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Differential expression profiles of long noncoding RNA and mRNA in colorectal cancer tissues from patients with lung metastasis

  • Authors:
    • Ruo Shu
    • Yu Xu
    • Yan Tian
    • Yujian Zeng
    • Liang Sun
    • Fangyou Gong
    • Yi Lei
    • Kunhua Wang
    • Huayou Luo
  • View Affiliations / Copyright

    Affiliations: Department of Gastrointestinal and Hernia Surgery, The First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan 650032, P.R. China, Kunming Engineering Technology Center of Digestive Disease, Kunming, Yunnan 650032, P.R. China
    Copyright: © Shu et al. This is an open access article distributed under the terms of Creative Commons Attribution License.
  • Pages: 5666-5675
    |
    Published online on: February 8, 2018
       https://doi.org/10.3892/mmr.2018.8576
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Abstract

Lungs are the most common extra‑abdominal site of metastasis of colorectal cancer (CRC), in which long noncoding RNA (lncRNA) may serve a role. In the present study, a high‑throughput microarray assay was performed to detect lncRNA expression and identify novel targets for further study of lung metastasis in CRC. In the CRC tissues from patients with lung metastasis, 7,632 lncRNA (3,574 upregulated and 4,058 downregulated) and 6,185 mRNA (3,394 upregulated and 2,791 downregulated) were detected to be differentially expressed with a fold change ≥2 and P<0.05 compared with the CRC tissues without metastasis. A total of six differentially regulated lncRNA were confirmed by reverse transcription‑quantitative polymerase chain reaction in 20 pairs of CRC samples. Furthermore, gene ontology and pathway analysis were conducted to predict the possible roles of the identified mRNA. The upregulated mRNA were associated with cell division (biological processes), protein kinase B binding (molecular functions) and cellular components. The downregulated mRNA were associated with cell adhesion, platelet‑derived growth factor binding and membrane components. Pathway analysis determined that the upregulated mRNA were associated with the Wnt signaling pathway in the CRC tissues from patients with lung metastasis, while the downregulated mRNA were associated with the phosphoinositide 3‑kinase/Akt signaling pathway. The results of the present study suggested that differentially expressed lncRNA may be associated with lung metastasis and may provide insights into the biology and prevention of lung metastasis.
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Copy and paste a formatted citation
Spandidos Publications style
Shu R, Xu Y, Tian Y, Zeng Y, Sun L, Gong F, Lei Y, Wang K and Luo H: Differential expression profiles of long noncoding RNA and mRNA in colorectal cancer tissues from patients with lung metastasis. Mol Med Rep 17: 5666-5675, 2018.
APA
Shu, R., Xu, Y., Tian, Y., Zeng, Y., Sun, L., Gong, F. ... Luo, H. (2018). Differential expression profiles of long noncoding RNA and mRNA in colorectal cancer tissues from patients with lung metastasis. Molecular Medicine Reports, 17, 5666-5675. https://doi.org/10.3892/mmr.2018.8576
MLA
Shu, R., Xu, Y., Tian, Y., Zeng, Y., Sun, L., Gong, F., Lei, Y., Wang, K., Luo, H."Differential expression profiles of long noncoding RNA and mRNA in colorectal cancer tissues from patients with lung metastasis". Molecular Medicine Reports 17.4 (2018): 5666-5675.
Chicago
Shu, R., Xu, Y., Tian, Y., Zeng, Y., Sun, L., Gong, F., Lei, Y., Wang, K., Luo, H."Differential expression profiles of long noncoding RNA and mRNA in colorectal cancer tissues from patients with lung metastasis". Molecular Medicine Reports 17, no. 4 (2018): 5666-5675. https://doi.org/10.3892/mmr.2018.8576
Copy and paste a formatted citation
x
Spandidos Publications style
Shu R, Xu Y, Tian Y, Zeng Y, Sun L, Gong F, Lei Y, Wang K and Luo H: Differential expression profiles of long noncoding RNA and mRNA in colorectal cancer tissues from patients with lung metastasis. Mol Med Rep 17: 5666-5675, 2018.
APA
Shu, R., Xu, Y., Tian, Y., Zeng, Y., Sun, L., Gong, F. ... Luo, H. (2018). Differential expression profiles of long noncoding RNA and mRNA in colorectal cancer tissues from patients with lung metastasis. Molecular Medicine Reports, 17, 5666-5675. https://doi.org/10.3892/mmr.2018.8576
MLA
Shu, R., Xu, Y., Tian, Y., Zeng, Y., Sun, L., Gong, F., Lei, Y., Wang, K., Luo, H."Differential expression profiles of long noncoding RNA and mRNA in colorectal cancer tissues from patients with lung metastasis". Molecular Medicine Reports 17.4 (2018): 5666-5675.
Chicago
Shu, R., Xu, Y., Tian, Y., Zeng, Y., Sun, L., Gong, F., Lei, Y., Wang, K., Luo, H."Differential expression profiles of long noncoding RNA and mRNA in colorectal cancer tissues from patients with lung metastasis". Molecular Medicine Reports 17, no. 4 (2018): 5666-5675. https://doi.org/10.3892/mmr.2018.8576
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