|
1
|
Hasanov Z, Ruckdeschel T, Kapel S, Mogler
C, Appak S, Spegg C and Augustin HG: Role of Endosialin during
atherosclerosis progression. Atherosclerosis. 241(e14)2015.
View Article : Google Scholar
|
|
2
|
Salic K, Wielinga PY, Verschuren L,
Gjorstrup P, Kleemann R and Kooistra T: Intervention with
anti-inflammatory RVE1 attenuates atherosclerosis without
decreasing plasma cholesterol and adds to the anti-atherogenic
effect of atorvastatin. Atherosclerosis. 235(e267)2014. View Article : Google Scholar
|
|
3
|
Campbell LA and Rosenfeld ME: Infection
and atherosclerosis development. Arch Med Res. 46:339–350.
2015.PubMed/NCBI View Article : Google Scholar
|
|
4
|
Ross R: The pathogenesis of
atherosclerosis: A perspective for the 1990s. Nature. 362:801–809.
1993.PubMed/NCBI View
Article : Google Scholar
|
|
5
|
Campbell JH, Efendy JL, Smith NJ and
Campbell GR: Molecular basis by which garlic suppresses
atherosclerosis. J Nutr. 131:1006–1009. 2001.PubMed/NCBI View Article : Google Scholar
|
|
6
|
Portales-Casamar E, Lussier AA, Jones MJ,
MacIsaac JL, Edgar RD, Mah SM, Barhdadi A, Provost S,
Lemieux-Perreault LP, Cynader MS, et al: DNA methylation signature
of human fetal alcohol spectrum disorder. Epigenetics Chromatin.
9(25)2016.PubMed/NCBI View Article : Google Scholar
|
|
7
|
Razin A and Riggs AD: DNA methylation and
gene function. Science. 210:604–610. 1980.PubMed/NCBI View Article : Google Scholar
|
|
8
|
Esteller M and Herman JG: Cancer as an
epigenetic disease: DNA methylation and chromatin alterations in
human tumours. J Pathol. 196:1–7. 2002.PubMed/NCBI View Article : Google Scholar
|
|
9
|
Masliah E, Dumaop W, Galasko D and
Desplats P: Distinctive patterns of DNA methylation associated with
Parkinson disease: Identification of concordant epigenetic changes
in brain and peripheral blood leukocytes. Epigenetics. 8:1030–1038.
2013.PubMed/NCBI View Article : Google Scholar
|
|
10
|
Gopalakrishnan S, Van Emburgh BO and
Robertson KD: DNA methylation in development and human disease.
Mutat Res. 647:30–38. 2008.PubMed/NCBI View Article : Google Scholar
|
|
11
|
Wu P, Farrell WE, Haworth KE, Emes RD,
Kitchen MO, Glossop JR, Hanna FW and Fryer AA: Maternal genome-wide
DNA methylation profiling in gestational diabetes shows distinctive
disease-associated changes relative to matched healthy pregnancies.
Epigenetics. 13:122–128. 2018.PubMed/NCBI View Article : Google Scholar
|
|
12
|
Chen CY and Ye F: Particle swarm
optimization algorithm and its application to clustering analysis.
In: IEEE International Conference on Networking, Sensing and
Control. IEEE, Taiwan. pp789–794. 2004. View Article : Google Scholar
|
|
13
|
Diday E and Simon JC: Clustering analysis.
Commun Cybern. 10:47–94. 1976.
|
|
14
|
Deu-Pons J, Schroeder MP and Lopez-Bigas
N: Heatmap: An interactive heatmap viewer for the web.
Bioinformatics. 30:1757–1758. 2014.PubMed/NCBI View Article : Google Scholar
|
|
15
|
Kestler HA, Müller A, Kraus JM, Buchholz
M, Gress TM, Liu H, Kane DW, Zeeberg BR and Weinstein JN:
VennMaster: Area-proportional Euler diagrams for functional GO
analysis of microarrays. BMC Bioinformatics. 9(67)2008.PubMed/NCBI View Article : Google Scholar
|
|
16
|
Ashburner M, Ball CA, Blake JA, Botstein
D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT,
et al: Gene ontology: tool for the unification of biology. The Gene
Ontology Consortium. Nat Genet. 25:25–29. 2000.PubMed/NCBI View
Article : Google Scholar
|
|
17
|
Du Z, Zhou X, Ling Y, Zhang Z and Su Z:
agriGO: A GO analysis toolkit for the agricultural community.
