Presence of the minor allele of microRNA205 rs3842530 polymorphism increases 18FDG uptake in patients with breast cancer via targeting VEGF

  • Authors:
    • Shiying Qu
    • Tie Wang
    • Jingwei Huang
  • View Affiliations

  • Published online on: October 27, 2017     https://doi.org/10.3892/mmr.2017.7914
  • Pages: 636-642
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Abstract

MicroRNAs (miRNAs) are regarded as key regulators of gene expression involved in the pathogenesis of various diseases. Numerous single nucleotide polymorphisms (SNPs) in miRNA genes have been found to be associated with human diseases by affecting the processing process of miRNAs. In the present study, patients with breast cancer underwent a PET scan, and the maximum standard uptake value (SUVmax)/partial volume‑corrected standard uptake value (SUVpvc) were determined in each individual. The samples were collected and genotyped for rs3842530. Statistical analysis was performed to evaluate the difference between the genotype groups. The results demonstrated that miR‑205 downregulated the expression of vascular endothelial growth factor (VEGF) by binding to its 3'untranslated region. The introduction of exogenous miRNA, which mimicked miR‑205, decreased the protein and mRNA expression levels of VEGF and, consistently, the suppression of endogenous miR‑205 resulted in an increase in the expression levels of VEGF. Furthermore, it was found that the expression of mature miR‑205 was markedly reduced by the presence of rs3842530. 18F‑fluorodeoxyglucose (18FDG) metabolism, including SUVmax and SUVpvc, are important parameters of PET, and dysregulation of the expression of VEGF has been reported to be associated with an altered 18FDG metabolism. In the present study, it was found that the presence of minor allele rs3842530 was correlated with increased SUVmax and SUVpvc, which may have been mediated by release of the physiologically inhibited expression of VEGF. Therefore, VEGF was a direct target of miR‑205, and the presence of rs3842530 compromised the expression of miR‑205, suggesting it is a promising biomarker for the metabolism of 18FDG.

Introduction

PET with 18F-fluorodeoxyglucose (18FDG) has been applied specifically to differentiate malignant and benign nodules. Several reports have indicated that the number of patients with pulmonary nodules who receive avoidable surgical biopsies is reduced by PET (1). PET with 18FDG is a noninvasive and accurate method to diagnose single nucleotide polymorphisms (SNPs), with an overall specificity of 82% and sensitivity of 95% (2). However, in a substantial number of patients, surgical resection is required to differentiate malignant and benign nodules (3). The combining of PET and computed tomography (CT) has demonstrated superior properties in identifying a solitary pulmonary nodule (SPN) as malignant or benign, and the specificity of PET and sensitivity of CT lead to markedly enhanced accuracy overall (4).

The uptake of FDG on PET can be semi-quantitatively and qualitatively evaluated. Visual assessment, which based on comparisons of FDG uptake between the normal mediastinal blood pool and lesion is the easiest method, however, it is difficult to visually evaluate the nodules with comparable FDG uptake to the mediastinum (5). Consequently, a cut-off at the standard uptake value (SUVmax) is used to confirm malignancy. However, the SUV is affected by a series of factors, including lesion diameter, time following injection, blood glucose concentration and body size (6). Consequently, the SPN SUVmax may not represent true conditions.

As a group of non-coding small RNAs, microRNAs (miRNAs) regulate the expression of genes at the post-transcriptional level (7). miRNAs induce translational repression or mRNA degradation by targeting to the complementary sequences in the 3′untranslated regions (3′UTRs) of their target RNAs (8). Numerous studies have demonstrated that miRNAs are important in the maintenance, development and progression of diseases, including cancer (9). Accumulating evidence reports that miRNAs are involved in the progression of Ewing sarcoma, providing novel perspectives for applications in Ewing sarcoma therapy and diagnosis (10).

Hypoxia-inducible factor 1α (HIF1A)-activated transcription pathways are involved in the regulation of vascular endothelial growth factor (VEGF) genes and the expression of downstream solute carrier family 2, member 1. Under HIF1A induction-dependent hypoxic conditions, VEGF serves as the key mediator of transcription, vascular permeability and angiogenesis (11). VEGF plasma levels have been confirmed to be associated with a C>T polymorphism located at 936 in the 3′UTR (6). The T variant, which is associated with lower levels of VEGF, has been demonstrated to be associated with low FDG uptake (12) and colon cancer (13). These findings indicate that variants, which can alter the expression of VEGF, may be involved in the variability of FDG uptake in malignant tissues.

