1H-NMR-based metabolic profiling of a colorectal cancer CT-26 lung metastasis model in mice
- Authors:
- Published online on: September 13, 2017 https://doi.org/10.3892/or.2017.5954
- Pages: 3044-3054
Abstract
Introduction
Colorectal cancer is one of the most malignant cancers and the third cause of cancer-related mortality worldwide (1). Patients with colon cancer (10–30%) have the tendency to develop lung metastasis (2). Due to the lung metastasis of colon cancer, the 5-year survival rate of colon cancer patients is very low. The prevention and early identification of lung metastasis in colorectal cancer patients may significantly enhance survival rates. Therefore, biomarkers that facilitate the early diagnosis of lung metastasis are highly valuable, and investigating the potential biomarkers, which are closely associated with the progression of lung metastasis from colorectal cancer, is an urgent aim of research.
Although distant metastasis is the major cause of colorectal cancer-related mortality and a large number of colorectal cancer patients develop lung metastasis after treatment, little research has focused on the biomarker detection of lung metastasis from colon cancer. Gorlick et al showed that colorectal cancer metastasis to the lung has a higher thymidylate synthase (TS) level than liver metastasis (3), and increased levels of E2F lead to increased TS expression in the lung metastasis of colorectal cancer (4). In addition, overexpression of HOXB9 was found to promote metastasis in colon cancer and stable knockdown of HOXB9 reduced the liver and lung metastasis of colon cancer in vivo (5). Increasing evidence suggests that cancer stem cells (CSCs) play a crucial role in cancer metastasis (6). Cancer metastasis requires the seeding and successful colonization of CSCs at distant organs (7), and cell surface marker CDCP1 promotes the adhesion of CRC cells to the lung endothelium (8). Although there are various studies that have investigated the biomarkers for colorectal cancer lung metastasis, the underlying mechanism remains unclear.
Metabonomics is a relatively new technique that is rapidly gaining importance. It is an emerging field of research downstream of transcriptomics, genomics and proteomics. The critical purpose of metabonomics is to determine thousands of small molecules in cells, tissues, organs or biological fluids followed by the application of a series of analytical methods such as nuclear magnetic resonance, color spectrum and mass spectrogram (9). Among these analytical technologies, NMR is an ideal instrumental platform for metabolic analysis since it offers essentially universal detection, excellent quantitative precision, and the potential for high throughput screening (>100 samples/day is attainable). In contrast to classical biochemical approaches, which often focus on a single metabolite or single metabolic reaction, metabonomics involves the collection of quantitative data on a broad series of metabolites in an attempt to acquire an overall understanding of metabolism or metabolic dynamics associated with diseases or different stages of diseases. NMR-based metabonomics is widely applied to identify potential biomarkers of cancers, such as gastric (10), breast (11), esophageal (12), colorectal (13,14) and bladder cancer (15). However, little research has focused on the metabonomic profiling of cancer metastasis. To date, only 3 NMR-based metabonomic studies concerning metastasis have been reported including advanced metastatic breast cancer (11), rat hepatocellular carcinoma (16) and renal cell carcinoma metastasis (17), which suggest that alterations in metabolism such as glycolysis, the choline pathway, TCA cycle and glutamine metabolism occur during cancer metastasis. No research has reported the metabolic profiling of colon cancer with the lung metastasis process, to date.
In the present study, we established a murine lung metastasis model of colorectal cancer by an intravenous injection of the murine colorectal cancer cell line CT26 into mice. We applied 1H-NMR to study the metabonomic profiling of mouse lung tissues and identified 42 distinguishing metabolites between the metastasis and normal control groups. Among the 42 distinguishing metabolites, 12 were closely related with the progression of metastasis. Our results indicate that tumor metabolism including glycolysis, glutamine metabolism, and TCA cycle and choline metabolism play a critical role in the mouse colon cancer lung metastasis process. The altered metabolites could be potential biomarkers, which can provide a promising molecular diagnostic approach for the clinical diagnosis and treatment of colon cancer patients with lung metastasis.