Nucleic Acids Res. 38:64–70. 2010.PubMed/NCBI View Article : Google Scholar
|
|
18
|
Ogata H, Goto S, Sato K, Fujibucji W, Bono
H and Kanehisa M: KEGG: Kyoto encyclopedia of genes and genomes.
Nucleic Acids Res. 27:29–34. 1999.PubMed/NCBI View Article : Google Scholar
|
|
19
|
Kim HJ: Role of nucleotide-binding and
oligomerization domain 2 protein (NOD2) in the development of
atherosclerosis. Korean J Physiol Pharmacol. 19:479–484.
2015.PubMed/NCBI View Article : Google Scholar
|
|
20
|
Bernhard D, Pfister G, Huck CW, Kind M,
Salvenmoser W, Bonn GK and Wick G: Disruption of vascular
endothelial homeostasis by tobacco smoke: Impact on
atherosclerosis. FASEB J. 17:2302–2304. 2003.PubMed/NCBI View Article : Google Scholar
|
|
21
|
McCully KS: Homocysteine and the
pathogenesis of atherosclerosis. Expert Rev Clin Pharmacol.
8:211–219. 2015.PubMed/NCBI View Article : Google Scholar
|
|
22
|
Goncharov NV, Avdonin PV, Nadeev AD,
Zharkikh IL and Jenkins RO: Reactive oxygen species in pathogenesis
of atherosclerosis. Curr Pharm Des. 21:1134–1146. 2015.PubMed/NCBI View Article : Google Scholar
|
|
23
|
Ma X, Ma C and Zheng X: MicroRNA-155 in
the pathogenesis of atherosclerosis: A conflicting role? Heart Lung
Circ. 22:811–818. 2013. View Article : Google Scholar
|
|
24
|
Khyzha N, Alizada A, Wilson MD and Fish
JE: Epigenetics of atherosclerosis: Emerging mechanisms and
methods. Trends Mol Med. 23:332–347. 2017.PubMed/NCBI View Article : Google Scholar
|
|
25
|
Bustos FJ, Ampuero E, Jury N, Aguilar R,
Falahi F, Toledo J, Ahumada J, Lata J, Cubillos P, Henríquez B, et
al: Epigenetic editing of the Dlg4/PSD95 gene improves cognition in
aged and Alzheimer's disease mice. Brain. 140:3252–3268.
2017.PubMed/NCBI View Article : Google Scholar
|
|
26
|
Kawamoto R, Ninomiya D, Hasegawa Y, Kasai
Y, Kusunoki T, Ohtsuka N, Kumagi T and Abe M: Mildly elevated serum
bilirubin levels are negatively associated with carotid
atherosclerosis among elderly persons. PLoS One.
9(e114281)2014.PubMed/NCBI View Article : Google Scholar
|
|
27
|
Zhai C, Cheng J, Mujahid H, Wang H, Kong
J, Yin Y, Li J, Zhang Y, Ji X and Chen W: Selective inhibition of
PI3K/Akt/mTOR signaling pathway regulates autophagy of macrophage
and vulnerability of atherosclerotic plaque. PLoS One.
9(e90563)2014.PubMed/NCBI View Article : Google Scholar
|
|
28
|
Lu XL, Zhao CH, Yao XL and Zhang H:
Quercetin attenuates high fructose feeding-induced atherosclerosis
by suppressing inflammation and apoptosis via ROS-regulated
PI3K/AKT signaling pathway. Biomed Pharmacother. 85:658–671.
2017.PubMed/NCBI View Article : Google Scholar
|
|
29
|
Cui C, Wang X, Shang XM, Li L, Ma Y, Zhao
GY, Song YX, Geng XB, Zhao BQ, Tian MR, et al: lncRNA 430945
promotes the proliferation and migration of vascular smooth muscle
cells via the ROR2/RhoA signaling pathway in atherosclerosis. Mol
Med Rep. 19:4663–4672. 2019.PubMed/NCBI View Article : Google Scholar
|
|
30
|
Yu MH, Lin MC, Huang CN, Chan KC and Wang
CJ: Acarbose inhibits the proliferation and migration of vascular
smooth muscle cells via targeting Ras signaling. Vascul Pharmacol.