It has been shown that VEGF is a direct target of miR-125a in colon cancer (14,15). The rs3842530 SNP located in pri-miR-125a has been reported to compromise the processing of the mature miRNA and reduce its expression (16). Considering the role of VEGF in the determination of 18FDG metabolism, and the altered expression of miR-205 caused by the variant, the present study hypothesized that the polymorphism may be associated with 18FDG metabolism, and this was investigated in the present study by examining associations.

Patients and methods

Patients

The present study involved a total of 270 patients with breast cancer, all of which underwent a PET scan and donated 5 ml peripheral blood. All cases were diagnosed at Beijing Chaoyang Hospital Affiliated to Capital Medical University (Beijing, China) between September 2013 and December 2014. Patients suspected of breast cancer were suggested to undergo PET-CT examinations. The clinicopathological data of the participants are listed in Table I. Breast cancer tissue samples were available in 39 patients, DNA was extracted from cancer tissue samples and genotyped through direct sequencing. Written informed consent was obtained from each participant prior to the investigation. The study was performed according to the Helsinki declaration and approved by the Ethical Committee of Capital Medical University.

Table I.

Demographic, clinicopathological and genotypic parameters of the patients recruited in the present study.

Table I.

Demographic, clinicopathological and genotypic parameters of the patients recruited in the present study.

miR205 rs3842530 genotypeINS/INSINS/DEL + DEL/DELP-value
Patients (n)16597+8
Sex
  Male9862
  Female67430.857
Age (years)61.35±13.459.71±12.80.413
Grading
  G1/G211165
  G3/G454400.213
pT category
  T09359
  T1/T23828
  T3/T434180.811
Metastases
  M (+)3730
  M (−)128750.621
FDG metabolism
  SUVmax9.33±3.8613.41±3.94<0.001
  SUVpvc8.25±2.8912.97±3.22<0.001

[i] pT, primary tumor; FDG, fluorodeoxyglucose; SUVmax, maximum standard uptake value; SUVpvc, partial volume-corrected standard uptake value; INS, insertion; DEL, deletion.

18F-FDG PET/CT imaging

Each patient underwent FDG PET-CT examinations. In brief, the patients were weighed and fasted for 12 h prior to the PET-CT scan. The patients blood glucose levels were also measured, and those with a blood glucose level of 150 mg/dl were excluded from the study. Each patient was intravenously injected with 18F-FDG (37 MBq/10 kg; GE Healthcare Life Sciences, Little Chalfont, UK). At 1 h post-injection, the patients were instructed to raise their arms, and images were obtained from the top of the skull to the middle of the thigh via PET-CT scans, followed by a whole-body PET-CT scan (Discovery LS; GE Healthcare Life Sciences). The PET-CT protocol, including a low dose CT scan and a 3D PET whole body scan were performed at 2.5 min/bed position.

PET image quantitative analysis

Each PET image was quantitatively analyzed using Xeleris software (version 1.1363; GE Healthcare Life Sciences). PET images were initially processed and visually analyzed on sagittal, transaxial and coronal displays by three experienced technicians, who were all blind to the clinical data and the results of previous imaging studies. The circular target region was drawn to the abnormal 18F-FDG-uptake-increased areas in the tumor and the standardized uptake values (including SUVmax and SUVmean) were measured. For each slice, at least three circular (1 cm diameter) target regions were drawn from the corresponding normal breast tissues, and the highest SUVmax was presented as the SUVmax of the normal breast tissue. The radioactivities of each tumor and normal breast tissue sample were assessed and the tumor/normal ratios were calculated.

