Association between mutations in the gap junction β4 gene and nonsyndromic hearing loss: Genotype‑phenotype correlation patterns

  • Authors:
    • Tung‑Cheng Li
    • Wen‑Hung Wang
    • Chuan Li
    • Jiann‑Jou Yang
  • View Affiliations

  • Published online on: October 21, 2014     https://doi.org/10.3892/mmr.2014.2725
  • Pages: 619-624
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Abstract

Numerous studies have confirmed that gap junctions, composed of connexin (Cx) protein, are essential for auditory function. However, few studies have investigated the correlation between variants in the gap junction β4 (GJB4) gene and phenotype in patients with nonsyndromic hearing loss. Our previous study identified 11 patients with GJB4 gene variants in 253 unrelated patients with nonsyndromic hearing loss. In the present study, the phenotype‑genotype correlation was examined in the 11 deaf patients with the different variants of GJB4. Analytical results revealed that the majority of probands had congenital hearing loss, which was bilateral, stable and without associated dermatological manifestations or morphological changes of the inner ear. An audiometric profile, including the observed consistency with severe‑profound and flat shape dominance, may enable screening for variants of GJB4. On the basis of the above results, it was hypothesized that GJB4 may be a genetic risk factor for the development of nonsyndromic hearing loss and the data from the present study can be used to direct the clinical evaluation and effectively manage the care of families of children with GJB4.

Introduction

Hearing impairment is the most common sensory disorder worldwide (1) and genetic inheritance presents a major source of the auditory system dysfunction resulting in hearing loss (2). Presently, 54 gene loci associated with an autosomal dominant mode of inheritance and 67 gene loci associated with an autosomal recessive mode of inheritance have been identified, of which seven are X chromosome-linked and four are mitochondrial (3). The cochlea is a complex organ in the ear, which is composed of several cell types and specialized regions that are involved in the normal process of hearing. A number of genes have been associated with hearing loss and several corresponding proteins have been identified as being expressed in the cochlea. Ionic homeostasis in the cochlear duct is associated with a several genes associated with deafness (4). In mice, endolymph (the fluid surrounding the upper surface of the hair cell) has a high concentration of potassium and a low concentration of sodium, and is maintained at a high positive resting potential of approximately +100 mV. This high resting potential is considered to be essential for the normal functioning of hair cells as, when its value is reduced to zero, deafness occurs (5).

Communication between the majority of cells in animal tissues is mediated by unique intercellular cytoplasmic channels, gap junctions, spanning across two cell membranes. These cell-to-cell channels consist of assemblies of proteins termed connexins (Cxs) or pannexins in vertebrates and innexins in invertebrates (6). Cxs belong to a protein family of >20 members, each of which is encoded by a different gene and they are assigned a number which is associated with their approximate molecular weights. Cxs share a common structure of four transmembrane segments, which extend into two extracellular and three cytoplasmic domains (7). Gap junction intercellular communication has a range of functions in order to meet the requirements of the organs, tissues and cell groups in which the Cx genes are expressed (8), and the importance of these gap junctions in auditory functions has been confirmed by numerous studies (913). In the sensory epithelia of the inner ear, gap junction channels are important in the recycling of potassium ions that enter the hair cells and are also involved in auditory signal transduction (14).

Immunolabeling analysis has identified several types of Cx product, including Cx26, Cx29, Cx30, Cx31 and Cx43, in the mature cochlea (1012,1517). Through immunohistochemiical and reverse transcription-quantitative polymerase chain reaction analyses, our previous study indicated that Cx30.3 is present and localized in the rat cochlea (18). In addition, a study of 555 deaf patients revealed a common (4.1%; 23/555) frameshift mutation (c.154del4) in gap junction β4 (GJB4, also termed Cx30.3) in deaf individuals (18). In the study, five amino acid variants (c.307 C>T, c.371 G>A, c.478 C>T, c.507 C>G and c.611 A>C) were detected in deaf individuals without skin disorders (19). In our previous genetic survey of 373 individuals, including 253 with nonsyndromic deafness and 120 with normal hearing, 11 mutations were detected in the patients with hearing loss (20). However, the correlation between the GJB4 gene mutations and the audiology phenotype in deaf patients was not examined. Therefore, the present study investigated the phenotype-genotype correlation in deaf patients with mutations in GJB4, the results of which may provide assistance in the clinical evaluation and effective management of care for families of children with GJB4.