Materials and methods
Animals
Syngeneic BALB/c mice (6–8 weeks of age) were obtained from the Beijing Animal Center (Beijing, China) and housed under controlled environmental conditions. The animals (SPF) were maintained at 21°C in 55% humidity, on a 12-h light/12-h dark cycle. All animals were housed in a standard animal laboratory allowing free activity and were provided with standard food and water ad libitum. All animal procedures were performed according to the National Institutes of Health Guide for the Care and Use of Laboratory Animals. All of the animal protocols were reviewed and approved by the Experimental Animal Ethics Committee of Sichuan University (Chengdu, China).
Reagents
Sodium-3-(trimethylsilyl)-2,2,3,3-tetradeuteriopropionate (TSP) was purchased from Sigma-Aldrich (St. Louis, MO, USA). Deuterium oxide (99.8% D) was purchased from Norell®, Inc. (Landisville, NJ, USA). Methanol and chloroform (CDCl3) were purchased from Fisher Scientific (Fairlawn, NJ, USA). Deionized water was obtained from an EASYpure II UV water purification system (Barnstead International, Dubuque, IA, USA).
Cell culture and in vivo lung metastasis model
CT26 (mouse colorectal carcinoma cell line) was purchased from the American Type Culture Collection (ATCC; Manassas, VA, USA), and was cultured in RPMI-1640 medium supplemented with 10% heat-inactivated fetal bovine serum (FBS) (Gibco, Grand Island, NY, USA), 100 U/ml penicillin and 100 U/ml streptomycin at 37°C in a humidified atmosphere with 5% CO2. Cells were passaged at least 2 or 3 times before use.
BALB/c mice (6–8 weeks of age) were used in the present study. Mice in the lung metastasis groups were injected with CT26 cells (2×106 cells/mouse) via tail vein, and they were sacrificed, 7, 14 and 21 days after cell injection, respectively. Mice in the control group were injected with saline via tail vein. Lung tissues were collected and stored at −80°C in formalin for subsequent experiments.
Sample preparation for NMR spectroscopy
Lung tissues of mice were carefully microdissected to ensure that the analyzed tissue contained cancer cells. An amount of 200–500 mg of frozen tissue samples was weighed and suspended in methanol (4 ml/g of tissue) and double distilled water (0.85 ml/g of tissue). The suspension was homogenized with 20 strokes at 800 rpm, and chloroform (2 ml/g of tissue) was added, followed by addition of 50% chloroform (2 ml/g of tissue) and homogenization was repeated. The sample was left on ice for 30 min, and centrifuged at 1,000 × g for 30 min at 4°C. Then, the sample was separated to 3 phases: a water phase at the top, a denatured protein phase in the middle and a lipid phase at the bottom. The water phase of each specimen was collected and evaporated to dryness under a stream of nitrogen. The residue was reconstituted with 580 µl D2O containing 30 µM phosphate-buffered solution (PBS; pH=7.4) and 0.01 mg/ml sodium-3-(trimethylsilyl)-2,2,3,3-tetradeuteriopropionate (TSP) as an internal standard (δ0.0). After centrifugation at 12,000 × g for 5 min, the supernatant was transferred into a 5-mm NMR tube for NMR spectroscopy (18).
1H-NMR spectroscopic analysis
All tissue samples were analyzed using 1H-NMR spectroscopy at 600.13 MHz using a Bruker Avance II 600 spectrometer operating (Bruker BioSpin, Rheinstetten, Germany) at 300 K. A one-dimensional spectrum was acquired using a standard (1D) Carr-Purcell-Meiboom-Gill (CPMG) pulse sequence to suppress the water signal with a relaxation delay of 5 sec. Sixty-four-free induction decays (FIDs) were collected into 64 K data points with a spectral width of 12,335.5-Hz spectral, an acquisition time of 2.66 sec, and a total pulse recycle delay of 7.66 sec. The FIDs were weighted by a Gaussian function with line-broadening factor 20.3 Hz, Gaussian maximum position 0.1, prior to Fourier transformation (19).