Genotyping by direct sequencing

DNAs were extracted from homogenized cancer tissue samples and genotyped through direct sequencing. In brief, total DNA was extracted from sample tissues using a ChargeSwitch® DNA Extraction kit (Thermo Fisher Scientific, Inc., Waltham, MA, USA). The DNA extracts were then amplified through polymerase chain reaction (PCR) analysis. PCR amplification was performed on an ABI 7300 Real-Time PCR system (Applied Biosystems; Thermo Fisher Scientific Inc.) with a mixture including reverse transcription product (3 µl), forward primer (1 µl), reverse primer (1 µl), 2XSYBR-Green I Master mix (12.5 µl; Thermo Fisher Scientific Inc.) and water (7.5 µl). The reaction settings were as follows: 20 sec at 95°C, 3 sec at 95°C, and 40 cycles of 3 sec at 95°C and 30 sec at 60°C. The primers, forward 5′-ACAGGCTGAGGTTGACATGC-3′, reverse 5′-GAGTTACTCTTGCTGCTGCTG-3′, were used to amplify a 247 bp fragment. The amplified samples were sent to Shanghai Shenggong Biology Engineering Technology Service, Ltd. (Shanghai, China) for genotyping using a direct sequencing method.

RNA isolation and reverse transcription-quantitative PCR (RT-qPCR) analysis

Total RNA in the sample tissues and normal tissues were isolated using an RNA extraction kit (Sigma-Aldrich; Merck Millipore, Darmstadt, Germany) according to the manufacturer's protocol. The cDNA strands of target RNAs were synthesized using the high-capacity cDNA reverse transcription kit (Applied Biosystems; Thermo Fisher Scientific, Inc.) according to the manufacturer's protocol. The RNA expression was quantified and qPCR analysis was performed. PCR amplification was performed on an ABI 7300 Real-Time PCR system (Applied Biosystems; Thermo Fisher Scientific. Inc.). The relative expression of miR-205, VEGF mRNA and β-actin were determined using the 2−∆∆Cq method (17). The PCR conditions were as follows: 2 min denaturation at 94°C, 28 cycles at 94°C for 30 sec and 58°C for 30 sec and 72°C for 40 sec. The expression of β-actin mRNA was determined as internal control.

MCF-7 cell culture and transfection

The MCF-7 cells (Chinese Cell Bank of the Chinese Academy of Sciences, Shanghai, China) were cultured 1×104 cell per well in Eagle's minimum essential medium (Invitrogen; Thermo Fisher Scientific, Inc.) supplemented with 20% FBS (Gibco; Thermo Fisher Scientific, Inc.) at 37°C in a 5% CO2 environment. VEGF mimic, miR-205 mimics and scramble control mimics (GenePharma, Inc., Suzhou, China) were transfected into MCF-7 cells using Lipofectamine 2000 reagent (Invitrogen Thermo Fisher Scientific, Inc.) for 4 h at 37°C.

Bioinformatics analysis

Bioinformatics analysis was performed using online miRNA database (www.mirdb.org) (4).

Vector construction and mutagenesis

The VEGF gene −3onstr, which contains a conserved binding site for miR-205, was amplified from the human gene extracted from cancer tissue samples using PCR. The PCR products were subcloned into the pmiR-RB-REPORT™ vector (Promega Corporation, Madison, WI, USA). In addition, mutant fragments were generated from mutagenesis and introduced into the same sites of the control vector.

Luciferase assay

The VEGF gene −3se as, which contains a miR-205 binding site, was amplified from the human gene using PCR. PCR amplification was performed on an ABI 7300 Real-Time PCR system (Applied Biosystems; Thermo Fisher Scientific. Inc.) with a mixture including reverse transcription product (3 µl), forward primer (1 µl), reverse primer (1 µl), 2XSYBR-Green I Master mix (12.5 µl; Thermo Fisher Scientific. Inc.) and water (7.5 µl). The reaction setting were as follows: 20 sec at 95°C, 3 sec at 95°C, 40 cycles of 3 sec at 95°C and 30 sec at 60°C. The primers used to amplify VEGF were: Forward: 5′-CCTTTGGGTTTTGCCAGA−3′ and Reverse: 5′-CCAAGTTTGTGGAGCTGA−3′. The PCR products were subcloned into the pmiR-RB-REPORT™ vector (Promega Corporation). Mutant fragments were also generated from mutagenesis and introduced into the same sites of the control vector. For the analysis of luciferase activity, MCF-7 cells were seeded 1×104 cell per well in 96-well plates overnight prior to transfection. The cells were cotransfected with miR-205 mimic/mimic control and wild-type/mutant vector (Promega Corporation) using the Lipofectamine 2000 Transfection system (Invitrogen; Thermo Fisher Scientific, Inc.). At 48 h post-transfection, luciferase activity was measured using the Dual-Luciferase Reporter Assay system (Promega Corporation) according to the manufacturer's protocol. A Renilla luciferase plasmid was used as an internal control. Each experiment was repeated three times.

