|
1
|
Siegel RL, Miller KD and Jemal A: Cancer
statistics, 2016. CA Cancer J Clin. 66:7–30. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
2
|
Reid BJ, Li X, Galipeau PC and Vaughan TL:
Barrett's oesophagus and oesophageal adenocarcinoma: Time for a new
synthesis. Nat Rev Cancer. 10:87–101. 2010. View Article : Google Scholar : PubMed/NCBI
|
|
3
|
Cowie A, Noble F and Underwood T:
Strategies to improve outcomes in esophageal adenocarcinoma. Expert
Rev Anticancer Ther. 14:677–687. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
4
|
Kalatskaya I: Overview of major molecular
alterations during progression from Barrett's esophagus to
esophageal adenocarcinoma. Ann NY Acad Sci. 1381:74–91. 2016.
View Article : Google Scholar : PubMed/NCBI
|
|
5
|
Ten Kate FJ, Suzuki L, Dorssers LC,
Dinjens WN, Jones DT, Nieboer D, Doukas M, Van Lanschot JJ,
Wijnhoven BP, Looijenga LH, et al: Pattern of p53 protein
expression is predictive for survival in chemoradiotherapy-naive
esophageal adenocarcinoma. Oncotarget. 8:104123–104135.
2017.PubMed/NCBI
|
|
6
|
Buas MF, Levine DM, Makar KW, Utsugi H,
Onstad L, Li X, Galipeau PC, Shaheen NJ, Hardie LJ, Romero Y, et
al: Integrative post-genome-wide association analysis of CDKN2A and
TP53 SNPs and risk of esophageal adenocarcinoma. Carcinogenesis.
35:2740–2747. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
7
|
Wang L, Jin JQ, Zhou Y, Tian Z, Jablons DM
and He B: Gli is activated and promotes epithelial-mesenchymal
transition in human esophageal adenocarcinoma. Oncotarget.
9:853–865. 2017.PubMed/NCBI
|
|
8
|
Lin J, Myers AL, Wang Z, Nancarrow DJ,
Ferrer-Torres D, Handlogten A, Leverenz K, Bao J, Thomas DG, Wang
TD, et al: Osteopontin (OPN/SPP1) isoforms collectively enhance
tumor cell invasion and dissemination in esophageal adenocarcinoma.
Oncotarget. 6:22239–22257. 2015.PubMed/NCBI
|
|
9
|
Han DY, Fu D, Xi H, Li QY, Feng LJ, Zhang
W, Ji G, Xiao JC and Wei Q: Genomic expression profiling and
bioinformatics analysis of pancreatic cancer. Mol Med Rep.
12:4133–4140. 2015. View Article : Google Scholar : PubMed/NCBI
|
|
10
|
Zhang C, Peng L, Zhang Y, Liu Z, Li W,
Chen S and Li G: The identification of key genes and pathways in
hepatocellular carcinoma by bioinformatics analysis of
high-throughput data. Med Oncol. 34:1012017. View Article : Google Scholar : PubMed/NCBI
|
|
11
|
Peng D, Guo Y, Chen H, Zhao S, Washington
K, Hu T, Shyr Y and El-Rifai W: Integrated molecular analysis
reveals complex interactions between genomic and epigenomic
alterations in esophageal adenocarcinomas. Sci Rep. 7:407292017.
View Article : Google Scholar : PubMed/NCBI
|
|
12
|
Gentleman R: Bioinformatics and
Computational Biology Solutions Using R and Bioconductor. Springer
Science+Business Media; New York: 2005, View Article : Google Scholar
|
|
13
|
Carvalho B, Bengtsson H, Speed TP and
Irizarry RA: Exploration, normalization, and genotype calls of
high-density oligonucleotide SNP array data. Biostatistics.
8:485–499. 2007. View Article : Google Scholar : PubMed/NCBI
|
|
14
|
Smyth GK: Linear models and empirical
bayes methods for assessing differential expression in microarray
experiments. Stat Appl Genet Mol Biol. 3:1–25. 2004. View Article : Google Scholar
|
|
15
|
Bader GD and Hogue CW: An automated method
for finding molecular complexes in large protein interaction
networks. BMC Bioinformatics. 4:22003. View Article : Google Scholar : PubMed/NCBI
|
|
16
|
Scardoni G, Tosadori G, Faizan M, Spoto F,
Fabbri F and Laudanna C: Biological network analysis with
CentiScaPe: Centralities and experimental dataset integration.
