|
1
|
Zhu N, Zhang D, Wang W, Li X, Yang B, Song
J, Zhao X, Huang B, Shi W, Lu R, et al: A Novel coronavirus from
patients with pneumonia in China, 2019. N Engl J Med. 382:727–733.
2020.PubMed/NCBI View Article : Google Scholar
|
|
2
|
Zhou P, Yang XL, Wang XG, Hu B, Zhang L,
Zhang W, Si HR, Zhu Y, Li B, Huang CL, et al: A pneumonia outbreak
associated with a new coronavirus of probable bat origin. Nature.
579:270–273. 2020.PubMed/NCBI View Article : Google Scholar
|
|
3
|
Wu F, Zhao S, Yu B, Chen YM, Wang W, Song
ZG, Hu Y, Tao ZW, Tian JH, Pei YY, et al: A new coronavirus
associated with human respiratory disease in China. Nature.
579:265–269. 2020.PubMed/NCBI View Article : Google Scholar
|
|
4
|
Wang C, Horby PW, Hayden FG and Gao GF: A
novel coronavirus outbreak of global health concern. Lancet.
395:470–473. 2020.PubMed/NCBI View Article : Google Scholar
|
|
5
|
Gorbalenya AE, Baker SC, Baric RS, de
Groot RJ, Drosten C, Gulyaeva AA, Haagmans BL, Lauber C, Leontovich
AM, Neuman BW, et al: Severe acute respiratory syndrome-related
coronavirus: The species and its viruses-a statement of the
Coronavirus Study Group. bioRXiv 2020.
|
|
6
|
Enserink M: Science Latest News: ‘A bit
chaotic.’ Christening of new coronavirus and its disease name
create confusion. 2020.
|
|
7
|
Jiang S, Shi Z, Shu Y, Song J, Gao GF, Tan
W and Guo D: A distinct name is needed for the new coronavirus.
Lancet. 395(949)2020.PubMed/NCBI View Article : Google Scholar
|
|
8
|
Coronaviridae Study Group of the
International Committee on Taxonomy of Viruses. The species Severe
acute respiratory syndrome-related coronavirus: Classifying
2019-nCoV and naming it SARS-CoV-2. Nat Microbiol. 5:536–544.
2020.PubMed/NCBI View Article : Google Scholar
|
|
9
|
Lu R, Zhao X, Li J, Niu P, Yang B, Wu H,
Wang W, Song H, Huang B, Zhu N, et al: Genomic characterisation and
epidemiology of 2019 novel coronavirus: Implications for virus
origins and receptor binding. Lancet. 395:565–574. 2020.PubMed/NCBI View Article : Google Scholar
|
|
10
|
Ahmed SF, Quadeer AA and McKay MR:
Preliminary identification of potential vaccine targets for the
COVID-19 coronavirus (SARS-CoV-2) based on SARS-CoV immunological
studies. Viruses. 12(254)2020.PubMed/NCBI View Article : Google Scholar
|
|
11
|
Wu A, Peng Y, Huang B, Ding X, Wang X, Niu
P, Meng J, Zhu Z, Zhang Z, Wang J, et al: Genome composition and
divergence of the novel coronavirus (2019-nCoV) originating in
China. Cell Host Microbe. 27:325–328. 2020.PubMed/NCBI View Article : Google Scholar
|
|
12
|
Zhu Z, Zhang Z, Chen W, Cai Z, Ge X, Zhu
H, Jiang T, Tan W and Peng Y: Predicting the receptor-binding
domain usage of the coronavirus based on kmer frequency on spike
protein. Infect Genet Evol. 61:183–184. 2018.PubMed/NCBI View Article : Google Scholar
|
|
13
|
Kuo L, Hurst-Hess KR, Koetzner CA and
Masters PS: Analyses of coronavirus assembly interactions with
interspecies membrane and nucleocapsid protein chimeras. J Virol.
90:4357–4368. 2016.PubMed/NCBI View Article : Google Scholar
|
|
14
|
Nakagawa K, Lokugamage KG and Makino S:
Viral and cellular mRNA translation in coronavirus-infected cells.
Adv Virus Res. 96:165–192. 2016.PubMed/NCBI View Article : Google Scholar
|
|
15
|
Zhao JY, Yan JY and Qu JM: Interpretations
of ‘Diagnosis and treatment protocol for novel coronavirus
pneumonia (Trial Version 7)’. Chin Med J (Engl). 133:1347–1349.
