fig id="f3-etm-08-06-1695" position="float">
<label>Figure 3</label>
<caption>
<p>Effects of TNF&#x003B1; induction on the mRNA expression of apoptosis-related genes in LNCaP cells. <sup>***</sup>P&#x02264;0.001 vs. control, compared by one-way analysis of variance followed by Tukey post hoc test.</p></caption>
<graphic xlink:href="ETM-08-06-1695-g02.gif"/></fig>
<fig id="f4-etm-08-06-1695" position="float">
<label>Figure 4</label>
<caption>
<p>Effect of NF&#x003BA;B gene silencing (day 1) with or without TNF&#x003B1; induction on the expression of apoptosis-related genes in LNCaP cells: Cells were transfected with siNF&#x003BA;B construct or scrambled control for 1 day. Transfected cells were induced by TNF&#x003B1; or were not induced for a further 24 h in serum medium. <sup>*</sup>P&#x02264;0.05, <sup>***</sup>P&#x02264;0.001 vs. control, compared by one-way analysis of variance followed by Tukey post hoc test.</p></caption>
<graphic xlink:href="ETM-08-06-1695-g03.gif"/></fig>
<fig id="f5-etm-08-06-1695" position="float">
<label>Figure 5</label>
<caption>
<p>Effect of NF&#x003BA;B gene silencing (day 4) with or without TNF&#x003B1; induction on the expression of apoptosis-related genes in LNCaP cells: Cells were transfected with siNF&#x003BA;B construct or scrambled control for 4 days. Transfected cells were induced by TNF&#x003B1; or were not induced on day 3. <sup>*</sup>P&#x02264;0.05, <sup>**</sup>P&#x02264;0.01, <sup>***</sup>P&#x02264;0.001, compared by one-way analysis of variance followed by Tukey post hoc test.</p></caption>
<graphic xlink:href="ETM-08-06-1695-g04.gif"/></fig>
<table-wrap id="tI-etm-08-06-1695" position="float">
<label>Table I</label>
<caption>
<p>Genes and primers used as an apoptosis panel for quantitative polymerase chain reaction (qPCR) analysis.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th valign="bottom" align="left">GenBank/Symbol</th>
<th valign="bottom" align="center">Description</th>
<th valign="bottom" align="center">Gene name</th>
<th valign="bottom" align="center">Primer sequence</th></tr></thead>
<tbody>
<tr>
<td valign="top" align="left">NM_005163/AKT1</td>
<td valign="top" align="left">V-akt murine thymoma viral oncogene homolog 1</td>
<td valign="top" align="left">PKB/PRKBA</td>
<td valign="top" align="left">Forward: TCCCCCTCAGATGATCTCTCCA<break/>Reverse: CGGAAAGGTTAAGCGTCGAAAA</td></tr>
<tr>
<td valign="top" align="left">NM_001227/CASP7</td>
<td valign="top" align="left">Caspase 7, apoptosis- related cysteine peptidase</td>
<td valign="top" align="left">CMH-1/ICE-LAP3</td>
<td valign="top" align="left">Forward: AAGTGAGGAAGAGTTTATGGCAAA<break/>Reverse: CCATCTTGAAAACAAAGTGCCAAA</td></tr>
<tr>
<td valign="top" align="left">NM_001229/CASP9</td>
<td valign="top" align="left">Caspase 9, apoptosis- related cysteine peptidase</td>
<td valign="top" align="left">APAF-3/APAF3</td>
<td valign="top" align="left">Forward: TCCTGAGTGGTGCCAAACAAAA<break/>Reverse: AGTGGTTGTCAGGCGAGGAAAG</td></tr>
<tr>
<td valign="top" align="left">NM_005427/TP73</td>
<td valign="top" align="left">Tumor protein p73</td>
<td valign="top" align="left">P73</td>
<td valign="top" align="left">Forward: AGCAGCCCATCAAGGAGGAGTT<break/>Reverse: TCCTGAGGCAGTTTTGGACACA</td></tr>
<tr>
<td valign="top" align="left">NM_000546/TP53</td>
<td valign="top" align="left">Tumor protein p53 (Li-Fraumeni syndrome)</td>
<td valign="top" align="left">CYS51STOP/P53</td>
<td valign="top" align="left">Forward: AGATGGGGTCTCACAGTGTTGC<break/>Reverse: ATGTTGACCCTTCCAGCTCCAC</td></tr>
<tr>
<td valign="top" align="left">NM_002392/MDM2</td>
<td valign="top" align="left">MDM2 proto-oncogene, E3 ubiquitin ligase</td>
<td valign="top" align="left">HDMX/MGC71221</td>
<td valign="top" align="left">Forward: GGGTTCGCACCATTCTCCTG<break/>Reverse: GGCAGATGACTGTAGGCCAAGC</td></tr>
<tr>
<td valign="top" align="left">NM_152999.3/STAMP1</td>
<td valign="top" align="left">STEAP family member 2, metalloreductase (STEAP2), transcript variant 1</td>
<td valign="top" align="left">STEAP2/STAMP1</td>
<td valign="top" align="left">Forward: ATAGGAAGTGGGGATTTTGC<break/>Reverse: AGATGTCTCAGGTCCCACAA</td></tr>
<tr>
<td valign="top" align="left">NM_024636.3/STAMP2</td>
<td valign="top" align="left">STEAP family member 4 (STEAP4), transcript variant 1</td>
<td valign="top" align="left">STEAP4/STAMP2</td>
<td valign="top" align="left">Forward: GCACTTACACTGCTTGC<break/>Reverse: CAGTGGTCAAGCCAGTC</td></tr>
<tr>
<td valign="top" align="left">NM_002046/GAPDH</td>
<td valign="top" align="left">Glyceraldehyde-3-phosphate dehydrogenase</td>
<td valign="top" align="left">G3PD, GAPD</td>
<td valign="top" align="left">Forward: CATTGCCCTCAACGACCACTTT<break/>Reverse: GGTGGTCCAGGGGTCTTACTCC</td></tr></tbody></table>
<table-wrap-foot><fn id="tfn1-etm-08-06-1695">
<p>GenBank accession numbers for reference mRNA sequences, gene names and and descriptions are as provided by the RefSeq database of the National Center for Biotechnology Information.</p></fn></table-wrap-foot></table-wrap></floats-group></article>