Data processing
All NMR data acquired above were subjected to pattern recognition (PR) analysis. Before doing this, the raw data were manually Fourier transformed using MestReNova-6.1.1–6384 software. After phase adjustment and baseline correction, the NMR data were referenced to the TSP resonance at δ0.0. The whole spectrum was divided into 4,500 segments with equal width (0.002 ppm) ranging from 9.5 to 0.5 ppm. The region 5.1–4.7 ppm was removed to exclude the effect of imperfect water suppression. Finally, the data were normalized to eliminate the dilution or bulk mass difference among samples and to give the same total integration value for each spectrum before analysis.
PR analysis
Multivariate analysis was carried out using SIMCA-P + 11 (Umetrics AB, Umeå, Sweden). Principal component analysis (PCA), the unsupervised PR method, was initially applied to analyze the NMR data to separate the lung metastasis nodule samples from normal lung tissues. Partial least squares discriminant analysis (PLS-DA) and orthogonal partial least squares discriminant analysis (OPLS-DA), supervised PR method, were used to improve the separation of the different groups. The PLS-DA model was cross-validated by permutation analysis (200 times) (20,21).
The default 7-round cross validation was applied with 1/7 of the samples being excluded from the mathematical model in each round, in order to guard against over fitting. R2 and Q2 were acquired from the PLS-DA model. The variable importance in the projection (VIP) values of all peaks obtained from the OPLS-DA model was analyzed, and only VIP >1 were considered relevant for group discrimination (22). Otherwise, unpaired Student's t-test (p<0.05) was also used to assess the significance of each metabolite. With both VIP and p-value meeting the requirements, the metabolites were identified as distinguishing metabolites. The corresponding chemical shift of metabolites was acquired through previous literature and the Human Metabolome Database (http://www.hmdb.ca/).
Results
Construction of the lung metastasis model and metabolic profiling of the samples
CT26 cells were injected into the tail vein of BALB/c mice to construct the metastasis model. Then, the lung tissues were collected at 7, 14 and 21 days after cell injection; on the first day of the experiment the specimens of the normal group were also collected without cell injection.
The collected samples underwent extraction, and the aqueous fractions were investigated using NMR. The typical 1H-NMR spectra of the aqueous phase extracts of lung tissues of the different groups are shown in Fig. 1. The standard one-dimension spectrum provided an overview of all and the major metabolites in the integrated regions were identified according to the literature data and the Human Metabolome Database (http://www.hmdb.ca/). Finally, a series of metabolites which were altered at endogenous metabolite levels were observed in the metastasis groups at 7, 14 and 21 days when compared with the normal group. The different metabolites included amino acids, carbohydrates and lipids which are known to be related with metabolic processes, particularly in energy metabolism (23).
PR analysis of the normal and different metastasis groups
Identification of the different metabolites between the normal and metastasis groups was critical for identifying biomarkers that may be useful for diagnosis and therapy of colon cancer patients who have lung metastasis. OPLS-DA analysis was used to investigate differences in metabolites between the normal and metastasis groups. The scores of PC1 and PC2 showed that each metastasis group including 7, 14 and 21 days after injection were clearly separated from the normal group (Fig. 2A). To identify the distinguishing metabolites, their scores and loading plots were obtained from the OPLS-DA analysis (Fig. 2B). The loadings were colored according to the UV model variable weights and the signals in the positive direction indicate upregulated metabolites, the negative signals represent downregulated metabolites in the metastasis groups compared to the normal group. The PLS-DA model was applied and the statistical validation of the corresponding PLS-DA model was carried out by permutation analysis. The parameters of the different metastasis groups were as follows: 7 days, R2=0.92 Q2=0.84; 14 days, R2=0.98 Q2=0.94; 21 days, R2=0.99 Q2=0.98 (Fig. 2C). The results indicated that each model was suitable for data analysis. We summarized the distinguishing metabolites between the normal and metastasis groups (Tables I and II).
