|
1
|
Resnikoff S and Keys TU: Future trends in
global blindness. Indian J Ophthalmol. 60:387–395. 2012. View Article : Google Scholar : PubMed/NCBI
|
|
2
|
Pescosolido N, Barbato A, Giannotti R,
Komaiha C and Lenarduzzi F: Age-related changes in the kinetics of
human lenses: Prevention of the cataract. Int J Ophthalmol.
9:1506–1517. 2016.PubMed/NCBI
|
|
3
|
Hammond CJ, Duncan DD, Snieder H, de Lange
M, West SK, Spector TD and Gilbert CE: The heritability of
age-related cortical cataract: The twin eye study. Invest
Ophthalmol Vis Sci. 42:601–605. 2001.PubMed/NCBI
|
|
4
|
Tsai SY, Hsu WM, Cheng CY, Liu JH and Chou
P: Epidemiologic study of age-related cataracts among an elderly
Chinese population in Shih-Pai, Taiwan. Ophthalmology.
110:1089–1095. 2003. View Article : Google Scholar : PubMed/NCBI
|
|
5
|
Sheng Y, He F, Lin JF, Shen W and Qiu YW:
Tea and risk of age-related cataracts: A cross-sectional study in
Zhejiang Province, China. J Epidemiol. 26:587–592. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
6
|
Chen W, Lin H, Zhong X, Liu Z, Geng Y, Xie
C and Chen W: Discrepant expression of cytokines in inflammation-
and age-related cataract patients. PloS One. 9:e1096472014.
View Article : Google Scholar : PubMed/NCBI
|
|
7
|
Hwang HB, Yim HB, Cho YK and Choi JA: The
Association Between Aqueous Connective Tissue growth Factor and the
Severity of Age-related Cataracts as Graded by the Lens Opacities
Classification System III. Curr Eye Res. 41:350–356. 2016.
View Article : Google Scholar
|
|
8
|
Wilusz JE, Sunwoo H and Spector DL: Long
noncoding RNAs: Functional surprises from the RNA world. Genes Dev.
23:1494–1504. 2009. View Article : Google Scholar : PubMed/NCBI
|
|
9
|
Yan B, Tao ZF, Li XM, Zhang H, Yao J and
Jiang Q: Aberrant expression of long noncoding RNAs in early
diabetic retinopathy. Invest Ophthalmol Vis Sci. 55:941–951. 2014.
View Article : Google Scholar : PubMed/NCBI
|
|
10
|
Kung JT, Colognori D and Lee JT: Long
noncoding RNAs: Past, present, and future. Genetics. 193:651–669.
2013. View Article : Google Scholar : PubMed/NCBI
|
|
11
|
Li J, Xuan Z and Liu C: Long non-coding
RNAs and complex human diseases. Int J Mol Sci. 14:18790–18808.
2013. View Article : Google Scholar : PubMed/NCBI
|
|
12
|
Uchida S and Dimmeler S: Long noncoding
RNAs in cardiovascular diseases. Circ Res. 116:737–750. 2015.
View Article : Google Scholar : PubMed/NCBI
|
|
13
|
Zhao Q, Li T, Qi J, Liu J and Qin C: The
miR-545/374a cluster encoded in the Ftx lncRNA is overexpressed in
HBV-related hepatocellular carcinoma and promotes tumorigenesis and
tumor progression. PloS One. 9:e1097822014. View Article : Google Scholar : PubMed/NCBI
|
|
14
|
Roberts TC, Morris KV and Wood MJ: The
role of long non-coding RNAs in neurodevelopment, brain function
and neurological disease. Philos Trans R Soc Lond B Biol Sci.
369:pii: 20130507. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
15
|
Meola N, Pizzo M, Alfano G, Surace EM and
Banfi S: The long noncoding RNA Vax2os1 controls the cell cycle
progression of photoreceptor progenitors in the mouse retina. RNA.
18:111–123. 2012. View Article : Google Scholar :
|
|
16
|
Shen Y, Dong LF, Zhou RM, Yao J, Song YC,
Yang H, Jiang Q and Yan B: Role of long non-coding RNA MIAT in
proliferation, apoptosis and migration of lens epithelial cells: A
clinical and in vitro study. J Cell Mol Med. 20:537–548. 2016.
View Article : Google Scholar : PubMed/NCBI
|
|
17
|
Yao J, Wang XQ, Li YJ, Shan K, Yang H,
Wang YN, Yao MD, Liu C, Li XM, Shen Y, et al: Long non-coding RNA
MALAT1 regulates retinal neurodegeneration through CREB signaling.
