MESP1 loss‑of‑function mutation contributes to double outlet right ventricle
- Authors:
- Published online on: June 29, 2017 https://doi.org/10.3892/mmr.2017.6875
- Pages: 2747-2754
Abstract
Introduction
Congenital heart disease (CHD), which commonly refers to a developmental abnormality in the structure of the heart or intrathoracic great blood vessel, is the most common type of birth defect in humans, accounting for one-third of all major congenital malformations worldwide (1). There are 1.35 million neonates born with CHD worldwide every year, with a global incidence of ~1% in live births and as high as 10% in early miscarriages (1–3). At present, CHD remains the leading noninfectious cause of infant morbidity and mortality, and is estimated to account for ~27% of all birth defect-associated cases of mortality (2). Despite the high prevalence and important clinical significance, the causes of CHD remain largely unclear.
The heart is the first functional organ to develop during vertebrate embryogenesis (4). The development of the cardiovascular system is a complex biological process that involves cell proliferation, differentiation, polarization and migration, and is extremely sensitive to environmental and genetic risk factors (4,5). Errors during the process of cardiovascular morphogenesis may result in a broad spectrum of congenital cardiovascular anomalies, including ventricular septal defect (VSD), atrial septal defect, tetralogy of Fallot, double outlet right ventricle (DORV), transposition of the great arteries and endocardial cushion defect (6–8). Although there are nongenetic risk factors associated with CHD, including parental characteristics and conditions, maternal drug use in the first trimester of pregnancy, and long-term exposure to toxicants and ionizing radiation (9), an increasing body of evidence in the field of human genetics has demonstrated that genetic defects serve a key role in the pathogenesis of CHD, and to date, a large number of mutations in >60 genes have been causally linked to CHD (6–8,10–35). Among these established CHD-associated genes, the majority encode cardiac transcription factors (6–8,36). However, CHD is a heterogeneous disorder, and the genetic components underlying CHD in the majority of patients remain unclear.
Mesoderm posterior 1 (MESP1), also known as class C basic helix-loop-helix (bHLH) protein 5, is expressed in the posterior part of the embryonic mesoderm and is an important transcription factor expressed in cardiac progenitors during embryogenesis. It is also the earliest marker identified once a cell has been committed towards cardiac development (37,38). In mice, inactivation of the MESP1 gene leads to mortality due to abnormalities in heart tube formation and heart looping, resulting in various degrees of cardiac bifida (39,40). By contrast, overexpression of MESP1 in mouse embryonic stem cells results in abnormal expression of specific gene sets and, subsequently, accelerated cardiovascular specification and premature appearance of beating cells (41). Among these upregulated genes are crucial cardiovascular transcription factors including NKX2 homeobox 5 (NKX2-5), GATA binding protein 4 (GATA4), T-box 20 (TBX20), heart and neural crest derivatives expressed 2 (HAND2) and myocardin (MYOCD) (41), of which certain genes (NKX2-5, GATA4, TBX20 and HAND2) are involved in the pathogenesis of CHD in humans (13,19,24,27,31–36,42–44). In humans, mutations in MESP1 have been demonstrated to contribute to various types of CHD, including VSD, atrial septal defect, tetralogy of Fallot, coarctation of the aorta and aortic atresia (41,45). However, the prevalence and variety of the MESP1 mutations in Chinese patients with CHD have yet to be investigated.
Materials and methods
Study patients and control individuals
In the present study, a cohort of 178 Chinese Han unrelated patients diagnosed with non-syndromic CHD were recruited from the following hospitals: Shanghai Tenth People's Hospital, Tongji Hospital, Renji Hospital and Shanghai Chest Hospital (Shanghai, China), between February 2013 and March 2015. The available family members of the index patient carrying an identified MESP1 mutation were also included. A total of 95 males and 83 females, of which 9 had a positive family history of CHD were included. A total of 200 ethnically-matched healthy individuals, who had no CHD diagnosis, family history of CHD or any other heart disease, were recruited as controls from the following hospitals: Shanghai Tenth People's Hospital, Tongji Hospital, Renji Hospital and Shanghai Chest Hospital (Shanghai, China), between February 2013 and March 2015. A total of 107 males and 93 females, with no family history of CHD were recruited. All study participants underwent detailed clinical evaluation, including medical histories, physical examination (including assessment for shortness of breath, cyanosis, heart murmur, under-development of limbs or poor growth), 12-lead electrocardiogram and two-dimensional transthoracic echocardiography with color flow Doppler. Transesophageal echocardiography or cardiac catheterization procedure was performed only when clinically indicated. Diagnosis of CHD was confirmed by imaging and/or direct view during cardiac surgery. Subjects with a recognizable syndromic CHD at the time of enrollment, including Down syndrome, Holt-Oram syndrome, Di George syndrome and Turner syndrome, were excluded from the study. The present study was conducted in accordance with the ethical principles outlined in the Declaration of Helsinki. The study protocol was approved by the Institutional Ethical Committee of the Tongji Hospital, Tongji University School of Medicine, China [project no. LL (H)-09-07]. Informed written consent was obtained from the guardians of the patients with CHD and the control individuals prior to the collection of blood samples.