Materials and methods

Patient selection

A total of 253 individuals with hearing loss were screened for GJB4 variants in the present study. For the patients with hearing loss, a total of 173 school children were selected from the National Tainan School for the Deaf (Tainan, China) and 80 individuals with hearing loss, who were managed at the Chang Gung Memorial Hospital (Chiayi, China), were selected. The frequency range of hearing loss was between 250 and 8,000 Hz, with a mean threshold (500, 1,000, 2,000 and 4,000 Hz) of >40 dB in the right and left ears. All probands were 17 years old or younger at the time of molecular diagnosis. In the present study, the 11 patients with GJB4 missense and nonsense mutations had complete audiograms and were used for analysis.

Patients with syndromic hearing loss or environment-associated hearing loss were excluded from the present study, as determined by an otorhinolaryngologist. The complete medical history of each child was obtained to determine the age of onset of deafness and to exclude the possibility of environmental causes, including maternofetal infection, perinatal complications, meningitis, mumps, prenatal or postnatal drug ototoxicity and acoustic trauma. All procedures were approved by the Institutional Review Board of Chung Gung Memorial Hospital (96-1294B). Written informed consent was obtained from all patients.

Clinical evaluation

The genetic and audiological data were categorized according to recommendations on geneotype-phenotype correlations by the Genetic Deafness Study Group (21). According to these guidelines, the groups were recognized as follows: Mild hearing loss (20–40 dB), moderate hearing loss (41–70 dB), severe hearing loss (71–95 dB) and profound hearing loss (>95 dB). The audiometric configurations were determined for each ear by differences in hearing level (HL) as follows: Ascending low frequency, >15 dB difference in HL between the poorer low frequency thresholds and the higher frequencies; U-shaped mid frequency, >15 dB difference in HL between thresholds at the poorest mid-frequencies and those at higher and lower frequencies; gently sloping high frequency, 5–29 dB difference in HL between the mean thresholds at 0.5 and 1 kHz and at 4 and 8 kHz; steeply sloping high frequency, >30 dB difference in HL between the above-mentioned frequencies; and flat, <15 dB difference in HL between the mean thresholds at 0.25 and 0.5 kHz, 1 and 2 kHz and 4 and 8 kHz. Asymmetric HL was defined as an interaural pure tone average (PTA) difference of >10 dB in at least two frequencies.

Computed tomography (CT) of the inner ear

CT images of the inner ears were examined in 11 probands in the cohort of the present study. All the images examined were high resolution 1-mm contiguous, axial and coronal images of the temporal bones. Digital or printed images were evaluated for abnormalities of the cochlea, vestibule, semicircular canals and endolymphatic aqueduct.

Results

Severity and configuration of hearing impairment and genotype

In our previous study, a total of nine different GJB4 mutations were identified in 11 of the 253 probands (19). Of these mutations, eight were missense variants that led to amino acid substitution in the encoded proteins and one was a nonsense mutation. No vestibular symptoms or skin disorders were observed in any individual. Genetic assessment facilitates the determination of the cause of deafness and the prediction of the degree of hearing impairment and language development (22). Therefore, the present study investigated the phenotype-genotype correlation in the 11 deaf patients with mutations of GJB4. The severity of hearing impairment was assessed in the 11 patients with the GJB4 mutations (Table I; Fig. 1), and the four-frequency PTA was calculated as the average of air-conduction thresholds at 500, 1,000, 2,000 and 4,000 Hz. The mean (± standard deviation) threshold of hearing for all GJB4 mutations was 97.16 dB (± 13.52 dB). In the present study, 10 probands with the GJB4 mutation were observed to have symmetrical HL. Asymmetric HL was observed in only one proband (TDF547), with an interaural PTA difference of 20 dB. This proband had a c.109G>A/WT heterozygous genotype. In addition, one proband (TDF521) was identified with a compound missense heterzogous mutation (c.376G>A/c.507C>G) of GJB4 and had more severe hearing loss, compared with the proband exhibiting a heterozygous missense mutation (c.376G>A/wt), in the right and left ears (Fig. 2).

