Open Access

Identification of differentially expressed proteins in the gastric mucosal atypical hyperplasia tissue microenvironment

  • Authors:
    • He‑Liang Zhang
    • Chong‑Yuan Liu
    • Wei Ma
    • Lin Huang
    • Chang‑Jian Li
    • Cheng‑Song Li
    • Zhi‑Wei Zhang
  • View Affiliations

  • Published online on: June 11, 2018     https://doi.org/10.3892/ol.2018.8941
  • Pages: 2355-2365
  • Copyright: © Zhang et al. This is an open access article distributed under the terms of Creative Commons Attribution License.

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Abstract

In the present study, the interaction of proteins in the microenvironment of gastric mucosal atypical hyperplasia was analyzed. The stromata of normal gastric mucosa (NGM) and gastric mucosal atypical hyperplasia (GMAH) tissues were purified with laser capture microdissection (LCM). The differentially expressed GMAH proteins of the NGM and GMAH tissues were identified by quantitative proteomic techniques with isotope labeling. The cross‑talk between differentially expressed proteins in NGM and GMAH tissues was then analyzed by bioinformatics. There were 165 differentially expressed proteins identified from the stromata of NGM and GMAH tissues. Among them, 99 proteins were upregulated and 66 were downregulated in GMAH tissue. The present study demonstrated that these proteins in gastric mucosal atypical hyperplasia were involved in cancer‑associated signaling pathways, including the p53, mitogen‑activated protein kinase (MAPK), cell cycle and apoptosis signaling pathways, and were involved in cellular growth, cellular proliferation, apoptosis and the humoral immune response. The results of the present study suggest that the 165 differentially expressed proteins, including S100 calcium‑binding protein A6 (S100A6) and superoxide dismutase 3 (SOD3) in the microenvironment of gastric mucosal atypical hyperplasia, are involved in the p53, MAPK, cell cycle and apoptosis signaling pathways, and serve a function in the pathogenesis of gastric cancer.

Introduction

Gastric carcinoma (GC), a serious threat to human health, is one of the most common malignancies in China, and its incidence and deaths rank first in the digestive system in 2015 (1). The occurrence of GC involves a complex pathological process associated with polygenic interactions and multi-phase evolution (2). The majority of patients experience the typical stages of normal gastric mucosa, chronic atrophic gastritis, precancerous lesions (atypical hyperplasia of gastric mucosa and intestinal metaplasia), early stages of gastric cancer, and advanced stage of disease (3). However, at present, the molecular mechanisms underlying the occurrence of GC remain unclear.

The cross-talk that exists between tumor cells and the microenvironment serves an important function in the occurrence and development of tumors (4). Tumor cells adapt to their microenvironment and exhibit corresponding biological characteristics. The tumor microenvironment refers to the internal environment in which the tumor grows, which is primarily composed of various interstitial cells, blood vessels, nerves, interstitial fluid and a small number of leucocytes (5). Tumor cells are able to induce mesenchymal cells to produce a variety of cytokines and growth factors that promote tumorigenesis and development (6). According to previous studies (7), it is possible to target the formation mechanism of the tumor microenvironment in order to prevent the proliferation and metastasis of tumor cells. Knowledge of the interaction between the microenvironment and tumor cells is expected to provide a rich theoretical basis for the treatment of tumors. The aim of the present study was to elucidate the molecular mechanisms underlying the occurrence of GC by analyzing the protein interactions in gastric mucosal atypical hyperplasia.

Materials and methods

Tissue samples

Matching specimens, including 20 cases of normal gastric mucosa (NGM) tissue and gastric mucosa atypical hyperplasia (GMAH) tissue, were collected from The First Affiliated Hospital of University of South China between September 2016 and June 2017. The Cancer Research Institute of University of South China and The First Affiliated Hospital of University of South China are cooperative relations. Researchers from Cancer Research Institute are permitted to travel to the hospital and collect specimens with the permission of the medical ethics committee of University of South China. Specimens were collected from the stomach within 5 min of resection, and the gastric mucosal surface was washed with physiological saline prior to and following the incision. The samples were immediately frozen in liquid nitrogen and stored at −80°C. Table I presented the clinical data including tumor stage determined by the eighth edition AJCC cancer staging manual (8) of 20 patients with GC. Two senior professional pathologists from Cancer Research Institute of University of South China were asked to independently diagnose the collected tissue samples without knowing any clinical or pathological data.

Table I.

Clinicopathological features of patients with gastric cancer.

Table I.

Clinicopathological features of patients with gastric cancer.