DNA isolation and mutation analysis
Peripheral venous blood samples were drawn from all study subjects. Genomic DNA was isolated from whole blood cells using the Wizard Genomic DNA Purification kit (Promega Corporation, Madison, WI, USA), according to the manufacturer's recommendation. Based on the referential genomic DNA sequence of the MESP1 gene (GenBank accession no.: NC_000015.10), which was derived from the National Center for Biotechnology Information (NCBI; http://www.ncbi.nlm.nih.gov/), the primer pairs used to amplify the coding exons and splicing junctions of MESP1 by polymerase chain reaction (PCR) were designed as presented in Table I. DNA samples were amplified using HotStar Taq DNA Polymerase (Qiagen GmbH, Hilden, Germany) on a Verti Thermal Cycler (Applied Biosystems; Thermo Fisher Scientific, Inc., Waltham, MA, USA) with standard thermocycling conditions. The total volume of the PCR mixture was 25 µl, comprising 11.25 µl deionized water, 2.5 µl 10X buffer, 5 µl 5X Q solution, 2 µl dNTPs (2.5 mM each), 1 µl of each primer (20 µM), 0.25 µl (5 U/µl) HotStar Taq DNA Polymerase (Qiagen, Hilden, Germany) and 2 µl of genomic DNA (200 ng/µl). Thermocycling conditions were as follows: Initial denaturation at 95°C for 15 min, followed by 35 cycles of denaturation at 94°C for 30 sec, annealing at 62°C for 30 sec and extension at 72°C for 1 min, with a final extension at 72°C for 10 min. PCR products were purified with a QIAquick PCR Purification kit (Qiagen GmbH), according to the manufacturer's protocol, and subjected to PCR-sequencing with a BigDye® Terminator v3.1 Cycle Sequencing kit (Applied Biosystems; Thermo Fisher Scientific, Inc.) under an ABI PRISM 3130 XL DNA Analyzer (Applied Biosystems; Thermo Fisher Scientific, Inc.). The total volume of the PCR sequencing mixture was 20 µl, including 8 µl deionized water, 8 µl Premix, 1 µl forward or reverse primer (2 µM) and 3 µl of the purified DNA products (20 ng/µl). The sequencing PCR program was set as follows: A total of 35 cycles of denaturation at 95°C for 20 sec, annealing at 50°C for 15 sec and extension at 60°C for 1 min. The obtained sequences were compared with the genomic reference sequence (GenBank accession no.: NC_000015.10) using the Basic Local Alignment Search Tool (BLAST; https://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastSearch&PROG_DEF=blastn&BLAST_PROG_DEF=blastn&BLAST_SPEC= GlobalAln&LINK_LOC=BlastHomeLink; National Center for Biotechnology Information, Bethesda, MD, USA). For an identified sequence variation, a second independent PCR analysis was performed, as aforementioned, to confirm it. The position of an exonic variation is described according to the guidelines of the human genome variation society using the NCBI reference sequence of the MESP1 mRNA (NM_018670.3). For a newly discovered genetic variation, the public databases for human sequence variations, including single nucleotide polymorphism (SNP; http://www.ncbi.nlm.nih.gov/SNP), the 1000 Genomes Project (1000 GP; http://www.1000genomes.org/) and human gene mutation (HGM; http://www.hgmd.org) databases, were consulted to confirm its novelty.
Table I.Primers for amplification of the coding exons and flanking introns of the Mesoderm Posterior 1 gene. |
Multiple alignments of the MESP1 protein across species
The human MESP1 protein was autonomously aligned with those of a chimpanzee, monkey, dog, mouse and rat, using Multiple Sequence Comparison by Log-Expectation (MUSCLE; http://www.ebi.ac.uk/Tools/msa/muscle/; European Bioinformatics Institute, Hinxton, UK).