EMBO Mol Med. 8:346–362. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
18
|
Chylack LT Jr, Leske MC, McCarthy D, Khu
P, Kashiwagi T and Sperduto R: Lens opacities classification system
II (LOCS II). Arch Ophthalmol. 107:991–997. 1989. View Article : Google Scholar : PubMed/NCBI
|
|
19
|
Kissopoulou A, Jonasson J, Lindahl TL and
Osman A: Next generation sequencing analysis of human platelet
PolyA+ mRNAs and rRNA-depleted total RNA. PLoS One.
8:e818092013. View Article : Google Scholar
|
|
20
|
Lin Y, Golovnina K, Chen ZX, Lee HN,
Negron YL, Sultana H, Oliver B and Harbison ST: Comparison of
normalization and differential expression analyses using RNA-Seq
data from 726 individual Drosophila melanogaster. BMC Genomics.
17:282016. View Article : Google Scholar : PubMed/NCBI
|
|
21
|
Zhang ZH, Jhaveri DJ, Marshall VM, Bauer
DC, Edson J, Narayanan RK, Robinson GJ, Lundberg AE, Bartlett PF,
Wray NR, et al: A comparative study of techniques for differential
expression analysis on RNA-Seq data. PLoS One. 9:e1032072014.
View Article : Google Scholar : PubMed/NCBI
|
|
22
|
Wu Z, Fu Y, Cao J, Yu M, Tang X and Zhao
S: Identification of differentially expressed miRNAs between white
and black hair follicles by RNA-sequencing in the goat (Capra
hircus). Int J Mol Sci. 15:9531–9545. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
23
|
Shah DH: RNA sequencing reveals
differences between the global transcriptomes of Salmonella
enterica serovar enteritidis strains with high and low
pathogenicities. Appl Environ Microbiol. 80:896–906. 2014.
View Article : Google Scholar :
|
|
24
|
Huang S, Feng C, Chen L, Huang Z, Zhou X,
Li B, Wang LL, Chen W, Lv FQ and Li TS: Identification of potential
key long non-coding RNAs and target genes associated with pneumonia
using long non-coding RNA sequencing (lncRNA-Seq): A preliminary
study. Med Sci Monit. 22:3394–3408. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
25
|
Wainberg M, Alipanahi B and Frey B: Does
conservation account for splicing patterns? BMC Genomics.
17:7872016. View Article : Google Scholar : PubMed/NCBI
|
|
26
|
Huang CH, Wang YT, Tsai CF, Chen YJ, Lee
JS and Chiou SH: Phosphoproteomics characterization of novel
phosphorylated sites of lens proteins from normal and cataractous
human eye lenses. Mol Vis. 17:186–198. 2011.PubMed/NCBI
|
|
27
|
Livak KJ and Schmittgen TD: Analysis of
relative gene expression data using real-time quantitative PCR and
the 2(−Delta Delta C(T)) Method. Methods. 25:402–408. 2001.
View Article : Google Scholar
|
|
28
|
Finotello F and Di Camillo B: Measuring
differential gene expression with RNA-seq: challenges and
strategies for data analysis. Brief Funct Genomics. 14:130–142.
2015. View Article : Google Scholar
|
|
29
|
Kumar R, Ichihashi Y, Kimura S, Chitwood
DH, Headland LR, Peng J, Maloof JN and Sinha NR: A High-Throughput
Method for Illumina RNA-Seq Library Preparation. Front Plant Sci.
3:2022012. View Article : Google Scholar : PubMed/NCBI
|
|
30
|
Yu J, He K, Ren T, Lou Y and Zhao A:
High-throughput sequencing reveals differential expression of
miRNAs in prehierarchal follicles of laying and brooding geese.
Physiol Genomics. 48:455–463. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
31
|
Trapnell C, Pachter L and Salzberg SL:
TopHat: Discovering splice junctions with RNA-Seq. Bioinformatics.
25:1105–1111. 2009. View Article : Google Scholar : PubMed/NCBI
|
|
32
|
Langmead B, Trapnell C, Pop M and Salzberg
SL: Ultrafast and memory-efficient alignment of short DNA sequences
to the human genome. Genome Biol. 10:R252009. View Article : Google Scholar : PubMed/NCBI
|
|
33
|
Wagner GP, Kin K and Lynch VJ: Measurement
of mRNA abundance using RNA-seq data: RPKM measure is inconsistent
among samples. Theory Biosci. 131:281–285. 2012. View Article : Google Scholar : PubMed/NCBI
|
|
34
|
Chen X and Yan GY: Novel human
lncRNA-disease association inference based on lncRNA expression
profiles. Bioinformatics. 29:2617–2624. 2013. View Article : Google Scholar : PubMed/NCBI
|
|
35
|
Wang L, Feng Z, Wang X, Wang X and Zhang
X: DEGseq: An R package for identifying differentially expressed
genes from RNA-seq data. Bioinformatics. 26:136–138. 2010.