Table I

Audibility thresholds for air conduction in pure tone audiometry of the 11 patients with gap junction β4 missense and nonsense variants at frequencies between 250 and 8,000 Hz.

Table I

Audibility thresholds for air conduction in pure tone audiometry of the 11 patients with gap junction β4 missense and nonsense variants at frequencies between 250 and 8,000 Hz.

PatientGenotype variant (amino acid change)Protein domainFrequency (Hz)Mean thresholda

Ear2505001,0002,0004,0008,000
KDF026c.64 C>T/WTM1RAR9510010090AR96.3±4.8
(pR22C)LAR10595110105AR103.8±6.3
TDF547c.109 G>A/WTM1R7090100100110100100.0±8.2
(p.V37M)L90100100100110100102.5±5.0
TDF553c.109 G> A/WTM1R95100100105115100105.0±7.1
(p.V37M)L105115120120115100117.5±2.9
TDF067c.199G >A/WTElR110110110110110110110.0±0.0
(p.E 67L)L110110110110110110110.0±0.0
CDF006c.292 C>T/WTCLR70707570757572.5±2.9
(pR.98C)L60657570707070.0±4.1
LDF011c.370 C>T/WTCLRAR95105105100AR101.3±4.8
(p.R124W)LAR9010095100AR96.3±4.8
TDF512c376G>A/WTCLR6065656580AR68.8±7.5
(p.G126T)L5560758080AR73.8±9.5
LDF014c.507 C>A/WTE2R55859510011010097.5±10.4
(p.0 169X)L55859510011010097.5±10.4
KDF012c.661 C>T/WTCRAR100100100110AR102.5±5.0
(p.H221Y)LAR90100110110AR102.5±9.6
TD F035c.698C>A/WTCR90100100110110100105.0±5.8
(p.T233L)L90110100110110100107.5±5.0
TDF521c.376G>A/c.507 C>GCL/E2R80859010511010097.5±11.9
(p.G126T)/(p.C169W)L809510010510095100.0±4.1

a Mean, calculated from the frequencies of 500, 1,000, 2,000 and 4000 Hz.

{ label (or @symbol) needed for fn[@id='tfn2-mmr-11-01-0619'] } AR, absent response in the maximum intensity of the device; R, right ear; L, left ear; E1, first extracellular loop; E2, second extracellular loop; M1, transmembrane domain 1; CL, cytoplasmic linking domain.

Cx30.3 protein structure and hearing loss

Similar to other Cx proteins, Cx30.3 consists of four transmembrane (TM) domains, TM1 (amino acid 21–40), TM2 (amino acid 76–98), TM3 (amino acid 127–149) and TM4 (amino acid 188–210). These are linked by one cytoplasmic and two extracellular loops with cytoplasmic C- and N-terminal ends. The p.R22C and p.V37M substitutions detected in the present study occurred in TM1 of Cx30.3, and the p.E67L and p.C169X substitutions occurred in the first extracellular loop (E1) and the second extracellular loop (E2) of Cx30.3, respectively. In addition, three variants, p.R98C, p.R124W and p.G126T, were located at the cytoplasmic domain and two variants, p.H221Y and p.T233L, were located at the C-terminal domain. The relative predictive values of PTA were then examined in the right and left ears of the patients with the GJB4 mutations (Table I). The hearing threshold results revealed that cytoplasmic linking (CL) domain mutations of the Cx30.3 protein had a PTA of 68–72 dB, with the exception of the p.R124W missense mutation. However, the mean PTA was >96 dB in the other domains of the Cx30.3 protein (Table I), suggesting that the degree of PTA was lower in CL domain mutations compared with mutations in others domains of the Cx30.3 protein. In addition, in the proband with the c.507C>A (p.C169X) mutation, the degree of hearing loss was more marked at high frequencies compared with low frequencies (Table I; Fig. 1).