2020.PubMed/NCBI View Article : Google Scholar
|
|
16
|
Rothe C, Schunk M, Sothmann P, Bretzel G,
Froeschl G, Wallrauch C, Zimmer T, Thiel V, Janke C, Guggemos W, et
al: Transmission of 2019-nCoV infection from an asymptomatic
contact in Germany. N Engl J Med. 382:970–971. 2020.PubMed/NCBI View Article : Google Scholar
|
|
17
|
Lan L, Xu D, Ye G, Xia C, Wang S, Li Y and
Xu H: Positive RT-PCR test results in patients recovered from
COVID-19. JAMA. 323:1502–1503. 2020.PubMed/NCBI View Article : Google Scholar
|
|
18
|
Yeo C, Kaushal S and Yeo D: Enteric
involvement of coronaviruses: Is faecal-oral transmission of
SARS-CoV-2 possible? Lancet Gastroenterol Hepatol. 5:335–337.
2020.PubMed/NCBI View Article : Google Scholar
|
|
19
|
Holshue ML, DeBolt C, Lindquist S, Lofy
KH, Wiesman J, Bruce H, Spitters C, Ericson K, Wilkerson S, Tural
A, et al: First case of 2019 novel coronavirus in the United
States. N Engl J Med. 382:929–936. 2020.PubMed/NCBI View Article : Google Scholar
|
|
20
|
Xu JH, Wang SL, Zhang SX, et al: Methods
for nucleic acid detection of 2019 novel coronavirus. International
Journal of Laboratory Medicine. 2020 Mar; 1-19. Chinese. Available
from: http://kns.cnki.net/kcms/detail/50.1176.R.20200303.1428.002.html.
|
|
21
|
General Office of National Health
Commission of the People's Republic of China. Prevention and
control scheme for novel coronavirus pneumonia (version 2)
[Internet]. 2020 Jan 22; Available from: http://www.nhcgovcn/jkj/s3577/202001/c67cfe29ecf1470e8c7fc47d3b751e88shtml.
|
|
22
|
China National Medical Products
Administration. Registration information of domestic new
coronavirus detection reagents. Available from: http://www.nmpa.gov.cn/WS04/CL2582/
and http://english.nmpa.gov.cn.
|
|
23
|
National Institute for Viral Disease
Control and Prevention, Chinese Center for Disease Control and
Prevention: Novel Coronavirus National Science and Technology
Resource Service System[EB/OL]. Feb 8, 2020; Available from:
http://nmdccn/nCov/en.
|
|
24
|
Guo YY, Wang K, Zhang Y, et al: Comparison
and analysis of the detection performance of six new coronavirus
nucleic acid detection reagents. Chongqing Medicine. Feb 12, 2020;
1-11. Chinese. Available from: http://kns.cnki.net/kcms/detail/50.1097.R.20200212.0900.006.html.
|
|
25
|
Espy MJ, Uhl JR, Sloan LM, Buckwalter SP,
Jones MF, Vetter EA, Yao JD, Wengenack NL, Rosenblatt JE, Cockerill
FR 3rd and Smith TF: Real-time PCR in clinical microbiology:
Applications for routine laboratory testing. Clin Microbiol Rev.
19:165–256. 2006.PubMed/NCBI View Article : Google Scholar
|
|
26
|
Kaul KL: Laboratories and pandemic
preparedness: A framework for collaboration and oversight. J Mol
Diagn. 22:841–843. 2020.PubMed/NCBI View Article : Google Scholar
|
|
27
|
Zhang W, Du RH, Li B, Zheng XS, Yang XL,
Hu B, Wang YY, Xiao GF, Yan B, Shi ZL and Zhou P: Molecular and
serological investigation of 2019-nCoV infected patients:
Implication of multiple shedding routes. Emerg Microbes Infect.
9:386–389. 2020.PubMed/NCBI View Article : Google Scholar
|
|
28
|
Armstrong GL, MacCannell DR, Taylor J,
Carleton HA, Neuhaus EB, Bradbury RS, Posey JE and Gwinn M:
Pathogen genomics in public health. N Engl J Med. 381:2569–2580.