Table I.Differential metabolites derived from the OPLS-DA model of 1H-NMR analysis between the normal control and metastasis groups. |
As shown in Table II, acetic acid, choline, creatine, glutamate, glyceryl, glycolate, inosine, isoleucine, lactate, leucine, N-acetyl glycoprotein, oxaloacetate, phosphocholine (PC), phosphocreatine, p-HPA, pyruvate, serine, threonine, tyrosine, uracil, valine and β-hydroxybutyrate were upregulated in the metastasis groups compared with the normal group. While dimethylamine, glutamine, glycine, O-acetyl glycoprotein, sarcosine and succinate were downregulated in the metastasis groups. Many of them increased along with the stage of metastasis. Choline and PC were significantly high in the 7 day group. In addition, O-acetyl glycoprotein decreased obviously with a fold-change (FC) >2.5 in each metastasis group compared to the normal group.
Trending biomarkers
Biomarker identification is important for the detection, diagnosis and treatment of cancer, and is also meaningful to investigate the metastatic process of colon cancer to the lung. We used box-and-whisker plots, which included the concentration ranges, median quartiles and extremes to show the representative metabolites of the previously identified 42 metabolites between the normal and metastasis groups (Fig. 3). A heat map showing the relative abundances of the metabolites is shown in Fig. 4.
Most cancer cells prefer the glycolysis pathway to generate energy even with an adequate oxygen supply; thus, the increased level of lactate in the tumor tissue was not surprising. Furthermore, research has shown that a high lactate concentration is associated with metastasis of tumors consistent with the present study (24,25). Pyruvate, an important product of glycolysis, is increased along with the progression of colon cancer metastasis to the lung, which is a good indicator of active glycogenolysis and glycolysis. Oxaloacetate was also found to be upregulated, which may be due to the activity of pyruvate carboxylase catalyzing the pyruvate which is converted to oxaloacetate. Meanwhile, succinate was obviously downregulated, which suggests that dysregulation of the TCA cycle may be correlated with the lung metastasis of colorectal cancer.
In the present study, glutamate was significantly increased in the metastasis group compared with that in the normal group. It has been reported that glutamate is upregulated in many types of cancers and high levels of glutamate may be associated with the activation of glutaminolysis, due to an increased activity of the mitochondrial enzyme glutaminase in metastatic tumors. In addition, research has shown that glutamate levels are increased in pancreatic cancer, which can promote invasion and migration ability via AMPA receptor activation and Kras-MAPK signaling (26). Thus, elevated glutamate levels may contribute to the metastasis of colon cancer and glutamate can be a biomarker for the detection of lung metastasis derived from colon. Due to the activation of glutaminolysis, glutamine is consumed and utilized by colon tumors at much higher rates than other amino acids; thus, glutamine was found to be obviously downregulated in the metastasis group in our research.
As previously mentioned, there are only 3 literature studies that have reported NMR-based metabonomics of metastatic tumors and our results are partly consistent with previous studies. Choline, a basic constituent of lecithin was upregulated in our research owing to an increased rate of metabolism of phospholipids to lipids, or a greater demand for phospholipids to encourage rapid proliferation and aggression of colon cancer cells (27). Wang et al analyzed the metabonomics of hepatocellular carcinoma with lung metastasis (HLM) rat models and found that choline was increased in HLM rat models compared with the control group (16).
The concentration of N-acetyl glycoproteins in the metastasis groups was higher than that noted in the non-metastasis group and was elevated significantly along with progression. This result was consistent with a previous study concerning advanced metastatic human breast cancer (11). The obvious upregulation of uracil in tissues demonstrated the activation of transcriptions in the process of metastasis to meet the needs of rapid cell proliferation. Then, the high concentration of inosine indicated that the purine metabolism was active in metastatic progression. Leucine, isoleucine and serine were increased in the metastasis group compared with the normal group that satisfy the requirements for structural proteins of cancer cells in metastasis.