Expression plasmids and site-directed mutagenesis
Human heart cDNAs were prepared as described previously (46). The full-length wild-type cDNAs of the human MESP1 gene were amplified by PCR using the pfuUltra high-fidelity DNA polymerase (Stratagene; Agilent Technologies, Inc., Santa Clara, CA, USA) and the following primers: Forward, 5′-ATGGCTAGCTGGAAGGGGCCACTTCACAC-3′ and reverse, 5′-CATTCTAGAGACGGCGTCAGTTGTCC-3′. The total volume of the PCR mixture was 50 µl, including 36 µl deionized water, 5 µl 10X buffer, 4 µl dNTPs (2.5 mM each), 1 µl of each primer (20 µM), 1 µl (2.5 U/µl) pfuUltra high-fidelity DNA polymerase and 2 µl cDNA (100 ng/µl). Thermocycling conditions were as follows: Initial denaturation at 95°C for 2 min, followed by 35 cycles of denaturation at 95°C for 1 min, annealing at 62°C for 30 sec and extension at 72°C for 1 min, with a final elongation at 72°C for 10 min. The PCR fragment was doubly digested by endonucleases NheI and XbaI (Takara Biotechnology Co., Ltd., Dalian, China). The digested product (40 µl/lane), with a length of 912 base pairs, was fractionated by 1.5% agarose gel electrophoresis, purified with the QIAquick Gel Extraction kit (Qiagen GmbH), according to the manufacturer's protocol, and then inserted into pcDNA3.1 (Promega Corporation) to construct the eukaryotic expression vector, pcDNA3.1-MESP1. Similarly, the full-length wild-type cDNAs of the human E47 gene [also termed transcription factor 3 (TCF3) isoform 2] were amplified by PCR using the following primers: Forward, 5′-GGTGCTAGCGGTTTCCAGGCCTGAGGTGC-3′ and reverse, 5′-CCATCTAGACAAAGTGTATGTTTTGTTGC-3′, and doubly digested by NheI and XbaI (Takara Biotechnology Co., Ltd.). Thermocycling conditions were as follows: Initial denaturation at 95°C for 2 min, followed by 35 cycles of denaturation at 95°C for 1 min, annealing at 62°C for 30 sec and extension at 72°C for 2 min, with a final elongation at 72°C for 10 min. The digested product, with a length of 2,044 base pairs, was subcloned into pcDNA3.1 (Promega Corporation) to construct the recombinant plasmid pcDNA3.1-E47. The Ebox-luc [pGL4.23-Dickkopf WNT signaling pathway inhibitor 1 (DKK1)-11] plasmid, which contains a triplicate repeat of the E-box region acCATATGgt located ~11.6 kb upstream of DKK1 and expresses Firefly luciferase (47), was constructed as described previously (41). The identified mutation was introduced into wild-type MESP1 by site-directed mutagenesis using a QuickChange II XL Site-Directed Mutagenesis kit (Stratagene; Agilent Technologies, Inc.) with the following mutagenic primers: Forward, 5′-GTGGCGCCCGCGGGCTAGAGCCTGACCAAGA-3′ and reverse, 5′-TCTTGGTCAGGCTCTAGCCCGCGGGCGCCAC-3′. The mutant was selected by DpnI (Takara Biotechnology Co., Ltd.) digestion and then sequenced for verification. Sequencing was performed as aforementioned using the following primers at either side of the multiple cloning sites of the pcDNA3.1 plasmid: Forward, 5′-TAATACGACTCACTATAGGG-3′ and reverse, 5′-TAGAAGGCACAGTCGAGG-3′.
