|
1
|
Goodenberger ML and Jenkins RB: Genetics
of adult glioma. Cancer Genetics. 205:613–621. 2012. View Article : Google Scholar : PubMed/NCBI
|
|
2
|
Bartel DP: MicroRNAs: genomics,
biogenesis, mechanism, and function. Cell. 116:281–297. 2004.
View Article : Google Scholar : PubMed/NCBI
|
|
3
|
Calin GA and Croce CM: MicroRNA signatures
in human cancers. Nat Rev Cancer. 6:857–866. 2006. View Article : Google Scholar : PubMed/NCBI
|
|
4
|
Waldman SA and Terzic A: Translating
microRNA discovery into clinical biomarkers in cancer. JAMA.
297:1923–1925. 2007. View Article : Google Scholar : PubMed/NCBI
|
|
5
|
Garzon R, Marcucci G and Croce CM:
Targeting microRNAs in cancer: rationale, strategies and
challenges. Nat Rev Drug Discov. 9:775–789. 2010. View Article : Google Scholar : PubMed/NCBI
|
|
6
|
Li M, Li J, Liu L, Li W, Yang Y and Yuan
J: MicroRNA in Human Glioma. Cancers (Basel). 5:1306–1331. 2013.
View Article : Google Scholar
|
|
7
|
Visani M, de Biase D, Marucci G, et al:
Definition of miRNAs expression profile in glioblastoma samples:
the relevance of non-neoplastic brain reference. PloS One.
8:e553142013. View Article : Google Scholar : PubMed/NCBI
|
|
8
|
Yang C, Wang C, Chen X, et al:
Identification of seven serum microRNAs from a genome-wide serum
microRNA expression profile as potential noninvasive biomarkers for
malignant astrocytomas. Int J Cancer. 132:116–127. 2013. View Article : Google Scholar
|
|
9
|
Chakraborty S and Datta S and Datta S:
Surrogate variable analysis using partial least squares (SVA-PLS)
in gene expression studies. Bioinformatics. 28:799–806. 2012.
View Article : Google Scholar : PubMed/NCBI
|
|
10
|
Ji GL, Yang ZJ and You WJ: PLS-based gene
selection and identification of tumor-specific genes. IEEE Trans
Syst Man Cybern C Appl Rev. 41:830–841. 2011. View Article : Google Scholar
|
|
11
|
Gao QG, Li ZM and Wu KQ: Partial least
squares based analysis of pathways in recurrent breast cancer. Eur
Rev Med Pharmacol Sci. 17:2159–2165. 2013.PubMed/NCBI
|
|
12
|
Irizarry RA, Hobbs B, Collin F, et al:
Exploration, normalization, and summaries of high density
oligonucleotide array probe level data. Biostatistics. 4:249–264.
2003. View Article : Google Scholar : PubMed/NCBI
|
|
13
|
Martins JPA, Teófilo RF and Ferreira MMC:
Computational performance and cross-validation error precision of
five PLS algorithms using designed and real data sets. J Chemom.
24:320–332. 2010.
|
|
14
|
Gosselin R, Rodrigue D and Duchesne C: A
bootstrap-VIP approach for selecting wavelength intervals in
spectral imaging applications. Chemometr Intell Lab Syst.
100:12–21. 2010. View Article : Google Scholar
|
|
15
|
Smyth GK, Michaud J and Scott HS: Use of
within-array replicate spots for assessing differential expression
in microarray experiments. Bioinformatics. 21:2067–2075. 2005.
View Article : Google Scholar : PubMed/NCBI
|
|
16
|
Maragkakis M, Alexiou P, Papadopoulos GL,
et al: Accurate microRNA target prediction correlates with protein
repression levels. BMC Bioinformatics. 10:2952009. View Article : Google Scholar : PubMed/NCBI
|
|
17
|
John B, Enright AJ, Aravin A, Tuschl T,
Sander C and Marks DS: Human MicroRNA targets. PLoS Biol.
2:e3632004. View Article : Google Scholar : PubMed/NCBI
|
|
18
|
Jeggari A, Marks DS and Larsson E:
miRcode: a map of putative microRNA target sites in the long
non-coding transcriptome. Bioinformatics. 28:2062–2063. 2012.
View Article : Google Scholar : PubMed/NCBI
|
|
19
|
Lewis BP, Shih IH, Jones-Rhoades MW,
Bartel DP and Burge CB: Prediction of mammalian microRNA targets.
Cell. 115:787–798. 2003. View Article : Google Scholar : PubMed/NCBI
|
|
20
|
Shannon P, Markiel A, Ozier O, et al:
Cytoscape: a software environment for integrated models of
biomolecular interaction networks. Genome Res. 13:2498–2504. 2003.
View Article : Google Scholar : PubMed/NCBI
|
|
21
|
Hermansen SK, Dahlrot RH, Nielsen BS,
Hansen S and Kristensen BW: MiR-21 expression in the tumor cell
compartment holds unfavorable prognostic value in gliomas. J
Neurooncol. 111:71–81. 2013. View Article : Google Scholar
|
|
22
|
Wu L, Li G, Feng D, et al: MicroRNA-21
expression is associated with overall survival in patients with
glioma. Diagn Pathol. 8:2002013. View Article : Google Scholar : PubMed/NCBI
|
|
23
|
Li WB, Chen HY, Zhang W, et al:
Relationship between magnetic resonance imaging features and miRNA
gene expression in patients with glioblastoma multiforme. Chin Med
J (Engl). 126:2881–2885. 2013.
|
|
24
|
Stambolic V, Suzuki A, de Pompa JL, et al:
Negative regulation of PKB/Akt-dependent cell survival by the tumor
suppressor PTEN. Cell. 95:29–39. 1998. View Article : Google Scholar : PubMed/NCBI
|
|
25
|
Long C, Jiang L, Wei F, et al: Integrated
miRNA-mRNA analysis revealing the potential roles of miRNAs in
chordomas. PloS One. 8:e666762013. View Article : Google Scholar : PubMed/NCBI
|
|
26
|
Jin JC, Jin XL, Zhang X, Piao YS and Liu
SP: Effect of OSW-1 on microRNA expression profiles of hepatoma
cells and functions of novel microRNAs. Mol Med Rep. 7:1831–1837.
2013.PubMed/NCBI
|
|
27
|
Pencheva N, Tran H, Buss C, et al:
Convergent multi-miRNA targeting of ApoE drives LRP1/LRP8-dependent
melanoma metastasis and angiogenesis. Cell. 151:1068–1082. 2012.
View Article : Google Scholar : PubMed/NCBI
|
|
28
|
Persson H, Kvist A, Rego N, et al:
Identification of new microRNAs in paired normal and tumor breast
tissue suggests a dual role for the ERBB2/Her2 gene. Cancer Res.
71:78–86. 2011. View Article : Google Scholar : PubMed/NCBI
|
|
29
|
Wei KC, Huang CY, Chen PY, et al:
Evaluation of the prognostic value of CD44 in glioblastoma
multiforme. Anticancer Res. 30:253–259. 2010.PubMed/NCBI
|
|
30
|
Lonjon M, Quentien MH, Risso JJ, et al:
Alteration of striatal dopaminergic function induced by glioma
development: a microdialysis and immunohistological study in the
rat striatum. Neuroscience Lett. 354:131–134. 2004. View Article : Google Scholar
|
|
31
|
Brun M, Glubrecht DD, Baksh S and Godbout
R: Calcineurin regulates nuclear factor I dephosphorylation and
activity in malignant glioma cell lines. J Biol Chem.
288:24104–24115. 2013. View Article : Google Scholar : PubMed/NCBI
|