View Article : Google Scholar
|
|
36
|
Panda AK, Nandi SK, Chakraborty A, Nagaraj
RH and Biswas A: Differential role of arginine mutations on the
structure and functions of alpha-crystallin. Biochim Biophys Acta.
1860:199–210. 2016. View Article : Google Scholar
|
|
37
|
Antosova B, Smolikova J, Borkovcova R,
Strnad H, Lachova J, Machon O and Kozmik Z: Ectopic activation of
Wnt/beta-catenin signaling in lens fiber cells results in cataract
formation and aberrant fiber cell differentiation. PloS One.
8:e782792013. View Article : Google Scholar
|
|
38
|
Li Y, Jia Y, Zhou J and Huang K: Effect of
methionine sulfoxide reductase B1 silencing on high-glucose-induced
apoptosis of human lens epithelial cells. Life Sci. 92:193–201.
2013. View Article : Google Scholar
|
|
39
|
Linetsky M, Raghavan CT, Johar K, Fan X,
Monnier VM, Vasavada AR and Nagaraj RH: UVA light-excited
kynurenines oxidize ascorbate and modify lens proteins through the
formation of advanced glycation end products: implications for
human lens aging and cataract formation. J Biol Chem.
289:17111–17123. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
40
|
Staniszewska MM and Nagaraj RH:
3-hydroxykynurenine-mediated modification of human lens proteins:
structure determination of a major modification using a monoclonal
antibody. J Biol Chem. 280:22154–22164. 2005. View Article : Google Scholar : PubMed/NCBI
|
|
41
|
Ipson BR and Fisher AL: Roles of the
tyrosine isomers meta-tyrosine and ortho-tyrosine in oxidative
stress. Ageing Res Rev. 27:93–107. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
42
|
Srivastava SK and Beutler E: Cataract
produced by tyrosinase and tyrosine systems in rabbitens in vitro.
Biochem J. 112:421–425. 1969. View Article : Google Scholar : PubMed/NCBI
|
|
43
|
Liu X, Zhou P, Fan F, Li D, Wu J, Lu Y and
Luo Y: CpG site methylation in CRYAA promoter affect transcription
factor Sp1 binding in human lens epithelial cells. BMC Ophthalmol.
16:1412016. View Article : Google Scholar : PubMed/NCBI
|
|
44
|
Yang J, Zhou S, Guo M, Li Y and Gu J:
Different alpha crystallin expression in human age-related and
congenital cataract lens epithelium. BMC Ophthalmol. 16:672016.
View Article : Google Scholar : PubMed/NCBI
|
|
45
|
Zhou Z, Wang B, Luo Y, Zhou G, Hu S, Zhang
H, Ma X and Qi Y: Major intrinsic protein (MIP) polymorphism is
associated with age-related cataract in Chinese. Mol Vis.
17:2292–2296. 2011.PubMed/NCBI
|
|
46
|
Takemoto L and Sorensen CM:
Protein-protein interactions and lens transparency. Exp Eye Res.
87:496–501. 2008. View Article : Google Scholar : PubMed/NCBI
|
|
47
|
Ma X, Jiao X, Ma Z and Hejtmancik JF:
Polymorphism rs7278468 is associated with Age-related cataract
through decreasing transcriptional activity of the CRYAA promoter.
Sci Rep. 6:232062016. View Article : Google Scholar : PubMed/NCBI
|
|
48
|
Bhagyalaxmi SG, Srinivas P, Barton KA,
Kumar KR, Vidyavathi M, Petrash JM, Reddy GB and Padma T: A novel
mutation (F71L) in αA-crystallin associated with age-related
cataract results in defective chaperone-like function despite
unaltered structure. Biochim Biophys Acta. 1792:974–981. 2009.
View Article : Google Scholar : PubMed/NCBI
|
|
49
|
Hubmacher D, Reinhardt DP, Plesec T,
Schenke-Layland K and Apte SS: Human eye development is
characterized by coordinated expression of fibrillin isoforms.
