|
1.
|
De Bernardi B, Nicolas B, Boni L, Indolfi
P, Carli M, Cordero Di, Montezemolo L, Donfrancesco A, Pession A,
Provenzi M, di Cataldo A, Rizzo A, Tonini GP, Dallorso S, Conte M,
Gambini C, Garaventa A, Bonetti F, Zanazzo A, D’Angelo P and Bruzzi
P: Disseminated neuroblastoma in children older than one year at
diagnosis: comparable results with three consecutive high-dose
protocols adapted by the Italian Co-Operative Group for
Neurobalstoma. J Clin Oncol. 21:1592–1601. 2003.
|
|
2.
|
Matthay KK, Villablanca JG, Seeger RC,
Stram DO, Harris RE, Ramsay NK, Swift P, Shimada H, Black CT,
Brodeur GM, Gerbing RB and Reynolds CP: Treatment of high-risk
neuroblsatoma with intensive chemotherapy, radiotherapy, autologous
bone marrow transplantation, and 13-cis-retinoic acid. Children’s
Cancer Group N Engl J Med. 341:1165–1173. 1999.PubMed/NCBI
|
|
3.
|
Wang H, Lee S, Nigro CL, Lattanzio L,
Merlano M, Monteverde M, Matin R, Purdie K, Mladkova N, Bergamaschi
D, Harwood C, Syed N, Szlosarek P, Briasoulis E, McHugh A, Thompson
A, Evans A, Leigh I, Fleming C, Inman GJ, Hatzimichael E, Proby C
and Crook T: NT5E (CD73) is epigenetically regulated in malignant
melanoma and associated with metastatic site specificity. Br J
Cancer. 106:1446–1452. 2012. View Article : Google Scholar : PubMed/NCBI
|
|
4.
|
Geiman TM and Muegge K: DNA methylation in
early development. Mol Reprod Dev. 77:105–113. 2010.
|
|
5.
|
Bird A: DNA methylation patterns and
epigenetic memory. Genes Dev. 16:6–21. 2002. View Article : Google Scholar
|
|
6.
|
Weber M, Hellmann I, Stadler MB, Ramos L,
Pääbo S, Rebhan M and Schübeler D: Distribution, silencing
potential and evolutionary impact of promoter DNA methylation in
the human genome. Nat Genet. 39:457–466. 2007. View Article : Google Scholar : PubMed/NCBI
|
|
7.
|
Song F, Smith JF, Kimura MT, Morrow AD,
Matsuyama T, Nagase H and Held WA: Association of tissue-specific
differentially methylated regions (TDMs) with differential gene
expression. Proc Natl Acad Sci USA. 102:3336–3341. 2005. View Article : Google Scholar : PubMed/NCBI
|
|
8.
|
Eckhardt F, Lewin J, Cortese R, Rakyan VK,
Attwood J, Burger M, Burton J, Cox TV, Davies R, Down TA, Haefliger
C, Horton R, Howe K, Jackson DK, Kunde J, Koenig C, Liddle J,
Niblett D, Otto T, Pettett R, Seemann S, Thompson C, West T, Rogers
J, Olek A, Berlin K and Beck S: DNA methylation profiling of human
chromosomes 6, 20 and 22. Nat Genet. 38:1378–1385. 2006. View Article : Google Scholar : PubMed/NCBI
|
|
9.
|
Zhao Y and Bruemmer D: NR4A orphan nuclear
receptors: transcriptional regulators of gene expression in
metabolism and vascular biology. Arterioscler Thromb Vasc Biol.
30:1535–1541. 2010. View Article : Google Scholar : PubMed/NCBI
|
|
10.
|
Maxwell MA and Muscat GE: The NR4A
subgroup: immediate early response genes with pleiotropic
physiological roles. Nucl Recept Signal. 4:e0022006. View Article : Google Scholar : PubMed/NCBI
|
|
11.
|
Song F, Mahmood S, Ghosh S, Liang P,
Smiraglia DJ, Nagase H and Held WA: Tissue specific differentially
methylated regions (TDMR): Changes in DNA methylation during
development. Genomics. 93:130–139. 2009. View Article : Google Scholar : PubMed/NCBI
|
|
12.
|
Li LC and Dahiya R: MethPrimer: designing
primers for methylation PCRs. Bioinformatics. 18:1427–1431. 2002.
View Article : Google Scholar : PubMed/NCBI
|
|
13.
|
Ehrich M, Nelson MR, Stanssens P, Zabeau
M, Liloglou T, Xinarianos G, Cantor CR, Field JK and van den Boom
D: Quantitative high-throughput analysis of DNA methylation
patterns by base-specific cleavage and mass spectrometry. Proc Natl
Acad Sci USA. 102:15785–15790. 2005. View Article : Google Scholar : PubMed/NCBI
|
|
14.
|
Fatemi M, Pao MM, Jeong S, Gal-Yam EN,
Egger G, Weisenberger DJ and Jones PA: Footprinting of mammalian
promoters: use of a CpG DNA mehtyltransferase revealing nucreosome
positions at a single molecule level. Nucleic Acids Res.