F1000Res. 3:1392014.PubMed/NCBI
|
|
17
|
Coleman HG, Xie SH and Lagergren J: The
epidemiology of esophageal adenocarcinoma. Gastroenterology.
154:390–405. 2018. View Article : Google Scholar : PubMed/NCBI
|
|
18
|
Guglietta S and Rescigno M:
Hypercoagulation and complement: Connected players in tumor
development and metastases. Semin Immunol. 28:578–586. 2016.
View Article : Google Scholar : PubMed/NCBI
|
|
19
|
Alfaro C, Sanmamed MF, Rodríguez-Ruiz ME,
Teijeira Á, Oñate C, González Á, Ponz M, Schalper KA, Pérez-Gracia
JL and Melero I: Interleukin-8 in cancer pathogenesis, treatment
and follow-up. Cancer Treat Rev. 60:24–31. 2017. View Article : Google Scholar : PubMed/NCBI
|
|
20
|
Li A, Varney ML, Valasek J, Godfrey M,
Dave BJ and Singh RK: Autocrine role of interleukin-8 in induction
of endothelial cell proliferation, survival, migration and MMP-2
production and angiogenesis. Angiogenesis. 8:63–71. 2005.
View Article : Google Scholar : PubMed/NCBI
|
|
21
|
Shrivastava MS, Hussain Z, Giricz O,
Shenoy N, Polineni R, Maitra A and Verma A: Targeting chemokine
pathways in esophageal adenocarcinoma. Cell Cycle. 13:3320–3327.
2014. View Article : Google Scholar : PubMed/NCBI
|
|
22
|
Xiaoyun X, Chaofei H, Weiqi Z, Chen C,
Lixia L, Queping L, Cong P, Shuang Z, Juan S and Xiang C: Possible
involvement of F1F0-ATP synthase and intracellular ATP in
keratinocyte differentiation in normal skin and skin lesions. Sci
Rep. 7:426722017. View Article : Google Scholar : PubMed/NCBI
|
|
23
|
Bernard BA, Asselineau D,
Schaffar-Deshayes L and Darmon MY: Abnormal sequence of expression
of differentiation markers in psoriatic epidermis: Inversion of two
steps in the differentiation program? J Invest Dermatol.
90:801–805. 1988. View Article : Google Scholar : PubMed/NCBI
|
|
24
|
Shan J, Oshima T, Farre R, Fukui H, Watari
J and Miwa H: IL-4 induces columnar-like differentiation of
esophageal squamous epithelium through JAK/PI3K pathway: Possible
role in pathogenesis of Barrett's esophagus. Am J Physiol
Gastrointest Liver Physiol. 306:G641–G649. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
25
|
Jackson HW, Defamie V, Waterhouse P and
Khokha R: TIMPs: Versatile extracellular regulators in cancer. Nat
Rev Cancer. 17:38–53. 2017. View Article : Google Scholar : PubMed/NCBI
|
|
26
|
Kozłowski M, Laudański W, Mroczko B,
Szmitkowski M, Milewski R and Łapuć G: Serum tissue inhibitor of
metalloproteinase 1 (TIMP-1) and vascular endothelial growth factor
A (VEGF-A) are associated with prognosis in esophageal cancer
patients. Adv Med Sci. 58:227–234. 2013. View Article : Google Scholar : PubMed/NCBI
|
|
27
|
Tian L, Lu ZP, Cai BB, Zhao LT, Qian D, Xu
QC, Wu PF, Zhu Y, Zhang JJ, Du Q, et al: Activation of pancreatic
stellate cells involves an EMT-like process. Int J Oncol.
48:783–792. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
28
|
Pankov R and Yamada KM: Fibronectin at a
glance. J Cell Sci. 115:3861–3863. 2002. View Article : Google Scholar : PubMed/NCBI
|
|
29
|
McMahon B and Kwaan HC: The plasminogen
activator system and cancer. Pathophysiol Haemost Thromb.