Invest Ophthalmol Vis Sci. 55:7934–7944. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
50
|
Saika S, Miyamoto T, Tanaka T, Ishida I,
Ohnishi Y and Ooshima A: Latent TGFbeta binding protein-1 and
fibrillin-1 in human capsular opacification and in cultured lens
epithelial cells. Br J Ophthalmol. 85:1362–1366. 2001. View Article : Google Scholar : PubMed/NCBI
|
|
51
|
Ning S, Gao Y, Wang P, Li X, Zhi H, Zhang
Y, Liu Y, Zhang J, Guo M, Han D, et al: Construction of a
lncRNA-mediated feed-forward loop network reveals global
topological features and prognostic motifs in human cancers.
Oncotarget. 7:45937–45947. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
52
|
Xu J, Feng L, Han Z, Li Y, Wu A, Shao T,
Ding N, Li L, Deng W, Di X, et al: Extensive ceRNA-ceRNA
interaction networks mediated by miRNAs regulate development in
multiple rhesus tissues. Nucleic Acids Res. 44:9438–9451.
2016.PubMed/NCBI
|
|
53
|
Marques AC and Ponting CP: Catalogues of
mammalian long noncoding RNAs: Modest conservation and
incompleteness. Genome Biol. 10:R1242009. View Article : Google Scholar : PubMed/NCBI
|
|
54
|
Wu C, Lin H, Wang Q, Chen W, Luo H, Chen W
and Zhang H: Discrepant expression of microRNAs in transparent and
cataractous human lenses. Invest Ophthalmol Vis Sci. 53:3906–3912.
2012. View Article : Google Scholar : PubMed/NCBI
|
|
55
|
McLaughlin PA, Nirmalan GP, Tam KH and
Robinson GA: Release of 131I from the ovary of the laying Japanese
quail after injection of perchlorate, thiocyanate or iodide. J
Endocrinol. 63:337–342. 1974. View Article : Google Scholar : PubMed/NCBI
|
|
56
|
McIllmurray MB, Price MR and Langman MJ:
Inhibition of leucocyte migration in patients with large intestinal
cancer by extracts prepared from large intestinal tumours and from
normal colonic mucosa. Br J Cancer. 29:305–311. 1974. View Article : Google Scholar : PubMed/NCBI
|
|
57
|
Young TL, Matsuda T and Cepko CL: The
noncoding RNA taurine upregulated gene 1 is required for
differentiation of the murine retina. Curr Biol. 15:501–512. 2005.
View Article : Google Scholar : PubMed/NCBI
|
|
58
|
Cumming GR, Dufresne C, Kich L and Samm J:
Exercise electrocardiogram patterns in normal women. Br Heart J.
35:1055–1061. 1973. View Article : Google Scholar : PubMed/NCBI
|
|
59
|
Gosak M, Markovič R, Fajmut A, Marhl M,
Hawlina M and Andjelić S: The analysis of intracellular and
intercellular calcium signaling in human anterior lens capsule
epithelial cells with regard to different types and stages of the
cataract. PLoS One. 10:e01437812015. View Article : Google Scholar : PubMed/NCBI
|
|
60
|
Schmitz SU, Grote P and Herrmann BG:
Mechanisms of long noncoding RNA function in development and
disease. Cell Mol Life Sci. 73:2491–2509. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
61
|
Sundararajan M, Thomas PA, Teresa PA,
Anbukkarasi M and Geraldine P: Regulatory effect of chrysin on
expression of lenticular calcium transporters, calpains, and
apoptotic-cascade components in selenite-induced cataract. Mol
Vision. 22:401–423. 2016.
|
|
62
|
Cekic O: Copper, lead, cadmium and calcium
in cataractous lenses. Ophthalmic Res. 30:49–53. 1998. View Article : Google Scholar : PubMed/NCBI
|
|
63
|
Fischer RS, Lee A and Fowler VM:
Tropomodulin and tropomyosin mediate lens cell actin cytoskeleton
reorganization in vitro. Invest Ophthalmol Vis Sci. 41:166–174.
2000.PubMed/NCBI
|
|
64
|
Zhou CJ and Lo WK: Association of
clathrin, AP-2 adaptor and actin cytoskeleton with developing
interlocking membrane domains of lens fibre cells. Exp Eye Res.
77:423–432. 2003. View Article : Google Scholar : PubMed/NCBI
|
|
65
|
Gostishchev VK and Khokhlov AM:
Pathogenesis of trophic ulcers in varicose veins of the lower
extremities. Khirurgiia (Mosk). 10:100–105. 1991.
|
