|
1
|
Bray F, Ferlay J, Soerjomataram I, Siegel
RL, Torre LA and Jemal A: Global cancer statistics 2018: GLOBOCAN
estimates of incidence and mortality worldwide for 36 cancers in
185 countries. CA Cancer J Clin. 68:394–424. 2018. View Article : Google Scholar : PubMed/NCBI
|
|
2
|
Calderaro J, Couchy G, Imbeaud S, Amaddeo
G, Letouzé E, Blanc JF, Laurent C, Hajji Y, Azoulay D, Bioulac-Sage
P, et al: Histological subtypes of hepatocellular carcinoma are
related to gene mutations and molecular tumour classification. J
Hepatol. 67:727–738. 2017. View Article : Google Scholar : PubMed/NCBI
|
|
3
|
Ruiz de Galarreta M, Bresnahan E,
Molina-Sánchez P, Lindblad KE, Maier B, Sia D, Puigvehi M, Miguela
V, Casanova-Acebes M, Dhainaut M, et al: β-Catenin activation
promotes immune escape and resistance to Anti-PD-1 therapy in
hepatocellular carcinoma. Cancer Discov. 9:1124–1141. 2019.
View Article : Google Scholar : PubMed/NCBI
|
|
4
|
Chaudhary R and Lal A: Long noncoding RNAs
in the p53 network. Wiley Interdiscip Rev RNA. 8. pp.
10.1002/wrna.14102017, View Article : Google Scholar
|
|
5
|
Feng J, Yang G, Liu Y, Gao Y, Zhao M, Bu
Y, Yuan H, Yuan Y, Yun H, Sun M, et al: LncRNA PCNAP1 modulates
hepatitis B virus replication and enhances tumor growth of liver
cancer. Theranostics. 9:5227–5245. 2019. View Article : Google Scholar : PubMed/NCBI
|
|
6
|
Wang H, Ma P, Liu P, Guo D, Liu Z and
Zhang Z: lncRNA SNHG6 promotes hepatocellular carcinoma progression
by interacting with HNRNPL/PTBP1 to facilitate SETD7/LZTFL1 mRNA
destabilization. Cancer Lett. 520:121–131. 2021. View Article : Google Scholar : PubMed/NCBI
|
|
7
|
Ishibashi M, Kogo R, Shibata K, Sawada G,
Takahashi Y, Kurashige J, Akiyoshi S, Sasaki S, Iwaya T, Sudo T, et
al: Clinical significance of the expression of long non-coding RNA
HOTAIR in primary hepatocellular carcinoma. Oncol Rep. 29:946–950.
2013. View Article : Google Scholar : PubMed/NCBI
|
|
8
|
Wang C, Li Y, Yan S, Wang H, Shao X, Xiao
M, Yang B, Qin G, Kong R, Chen R and Zhang N: Interactome analysis
reveals that lncRNA HULC promotes aerobic glycolysis through LDHA
and PKM2. Nat Commun. 11:31622020. View Article : Google Scholar : PubMed/NCBI
|
|
9
|
Vishnubalaji R, Shaath H, Elango R and
Alajez NM: Noncoding RNAs as potential mediators of resistance to
cancer immunotherapy. Semin Cancer Biol. 65:65–79. 2020. View Article : Google Scholar
|
|
10
|
Tay Y, Rinn J and Pandolfi PP: The
multilayered complexity of ceRNA crosstalk and competition. Nature.
505:344–352. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
11
|
Lin X, Zhuang S, Chen X, Du J, Zhong L,
Ding J, Wang L, Yi J, Hu G, Tang G, et al: lncRNA ITGB8-AS1
functions as a ceRNA to promote colorectal cancer growth and
migration through integrin-mediated focal adhesion signaling. Mol
Ther. 30:688–702. 2022. View Article : Google Scholar
|
|
12
|
Jeggo PA, Pearl LH and Carr AM: DNA
repair, genome stability and cancer: A historical perspective. Nat
Rev Cancer. 16:35–42. 2016. View Article : Google Scholar
|
|
13
|
Moynahan ME and Jasin M: Mitotic
homologous recombination maintains genomic stability and suppresses
tumorigenesis. Nat Rev Mol Cell Biol. 11:196–207. 2010. View Article : Google Scholar : PubMed/NCBI
|
|
14
|
Wickramasinghe VO and Venkitaraman AR: RNA
processing and genome stability: Cause and consequence. Mol Cell.