No.SexAge, yearsDifferentiationTumor stage (8)Date of collection
1Male49ModerateIISeptember 2016
2Female64PoorIVSeptember 2016
3Female69PoorIVSeptember 2016
4Male62PoorIIOctober 2016
5Male44ModerateIIOctober 2016
6Male60PoorIINovember 2016
7Male53PoorIINovember 2016
8Female40PoorIIINovember 2016
9Male67PoorIIDecember 2016
10Female81PoorIIDecember 2016
11Female47HighIIJanuary 2017
12Male63PoorIIFebruary 2017
13Male52PoorIVMarch 2017
14Male46ModerateIIMarch 2017
15Male51PoorIIMarch 2017
16Male60ModerateIIMarch 2017
17Female66PoorIIIApril 2017
18Male67PoorIIApril 2017
19Female68PoorIIMay 2017
20Female62PoorIIIJune 2017
Ethics statement

The human GC tissue samples were collected from The First Affiliated Hospital of University of South China according to the institutional and governmental guidelines. All patients involved in the present study provided written informed consent, and the present study was approved by the medical ethics committee of University of South China (Hengyang, China).

Preparation and staining of frozen sections

The tissue samples were removed from liquid nitrogen and placed on a cryostat device carrier (Leica Biosystems GmbH, Wetzlar, Germany). Following the addition of optimal cutting temperature compound (OCT) embedding agent (Leica Microsystems GmbH), the samples were frozen at −25°C for 20 min. Next, the samples were immobilized to the platform of the cryostat device, and frozen sections were made at a thickness of 8 µm. The frozen sections were affixed to film slides (Leica Microsystems GmbH) pretreated with ultraviolet (UV) light. Finally, the slides were fixed with 75% ethanol at 4°C for 60 sec, stained with 0.5% methyl green (Sigma-Aldrich; Merck KGaA, Darmstadt, Germany) at 4°C for 30 sec and discolored with 95% ethanol at 4°C for 5 sec.

Laser capture microdissection (LCM)

The frozen tissue sections stained with methyl green were placed on an LCM apparatus (Leica LMD6, Leica Microsystems GmbH) platform. The target tissue was outlined on the display, and the laser automatically cut the target tissue in the slice. Dissolved one tablet of protease inhibitor cocktail tablets (Roche Diagnostics, Basel, Switzerland) in 50 ml ultrapure water to prepare 5% working solutions. The tissues were collected in a tube containing 2–3 µl protease inhibitor working solutions and were frozen at −80°C for later use.

Protein extraction and isobaric tags for relative and absolute quantitation (iTRAQ) isotope labeling

The mesenchyma of the NGM and GMAH tissues were extracted using a lysis buffer (10 mM PMSF, 65 mM dithiothreitol, 7 M urea and 2 M thiourea) (GE Healthcare Life Sciences, Little Chalfont, UK) and centrifuged at 4°C, 12,000 × g for 30 min. The supernatant included the total proteins of the NGM and GMAH mesenchyma. The total proteins were extracted and quantified using a bicinchonic acid protein assay kit (Beyotime Institute of Biotechnology, Shanghai, China), according to the manufacturer's protocol. The total proteins of the NGM mesenchyma were labeled with iTRAQ reagent 114; total proteins of the GMAH mesenchyma were labeled with iTRAQ reagent 118 (both Applied Biosystems; Thermo Fisher Scientific, Inc., Waltham, MA, USA) according to the manufacturer's protocol. A total of 100 µl ultrapure water was used to end the reaction. All protein samples were homogenized and lyophilized, and then the samples were dissolved in deionized water containing 0.1% formic acid (FA; Tedia Company, Fairfield, OH, USA). The marked samples were eluted twice with Sep-Pak C18 1 cc Vac cartridges (Waters Corporation, Milford, MA, USA) with deionized water containing 0.1% FA and then once with 50% acetonitrile (ACN) (Thermo Fisher Scientific, Inc.) containing 0.1% FA. The cleaning solution was collected and lyophilized.