33:e1762005. View Article : Google Scholar : PubMed/NCBI
|
|
15.
|
Baxter EW, Cummings WJ and Fournier REK:
Formation of a large, complex domain of histone hyperacetylation at
human 14q32.1 requires the serpin locus control region. Nucleic
Acids Res. 33:3313–3322. 2005. View Article : Google Scholar : PubMed/NCBI
|
|
16.
|
Orlando V, Strutt H and Paro R: Analysis
of chromatin structure by in vivo formaldehyde cross-linking.
Methods. 11:205–214. 1997. View Article : Google Scholar : PubMed/NCBI
|
|
17.
|
Bowers SR, Mirabella F, Calero-Nieto FJ,
Valeaux S, Hadjur S, Baxter EW, Merkenschlager M and Cockerill PN:
A conserved insulator that recruits CTCF and cohesin exists between
the closely related but divergently regulated interleukin-3 and
granulocyte-macrophage colony-stimulating factor genes. Mol Cell
Biol. 29:1682–1693. 2009. View Article : Google Scholar
|
|
18.
|
Ishihara K, Oshimura M and Nakao M:
CTCF-dependent chromatin insulator is linked to epigenetic
remodeling. Mol Cell. 23:733–742. 2006. View Article : Google Scholar : PubMed/NCBI
|
|
19.
|
Akoben AK: Understanding diagnostic tests
3: Receiver operating characteristic curves. Acta Paediatr.
96:644–647. 2007. View Article : Google Scholar : PubMed/NCBI
|
|
20.
|
Egger G, Liang G, Aparicio A and Jones PA:
Epigenetics in human disease and prospects for epigenetic therapy.
Nature. 27:457–463. 2004. View Article : Google Scholar
|
|
21.
|
Laird PW: Cancer epigenetics. Hum Mol
Genet. 15:65–76. 2005. View Article : Google Scholar
|
|
22.
|
Gonzalez-Gomez P, Bello MJ, Lomas J,
Arjona D, Alonso ME, Amiñoso C, Lopez-Marin I, Anselmo NP, Sarasa
JL, Gutierrez M, Casartelli C and Rey JA: Aberrant methylation of
multiple genes in neuroblastic tumours. relationship with MYCN
amplification and allelic status at 1p. Eur J Cancer. 39:1478–1485.
2003. View Article : Google Scholar : PubMed/NCBI
|
|
23.
|
Banelli B, Vinci AD, Gelvi I, Casciano I,
Allemanni G, Bonassi S and Romani M: DNA methylation in
neuroblastic tumors. Cancer Lett. 228:37–41. 2005. View Article : Google Scholar : PubMed/NCBI
|
|
24.
|
Kawashima H, Sugito K, Yoshizawa S, Uekusa
S, Furuya T, Ikeda T, Koshinaga T, Shinojima Y, Hasegawa R, Mishra
R, Igarashi J, Kimura M, Wang X, Fujiwara K, Gosh S and Nagase H:
DNA hypomethylation at the ZNF206-exon 5 CpG island associated with
neuronal differentiation in mice and development of neuroblastoma
in humans. Int J Oncol. 40:31–39. 2012.PubMed/NCBI
|
|
25.
|
Zetterström RH, Williams R, Perlmann T and
Olson L: Cellular expression of the immediate early transcription
factors Nurr1 and NGFI-B suggests a gene regulatory role in several
brain regions including the nigrostriatal dopamine system. Brain
Res Mol Brain Res. 5:111–120. 1996.
|
|
26.
|
Ohkura N, Ito M, Tsukada T, Sasaki K,
Yamaguchi K and Miki K: Structure, mapping and expression of a
human NOR-1 gene, the third member of the Nur77/NGFI-B family.
Biochim Biophys Acta. 1308:205–214. 1996. View Article : Google Scholar : PubMed/NCBI
|
|
27.
|
Eells JB, Wilcots J, Sisk S and Guo-Ross
SX: NR4A gene expression is dynamically regulated in the ventral
tegmental area dopamine neurons and is related to expression of
dopamine neurotransmission genes. J Mol Neurosci. 46:545–553. 2012.
View Article : Google Scholar
|
|
28.
|
Werme M, Ringholm A, Olson L and Brené S:
Differential patterns of induction of NGFI-B, Nor1 and c-fos mRNAs
in striatal subregions by haloperidol and clozapine. Brain Res.
863:112–119. 2000. View Article : Google Scholar : PubMed/NCBI
|
|
29.
|
Boldingh Debernard KA, Mathisen GH and
Paulsen RE: Differences in NGFI-B, Nurr1, and NOR-1 expression and
nucleocytoplasmic translocation in glutamate-treated neurons.
Neurochem Int. 61:79–88. 2012.PubMed/NCBI
|
|
30.
|
Wendt KS, Yoshida K, Itoh T, Bando M, Koch
B, Schirghuber E, Tsutsumi S, Nagae G, Ishihara K, Mishiro T,
Yahata K, Imamoto F, Aburatani H, Nakao M, Imamoto N, Maeshima K,
Shirahige K and Peters JM: Cohesin mediates transcriptional
insulation by CCCTC-binding factor. Nature. 451:796–801. 2008.
View Article : Google Scholar : PubMed/NCBI
|
|
31.
|
Phillips JE and Corces VG: CTCF: master
weaver of the genome. Cell. 137:1194–1211. 2009. View Article : Google Scholar : PubMed/NCBI
|