2019.PubMed/NCBI View Article : Google Scholar
|
|
29
|
MGI: Rush to aid the epidemic! MGI's
ultra-high-throughput sequencing system DNBSEQ-T7 facilitates rapid
diagnosis of suspected patients with new coronavirus pneumonia. Jan
27, 2020; Available from: https://www.mgitech.cn/news/213/.
|
|
30
|
Bowden R, Davies RW, Heger A, Pagnamenta
AT, de Cesare M, Oikkonen LE, Parkes D, Freeman C, Dhalla F, Patel
SY, et al: Sequencing of human genomes with nanopore technology.
Nat Commun. 10(1869)2019.PubMed/NCBI View Article : Google Scholar
|
|
31
|
van Dijk EL, Jaszczyszyn Y, Naquin D and
Thermes C: The third revolution in sequencing technology. Trends
Genet. 34:666–681. 2018.PubMed/NCBI View Article : Google Scholar
|
|
32
|
The CPC Hangzhou Municipal Committee: Two
major scientific and technological projects for epidemic prevention
and control have made positive progress! Feb 12, 2020. Available
from:
http://wsjkwhangzhougovcn/art/2020/2/18/art_1665346_41937016html.
|
|
33
|
Tang X, Wu C, Li X, Song Y, Yao X, Wu X,
Duan Y, Zhang H, Wang Y, Qian Z, et al: On the origin and
continuing evolution of SARS-CoV-2. Nat Sci Rev. 7:1012–1023.
2020.
|
|
34
|
Quainoo S, Coolen JPM, van Hijum SAFT,
Huynen MA, Melchers WJG, van Schaik W and Wertheim HFL:
Whole-genome sequencing of bacterial pathogens: The future of
nosocomial outbreak analysis. Clin Microbiol Rev. 30:1015–1063.
2017.PubMed/NCBI View Article : Google Scholar
|
|
35
|
Notomi T, Okayama H, Masubuchi H, Yonekawa
T, Watanabe K, Amino N and Hase T: Loop-mediated isothermal
amplification of DNA. Nucleic Acids Res. 28(E63)2000.PubMed/NCBI View Article : Google Scholar
|
|
36
|
Shirato K, Yano T, Senba S, Akachi S,
Kobayashi T, Nishinaka T, Notomi T and Matsuyama S: Detection of
Middle East respiratory syndrome coronavirus using reverse
transcription loop-mediated isothermal amplification (RT-LAMP).
Virol J. 11(139)2014.PubMed/NCBI View Article : Google Scholar
|
|
37
|
Hong TC, Mai QL, Cuong DV, Parida M,
Minekawa H, Notomi T, Hasebe F and Morita K: Development and
evaluation of a novel loop-mediated isothermal amplification method
for rapid detection of severe acute respiratory syndrome
coronavirus. J Clin Microbiol. 42:1956–1961. 2004.PubMed/NCBI View Article : Google Scholar
|
|
38
|
Shirato K, Semba S, El-Kafrawy SA, Hassan
AM, Tolah AM, Takayama I, Kageyama T, Notomi T, Kamitani W,
Matsuyama S and Azhar EI: Development of fluorescent reverse
transcription loop-mediated isothermal amplification (RT-LAMP)
using quenching probes for the detection of the Middle East
respiratory syndrome coronavirus. J Virol Methods. 258:41–48.
2018.PubMed/NCBI View Article : Google Scholar
|
|
39
|
Xu C, Wang H, Jin H, Feng N, Zheng X, Cao
Z, Li L, Wang J, Yan F, Wang L, et al: Visual detection of Ebola
virus using reverse transcription loop-mediated isothermal
amplification combined with nucleic acid strip detection. Arch
Virol. 161:1125–1133. 2016.PubMed/NCBI View Article : Google Scholar
|
|
40
|
Yu L, Wu S, Hao X, Dong X, Mao L,
Pelechano V, Chen WH and Yin X: Rapid detection of COVID-19
coronavirus using a reverse transcriptional loop-mediated
isothermal amplification (RT-LAMP) diagnostic platform. Clin Chem.
66:975–977. 2020.PubMed/NCBI View Article : Google Scholar
|
|
41
|
Lamb LE, Bartolone SN, Ward E and
Chancellor MB: Rapid detection of novel coronavirus/severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2) by reverse
transcription-loop-mediated isothermal amplification. PLoS One.
15(e0234682)2020.PubMed/NCBI View Article : Google Scholar
|
|
42
|
Li Y, Fan P, Zhou S and Zhang L:
Loop-mediated isothermal amplification (LAMP): A novel rapid
detection platform for pathogens. Microb Pathog. 107:54–61.