Western blot analysis

Western blot analysis was performed to determine the protein expression levels of miR-205 and VEGF in the sample tissues and cultured cells. The sample tissues were rinsed with 4°C PBS (Beijing Zhongshan Golden Bridge Biotechnology Co., Ltd., Beijing, China) and total proteins were extracted using cell lysis buffer, which contained 50 mmol/l Tris HCl, 150 mmol/l NaCl, 0.1% SDS, 100 µg/ml phenylmethylsulfonyl fluoride, 1% NP-40 and 1 µg/ml aprotinin (pH 8.0). The concentrations of protein extracts were determined using the Bradford method. The protein extracts (30 µg) were loaded on 10% SDS-PAGE gels. Following electrophoresis, the proteins were transblotted onto nitrocellulose membranes (Bio-Rad Laboratories, Inc., Hercules, CA, USA). The blots were then blocked and washed to avoid unspecific binding. The membranes were then incubated with primary antibodies (anti-VEGF antibody; sc-4570; 1:1,000; anti-β-actin antibody; sc-418965; 1:10,000) and secondary antibody (sc-51948; 1:10,000; all from Santa Cruz Biotechnology, Inc.). The bands were visualized by chemiluminescence (ECL-Plus; Santa Cruz Biotechnology, Inc.).

Statistical analysis

Statistical analysis was performed using the Statistical Package for the Social Sciences software (SPSS) for Windows 13.0 (SPSS, Inc., Chicago, IL, USA). The data for SUVmean, SUVmax and tumor/normal are expressed as the mean ± standard deviation, and a two-sample t-test was used for comparison between tumors and normal tissues. A χ2 test was performed to compare categorical data in different groups. The odds ratios and 95% confidence intervals were calculated using univariate and multivariate logistic regression analyses to determine potential associations. Differences between the groups were determined using a Mann-Whitney test for nonparametric data. Group differences for dichotomous data were determined using a χ2 test or Fishers exact test. P<0.05 was considered to indicate a statistically significant difference.

Results

miR-205 represses the expression of VEGF

Using bioinformatics analysis, miR-205 was predicted to target the human VEGF 3UTR at position 166–173 (Fig. 1). To investigate whether the expression level of miR-205 was correlated with the expression level of VEGF, luciferase reporter vectors were constructed, which contained a wild-type or mutated VEGF 3UTR downstream of Firefly luciferase (Fig. 1). The miR-205 mimic and reporter vectors were co-transfected into MCF-7 cells. A dual-luciferase assay was performed 48 h post-transfection. The results of the dual-luciferase assay showed that when the reporter vector contained a wild-type VEGF 3UTR, miR-205 suppressed the expression of luciferase. By contrast, mutation of the seed regions completely eliminated this inhibition (Fig. 2). These results showed that miR-205 targeted the VEGF 3′UTR directly and suppressed the expression of VEGF.

To determine whether miR-205 disrupted the endogenous expression of VEGF in breast cancer cells, miR-205 mimics were transfected into MCF-7 cells, with blank and scramble as negative controls, and VEGF small interfering (si)RNA as a positive control. The data showed that mRNA and protein expression levels of VEGF were suppressed by the miR-205 mimic (Fig. 3A and B). Similar experiments were performed involving miR-205 inhibitor treatment, and the decrease of miR-205 increased the mRNA and protein levels of VEGF (Fig. 3A and B).