61:496–505. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
15
|
Shen L, Wang Q, Liu R, Chen Z, Zhang X,
Zhou P and Wang Z: LncRNA lnc-RI regulates homologous recombination
repair of DNA double-strand breaks by stabilizing RAD51 mRNA as a
competitive endogenous RNA. Nucleic Acids Res. 46:717–729. 2018.
View Article : Google Scholar :
|
|
16
|
Munschauer M, Nguyen CT, Sirokman K,
Hartigan CR, Hogstrom L, Engreitz JM, Ulirsch JC, Fulco CP,
Subramanian V, Chen J, et al: The NORAD lncRNA assembles a
topoisomerase complex critical for genome stability. Nature.
561:132–136. 2018. View Article : Google Scholar : PubMed/NCBI
|
|
17
|
Lee S, Kopp F, Chang TC, Sataluri A, Chen
B, Sivakumar S, Yu H, Xie Y and Mendell JT: Noncoding RNA NORAD
regulates genomic stability by sequestering PUMILIO Proteins. Cell.
164:69–80. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
18
|
López EH and Palumbi SR: Somatic mutations
and genome stability maintenance in clonal coral colonies. Mol Biol
Evol. 37:828–838. 2020. View Article : Google Scholar
|
|
19
|
Roessler S, Jia HL, Budhu A, Forgues M, Ye
QH, Lee JS, Thorgeirsson SS, Sun Z, Tang ZY, Qin LX and Wang XW: A
unique metastasis gene signature enables prediction of tumor
relapse in early-stage hepatocellular carcinoma patients. Cancer
Res. 70:10202–10212. 2010. View Article : Google Scholar : PubMed/NCBI
|
|
20
|
Grinchuk OV, Yenamandra SP, Iyer R, Singh
M, Lee HK, Lim KH, Chow PK and Kuznetsov VA: Tumor-adjacent tissue
co-expression profile analysis reveals pro-oncogenic ribosomal gene
signature for prognosis of resectable hepatocellular carcinoma. Mol
Oncol. 12:89–113. 2018. View Article : Google Scholar
|
|
21
|
Chen X, Ma W, Yao Y, Zhang Q, Li J, Wu X,
Mei C, Jiang X, Chen Y, Wang G, et al: Serum deprivation-response
protein induces apoptosis in hepatocellular carcinoma through
ASK1-JNK/p38 MAPK pathways. Cell Death Dis. 12:4252021. View Article : Google Scholar : PubMed/NCBI
|
|
22
|
Livak KJ and Schmittgen TD: Analysis of
relative gene expression data using real-time quantitative PCR and
the 2(-Delta Delta C(T)) Method. Methods. 25:402–408. 2001.
View Article : Google Scholar
|
|
23
|
Xia P, Zhang H, Xu K, Jiang X, Gao M, Wang
G, Liu Y, Yao Y, Chen X, Ma W, et al: MYC-targeted WDR4 promotes
proliferation, metastasis, and sorafenib resistance by inducing
CCNB1 translation in hepatocellular carcinoma. Cell Death Dis.
12:6912021. View Article : Google Scholar : PubMed/NCBI
|
|
24
|
Cai J, Wang N, Lin G, Zhang H, Xie W,
Zhang Y and Xu N: MBNL2 Regulates DNA damage response via
stabilizing p21. Int J Mol Sci. 22:7832021. View Article : Google Scholar : PubMed/NCBI
|
|
25
|
Lord CJ and Ashworth A: The DNA damage
response and cancer therapy. Nature. 481:287–294. 2012. View Article : Google Scholar : PubMed/NCBI
|
|
26
|
Martincorena I and Campbell PJ: Somatic
mutation in cancer and normal cells. Science. 349:1483–1489. 2015.