2017.PubMed/NCBI View Article : Google Scholar
|
|
43
|
Piepenburg O, Williams CH, Stemple DL and
Armes NA: DNA detection using recombination proteins. PLoS Biol.
4(e204)2006.PubMed/NCBI View Article : Google Scholar
|
|
44
|
National Institute for Viral Disease
Control and Prevention, Chinese Center For Disease Control and
Prevention. New Coronavirus (2019-nCoV) nucleic acid isothermal
amplification rapid detection kit completed 3 clinical evaluations.
Available from: http://ivdc.chinacdc.cn/kyjz/202002/t20200207_212372.html.
|
|
45
|
Karas M, Glückmann M and Schäfer J:
Ionization in matrix-assisted laser desorption/ionization: Singly
charged molecular ions are the lucky survivors. J Mass Spectrom.
35:1–12. 2000.PubMed/NCBI View Article : Google Scholar
|
|
46
|
Gao X, Tan BH, Sugrue RJ and Tang K: MALDI
mass spectrometry for nucleic acid analysis. Top Curr Chem.
331:55–77. 2013.PubMed/NCBI View Article : Google Scholar
|
|
47
|
Jang KS and Kim YH: Rapid and robust
MALDI-TOF MS techniques for microbial identification: A brief
overview of their diverse applications. J Microbiol. 56:209–216.
2018.PubMed/NCBI View Article : Google Scholar
|
|
48
|
Li M, Jiang XW, Liang ZK, et al:
Application Value of Common Molecular Diagnostic Techniques in
Detection of New Coronavirus. Chinese Journal of Clinical
Laboratory. 2020. Author's manuscript available at https://www.ddm360.com/apparticle/detail/1022.
|
|
49
|
Gao Y, Huang X, Zhu Y and Lv Z: A brief
review of monoclonal antibody technology and its representative
applications in immunoassays. J Immunoassay Immunochem. 39:351–364.
2018.PubMed/NCBI View Article : Google Scholar
|
|
50
|
Huang C, Wen T, Shi FJ, Zeng XY and Jiao
YJ: Rapid detection of IgM antibodies against the SARS-CoV-2 virus
via colloidal gold nanoparticle-based lateral-flow assay. ACS
Omega. 5:12550–12556. 2020.PubMed/NCBI View Article : Google Scholar
|
|
51
|
Nuccetelli M, Pieri M, Grelli S, Ciotti M,
Miano R, Andreoni M and Bernardini S: SARS-CoV-2 infection
serology: A useful tool to overcome lockdown? Cell Death Discov.
6(38)2020.PubMed/NCBI View Article : Google Scholar
|
|
52
|
Lippi G, Salvagno GL, Pegoraro M,
Militello V, Caloi C, Peretti A, Gaino S, Bassi A, Bovo C and Lo
Cascio G: Assessment of immune response to SARS-CoV-2 with fully
automated MAGLUMI 2019-nCoV IgG and IgM chemiluminescence
immunoassays. Clin Chem Lab Med. 58:1156–1159. 2020.PubMed/NCBI View Article : Google Scholar
|
|
53
|
Padoan A, Cosma C, Sciacovelli L, Faggian
D and Plebani M: Analytical performances of a chemiluminescence
immunoassay for SARS-CoV-2 IgM/IgG and antibody kinetics. Clin Chem
Lab Med. 58:1081–1088. 2020.PubMed/NCBI View Article : Google Scholar
|
|
54
|
Aydin S: A short history, principles, and
types of ELISA, and our laboratory experience with peptide/protein
analyses using ELISA. Peptides. 72:4–15. 2015.PubMed/NCBI View Article : Google Scholar
|
|
55
|
Kong D, Liu L, Song S, Suryoprabowo S, Li
A, Kuang H, Wang L and Xu C: A gold nanoparticle-based
semi-quantitative and quantitative ultrasensitive paper sensor for
the detection of twenty mycotoxins. Nanoscale. 8:5245–5253.
2016.PubMed/NCBI View Article : Google Scholar
|
|
56
|
Wu HS, Chiu SC, Tseng TC, Lin SF, Lin JH,
Hsu YH, Wang MC, Lin TL, Yang WZ, Ferng TL, et al: Serologic and
molecular biologic methods for SARS-associated coronavirus
infection, Taiwan. Emerg Infect Dis. 10:304–310. 2004.PubMed/NCBI View Article : Google Scholar
|
|
57
|
Gan SD and Patel KR: Enzyme immunoassay
and enzyme-linked immunosorbent assay. J Invest Dermatol.