Identification of differentially expressed proteins

The samples marked with iTRAQ were dissolved in 1 ml strong cation-exchange (SCX) buffer [25% (v/v) ACN and 10 mM KH2PO4, pH 2.6] for SCX separation. The two samples containing mesenchymal proteins of NGM and GMAH were mixed and loaded into a polysulfoethyl column and segregated using a 20AD high performance liquid chromatography (HPLC) system (Shimadzu Corporation, Kyoto, Japan) with the following conditions: i) 10 mM KH2PO4 and 25% ACN, pH 2.6; ii) 10 mM KH2PO4, 350 mM KCl and 25% ACN, pH 2.6. The following settings were used: UV detection wavelength: 214/280 nm; flow rate: 200 µl/min for 60 min; salt gradient: from 5% i) at 5 min to 25% ii) at 40 min. Next, the products were concentrated by vacuum centrifugation for reverse-phase HPLC-mass spectrometry (MS) analysis. The samples were dissolved in 50 µl 5% ACN containing 0.1% FA and were loaded into a Zorbax 300SB-C18 column (Agilent Technologies, Inc., Santa Clara, CA, USA). The conditions were as follows: i) 5% ACN, 0.1% FA; ii) 95% ACN, 0.1% FA. Flow rate: 300 nl/min for 90 min. Salt gradient: from 5% i) at 5 min to 35% ii) at 70 min. The data were analyzed using QSTAR-XL (Applied Biosystems; Thermo Fisher Scientific, Inc.) and tandem MS (MS/MS). Finally, the IPI human database (version 3.45; URL: http://www.ebi.ac.uk/IPI) was searched for protein information, and the confidence level was set to be >95%, and the ion peak areas of m/z 114 and 118 were integrated to perform relative quantitative analysis of proteins.

Western blot analysis

The total NGM and GMAH mesenchymal proteins were mixed with 5X loading buffer (Beyotime Institute of Biotechnology) and boiled for 5 min. The proteins had been quantified using a bicinchonic acid protein assay kit (Beyotime Institute of Biotechnology). Next, the samples were separated using 10% gradient SDS-PAGE gels at 30 µg per lane and transferred onto PVDF membranes (Merck KGaA). The membranes were blotted with 5% fat-free milk suspended in TBST at room temperature for 1 h, incubated at 4°C overnight with S100 calcium-binding protein A6 (S100A6) antibody (1:1,000) (sc-53950; Santa Cruz Biotechnology, Inc., Dallas, TX, USA) and superoxide dismutase 3 (SOD3) antibody (1:1,000) (sc-58427; Santa Cruz Biotechnology, Inc.), washed and then incubated with goat anti-mouse IgG-HRP (1:2,000) (sc-2005; Santa Cruz Biotechnology, Inc.) at room temperature for 2 h. Detection of immunoreactivity was achieved using enhanced chemiluminescence (GE Healthcare Life Sciences).

Immunohistochemistry

The present study used S-P immunohistochemical staining kits (MXB Company, Fujian Province, China; URL: http://www.maxim.com.cn/). The NGM and GMAH tissues were fixed with 10% formalin and embedded in paraffin. The expression of S100A6 and SOD3 proteins were detected according to the manufacturer's protocol. Briefly, 4-µm-thick sections were prepared and mounted on poly-L-lysine-coated glass slides, air-dried, deparaffinized with xylene and rehydrated in a descending ethanol series. Following microwave treatment for 20 min, endogenous peroxidase activity was suppressed using 0.3% hydrogen peroxide. The sections were treated with 5% normal goat serum (SL038) (Solarbio Life Sciences, Tongzhou Dist. Beijing, China) at room temperature for 15 min to block non-specific binding. The sections were incubated with anti-S100A6 (1:100) or anti-SOD3 (1:100) antibody overnight at 4°C, and then incubated with goat anti-mouse IgG-FITC (1:200) (sc-2010; Santa Cruz Biotechnology, Inc.) at room temperature for 60 min followed by horseradish peroxidase-labeled streptavidin for 5 min at room temperature. The sections were counterstained with 0.1% hematoxylin at room temperature for 30 sec. The tissue staining was observed under a light microscope at a magnification of ×40. The final immunoreactive score was based on protein staining intensity and the percentage of positive cells. Staining intensity was defined as 1 (negative), 2 (yellow) and 3 (brown). The percentage of positive cells was defined as 1 (<10% positive cells), 2 (11–50% positive cells) and 3 (>50% positive cells). The final immunoreactive score was calculated as: Staining intensity × percentage of positive cells. The classification of the final score was defined as - (score 1), + (score 2–4) and +++ (score >4).

Protein signaling pathways and interaction analysis

Visant software (version 3.91; URL: http://visant.bu.edu) was used to analyze the interactions between proteins. Additionally, the network of direct interactions between proteins was analyzed. The Clue Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis of protein signaling pathways was performed using Cytoscape software (version 2.8.2; URL: http://www.cytoscape.org). GO_BP, GO_CC and GO_MF analyses were executed with David Functional Annotation (URL: http://david.abcc.ncifcrf.gov).

Statistical analysis

The data are reported as the mean ± standard deviation. Statistical analysis was performed using SPSS statistical package (version 18.0; SPSS, Inc., Chicago, IL, USA) as follows: Comparison between individual subgroups was performed using the Mann-Whitney U test, and correlation analysis between groups was performed using Spearman's rank correlation test. P<0.05 was considered to indicate a statistically significant difference.