Dual-luciferase reporter assays
Human embryonic kidney (HEK) 293 cells were purchased from the Shanghai Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences (Shanghai, China) were cultured in Dulbecco's modified Eagle's medium supplemented with 10% fetal calf serum (Invitrogen; Thermo Fisher Scientific, Inc.) at 37°C, and plated at a density of 1×105 cells/well on 24-well plates 24 h prior to transfection. Cells were cotransfected with either 100 ng empty pcDNA3.1 vector (−), 100 ng wild-type MESP1-pcDNA3.1 vector (MESP1), 100 ng Q118X-mutant MESP1-pcDNA3.1 vector (Q118X) or 50 ng wild-type MESP1-pcDNA3.1 vector plus 50 ng Q118X-mutant MESP1-pcDNA3.1 vector (MESP1 + Q118X), together with 250 ng pcDNA3.1-E47, 100 ng Ebox-luc vector and 0.4 ng pGL4.75 (a Renilla luciferase reporter vector, which was used as an internal control to normalize transfection efficiency) using the PolyFect Transfection Reagent (Qiagen GmbH), according to the manufacturer's protocol. Transfected cells were incubated for 48 h at 37°C with 5% CO2, then lysed with Passive Lysis Buffer (Promega Corporation) and assayed with the Dual-Glo luciferase assay kit (Promega Corporation) on a GloMax® 96 Luminometer (Promega Corporation) according to the manufacturer's protocol. Firefly luciferase and Renilla luciferase activities were analyzed using the GloMax® 96 Microplate Luminometer software version 1.9.3 (Promega Corporation), and the activity of the Ebox promoter was presented as fold activation of Firefly luciferase relative to Renilla luciferase. A minimum of three independent cotransfection experiments were performed in triplicate to calculate the average values and standard deviations.
Statistical analysis
Statistical analyses were performed using the SPSS software version 17.0 (SPSS, Inc., Chicago, IL, USA). Continuous variables are expressed as the mean ± standard deviation, and categorical variables are expressed as numbers and percentages. The statistical significance of the differences between groups was assessed using a one-way analysis of variance followed by a post hoc Bonferroni test for multiple comparisons. P<0.05 was considered to indicate a statistically significant difference.
Results
Clinical characteristics of the study subjects
A cohort of 178 unrelated patients with was clinically evaluated in comparison with a total of 200 unrelated non-CHD control individuals. All of the patients had confirmed CHD diagnoses; while the control individuals had no congenital anomalies in cardiovascular structures. There was no statistical difference in age, gender or ethnicity between the patient and control groups. The baseline clinical features of the 178 patients with CHD are summarized in Table II.
Identification of a novel MESP1 mutation in CHD
Direct PCR-sequencing of the MESP1 gene in 178 unrelated patients with CHD identified a heterozygous nonsense mutation in one patient, with a mutational prevalence of ~0.56%. More specifically, a substitution of thymine for cytosine in the first nucleotide of codon 118 (c.352C>T), predicting the transition of the codon coding for glutamine into a stop codon at amino acid position 118 (p.Q118X), was detected in a 3-month-old female with DORV and VSD. The sequence chromatograms depicting the heterozygous MESP1 mutation in addition to its control sequence are presented in Fig. 1. A schematic diagram displaying the location of the identified mutation and the bHLH structural domain of the MESP1 protein is presented in Fig. 2 (48). The nonsense mutation was not identified in the 400 reference chromosomes or in the SNP, 1000 GP and HGM databases (consulted July 5th, 2016). The mutation carrier had no family history of CHD and her parents had no CHD. Genetic screening of the mutation carrier's parents identified that the mutation was absent in her parents, indicating that it is a de novo mutation.
Alignment of multiple MESP1 sequences across species
As presented in Fig. 3, a cross-species alignment of the MESP1 protein sequences indicated that the altered amino acid glutamine at position 118 was completely conserved evolutionarily.
Transcriptional activation of Q118X-mutant MESP1
It has been demonstrated that MESP1 binds to the promoter regions containing putative bHLH-binding sites (Eboxes) of several transcription factors (41). However, MESP1 does not bind to Eboxes alone, it forms heterodimers with E47 or E12 (E47 and E12 are two isoforms of TCF3, a member of the ubiquitous E-protein family of bHLH transcription factors) in order to activate transcription. In addition, it has been demonstrated that the MESP1/E47 heterodimer activates transcription significantly more than either one alone (41). Thus, in order to assess the effect of a mutation on MESP1 transcriptional activity, E47 was used in the present study. As presented in Fig. 4, in the presence of E47, the wild-type MESP1 and the Q118X-mutant MESP1 (Q118X) activated the Ebox-containing promoter by ~14-fold and ~1-fold, respectively. When wild-type MESP1 was co-expressed with the same amount of Q118X-mutant MESP1, the induced transcriptional activation was ~7-fold. These results indicate that mutant MESP1 does not have transcriptional activity or a dominant-negative effect on its wild-type counterpart.
