|
1
|
Sugiura-Ogasawara M, Ozaki Y and Suzumori
N: Management of recurrent miscarriage. J Obstet Gynaecol Res.
40:1174–1179. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
2
|
Dempsey MA, Flood K, Burke N, Murray A,
Cotter B, Mullers S, Dicker P, Fletcher P, Geary M, Kenny D and
Malone FD: Platelet function in patients with a history of
unexplained recurrent miscarriage who subsequently miscarry again.
Eur J Obstet Gynecol Reprod Biol. 188:61–65. 2015. View Article : Google Scholar : PubMed/NCBI
|
|
3
|
Christiansen OB, Larsen EC, Egerup P,
Lunoee L, Egestad L and Nielsen HS: Intravenous immunoglobulin
treatment for secondary recurrent miscarriage: A randomised,
double-blind, placebo-controlled tria. BJOG. 122:500–508. 2015.
View Article : Google Scholar : PubMed/NCBI
|
|
4
|
Obiero JA, Waititu KK, Mulei I, Omar FI,
Jaoko W and Mwethera PG: Baboon vaginal microbial flora. J Med
Primatol. 45:147–155. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
5
|
Farr A, Kiss H, Hagmann M, Machal S,
Holzer I, Kueronya V, Husslein PW and Petricevic L: Role of
lactobacillus species in the intermediate vaginal flora in early
pregnancy: A retrospective cohort study. PLoS One. 10:e01441812015.
View Article : Google Scholar : PubMed/NCBI
|
|
6
|
Romero R, Chaiworapongsa T, Kuivaniemi H
and Tromp G: Bacterial vaginosis, the inflammatory response and the
risk of preterm birth: A role for genetic epidemiology in the
prevention of preterm birth. Am J Obstet Gynecol. 190:1509–1519.
2004. View Article : Google Scholar : PubMed/NCBI
|
|
7
|
Romero HD and Andreu DA: Bacterial
vaginosis. Enfermedades Infecciosas Y Microbiol Clin. 34 (Suppl
3):14–18. 2016. View Article : Google Scholar
|
|
8
|
Tseng CH, Lin JT, Ho HJ, Lai ZL, Wang CB,
Tang SL and Wu CY: Gastric microbiota and predicted gene functions
are altered after subtotal gastrectomy in patients with gastric
cancer. Sci Rep. 6:207012016. View Article : Google Scholar : PubMed/NCBI
|
|
9
|
NIH HMP Working Group, ; Peterson J,
Garges S, Giovanni M, McInnes P, Wang L, Schloss JA, Bonazzi V,
McEwen JE, Wetterstrand KA, et al: The NIH human microbiome
project. Genome Res. 19:2317–2323. 2009. View Article : Google Scholar : PubMed/NCBI
|
|
10
|
Human Microbiome Jumpstart Reference
Strains Consortium, ; Nelson KE, Weinstock GM, Highlander SK,
Worley KC, Creasy HH, Wortman JR, Rusch DB, Mitreva M, Sodergren E,
et al: A catalog of reference genomes from the human microbiome.
Science. 328:994–999. 2010. View Article : Google Scholar : PubMed/NCBI
|
|
11
|
Ling Z, Liu X, Chen X, Zhu H, Nelson KE,
Xia Y, Li L and Xiang C: Diversity of cervicovaginal microbiota
associated with female lower genital tract infections. Microb Ecol.
61:704–714. 2011. View Article : Google Scholar : PubMed/NCBI
|
|
12
|
Ravel J, Gajer P, Abdo Z, Schneider GM,
Koenig SS, McCulle SL, Karlebach S, Gorle R, Russell J, Tacket CO,
et al: Vaginal microbiome of reproductive-age women. Proc Natl Acad
Sci USA. 108 (Suppl 1):4680–4687. 2011. View Article : Google Scholar : PubMed/NCBI
|
|
13
|
Leitch H and Kiss H: Asymptomatic
bacterial vaginosis and intermediate flora as risk factors for
adverse pregnancy outcome. Best Pract Res Clin Obstet Gynaecol.
21:375–390. 2007. View Article : Google Scholar : PubMed/NCBI
|
|
14
|
Allsworth JE and Peipert JF: Prevalence of
bacterial vaginosis: 2001–2004 National Health and Nutrition
Examination Survey data. Obstet Gynecol. 109:114–120. 2007.
View Article : Google Scholar : PubMed/NCBI
|
|
15
|
Trabert B and Misra DP: Risk factors for
bacterial vaginosis during pregnancy among African American women.
Am J Obstet Gynecol. 197:477.e1–e8. 2007. View Article : Google Scholar
|
|
16
|
Donders GG, Veerecken A, Bosmans E,
Dekersmaecker A, Salembier G and Spitz B: Definition of a type of
abnormal vaginal flora that is distinct from bacterial vaginosis:
Aerobic vaginitis. BJOG. 109:34–43. 2002. View Article : Google Scholar : PubMed/NCBI
|
|
17
|
Caporaso JG, Lauber CL, Walters WA,
Berg-Lyons D, Lozupone CA, Turnbaugh PJ, Fierer N and Knight R:
Global patterns of 16S rRNA diversity at a depth of millions of
sequences per sample. Proc Natl Acad Sci USA. 108 (Suppl
1):4516–4522. 2011. View Article : Google Scholar : PubMed/NCBI
|
|
18
|
Aguirre E, Galiana A, Mira A, Guardiola R,
Sánchez-Guillén L, Garcia-Pachon E, Santibañez M, Royo G and
Rodríguez JC: Analysis of microbiota in stable patients with
chronic obstructive pulmonary disease. APMIS. 123:427–432. 2015.