Results

Purified mesenchyma of NGM and GMAH tissues

The NGM and GMAH tissues were obtained from fresh specimens of GC following surgical resection, and all tissues were confirmed by pathology. The mesenchyma of NGM and GMAH tissues were purified by LCM (Fig. 1). The purity of objective groups was >95%.

Identification of differentially expressed proteins

The NGM and GMAH mesenchyma proteins were divided into solutions and marked using different isotopic iTRAQ. Next, the NGM and GMAH proteins were separated using a 20AD HPLC system and identified using QSTAR-XL MS/MS. A total of 165 differentially expressed proteins between the NGM and GMAH mesenchyma were identified (Table II). The G/N value (NGM/GMAH tissue) was determined as the mean protein expression level. In total, 99 proteins (G/N>1.5) were identified to be upregulated and 66 proteins (G/N<0.667) were identified to be downregulated in the GMAH mesenchyma. The expression levels of the S100A6 and SOD3 proteins were different in the mesenchyma of the NGM and GMAH tissues, and were associated with tumorigenesis in previous studies (9,10). Fig. 2 presents the MS results and the quantification of the S100A6 (Fig. 2A) and SOD3 proteins (Fig. 2B).

Table II.

Differentially expressed proteins between the NGM and GMAH mesenchyma.

Table II.

Differentially expressed proteins between the NGM and GMAH mesenchyma.