133(e12)2013.PubMed/NCBI View Article : Google Scholar
|
|
58
|
Seo G, Lee G, Kim MJ, Baek SH, Choi M, Ku
KB, Lee CS, Jun S, Park D, Kim HG, et al: Rapid detection of
COVID-19 causative virus (SARS-CoV-2) in human nasopharyngeal swab
specimens using field-effect transistor-based biosensor. ACS Nano.
14:5135–5142. 2020.PubMed/NCBI View Article : Google Scholar
|
|
59
|
Lee CY, Lin RT, Renia L and Ng LF:
Serological approaches for COVID-19: epidemiologic perspective on
surveillance and control. Front Immunol. 11(879)2020.PubMed/NCBI View Article : Google Scholar
|
|
60
|
Chinadevelopment. Tianjin University and
company jointly develop new kits to quickly detect new coronavirus
in 15 minutes. 2020.02.10. Available from: http://www.chinadevelopment.com.cn/sh/2020/0210/1607218.shtml.
|
|
61
|
Xi'an Science and Technology Bureau, Xi'an
Foreign Experts Bureau. Xi'an Jinci Nanobiology has developed a new
detection reagent for coronavirus. 2020.02.19. Available from:
http://xakj.xa.gov.cn/kjdt/mtbd/5e3fc58d65cbd812356eb239.html.
|
|
62
|
Bao L, Deng W and Gao H: Reinfection could
not occur in SARS-CoV-2 infected rhesus macaques. medRxiv. DOI.
10.1101/2020.03.13.990226. Author's manuscript available at
https://www.biorxiv.org/content/10.1101/2020.03.13.990226v1.full.pdf.
|
|
63
|
Deng W, Bao L, Gao H, Xiang Z, Qu Y, Song
Z, Gong S, Liu J, Liu J, Yu P, et al: Rhesus macaques can be
effectively infected with SARS-CoV-2 via ocular conjunctival route.
bioRxiv.2020.
|
|
64
|
Porte L, Legarraga P, Vollrath V, Aguilera
X, Munita JM, Araos R, Pizarro G, Vial P, Iruretagoyena M, Dittrich
S and Weitzel T: Evaluation of novel antigen-based rapid detection
test for the diagnosis of SARS-CoV-2 in respiratory samples. Int J
Infect Dis: Jun 1, 2020 (Epub ahead of print). doi:
10.1016/j.ijid.2020.05.098.
|
|
65
|
Theel ES, Slev P, Wheeler S, Couturier MR,
Wong SJ and Kadkhoda K: The role of antibody testing for
SARS-CoV-2: Is there one? J Clin Microbiol.
58(e00797)2020.PubMed/NCBI View Article : Google Scholar
|
|
66
|
Sheridan C: Fast, portable tests come
online to curb coronavirus pandemic. Nat Biotechnol. 38:515–518.
2020.PubMed/NCBI View Article : Google Scholar
|
|
67
|
Li Z, Yi Y, Luo X, Xiong N, Liu Y, Li S,
Sun R, Wang Y, Hu B, Chen W, et al: Development and clinical
application of a rapid IgM-IgG combined antibody test for
SARS-CoV-2 infection diagnosis. J Med Virol: Feb 27, 2020 (Epub
ahead of print). doi: 10.1002/jmv.25727. Online ahead of print.
|
|
68
|
Jacofsky D, Jacofsky EM and Jacofsky M:
Understanding antibody testing for COVID-19. J Arthroplasty. 35
(7S):S74–S81. 2020.PubMed/NCBI View Article : Google Scholar
|
|
69
|
Shu H, Wang S, Ruan S, Wang Y, Zhang J,
Yuan Y, Liu H, Wu Y, Li R, Pan S, et al: Dynamic changes of
antibodies to SARS-CoV-2 in COVID-19 patients at early stage of
outbreak. Virol Sin: Jul 27, 2020 (Epub ahead of print). doi:
10.1007/s12250-020-00268-5.
|
|
70
|
Cai XF, Chen J, Li Hu J, Long QX, Deng HJ,
Liu P, Fan K, Liao P, Liu BZ, Wu GC, et al: A peptide-based
magnetic chemiluminescence enzyme immunoassay for serological
diagnosis of coronavirus disease 2019. J Infect Dis. 222:189–193.