Discussion
In the present study, a novel heterozygous mutation in MESP1, p.Q118X, was discovered in a patient with DORV and VSD. The mutant allele was absent in the unaffected relatives examined and in 400 control chromosomes. A cross-species alignment of the MESP1 protein sequences indicated that the altered amino acid was completely conserved evolutionarily. Biological assays demonstrated that mutant MESP1 had no transcriptional activity. Therefore, genetically compromised MESP1 may predispose an individual to DORV and VSD.
The MESP1 gene maps on to human chromosome 15q26.1, which contains 2 exons and codes for a bHLH transcription factor with 268 amino acids that is crucial for normal cardiovascular development (38). The bHLH domain is required for DNA sequence recognition and binding to the consensus motif of CATATG (Ebox) within the promoters of target genes; it is also responsible for protein-protein interactions (38,41,48). However, MESP1 do not bind to Eboxes alone and instead form heterodimers with E47 or E12 in order to activate transcription (41). E47 and E12 are two isoforms of TCF3, a member of the ubiquitous E-protein family of bHLH transcription factors (41). It has been demonstrated that the MESP1/E47 heterodimer activates transcription significantly more using a previously identified MESP1 binding Ebox motif in the DKK1 enhancer when compared with either one alone (41). In the present study, the p.Q118X mutation detected in a patient with CHD was located in the bHLH domain and is predicted to produce a truncated protein with only a partial bHLH domain left. Thus it may prevent the transcriptional activation of MESP1, which was verified by functional analysis. Overall, these results together with previous reports (41,45) strongly suggest that a MESP1 loss-of-function mutation is an alternative molecular mechanism underpinning CHD.
An association between genetically defective MESP1 and enhanced susceptibility to CHD has been reported in mouse models. Genetic lineage tracing in mice indicated that MESP1 was the earliest marker of cardiovascular progenitors, tracing almost all of the cardiac cells including derivatives of the primary and second heart fields, and serves a pivotal role in cardiovascular morphogenesis, particularly during the early specification and migration of cardiac precursors (37,38). Homozygous MESP1-null mice suffered embryonic mortality due to defects in heart tube formation and looping, resulting in various degrees of cardia bifida from full to partial bifurcations, which was most likely induced by the delay in mesodermal migration and failure of ventral mesoderm fusion (37–40). In addition, a number of studies have indicated that MESP1 resides at the top of a large transcriptional hierarchy that regulates the expression of 423 genes, representing 1.3% of the murine transcriptome (38,41). Among the genes upregulated by MESP1, there are a number of genes encoding cardiovascular core transcription factors, including NKX2-5, GATA4, TBX20 and HAND2 (41). In addition, targeted inactivation of NKX2-5, GATA4, TBX20 or HAND2 in mice has been demonstrated to cause embryonic lethality with various cardiovascular developmental anomalies (49–56). These experimental results suggest that the MESP1 loss-of-function mutation may contribute to CHD in humans.
In humans, MESP1 variations have been causally linked to a number of CHDs. By high-resolution melting curve analysis and sequencing, Werner et al (41) scanned the coding exons and flanking introns of MESP1 in 647 unrelated patients with congenital conotruncal and associated heart defects, and identified 6 rare, nonsynonymous variants that were not seen in ethnically matched controls, and 1 likely race-specific nonsynonymous variant. Functional analyses identified that three of these variants reduced the activation of transcription by MESP1. Lahm et al (45) sequenced the coding regions of MESP1 in 215 unrelated patients with congenital heart disease, and identified two missense mutations in two patients that were absent in the controls. Biological assays demonstrated that one mutant had an enhanced transcriptional activity, however, the other had no functional alteration. These well-established CHD-associated MESP1 mutations are summarized in Table III. These results coupled with those of the present study suggest that pathologic mutations in MESP1 may predispose individuals to CHD.
In conclusion, the results of the present study indicate that there is an association between the MESP1 loss-of-function mutation and an increased susceptibility to DORV in humans. This widens the known mutational spectrum of MESP1 associated with CHD and highlights the potential broader role of MESP1 in cardiovascular development and CHD. Thus, the present study provides evidence for the potential implications of genetic counseling and he development of personalized therapeutic strategies for the treatment of patients with CHD.
Acknowledgements
The present study was supported by the Key Program for Basic Research of Shanghai, China (grant no. 14JC1405500), the National Natural Science Fund of China (grant nos. 81470372 and 81641014), the Natural Science Fund of Shanghai, China (grant no. 16ZR1432500) and the Key Project for Basic Research of Shanghai Chest Hospital, China (grant no. 2014YZDH10102).
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