No.Accession no.Protein nameGMAH vs. NGM
1IPI00872780.1ANXA4, annexin A4↑1.5704
2IPI00027230.3HSP90B1, endoplasmin precursor↑1.5704
3IPI00024920.1ATP5D, ATP synthase subunit δ↑1.5704
4IPI00013508.5ACTN1, α-actinin-1↑1.5848
5IPI00216135.1TPM1, isoform 3 of tropomyosin α-1 chain↑1.5995
6IPI00788802.1TKT, transketolase variant↑1.6292
7IPI00647915.1TAGLN2, 24 kDa protein↑1.6292
8IPI00025874.2RPN1↑1.6750
9IPI00020599.1CALR, calreticulin precursor↑1.7062
10IPI00219219.3LGALS1, galectin-1↑1.7379
11IPI00218918.5ANXA1, annexin A1↑1.7379
12IPI00218733.6SOD1, superoxide dismutase↑1.7864
13IPI00010796.1P4HB, protein disulfide-isomerase precursor↑1.7864
14IPI00414283.5FN1, fibronectin 1 isoform 4 preproprotein↑1.8198
15IPI00298547.3PARK7, protein DJ-1↑1.8198
16IPI00794402.1ARHGDIA, 28 kDa protein↑1.8365
17IPI00219446.5PEBP1, phosphatidylethanolamine-binding protein 1↑1.8879
18IPI00553177.1SERPINA1↑1.9771
19IPI00029623.1PSMA6, proteasome subunit α type-6↑1.9952
20IPI00026314.1GSN, isoform 1 of gelsolin precursor↑2.0137
21IPI00479186.5PKM2↑2.0700
22IPI00033494.3MRLC2, myosin regulatory light chain↑2.0700
23IPI00418471.6VIM, vimentin↑2.2492
24IPI00169383.3PGK1, phosphoglycerate kinase 1↑2.2492
25IPI00396321.1LRRC59, leucine-rich repeat-containing protein 59↑2.2696
26IPI00027947.6CTRL, chymotrypsin-like protease↑2.2696
27IPI00884105.1LAMP1↑2.3337
28IPI00789605.1MYL6↑2.3770
29IPI00219018.7GAPDH, glyceraldehyde-3-phosphate dehydrogenase↑2.3770
30IPI00021405.3LMNA, isoform A of lamin-A/C↑2.3770
31IPI00654755.3HBB, hemoglobin subunit β↑2.3987
32IPI00024284.4HSPG2↑2.4661
33IPI00020987.1PRELP, prolargin precursor↑2.4888
34IPI00871843.1TGM2, 81 kDa protein↑2.5349
35IPI00418169.3ANXA2, annexin A2 isoform 1↑2.5349
36IPI00291136.4COL6A1, collagen α-1(VI) chain↑2.5349
37IPI00009771.6LMNB2, lamin-B2↑2.5349
38IPI00742225.1LOC646483, DNA-binding protein TAXREB107 isoform 1↑2.5589
39IPI00297084.7DDOST↑2.6062
40IPI00216138.6TAGLN, transgelin↑2.6546
41IPI00025252.1PDIA3, protein disulfide-isomerase A3↑2.6788
42IPI00414676.6HSP90AB1, heat-shock protein HSP 90-β↑2.8843
43IPI00009904.1PDIA4, protein disulfide-isomerase A4↑2.8843
44IPI00382696.1FLNB, isoform 2 of filamin-B↑2.9104
45IPI00022200.2COL6A3, α3 type VI collagen isoform 1↑2.9922
46IPI00479145.2KRT19, type I cytoskeletal 19↑3.0202
47IPI00792191.1GATM, glycine amidinotransferase↑3.0479
48IPI00872814.1Uncharacterized protein MSN (fragment)↑3.1328
49IPI00008274.7CAP1, adenylate cyclase-associated protein 1↑3.1328
50IPI00887241.1LOC650788, 40S ribosomal protein S28↑3.2206
51IPI00829626.1IGL@ protein↑3.2206
52IPI00220278.5MYL9, myosin regulatory light chain 2↑3.2206
53IPI00021766.5RTN4, isoform 1 of reticulon-4↑3.2510
54IPI00871932.1SPTBN1, 276 kDa protein↑3.3422
55IPI00465431.7LGALS3, galectin-3↑3.3422
56IPI00333541.6FLNA, filamin-A↑3.4674
57IPI00221226.7ANXA6, annexin A6↑3.5323
58IPI00025465.1OGN, mimecan precursor↑3.5323
59IPI00013296.3RPS18↑3.5651
60IPI00299145.9KRT6C, type II cytoskeletal 6C↑3.7665
61IPI00515087.2CTRB2, chymotrypsinogen B2↑4.0933
62IPI00450768.7KRT17, type I cytoskeletal 17↑4.0933
63IPI00745872.2ALB, isoform 1 of serum albumin precursor↑4.2070
64IPI00218914.5ALDH1A1, retinal dehydrogenase 1↑4.8309
65IPI00027350.3PRDX2, peroxiredoxin-2↑4.8309
66IPI00000874.1PRDX1, peroxiredoxin-1↑4.8309
67IPI00887678.1LOC654188, peptidylprolyl isomerase A-like↑5.1520
68IPI00848226.1GNB2L1↑5.3937
69IPI00883857.1HNRNPU↑5.4945
70IPI00744153.2Uncharacterized protein GCG↑5.8072
71IPI00020986.2LUM, lumican precursor↑5.8617
72IPI00010471.5LCP1, plastin-2↑5.9172
73IPI00028030.3COMP, cartilage oligomeric matrix protein↑6.1958
74IPI00220271.3AKR1A1, alcohol dehydrogenase↑6.6050
75IPI00000690.1AIFM1, isoform 1 of apoptosis-inducing factor 1↑6.6050
76IPI00296099.6THBS1, thrombospondin-1 precursor↑6.7935
77IPI00798430.1TF, transferrin variant↑7.0472
78IPI00410241.2POSTN, periostin, osteoblast specific factor↑7.1124
79IPI00646304.4PPIB, peptidylprolyl isomerase B precursor↑7.3801
80IPI00022391.1APCS, serum amyloid P-component precursor↑7.3801
81IPI00021263.3YWHAZ, 14-3-3 protein ζ/δ↑7.3801
82IPI00607708.3LDHA, isoform 2 of L-lactate dehydrogenase A chain↑8.3963