View Article : Google Scholar : PubMed/NCBI
|
|
19
|
Zhang J, Kobert K, Flouri T and Stamatakis
A: PEAR: A fast and accurate Illumina Paired-End reAd mergeR.
Bioinformatics. 30:614–620. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
20
|
Schmieder R and Edwards R: Quality control
and preprocessing of metagenomic datasets. Bioinformatics.
27:863–864. 2011. View Article : Google Scholar : PubMed/NCBI
|
|
21
|
Magoč T and Salzberg SL: FLASH: Fast
length adjustment of short reads to improve genome assemblies.
Bioinformatics. 27:2957–2963. 2011. View Article : Google Scholar : PubMed/NCBI
|
|
22
|
Edgar RC: Search and clustering orders of
magnitude faster than BLAST. Bioinformatics. 26:2460–2461. 2010.
View Article : Google Scholar : PubMed/NCBI
|
|
23
|
Edgar RC, Haas BJ, Clemente JC, Quince C
and Knight R: UCHIME improves sensitivity and speed of chimera
detection. Bioinformatics. 27:2194–2200. 2011. View Article : Google Scholar : PubMed/NCBI
|
|
24
|
Schloss PD, Westcott SL, Ryabin T, Hall
JR, Hartmann M, Hollister EB, Lesniewski RA, Oakley BB, Parks DH,
Robinson CJ, et al: Introducing mothur: Open-source,
platform-independent, community-supported software for describing
and comparing microbial communities. Appl Environ Microbiol.
75:7537–7541. 2009. View Article : Google Scholar : PubMed/NCBI
|
|
25
|
Snipen L and Liland KH: micropan: An
R-package for microbial pan-genomics. BMC Bioinformatics.
16:792015. View Article : Google Scholar : PubMed/NCBI
|
|
26
|
Langille MG, Zaneveld J, Caporaso JG,
McDonald D, Knights D, Reyes JA, Clemente JC, Burkepile DE, Vega
Thurber RL, Knight R, et al: Predictive functional profiling of
microbial communities using 16S rRNA marker gene sequences. Nat
Biotechnol. 31:814–821. 2013. View
Article : Google Scholar : PubMed/NCBI
|
|
27
|
Parks DH, Tyson GW, Hugenholtz P and Beiko
RG: STAMP: Statistical analysis of taxonomic and functional
profiles. Bioinformatics. 30:3123–3124. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
28
|
Hernándezrodríguez C, Romerogonzález R,
Albanicampanario M, Figueroa-Damián R, Meraz-Cruz N and
Hernández-Guerrero C: Vaginal microbiota of healthy pregnant
mexican women is constituted by four lactobacillus species and,
several vaginosis-associated bacteria. Infect Dis Obstet Gynecol.
2011:8514852011.PubMed/NCBI
|
|
29
|
Wells CL, Jechorek RP and Maddaus MA: The
translocation of intestinal facultative and anaerobic bacteria in
defined flora mice. Microb Eco Health Dis. 1:227–235. 1988.
|
|
30
|
Mendes-Soares H, Suzuki H, Hickey RJ and
Forney LJ: Comparative functional genomics of Lactobacillus spp.
reveals possible mechanisms for specialization of vaginal
lactobacilli to their environment. J Bacteriol. 196:1458–1470.
2014. View Article : Google Scholar : PubMed/NCBI
|
|
31
|
Petricevic L, Domig KJ, Nierscher FJ,
Sandhofer MJ, Fidesser M, Krondorfer I, Husslein P, Kneifel W and
Kiss H: Characterisation of the vaginal Lactobacillus microbiota
associated with preterm delivery. Sci Rep. 4:51362014. View Article : Google Scholar : PubMed/NCBI
|
|
32
|
Lu Y, Chen J, Zheng J, Hu G, Wang J, Huang
C, Lou L, Wang X and Zeng Y: Mucosal adherent bacterial dysbiosis
in patients with colorectal adenomas. Sci Rep. 6:263372016.
View Article : Google Scholar : PubMed/NCBI
|
|
33
|
Kuon RJ, Togawa R, Vomstein K, Weber M,
Goeggl T, Strowitzki T, Markert UR, Zimmermann S, Daniel V, Dalpke
AH and Toth B: Higher prevalence of colonization with gardnerella
vaginalis and gram-negative anaerobes in patients with recurrent
miscarriage and elevated peripheral natural killer cells. J Reprod
Immunol. 120:15–19. 2017. View Article : Google Scholar : PubMed/NCBI
|
|
34
|
Mcdonald HM and Chambers HM: Intrauterine
infection and spontaneous midgestation abortion: Is the spectrum of
microorganisms similar to that in preterm labor? Infect Dis Obst
Gynecol. 8:220–227. 2000. View Article : Google Scholar
|
|
35
|
Goldstein EJ, Tyrrell KL and Citron DM:
Lactobacillus species: Taxonomic complexity and controversial
susceptibilities. Clin Infect Dis. 60 (Suppl 2):S98–S107. 2015.
View Article : Google Scholar : PubMed/NCBI
|