Rs3842530 decreases the expression of VEGF via miR-205

An SNP exists in the miR-205 gene, termed rs3842530. To investigate whether the expression of miR-205 can be eliminated by this SNP in breast cancer, the present study compared the expression levels of miR-205 in a number of breast tumor tissue samples with different miR-205 genotypes. The results showed that the expression level of miR-205 was reduced in samples containing rs3842530 (Fig. 4A). It was hypothesized that a reduction of miR-205 mediated by rs3842530 leads to a further increase in the expression of VEGF. To evaluate this, RT-qPCR analysis was used to determine the mRNA expression level of VEGF. In addition, western blot analysis was used to determine the protein expression level of VEGF (Fig. 4B and C). The results showed that the mRNA and protein levels of VEGF were significantly increased in samples with rs3842530 (Fig. 4B and C). Of note, the changes in miR-205 and the level of VEGF were inversely correlated.

Rs3842530 affects 18FDG metabolism mediated by miR-205 and VEGF

Correlation analyses were performed to determine whether rs3842530 was associated with certain breast tumor characteristics. It was found that patients with the minor allele of rs3842530 had significantly higher SUVmax and SUVpvc values, compared with patients with a wild-type genotype (Table I). As is already known, SUVmax and SUVpvc are important parameters in 18FDG-PET analysis, and they can be used to reflect glucose metabolism. A previous study showed that a high level of glucose metabolism is an important characteristic in malignant tumors and that dysregulation of the expression of VEGF has been reported to be associated with altered glucose metabolism (4). Consequently, the present study hypothesized that patients with the minor allele of rs3842530 have associated higher glucose metabolism. These data suggested that the minor allele of rs3842530 accelerated glucose metabolism by compromising the expression of miR-205, which indicates it as a promising biomarker for the metabolism of 18FDG.

Discussion

As non-coding small RNAs, miRNAs negatively regulate the expression of genes via the degradation of mRNA or via translational repression. In humans, >700 miRNAs have been identified and registered, and each of these can bind to several genes on the bases of the seed sequence matches in their 3′UTRs (18). miRNAs are involved in pathologic and biological processes, including cell apoptosis, proliferation, differentiation and metabolism (19), and they have shown potential as tissue-specific biomarkers, which may be used to identify cancer origin and type (20). Increasing evidence demonstrates that the deregulation of miRNAs is involved in human cancer, and suggests a causative role of miRs in cancer progression and initiation as they can serve as tumor suppressors or oncogenes (21). Marked differences in the expression patterns of miRNAs have been reported among adenocarcinoma, in esophageal and squamous cell carcinoma and in other types of cancer (22). High expression levels of miR-205 in malignant and benign squamous epithelia, including esophageal squamous cell carcinoma (ESCC), were reported by Kimura et al (23), whereas the expression level was lower in tissues and cell lines other than squamous epithelia. By contrast, the expression level of miR-21, which acts as an oncogenic miRNA in several types of cancer, was induced in ESCC, compared with paired normal squamous epithelia. However, elucidation of the roles of functional VEGF specific-miRs remained limited (23). In the present study, it was predicted that miR-205 targeted the human VEGF 3UTR at position 166–173 using bioinformatics analysis (Fig. 1). Additionally, a dual-luciferase assay was performed, which found that in reporter vectors containing a wild-type VEGF 3UTR, miR-205 suppressed the expression of luciferase. By contrast, seed region mutations completely eliminated this inhibition (Fig. 2). These results confirmed that miR-205 targeted the VEGF 3UTR directly.

VEGF serves as an essential factor in the angiogenesis of tumors, and VEGF pathway activation requires the binding of ligands, including VEGFA, to one of its receptors, including kinase insert domain receptor (KDR) or fms-like tyrosine kinase 1 (FLT1). Consequently, downstream signals are generated to stimulate the structural reorganization and proliferation of endothelial cells (24). There are four members in the VEGF family, including VEGFD, VEGFC, VEGFB and VEGFA, and VEGF receptors are comprised of three subtypes, including VEGFR3, VEGFR2 (KDR) and VEGFR1 (FLT1) (25). VEGFA acts as major regulator in the development of angiogenesis and vasculogenesis, predominantly by interacting with KDR and FLT1 to produce downstream signaling (25). As a tyrosine kinase receptor, FLT1 demonstrates ~10-fold higher affinity, compared with KDR in binding VEGFA. Although VEGF ligands poorly activate FLT1, it has been found to accelerate tumor metastasis and growth (25). By contrast, potent downstream signals are induced when the VEGF ligand binds KDR, leading to endothelial cell migration and growth (25). There has been limited success in targeted therapy for malignant glioma due to the converging complex interactions and parallels among certain critical pathways, including pathways involved in the regulation of angiogenesis of tumors (26). In the present study, miR-205 mimics were transfected into MCF-7 cells, with blank and scramble as negative controls, and VEGF siRNA as a positive control. The data showed that the mRNA and protein expression levels of VEGF were suppressed by the miR-205 mimic (Fig. 3A and B). Similar experiments were performed using miR-205 inhibitor, and the decrease in miR-205 increased the mRNA and protein levels of VEGF (Fig. 3A and B).