83IPI00749250.2ACTR2 45 kDa protein↑8.7108
84IPI00004457.3AOC3, membrane copper amine oxidase↑10.2775
85IPI00027463.1S100A6, protein S100 A6↑10.3734
86IPI00215719.6RPL18, 60S ribosomal protein L18↑10.7643
87IPI00014361.1TSTA3, GDP-L-fucose synthetase↑11.3766
88IPI00012750.3RPS25, 40S ribosomal protein S25↑12.2399
89IPI00010414.4PDLIM1, PDZ and LIM domain protein 1↑12.2399
90IPI00744375.1HLA-C↑12.7065
91IPI00399007.5IGHG2↑13.5501
92IPI00291006.1MDH2↑14.4509
93IPI00807428.1Putative uncharacterized protein↑16.8919
94IPI00738499.2FTL, ferritin light chain↑20.8768
95IPI00215965.2HNRNPA1↑26.5252
96IPI00790262.1TTLL3↑27.0270
97IPI00550991.3SERPINA3↑32.4675
98IPI00015911.1DLD, dihydrolipoyl dehydrogenase↑38.7597
99IPI00060715.1KCTD12↑39.0625
100IPI00465084.6DES, desmin↓0.0406
101IPI00396378.3HNRNPA2B1↓0.0855
102IPI00514669.1SH3BGRL↓0.0991
103IPI00027827.2SOD3↓0.1057
104IPI00025476.1AMY1B, pancreatic α-amylase precursor↓0.1086
105IPI00473011.3HBD, hemoglobin subunit δ↓0.1127
106IPI00847342.1KRT7, keratin 7↓0.1148
107IPI00877792.1FGG, 50 kDa protein↓0.1259
108IPI00815665.1PRSS1, PRSS1 protein↓0.1259
109IPI00011654.2TUBB, tubulin β chain↓0.1306
110IPI00021885.1FGA, isoform 1 of fibrinogen α chain precursor↓0.1318
111IPI00009634.1SQRDL↓0.1803
112IPI00478003.1A2M, α2-macroglobulin precursor↓0.2014
113IPI00867509.1CORO1C, coronin-1C_i3 protein↓0.2291
114IPI00642455.2THBS2, thrombospondin 2↓0.2291
115IPI00000105.4MVP, major vault protein↓0.2377
116IPI00027720.1PNLIP, pancreatic triacylglycerol lipase precursor↓0.2421
117IPI00140420.4SND1↓0.2805
118IPI00515061.3HIST1H2BJ, histone H2B type 1-J↓0.2884
119IPI00410714.5HBA1, hemoglobin subunit α↓0.2911
120IPI00295663.1ELA3A, elastase-3A precursor↓0.2965
121IPI00298497.3FGB, fibrinogen β chain precursor↓0.2992
122IPI00759832.1YWHAB, isoform short of 14-3-3 protein β/α↓0.3020
123IPI00003527.5SLC9A3R1↓0.3221
124IPI00788782.1ATP1A3, Na+/K+-ATPase α3 subunit variant↓0.3404
125IPI00028908.3NID2, nidogen-2 precursor↓0.3532
126IPI00186290.6EEF2, elongation factor 2↓0.3698
127IPI00010779.4TPM4, isoform 1 of tropomyosin α-4 chain↓0.3767
128IPI00873444.1UBC, RPS27A 79 kDa protein↓0.3837
129IPI00156689.3VAT1↓0.3945
130IPI00178926.2IGJ, immunoglobulin J chain↓0.3981
131IPI00021827.3DEFA3, neutrophil defensin 3 precursor↓0.3981
132IPI00337741.4APEH, acylamino-acid-releasing enzyme↓0.4055
133IPI00292530.1ITIH1, inter-α-trypsin inhibitor heavy chain H1↓0.4169
134IPI00031522.2HADHA, trifunctional enzyme subunit α↓0.4207
135IPI00426051.3Putative uncharacterized protein DKFZp686C15213↓0.4246
136IPI00009027.1REG1A, lithostathine-1-α precursor↓0.4246
137IPI00300725.7KRT6A, type II cytoskeletal 6A↓0.4365
138IPI00555744.6RPL14 protein↓0.4529
139IPI00465361.4RPL13, 60S ribosomal protein L13↓0.4571
140IPI00843810.2CEL, carboxyl ester lipase↓0.4699
141IPI00024933.3RPL12, 60S ribosomal protein L12↓0.4966
142IPI00845263.1FN1, fibronectin 1 isoform 2 preproprotein↓0.5012
143IPI00449920.1IGHA1, highly similar to Ig α-1 chain C region↓0.5105
144IPI00289862.3SCRN1, secernin-1↓0.5105
145IPI00002745.1CTSZ, cathepsin Z precursor↓0.5152
146IPI00005924.4PNLIPRP2, pancreatic lipase-related protein 2↓0.5297
147IPI00873137.1COL1A2, 130 kDa protein↓0.5346
148IPI00783512.1Reversed PTPRN2 110 kDa protein↓0.5346
149IPI00552768.1TXN, thioredoxin↓0.5346
150IPI00294380.5PCK2↓0.5395
151IPI00007765.5HSPA9, stress-70 protein, mitochondrial precursor↓0.5445
152IPI00472724.1EEF1AL3, elongation factor 1-α-like 3↓0.5495
153IPI00297646.4COL1A1, collagen α-1(I) chain↓0.5495
154IPI00307162.2VCL, isoform 2 of vinculin↓0.5649
155IPI00009826.2CPB1, carboxypeptidase B precursor↓0.5649
156IPI00003362.2HSPA5 protein↓0.5649
157IPI00305461.2ITIH2, inter-α-trypsin inhibitor heavy chain H2↓0.5754
158IPI00027497.5GPI, glucose-6-phosphate isomerase↓0.5971
159IPI00061005.4ERP27, endoplasmic reticulum-resident protein ERp27↓0.6138
160IPI00298994.6TLN1, talin-1↓0.6194
161IPI00026302.3RPL31, 60S ribosomal protein L31↓0.6194
162IPI00856098.1p180/ribosome receptor↓0.6252
163IPI00216134.3TPM1, tropomyosin 1 α chain isoform 7↓0.6252
164IPI00009823.3CPA1, carboxypeptidase A1 precursor↓0.6486
165IPI00009867.3KRT5, type II cytoskeletal 5↓0.6607