View Article : Google Scholar : PubMed/NCBI
|
|
27
|
Al Zouabi L and Bardin AJ: Stem cell DNA
damage and genome mutation in the context of aging and cancer
initiation. Cold Spring Harb Perspect Biol. 12:a0362102020.
View Article : Google Scholar : PubMed/NCBI
|
|
28
|
Elguindy MM and Mendell JT: NORAD-induced
Pumilio phase separation is required for genome stability. Nature.
595:303–308. 2021. View Article : Google Scholar : PubMed/NCBI
|
|
29
|
Zhang Y, He Q, Hu Z, Feng Y, Fan L, Tang
Z, Yuan J, Shan W, Li C, Hu X, et al: Long noncoding RNA LINP1
regulates repair of DNA double-strand breaks in triple-negative
breast cancer. Nat Struct Mol Biol. 23:522–530. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
30
|
Hong J, Guo F, Lu SY, Shen C, Ma D, Zhang
X, Xie Y, Yan T, Yu T, Sun T, et al: F: Nucleatum targets lncRNA
ENO1-IT1 to promote glycolysis and oncogenesis in colorectal
cancer. Gut. 70:2123–2137. 2021. View Article : Google Scholar
|
|
31
|
Zhang M, Wang N, Song P, Fu Y, Ren Y, Li Z
and Wang J: LncRNA GATA3-AS1 facilitates tumour progression and
immune escape in triple-negative breast cancer through
destabilization of GATA3 but stabilization of PD-L1. Cell Prolif.
53:e128552020. View Article : Google Scholar : PubMed/NCBI
|
|
32
|
Yang J, Liu F, Wang Y, Qu L and Lin A:
LncRNAs in tumor metabolic reprogramming and immune
microenvironment remodeling. Cancer Lett. 543:2157982022.
View Article : Google Scholar : PubMed/NCBI
|
|
33
|
Chen S, Lee L, Naila T, Fishbain S, Wang
A, Tomkinson AE, Lees-Miller SP and He Y: Structural basis of
long-range to short-range synaptic transition in NHEJ. Nature.
593:294–298. 2021. View Article : Google Scholar : PubMed/NCBI
|
|
34
|
Hatchi E, Goehring L, Landini S,
Skourti-Stathaki K, DeConti DK, Abderazzaq FO, Banerjee P, Demers
TM, Wang YE, Quackenbush J and Livingston DM: BRCA1 and RNAi
factors promote repair mediated by small RNAs and PALB2-RAD52.
Nature. 591:665–670. 2021. View Article : Google Scholar : PubMed/NCBI
|
|
35
|
Feretzaki M, Pospisilova M, Valador
Fernandes R, Lunardi T, Krejci L and Lingner J: RAD51-dependent
recruitment of TERRA lncRNA to telomeres through R-loops. Nature.
587:303–308. 2020. View Article : Google Scholar : PubMed/NCBI
|
|
36
|
Kim S, Jin H, Seo HR, Lee HJ and Lee YS:
Regulating BRCA1 protein stability by cathepsin S-mediated
ubiquitin degradation. Cell Death Differ. 26:812–825. 2019.
View Article : Google Scholar :
|
|
37
|
Arnould C, Rocher V, Finoux AL, Clouaire
T, Li K, Zhou F, Caron P, Mangeot PE, Ricci EP, Mourad R, et al:
Loop extrusion as a mechanism for formation of DNA damage repair
foci. Nature. 590:660–665. 2021. View Article : Google Scholar : PubMed/NCBI
|
|
38
|
Hussain SP, Schwank J, Staib F, Wang XW
and Harris CC: TP53 mutations and hepatocellular carcinoma:
Insights into the etiology and pathogenesis of liver cancer.