103-105:8–15. 2018. View Article : Google Scholar
|
|
31
|
Jain T, Nikolopoulou EA, Xu Q and Qu A:
Hypoxia inducible factor as a therapeutic target for
atherosclerosis. Pharmacol Ther. 183:22–33. 2018.PubMed/NCBI View Article : Google Scholar
|
|
32
|
Tanaka T and Eckardt KU: HIF activation
against CVD in CKD: Novel treatment opportunities. Semin Nephrol.
38:267–276. 2018.PubMed/NCBI View Article : Google Scholar
|
|
33
|
Feng S, Bowden N, Fragiadaki M, Souilhol
C, Hsiao S, Mahmoud M, Allen S, Pirri D, Ayllon BT, Akhtar S, et
al: Mechanical activation of hypoxia-inducible factor 1α drives
endothelial dysfunction at atheroprone sites. Arterioscler Thromb
Vasc Biol. 37:2087–2101. 2017.PubMed/NCBI View Article : Google Scholar
|
|
34
|
Chen R, Xiong S, Yang Y, Fu W, Wang Y and
Ge J: The relationship between human cytomegalovirus infection and
atherosclerosis development. Mol Cell Biochem. 249:91–96.
2003.PubMed/NCBI
|
|
35
|
Perng YC, Campbell JA, Lenschow DJ and Yu
D: Human cytomegalovirus pUL79 is an elongation factor of RNA
polymerase II for viral gene transcription. PLoS Pathog.
10(e1004350)2014.PubMed/NCBI View Article : Google Scholar
|
|
36
|
Tabaei S and Tabaee SS: DNA methylation
abnormalities in atherosclerosis. Artif Cell Nanomed Biotechnol.
47:2031–2041. 2019.PubMed/NCBI View Article : Google Scholar
|
|
37
|
Jiang D, Sun M, You L, Lu K, Gao L, Hu C,
Wu S, Chang G, Tao H and Zhang D: DNA methylation and
hydroxymethylation are associated with the degree of coronary
atherosclerosis in elderly patients with coronary heart disease.
Life Sci. 224:241–248. 2019.PubMed/NCBI View Article : Google Scholar
|
|
38
|
Aavik E, Babu M and Ylä-Herttula S: DNA
methylation processes in atheosclerotic plaque. Atherosclerosis.
281:168–179. 2019.PubMed/NCBI View Article : Google Scholar
|
|
39
|
Sayols-Baixeras S, Hernáez A, Subirana I,
Lluis-Ganella C, Muñoz D, Fitó M, Marrugat J and Elosua R: DNA
methylation and high-density lipoprotein functionality - brief
report: The REGICOR study (Registre Gironi del Cor). Arterioscler
Thromb Vasc Biol. 37:567–569. 2017.PubMed/NCBI View Article : Google Scholar
|
|
40
|
Balakrishnan A, Guruprasad KP,
Satyamoorthy K and Joshi MB: Interleukin-6 determines protein
stabilization of DNA methyltransferases and alters DNA promoter
methylation of genes associated with insulin signaling and
angiogenesis. Lab Invest. 98:1143–1158. 2018.PubMed/NCBI View Article : Google Scholar
|
|
41
|
Nazarenko MS, Markov AV, Lebedev IN,
Sleptsov AA, Frolov AV, Barbash OL and Puzyrev VP: DNA methylation
profiling of the vascular tissues in the setting of
atherosclerosis. Mol Biol (Mosk). 47:398–404. 2013.PubMed/NCBI View Article : Google Scholar : (In Russian).
|
|
42
|
Nazarenko MS, Markov AV, Lebedev IN,
Freidin MB, Sleptcov AA, Koroleva IA, Frolov AV, Popov VA,
Barbarash OL and Puzyrev VP: A comparison of genome-wide DNA
methylation patterns between different vascular tissues from
patients with coronary heart disease. PLoS One.
10(e0122601)2015.PubMed/NCBI View Article : Google Scholar
|
|
43
|
Riffo-Campos AL, Fuentes-Trillo A, Tang
WY, Soriano Z, De Marco G, Rentero-Garrido P, Adam-Felici V,
Lendinez- Tortajada V, Francesconi K and Goessler W: In silico
epigenetics of metal exposure and subclinical atherosclerosis in
middle aged men: Pilot results from the Aragon Workers Health
Study. Philos Trans R Soc Lond B Biol Sci. 373(1748)2018.PubMed/NCBI View Article : Google Scholar
|