[i] S100A6 and SOD3 are highlighted in bold. NGM, normal gastric mucosa; GMAH, gastric mucosal atypical hyperplasia; ↑, upregulation of expression in GMAH mesenchyma; ↓, downregulation of expression in GMAH mesenchyma.

S100A6 is upregulated and SOD3 is downregulated in GMAH mesenchymal tissue

The 20 samples of NGM and GMAH tissues were collected and purified. Next, the tissues were sectioned. The expression levels of the S100A6 and SOD3 proteins in NGM and GMAH mesenchyma were detected using western blotting and immunohistochemistry. The result of western blotting indicated that the S100A6 protein was upregulated, but that the SOD3 protein was significantly downregulated in the GMAH mesenchyma when compared with the NGM tissue (P<0.01; Fig. 3A). Immunohistochemistry analysis demonstrated that S100A6 and SOD3 proteins were expressed in the mesenchyma of NGM and GMAH tissues; however, the staining intensity and expression levels of the S100A6 protein in the GMAH tissue were increased compared with those in the NGM tissue. The expression of the SOD3 protein was the opposite (Fig. 3B and C). Therefore, the S100A6 and SOD3 expression levels were significantly different between the NGM and GMAH tissues (P<0.05; Table III). These results were consistent with the results of quantitative proteomics in the present study (Table II).

Table III.

Expression levels of S100A6 and SOD3 proteins in the NGM and GMAH tissues.

Table III.

Expression levels of S100A6 and SOD3 proteins in the NGM and GMAH tissues.

Score

ProteinnLow (−)Moderate (+)High (+++)Positive rate, %
SOD3
  NGM20  8  8460.00
  GMAH2014  4230.00a
S100A6
  NGM2013  4335.00
  GMAH20  711265.00a

a P<0.05, GMAH vs. NGM tissues. SOD3, superoxide dismutase 3; S100A6, S100 calcium-binding protein A6; NGM, normal gastric mucosa; GMAH, gastric mucosal atypical hyperplasia.

Interaction of differentially expressed proteins and relevant signaling pathways analysis

The interaction between 165 differentially expressed proteins in GMAH were analyzed using Visant software. It was identified that 140 proteins acted as network nodes and interacted with each other. The results of KEGG signal pathway analysis demonstrated that the 165 proteins were involved in a number of tumor signaling pathways, including the p53, mitogen-activated protein kinase (MAPK), cell cycle, and apoptosis signaling pathways (Fig. 4). Next, the biological functions of the 165 proteins were analyzed with the David tool, which indicated that the proteins were involved in cell growth, proliferation, apoptosis and the humoral immune response (results not shown).

Discussion

The microenvironment is composed of stromal cells, immune cells and cytokines, and the tumor microenvironment has been proven to determine the biological behavior of tumor cells (11,12). It is hypothesized that the interactions of protease, cytokines and receptors in the tumor microenvironment affect the osmotic pressure and metabolism of the tumor, which may result in immune escape and neoplasia (13,14). It is important to monitor cell behavior and prevent cancer by understanding changes in the microenvironment, which serve important functions in tumor occurrence and development (4). In the present study, 165 proteins that were differentially expressed between the NGM and GMAH tissue microenvironments were screened. These proteins were demonstrated to be involved in signaling pathways associated with cancer, including the MAPK, VEGF and p53 signaling pathways, suggesting that these proteins may regulate cell growth, proliferation, apoptosis and the humoral immune response. However, the interaction network should be further characterized in follow-up studies. In the present study, the expression of S100A6 and SOD3 was analyzed by western blotting and immunohistochemical staining techniques, and was identified to be significantly different and associated with tumorigenesis. These results were consistent with the results of quantitative proteomics in the present study.

S100A6 is a member of the S100 protein family (15). S100A6 has a number of biological functions, including participating in the degradation and ubiquitination of β-catenin, promoting apoptosis, interacting with extracellular matrix proteins, enhancing cell metabolism and skeleton depolymerization, participating in endocytosis and exocytosis, adjusting enzyme activity, inhibiting protein kinase C-mediated phosphorylation and participating in gene transcription (16,17). A number of studies have demonstrated that S100A6 is also associated with the occurrence and development of tumors and is upregulated in several tumors, including ovarian cancer, colorectal cancer, pancreatic cancer, liver cancer, malignant melanoma and osteosarcoma (18,19). According to the results of the present study, S100A6 is upregulated in the GMAH stroma. This protein may contribute to the malignant transformation of epithelial cells of gastric mucosa and promote cell invasion and metastasis. The S100A6 protein may be a potential biomarker for monitoring malignant cell transformation.