2020.PubMed/NCBI View Article : Google Scholar
|
|
71
|
Lassaunière R, Frische A, Harboe ZB,
Nielsen AC, Fomsgaard A, Krogfelt KA and Jørgensen CS: Evaluation
of nine commercial SARS-CoV-2 immunoassays. Available at:
https://www.medrxiv.org/content/medrxiv/early/2020/02/25/2020.02.22.20026617.full.pdf.
|
|
72
|
Xu WZ, Li J, He XY, Zhang C, Mei S, Li C,
Li Y, Cheng S and Zhang P: The diagnostic value of joint detection
of serum IgM and IgG antibodies to 2019-nCoV in 2019-nCoV
infection. Chin J Lab Med. 43:230–233. 2020.
|
|
73
|
MedBoard: Test Products and New Approvals.
Available from: https://www.medboardco.com/covid-19-products/.
|
|
74
|
Ministry of Science and Technology of the
People's Republic of China. Xiamen University jointly developed the
first rapid detection kit for 2019-nCoV antibody.2020. Available
from:
http://wwwsafeagovcn/dfkj/fj/zxdt/202002/t20200224_151881htm.
|
|
75
|
Okba NMA, Müller MA, Li W, Wang C,
GeurtsvanKessel CH, Corman VM, Lamers MM, Sikkema RS, de Bruin E,
Chandler FD, et al: Severe acute respiratory syndrome coronavirus
2-specific antibody responses in coronavirus disease patients.
Emerg Infect Dis. 26:1478–1488. 2020.PubMed/NCBI View Article : Google Scholar
|
|
76
|
Cutts FT and Hanson M: Seroepidemiology:
An underused tool for designing and monitoring vaccination
programmes in low- and middle-income countries. Trop Med Int
Health. 21:1086–1098. 2016.PubMed/NCBI View Article : Google Scholar
|
|
77
|
Chan JF, Yip CC, To KK, Tang TH, Wong SC,
Leung KH, Fung AY, Ng AC, Zou Z, Tsoi HW, et al: Improved molecular
diagnosis of COVID-19 by the novel, highly sensitive and specific
COVID-19-RdRp/Hel real-time reverse transcription-PCR assay
validated in vitro and with clinical specimens. J Clin Microbiol.
58:e00310–20. 2020.PubMed/NCBI View Article : Google Scholar
|
|
78
|
Tahmasebi S, Khosh E and Esmaeilzadeh A:
The outlook for diagnostic purposes of the 2019-novel coronavirus
disease. J Cell Physiol: May 26, 2020 (Epub ahead of print). doi:
10.1002/jcp.29804.
|
|
79
|
Yan Y, Chang L and Wang L: Laboratory
testing of SARS-CoV, MERS-CoV, and SARS-CoV-2 (2019-nCoV): Current
status, challenges, and countermeasures. Rev Med Virol.
30(e2106)2020.PubMed/NCBI View Article : Google Scholar
|
|
80
|
Hata A, Katayama H, Kitajima M,
Visvanathan C, Nol C and Furumai H: Validation of internal controls
for extraction and amplification of nucleic acids from enteric
viruses in water samples. Appl Environ Microbiol. 77:4336–4343.
2011.PubMed/NCBI View Article : Google Scholar
|
|
81
|
Tahamtan A and Ardebili A: Real-time
RT-PCR in COVID-19 detection: Issues affecting the results. Expert
Rev Mol Diagn. 20:453–454. 2020.PubMed/NCBI View Article : Google Scholar
|
|
82
|
Nauwelaers D, Vijgen L, Atkinson C, Todd
A, Geretti AM, Van Ranst M and Stuyver L: Development of a
real-time multiplex RSV detection assay for difficult respiratory
samples, using ultrasone waves and MNAzyme technology. J Clin
Virol. 46:238–243. 2009.PubMed/NCBI View Article : Google Scholar
|
|
83
|
Toms D, Li J and Cai HY: Evaluation of WHO
listed COVID-19 qPCR primers and probe in silico with 375
SERS-CoV-2 full genome sequences. medRxiv: April 28, 2020 (Epub
ahead of print). doi: https://doi.org/10.1101/2020.04.22.20075697.
|
|
84
|
Yan C, Cui J, Huang L, Du B, Chen L, Xue
G, Li S, Zhang W, Zhao L, Sun Y, et al: Rapid and visual detection
of 2019 novel coronavirus (SARS-CoV-2) by a reverse transcription
loop-mediated isothermal amplification assay. Clin Microbiol
Infect. 26:773–779. 2020.PubMed/NCBI View Article : Google Scholar
|
|
85
|
Vogelstein B and Kinzler KW: Digital PCR.