Configuration of hearing loss

Furthermore, the relative frequencies of the configuration of hearing impairment in patients with GJB4 and GJB2 genotype variants in the present study were compared with those in previous studies by Hişmi et al (23) and Liu et al (24) (Table II; Fig. 3). The results indicated that the frequency of a flat audiometric configuration in patients with GJB4 variants was significantly higher compared with that in patients with GJB2 variants (P=0.016). Similarly, a significant difference was observed between the patients with GJB4 variants in the present study and the patients with GJB2 variants in the study by Liu et al (P<0.001). However, the difference in the frequency of this configuration between patients with GJB4 in the present study and with GJB2 in the study by Hişmi et al was small (P=0.403). This may be due to the difference in the point mutation site in the GJB2 genotype, which was c.35delG in the Hişmi et al study and c.235delC in the present study, or due to different ethnicities resulting in different phenotypes. Therefore, in the present study, the flat shape was more predominant in patients with GJB4 variants compared with GJB2 variants, and this data may be applied to direct the clinical evaluation of children with GJB2 or GJB4.

Table II

Comparison of GJB4 and GJB2 on the basis of audiogram shapes.

Table II

Comparison of GJB4 and GJB2 on the basis of audiogram shapes.

Present study GJB4Present study GJB2Hişmi et al (21) GJB2Liu et al (22) GJB2




Audiogram shapeEars (n)%Ears (n)%Ears (n)%Probands (n)%
Flat1672.712307559.54824.7
Sloping522.720505039.613670.1
U-shaped-0.041010.8105.1
Ascending14.6410-0.0-0.0
Total22100.040100126100.0194100.0

[i] GJB4/2, gap junction β4/2.

CT images of the 11 patients were also analyzed. A total of 10 probands (20 ears) exhibited normal CT images of the temporal bones. In one patient (LDF011) with a c.370 C>T heterozygous genotype, inner ear and middle ear deformities were observed (Fig. 4). The CT findings included bilateral stenosis of the inner auditory canal, which was greater on the left side, bilateral shortening of the superior and lateral semicircular canals and bilateral non-pneumatization of the mastoid air cells. In conclusion, only one of the 11 patients (9%) with the GJB4 variant in the present study had a morphological abnormality of the inner ear, as indicated on the CT images. Therefore, the number of patients with morphological abnormalities of the inner ear in the cohort was low.

Discussion

Several genetic studies have revealed the importance of Cxs in normal cochlear function (Hereditary Hearing loss Homepage; http://hereditaryhearingloss.org/). Few studies have been conducted on the correlation of variants in the GJB4 gene and its phenotype in patients with nonsyndromic hearing loss. These previous studies were compared and summarized in Table I (13,19,20). In these results, the proportion of patients with GJB4 variants was determined to be 4.09% (21/513). The present study identified that variation in GJB4 is the second most common genetic risk factor in the Cx gene family for the development of hearing loss in this population. In addition, the phenotype of patients with variants of Cx30.3 included prelingual, bilateral, severe-to-profound hearing loss. A flat audiometric configuration was also more frequently detected in patients with GJB4 (Cx30.3) variants compared with patients with GJB2 variants.

In total, >20 different Cx proteins have been identified in mammals. They all share a common structure, however, each has its own tissue distribution-specificity, electrophysiological characteristics and regulatory properties (25). Electrophysiological studies have indicated that gap junctions have multiple gating mechanisms. At least two regulation mechanisms respond to transjunctional voltage (Vj), including Vj gating (fast) and loop gating (slow) (26). In addition, membrane voltage (Vm) can also gate gap junctions, termed Vm-gating, and by chemical factors, including the phosphorylation, pH and Ca2+, which is termed chemical gating (27). Therefore, patients may exhibit different phenotypes between mutations in different functional domains of the Cx protein.