SNPs are risk factors of breast cancer as nine large genome-wide association studies reported (27). However, the commercial exploitation of SNPs in clinical use remains controversial despite considerable progress (28). Further investigations are required to investigate the potential functional effect of specific SNPs on PET uptake in human cancer. A previous study was performed involving 37 patients with breast cancer without metastases, which demonstrated the association between FDG uptake in breast cancer and a human SNP (rs3025039 of VEGFA) (12). miRs have been identified as gene regulators, which are expressed at aberrant levels and are involved in virtually all subtypes of cancer (29). miRs target the 3UTR of target genes, re gions which show a high level of evolutionarily conservation (30), indicating the importance of these regions in natural selection. As each miRNA manipulates numerous mRNAs at the same time (31), the potential for cellular transformation originating from a single miRNA dysfunction is high. The roles of the miRNA SNPs in disorders have been identified and their importance has been confirmed. mir-125a, which shows aberrant expression levels in breast cancer (32) has an SNP variant allele in the mature miRNA sequence, which reduces the expression level (33). It has been demonstrated that SNPs in binding sites of RNAs may be associated with disease, for example, miR-189 binding is disrupted by a point mutation located in the 3UTR of SLIT and NTRK like family member 1 in certain patients with Tourettes syndrome (34). In addition, SNPs in miRNA target spots in human cancer genes were reported in a study in which differences in allele frequencies between normal and cancerous tissues were found (35). Finally, it has been reported that an SNP existing in the binding site of miRNA in the kit oncogene was associated with induced expression of genes in papillary thyroid cancer (36). In the present study, breast cancer tissue samples were collected and genotyped for rs3842530 (37). It was found that the expression level of miR-205 was reduced in samples containing rs3842530 (Fig. 4A), and the mRNA and protein levels of VEGF were significantly increased in samples with rs3842530 (Fig. 4B and C). Furthermore, an association experiment was performed in the breast cancer patient population (n=270), and it was identified that patients with the minor allele of rs3842530 had significantly higher SUVmax and SUVpvc, compared with those patients with a wild-type genotype (Table I).

Taken together, the findings of the present study showed that VEGF was a direct target of miR-205 and the presence of rs3842530 reduced the expression of VEGF, rs3842530 was associated with 18FDG metabolism in patients with breast cancer and may be a promising biomarker for PET scan parameter predictions.

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January-2018
Volume 17 Issue 1

Print ISSN: 1791-2997
Online ISSN:1791-3004

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Spandidos Publications style
Qu S, Wang T and Huang J: Presence of the minor allele of microRNA205 rs3842530 polymorphism increases 18FDG uptake in patients with breast cancer via targeting VEGF. Mol Med Rep 17: 636-642, 2018
APA
Qu, S., Wang, T., & Huang, J. (2018). Presence of the minor allele of microRNA205 rs3842530 polymorphism increases 18FDG uptake in patients with breast cancer via targeting VEGF. Molecular Medicine Reports, 17, 636-642. https://doi.org/10.3892/mmr.2017.7914
MLA
Qu, S., Wang, T., Huang, J."Presence of the minor allele of microRNA205 rs3842530 polymorphism increases 18FDG uptake in patients with breast cancer via targeting VEGF". Molecular Medicine Reports 17.1 (2018): 636-642.
Chicago
Qu, S., Wang, T., Huang, J."Presence of the minor allele of microRNA205 rs3842530 polymorphism increases 18FDG uptake in patients with breast cancer via targeting VEGF". Molecular Medicine Reports 17, no. 1 (2018): 636-642. https://doi.org/10.3892/mmr.2017.7914