36:184–194. 2008. View Article : Google Scholar : PubMed/NCBI
|
|
30
|
Placencio VR and DeClerck YA: Plasminogen
activator inhibitor-1 in cancer: Rationale and insight for future
therapeutic testing. Cancer Res. 75:2969–2974. 2015. View Article : Google Scholar : PubMed/NCBI
|
|
31
|
Jänicke F, Schmitt M and Graeff H:
Clinical relevance of the urokinase-type and tissue-type
plasminogen activators and of their type 1 inhibitor in breast
cancer. Semin Thromb Hemost. 17:303–312. 1991. View Article : Google Scholar : PubMed/NCBI
|
|
32
|
Ortiz G, Salica JP, Chuluyan EH and Gallo
JE: Diabetic retinopathy: Could the alpha-1 antitrypsin be a
therapeutic option? Biol Res. 47:582014. View Article : Google Scholar : PubMed/NCBI
|
|
33
|
Li Y, Miao L, Yu M, Shi M, Wang Y, Yang J,
Xiao Y and Cai H: α1-antitrypsin promotes lung adenocarcinoma
metastasis through upregulating fibronectin expression. Int J
Oncol. 50:1955–1964. 2017. View Article : Google Scholar : PubMed/NCBI
|
|
34
|
Mutesa L, Azad AK, Verhaeghe C, Segers K,
Vanbellinghen JF, Ngendahayo L, Rusingiza EK, Mutwa PR, Rulisa S,
Koulischer L, et al: Genetic analysis of Rwandan patients with
cystic fibrosis-like symptoms: Identification of novel cystic
fibrosis transmembrane conductance regulator and epithelial sodium
channel gene variants. Chest. 135:1233–1242. 2009. View Article : Google Scholar : PubMed/NCBI
|
|
35
|
Kerem B, Rommens JM, Buchanan JA,
Markiewicz D, Cox TK, Chakravarti A, Buchwald M and Tsui LC:
Identification of the cystic fibrosis gene: Genetic analysis.
Science. 245:1073–1080. 1989. View Article : Google Scholar : PubMed/NCBI
|
|
36
|
Gharahkhani P, Fitzgerald RC, Vaughan TL,
Palles C, Gockel I, Tomlinson I, Buas MF, May A, Gerges C, Anders
M, et al: Barrett's and Esophageal Adenocarcinoma Consortium
(BEACON); Esophageal Adenocarcinoma GenEtics Consortium (EAGLE);
Wellcome Trust Case Control Consortium 2 (WTCCC2): Genome-wide
association studies in oesophageal adenocarcinoma and Barrett's
oesophagus: A large-scale meta-analysis. Lancet Oncol.
17:1363–1373. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
37
|
Ward LD and Kellis M: HaploReg: A resource
for exploring chromatin states, conservation, and regulatory motif
alterations within sets of genetically linked variants. Nucleic
Acids Res. 40:D930–D934. 2012. View Article : Google Scholar : PubMed/NCBI
|
|
38
|
Rittling SR and Singh R: Osteopontin in
immune-mediated diseases. J Dent Res. 94:1638–1645. 2015.
View Article : Google Scholar : PubMed/NCBI
|
|
39
|
Zhang Z, Wang Y, Zhang J, Zhong J and Yang
R: COL1A1 promotes metastasis in colorectal cancer by regulating
the WNT/PCP pathway. Mol Med Rep. 17:5037–5042. 2018.PubMed/NCBI
|
|
40
|
Tian ZQ, Li ZH, Wen SW, Zhang YF, Li Y,
Cheng JG and Wang GY: Identification of commonly dysregulated genes
in non-small-cell lung cancer by integrated analysis of microarray
data and qRT-PCR validation. Hai. 193:583–592. 2015.
|
|
41
|
Song Y, Kim SH, Kim KM, Choi EK, Kim J and
Seo HR: Activated hepatic stellate cells play pivotal roles in
hepatocellular carcinoma cell chemoresistance and migration in
multicellular tumor spheroids. Sci Rep. 6:367502016. View Article : Google Scholar : PubMed/NCBI
|
|
42
|
Li J, Ding Y and Li A: Identification of
COL1A1 and COL1A2 as candidate prognostic factors in gastric
cancer. World J Surg Oncol. 14:2972016. View Article : Google Scholar : PubMed/NCBI
|
|
43
|
Casselbrant A, Edebo A, Wennerblom J,
Lönroth H, Helander HF, Vieth M, Lundell L and Fändriks L: Actions
by angiotensin II on esophageal contractility in humans.
Gastroenterology. 132:249–260. 2007. View Article : Google Scholar : PubMed/NCBI
|
|
44
|
Wang D and Dubois RN: Eicosanoids and
cancer. Nat Rev Cancer. 10:181–193. 2010. View Article : Google Scholar : PubMed/NCBI
|