Mammalian SODs have three subtypes, namely the cytoplasmic SOD (CuZnSOD or SOD1), mitochondrial SOD (MnSOD or SOD2) and extracellular SOD (EC-SOD or SOD3) (20). SOD3 serves an important function in maintaining the oxidation balance that prevents nuclear DNA and protein oxidative damage in the extracellular matrix and nucleus (21). Previous studies have identified that the level of SOD3 was decreased in a variety of tumors, including lung, breast and thyroid cancer, and renal cell carcinoma (10,22). SOD3 is widely expressed in normal tissues; low or no expression of SOD3 causes an imbalance in the extracellular redox environment and cancer occurs more frequently in an imbalanced environment (23). Therefore, a low or no expression of SOD3 may be a risk factor for malignant cell transformation (24). The results of the present study demonstrated that SOD3 was downregulated in GMAH stroma, which resulted in DNA damage in gastric mucosa epithelial cells and GC. Therefore, the early detection of SOD3 may predict the occurrence of GC.

As the tumor microenvironment serves a critical function in GC occurrence and development, it important to identify the proteins present in the GMAH microenvironment. The present study identified a total of 165 differentially expressed proteins in GMAH stroma. These data will further clarify the molecular mechanisms of GC occurrence as well as potentially serving as prognostic markers for the early detection and diagnosis of GC.

Acknowledgements

The authors would like to thank Dr Qiang Zhao from The First Affiliated Hospital of University of South China (Hengyang, China) for his help in collecting specimens. The authors would also like to thank Professor Zhao-Yang Luo and Professor Xiu-Tian Zhou from the Cancer Research Institute of the University of South China (Hengyang, China) for their assistance in the diagnosis of specimens.

Funding

The present study was supported by the Hunan Provincial Innovation Foundation For Postgraduates (grant no. CX2016B478), the Doctoral Research Start-Up Fund of the University of South China (grant no. 2016XQD21), the Hunan Provincial Groundbreaking Platform Open Fund of the University of China (grant no. 10K052, 12K094 and 13K083), the Hunan Provincial Education Department Foundation of China (grant nos. 11C1112 and 12C0340), the Hunan Provincial Health Department Foundation of China (grant nos. B2013-048 and 2014–163) and the Construct Program of the Key Discipline in Hunan Province of China (2011–76).

Availability of data and materials

All data generated or analyzed during this study are included in this published article.

Authors' contributions

ZWZ and CYL conceived and designed the experiments. HLZ, WM and CJL performed the experiments. LH and CSL analyzed the data. HLZ and ZWZ wrote the paper. All authors read and approved the manuscript.

Ethics approval and consent to participate

All patients involved in this study provided written informed consent, and the present study was approved by the Medical Ethics Committee of University of South China. Written informed consent was obtained from all participants.

Consent for publication

All patients provided their written informed consent for the publication of their data.

Competing interests

The authors declare that they have no conflicts of interest.

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August-2018
Volume 16 Issue 2

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Spandidos Publications style
Zhang HL, Liu CY, Ma W, Huang L, Li CJ, Li CS and Zhang ZW: Identification of differentially expressed proteins in the gastric mucosal atypical hyperplasia tissue microenvironment. Oncol Lett 16: 2355-2365, 2018
APA
Zhang, H., Liu, C., Ma, W., Huang, L., Li, C., Li, C., & Zhang, Z. (2018). Identification of differentially expressed proteins in the gastric mucosal atypical hyperplasia tissue microenvironment. Oncology Letters, 16, 2355-2365. https://doi.org/10.3892/ol.2018.8941
MLA
Zhang, H., Liu, C., Ma, W., Huang, L., Li, C., Li, C., Zhang, Z."Identification of differentially expressed proteins in the gastric mucosal atypical hyperplasia tissue microenvironment". Oncology Letters 16.2 (2018): 2355-2365.
Chicago
Zhang, H., Liu, C., Ma, W., Huang, L., Li, C., Li, C., Zhang, Z."Identification of differentially expressed proteins in the gastric mucosal atypical hyperplasia tissue microenvironment". Oncology Letters 16, no. 2 (2018): 2355-2365. https://doi.org/10.3892/ol.2018.8941