Discussion
In the present study, we investigated the metabolic profiling of mouse colorectal cancer with lung metastasis based on 1H-NMR. Forty-two different metabolites were identified and some of them were significantly correlated with the progression of colorectal cancer metastasis to the lung. We summarized the metabolic pathways based on human metabolome database and the Kyoto Encyclopedia of Genes and Genomes (KEGG) and the main disordered pathways included glycolysis, TCA cycle, glutaminolysis, choline metabolism and serine biosynthesis (Fig. 5). To the best of our knowledge, little research has focused on the metabolic profiling of colorectal cancer with lung metastasis. The present study is the first to identify the different metabolites in the lung tissues during the process of metastasis.
We detected metabolites of whole lung between the metastasis groups and normal group due to the ‘seed and soil’ hypothesis which was proposed by Paget early in 1889 (28). It is well known that sites of metastasis are determined not only by the characteristics of the primary tumor cells, but also by the microenvironment of host tissues (29). Therapy for metastasis should be targeted not only against the cancer cells themselves, but also against the homeostatic factors that promote tumor-cell invasion and metastasis in the tumor microenvironment of specific organs (30). Colorectal cancer patients often develop liver and lung metastasis probably due to the fact that these organs provide suitable soil for colon cancer cell colonization. The change in microenvironment may lead to the disorder of metabolism and we found that the metabolites of whole lung tissue could better reflect the change in the microenvironment during the process of metastasis.
Otto Warburg first observed the alteration of cancer cell metabolism early in 1921. He found that most cancer cells prefer to use glucose at a high level and convert it to lactate instead of relying on mitochondrial oxidative phosphorylation to generate energy even in the presence of abundant oxygen. This is termed the ‘Warburg effect’ (31). Recent studies show that aerobic glycolysis is not only crucial for tumor cell growth, but also essential for tumor cell migration and invasion, which is consistent with the results that the lactate level was significantly high in the metastasis groups. Research has reported that lactate induces secretion of hyaluronan by tumor-associated fibroblasts which create a milieu favorable for migration that benefits tumor metastasis. The high level concentration of lactate leads to normal cell death via caspase-mediated activation of the p53-dependent apoptotic pathway (32), but cancer cells can export lactate by monocarboxylate transporters (MCTs) resulting in the acidification of the microenvironment (33). The low pH of the extracellular environment provides a favorable condition for the activation of proteases, such as matrix metalloproteinases (MMPs) (34), which in turn can help cancer cells degrade the extracellular matrix (ECM) and facilitate metastasis (35). Thus, aerobic glycolysis may increase cancer cell migration and invasiveness due to the disturbance of the microenvironment which is beneficial for their proliferation and metastasis but toxic to normal cells (36). Therefore, the increased lactate in lung tissues could benefit the metastatic ability of colorectal cancer cells.
Pyruvate, the end product of glycolysis, was upregulated in our research and a previous study showed that pyruvate promotes cancer cell metastasis. Anoikis resistance, or the ability of cells to live detached from the EMC, is a property of epithelial cancers. Caneba et al found higher pyruvate uptake and oxygen consumption in more invasive ovarian cancer cells than their less invasive counterparts under detached conditions, and pyruvate has an effect on highly invasive ovarian cancer cell migration ability (37).
However, increased aerobic glycolysis, enhanced glutamine metabolism is now considered a key feature of cancer cells and contributes to cancer cell migration. Our research showed moderate downregulation of glutamine and upregulation of glutamate in lung tissues in the metastasis groups compared with the normal group. In cancer cells, glutamine is catabolized to glutamate by glutaminase. Glutamate is then catabolized by glutamate dehydrogenase to α-ketoglutarate to feed the TCA cycle (38). Recent studies suggest that glutamine metabolism contributes to cancer cell migration. Glutamine can support lipogenesis by providing both acetyl-CoA and NADPH, which, in turn, regulates the activation of AKT (39), and the AKT pathway is involved in the migratory and invasive abilities of many cancer cell lines (40,41). In malignant glioma, a high extracellular concentration of glutamate is released, and released glutamate acts as an essential autocrine/paracrine signal that promotes cell invasion (42). Glutamate was also found to promote invasion and migration of pancreatic cancer cells via AMPA receptor activation and K-ras-MAPK signaling (26). Thus, downregulation of glutamine and upregulation of glutamate in the present study was consistent with above study, and may play an important role in lung metastasis in colorectal cancer.