Proc Natl Acad Sci USA. 96:9236–9241. 1999.PubMed/NCBI View Article : Google Scholar
|
|
86
|
Sykes PJ, Neoh SH, Brisco MJ, Hughes E,
Condon J and Morley AA: Quantitation of targets for PCR by use of
limiting dilution. Biotechniques. 13:444–449. 1992.PubMed/NCBI
|
|
87
|
Li H, Bai R, Zhao Z, Tao L, Ma M, Ji Z,
Jian M, Ding Z, Dai X, Bao F and Liu A: Application of droplet
digital PCR to detect the pathogens of infectious diseases. Biosci
Rep. 38(BSR20181170)2018.PubMed/NCBI View Article : Google Scholar
|
|
88
|
Magro L, Jacquelin B, Escadafal C,
Garneret P, Kwasiborski A, Manuguerra JC, Monti F, Sakuntabhai A,
Vanhomwegen J, Lafaye P and Tabeling P: Paper-based RNA detection
and multiplexed analysis for Ebola virus diagnostics. Sci Rep.
7(1347)2017.PubMed/NCBI View Article : Google Scholar
|
|
89
|
Khan AH, Shakeel S, Hooda K, Siddiqui K
and Jafri L: Best practices in the implementation of a point of
care testing program: Experience from a tertiary care hospital in a
developing country. EJIFCC. 30:288–302. 2019.PubMed/NCBI
|
|
90
|
Park S, Zhang Y, Lin S, Wang TH and Yang
S: Advances in microfluidic PCR for point-of-care infectious
disease diagnostics. Biotechnol Adv. 29:830–839. 2011.PubMed/NCBI View Article : Google Scholar
|
|
91
|
Basile K, Kok J and Dwyer DE:
Point-of-care diagnostics for respiratory viral infections. Expert
Rev Mol Diagn. 18:75–83. 2018.PubMed/NCBI View Article : Google Scholar
|
|
92
|
Broadhurst MJ, Brooks TJ and Pollock NR:
Diagnosis of Ebola virus disease: Past, Present, and Future. Clin
Microbiol Rev. 29:773–793. 2016.PubMed/NCBI View Article : Google Scholar
|
|
93
|
Shorten RJ, Brown CS, Jacobs M, Rattenbury
S, Simpson AJ and Mepham S: Diagnostics in Ebola virus disease in
resource-rich and resource-limited settings. PLoS Negl Trop Dis.
10(e0004948)2016.PubMed/NCBI View Article : Google Scholar
|
|
94
|
Gootenberg JS, Abudayyeh OO, Lee JW,
Essletzbichler P, Dy AJ, Joung J, Verdine V, Donghia N, Daringer
NM, Freije CA, et al: Nucleic acid detection with
CRISPR-Cas13a/C2c2. Science. 356:438–442. 2017.PubMed/NCBI View Article : Google Scholar
|
|
95
|
Kellner MJ, Koob JG, Gootenberg JS,
Abudayyeh OO and Zhang F: SHERLOCK: Nucleic acid detection with
CRISPR nucleases. Nat Protoc. 14:2986–3012. 2019.PubMed/NCBI View Article : Google Scholar
|
|
96
|
Zhang F, Abudayyeh OO and Gootenberg JS: A
protocol for detection of COVID-19 using CRISPR diagnostics
(v20200321) 2020. Available from: https://www.broadinstitute.org/files/publications/special/COVID-19%20detection%20(updated).pdf.
|
|
97
|
Gu W, Miller S and Chiu CY: Clinical
metagenomic next-generation sequencing for pathogen detection. Annu
Rev Pathol. 14:319–338. 2019.PubMed/NCBI View Article : Google Scholar
|
|
98
|
Chiu CY and Miller SA: Clinical
metagenomics. Nat Rev Genet. 20:341–355. 2019.PubMed/NCBI View Article : Google Scholar
|