Oncogene. 26:2166–2176. 2007. View Article : Google Scholar : PubMed/NCBI
|
|
39
|
Woo HG, Wang XW, Budhu A, Kim YH, Kwon SM,
Tang ZY, Sun Z, Harris CC and Thorgeirsson SS: Association of TP53
mutations with stem cell-like gene expression and survival of
patients with hepatocellular carcinoma. Gastroenterology.
140:1063–1070. 2011. View Article : Google Scholar
|
|
40
|
Lou Y, Yu Y, Xu X, Zhou S, Shen H, Fan T,
Wu D, Yin J and Li G: Long non-coding RNA LUCAT1 promotes
tumourigenesis by inhibiting ANXA2 phosphorylation in
hepatocellular carcinoma. J Cell Mol Med. 23:1873–1884. 2019.
View Article : Google Scholar
|
|
41
|
He H, Wang Y, Ye P, Yi D, Cheng Y, Tang H,
Zhu Z, Wang X and Jin S: Long noncoding RNA ZFPM2-AS1 acts as a
miRNA sponge and promotes cell invasion through regulation of
miR-139/GDF10 in hepatocellular carcinoma. J Exp Clin Cancer Res.
39:1592020. View Article : Google Scholar : PubMed/NCBI
|
|
42
|
Wang Y, Li W, Chen X, Li Y, Wen P and Xu
F: MIR210HG predicts poor prognosis and functions as an oncogenic
lncRNA in hepatocellular carcinoma. Biomed Pharmacother.
111:1297–1301. 2019. View Article : Google Scholar : PubMed/NCBI
|
|
43
|
Yoon JH, Abdelmohsen K and Gorospe M:
Posttranscriptional gene regulation by long noncoding RNA. J Mol
Biol. 425:3723–3730. 2013. View Article : Google Scholar
|
|
44
|
Chen S, Xie C and Hu X: lncRNA SNHG6
functions as a ceRNA to up-regulate c-Myc expression via sponging
let-7c-5p in hepatocellular carcinoma. Biochem Biophys Res Commun.
519:901–908. 2019. View Article : Google Scholar : PubMed/NCBI
|
|
45
|
Liu XH, Sun M, Nie FQ, Ge YB, Zhang EB,
Yin DD, Kong R, Xia R, Lu KH, Li JH, et al: Lnc RNA HOTAIR
functions as a competing endogenous RNA to regulate HER2 expression
by sponging miR-331-3p in gastric cancer. Mol Cancer. 13:922014.
View Article : Google Scholar : PubMed/NCBI
|
|
46
|
Zhao CC, Jiao Y, Zhang YY, Ning J, Zhang
YR, Xu J, Wei W and Kang-Sheng G: Lnc SMAD5-AS1 as ceRNA inhibit
proliferation of diffuse large B cell lymphoma via Wnt/β-catenin
pathway by sponging miR-135b-5p to elevate expression of APC. Cell
Death Dis. 10:2522019. View Article : Google Scholar
|
|
47
|
Ochi T, Blackford AN, Coates J, Jhujh S,
Mehmood S, Tamura N, Travers J, Wu Q, Draviam VM, Robinson CV, et
al: DNA repair. PAXX, a paralog of XRCC4 and XLF, interacts with Ku
to promote DNA double-strand break repair. Science. 347:185–188.
2015. View Article : Google Scholar : PubMed/NCBI
|
|
48
|
Gao Y, Ferguson DO, Xie W, Manis JP,
Sekiguchi J, Frank KM, Chaudhuri J, Horner J, DePinho RA and Alt
FW: Interplay of p53 and DNA-repair protein XRCC4 in tumorigenesis,
genomic stability and development. Nature. 404:897–900. 2000.
View Article : Google Scholar : PubMed/NCBI
|
|
49
|
Wen Y, Dai G, Wang L, Fu K and Zuo S:
Silencing of XRCC4 increases radiosensitivity of triple-negative
breast cancer cells. Biosci Rep. 39:BSR201808932019. View Article : Google Scholar : PubMed/NCBI
|