Abnormal choline metabolism is emerging as a metabolic hallmark that is associated with oncogenesis and tumor progression (43). In the present study, two-choline metabolism pathway-related metabolites (choline/phosphocholine) were upregulated. Previous studies have reported the correlation of choline metabolism, cancer metastasis including breast cancer (44) and hepatocellular carcinoma (16), and malignant transformation (43). Choline is an essential nutrient transported by choline transporters from plasma to cells that can be a rate-limiting step in phosphocholine formation. Phosphocholine is synthesized to phosphatidylcholine, which together with other phospholipids form the characteristic bilayer structure of cellular membranes and regulates membrane integrity (45). When highly malignant breast cancer cells were transfected with metastasis suppressor gene nm23 (46,47), it was found that the ratio of phosphocholine/glycerocholine was lower than that of the empty vector-transfected cells, also an increase of phosphocholine level was detected in NIH 3T3 cells transfected with mutant ras oncogene (48). Thus, upregulation of choline and phosphocholine in our research may be due to the activating genes that control cell metastasis in the process of metastasis.
The results from our studies showed that serine biosynthesis was also involved in the process of colorectal cancer metastasis to the lung, with the serine concentration in the metastasis groups higher than that in the normal group. A study of Pollari et al suggested that 3 genes involved in the L-serine biosynthesis pathway, phosphoglycerate dehydrogenase (PHGDH), phosphoserine aminotransferase 1 (PSAT1) and phosphoserine phosphatase (PSPH) were upregulated in highly metastatic breast cancer cells, which is in agreement with our research (49). PHGDH, which catalyses the first step in the serine biosynthesis pathway, is elevated in 70% of estrogen receptor (ER)-negative breast cancers suggesting that serine biosynthesis is active in malignant tumors (50). Ectopic expression of PHGDH in mammary epithelial cells was found to disrupt acinar morphogenesis and induce other phenotypic alterations that may predispose cells to transformation (51). Similarly, glycine and related metabolites, or their associated metabolic pathways, have been identified as central to cancer metastasis (52) and cellular transformation (50,53).
In addition, we observed the upregulation of leucine, isoleucine and valine in the metastasis group relative to the normal group, which is consistent with published literature that reported decreased expression for genes involved in valine, leucine and isoleucine degradation in metastatic colon cancer (54). However, glucose, branched-chain amino acids (BCCAs) including valine, leucine and isoleucine can serve as energy substrates either (38) in brain interstitial space with lower glucose level than that of blood or when glucose is limited some cells can use amino acids to support their survival (55). Thus, the upregulation of BCCAs in our finding may be due to the rapid consumption of glucose, which meets the energy supply during lung metastasis progression. It is also reported that, BCCAs, particularly leucine, enhance tumor invasiveness through activation of the mammalian target of rapamycin complex 1 (mTORC1). Thus, the increase in BCCAs in the lung may provide a suitable microenvironment for metastatic processes.
In conclusion, in the present study, we analyzed the metabolic profiling of colorectal cancer with lung metastasis compared with a normal control based on 1H-NMR spectroscopy combined with multivariate statistical analysis in a mouse model. We identified the distinguishing metabolites and found that metabolic pathways such as glycolysis, TCA cycle, glutaminolysis, choline metabolism and serine biosynthesis, may be involved in the process of metastasis. The present study provides evidence that tumor metabolism regulation plays a critical role in tumor metastasis; the underlying aberrant metabolic pathways could be considered as novel targets for cancer therapy.
Acknowledgements
The present study was supported by the Project of the National Natural Sciences Foundation of China (nos. 81272459 and 81322035).
Glossary
Abbreviations
Abbreviations:
1H-NMR |
1H nuclear magnetic resonance |
PCA |
principal component analysis |
PLS-DA |
partial least squares discriminant analysis |
OPLS-DA |
orthogonal partial least squares discriminant analysis |
TCA |
tricarboxylic acid cycle |
CSCs |
cancer stem cells |
PC |
phosphocholine |
FC |
fold-change |
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