A three-dimensional (3D) characterization of protein structures can be used to explain the functions of proteins and their disease formation associations (28,29). High-resolution characterization of proteins can be provided by either experimental methods, including X-ray crystallography, nuclear magnetic resonance or computational analysis (29). However, there is a significantly higher number of known protein sequences compared with experimentally solved protein structures. Use of a method comprising reliable models of proteins, which share ≥30% sequence identity between known structures and target proteins (28,30), may assist in understanding the function of target proteins in the absence of crystallographic structures. The crystalline structure of the gap junction channel, which is formed by human Cx26, has been previously described (31,32) and the N-terminal and TM13 domains have been identified as important in the permeation pathway of a gap junction channel with an intracellular channel entrance, pore funnel and extracellular cavity (31,32). In addition, analysis of the crystalline structure revealed that the TM2, TM4, E1 and E2 domains of Cx are associated with the structural organization of the hexameric connexon, and two neighbor connexons of the gap junction channel interact with the E1 and E2 domains (31). In classifying the Cx protein, human Cx26 and Cx30.3 are referred to as the same subgroup, termed group I or the β group, in phylogenetic tree analysis (33). Therefore, the Cx26 crystalline structure may assist in explaining why, in the present study, mutants in the CL domain of Cx30.3 affected the degree of hearing loss compared with the other functional domains of Cx30.3. However, in the present study, the functional effect of Cx30.3 was a prediction and the real functional effect remains to be elucidated. Therefore, in order to further investigate the effect of these variants at the protein level, the 3D structure of the Cx30.3 protein requires investigation.

The c.507C>G (p.C169W) missense mutation has been found in patients with nonsyndromic hearing loss (13,20). The results of the present study revealed that the heterozygous c.507C>G mutation was present in the normal hearing control group. In addition, the proband containing the homozygous c.507C>G mutation was inherited from parents with normal hearing, suggesting that the c.507C>G missense mutation had a recessive inheritance pattern (13). In the present study, a patient carrying the compound heterozygous mutation, c.376G>A/c.507 C>G (p.G126T)/p.C169W), had more serious hearing loss in the right and left ears compared with a patient carrying only a heterozygous mutation (c.376G>A/wt) (Fig. 2). This result demonstrated that the combination of two genetic mutations leads to a disease phenotype, however, this phenotype is not present or is present in a mild form when only one of these gene mutations is present. Analysis using the ConSeq server (34), a web server for the identification of structurally and functionally important residues in protein sequences, determined that the location of position 169 in the Cx30.3 protein was at E2, which is exposed and highly conserved throughout evolution. The variants of p.C169 at E2 may result in incompatibility between the different species of connexin proteins to form heterotypic functional channels (35). Therefore, in the present study, it was hypothesized that the c.507C>G mutant of GJB4 is a modifier and risk factor in the development of hearing loss.

In addition, no vestibular symptoms or skin disorders were found in patients with GJB4 gene variants. Notably, one patient with the c.370 C>T heterozygous genotype had inner ear and middle ear deformities on CT analysis, whereas the other patients with Cx30.3 variants were normal. Therefore, it was suggested that c.370 C>T heterozygous variants of GJB4 provide an important base for improving the clinical diagnosis of deaf patients with inner ear and middle ear deformities.

The present study demonstrated that GJB4 may be genetic risk factor for the development of nonsyndromic hearing loss, and the data can be applied for the effective clinical evaluation and management of care for families of children with GJB4. Further investigation will be required to understand how interference of the mutation contributes to hearing loss. In addition, it may used in future prenatal genetic analysis.

Acknowledgements

This study was supported by the National Science Council, Republic of China (nos. NSC 98-2320-B-040-016-MY3 and NSC 101-2320-B-040-014) and the Ministry of Science and Technology (MOST 103-2320-B-040-021-MY3).

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Li TC, Wang WH, Li C and Yang JJ: Association between mutations in the gap junction β4 gene and nonsyndromic hearing loss: Genotype‑phenotype correlation patterns. Mol Med Rep 11: 619-624, 2015
APA
Li, T., Wang, W., Li, C., & Yang, J. (2015). Association between mutations in the gap junction β4 gene and nonsyndromic hearing loss: Genotype‑phenotype correlation patterns. Molecular Medicine Reports, 11, 619-624. https://doi.org/10.3892/mmr.2014.2725
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Li, T., Wang, W., Li, C., Yang, J."Association between mutations in the gap junction β4 gene and nonsyndromic hearing loss: Genotype‑phenotype correlation patterns". Molecular Medicine Reports 11.1 (2015): 619-624.
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Li, T., Wang, W., Li, C., Yang, J."Association between mutations in the gap junction β4 gene and nonsyndromic hearing loss: Genotype‑phenotype correlation patterns". Molecular Medicine Reports 11, no. 1 (2015): 619-624. https://doi.org/10.3892/mmr.2014.2725