Transcription factor PU.1 and immune cell differentiation (Review)

  • Authors:
    • Guanglan Li
    • Wenke Hao
    • Wenxue Hu
  • View Affiliations

  • Published online on: October 21, 2020     https://doi.org/10.3892/ijmm.2020.4763
  • Pages: 1943-1950
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Abstract

The transcription factor PU.1, an important member of the ETS family, plays a significant role in the differentiation of immune cells, which include macrophages, neutrophils, dendritic cells, T lymphoid cells, B lymphoid cells and so on. Immune cells are involved in the occurrence and development of diseases, including inflammatory diseases, neoplastic diseases and immune diseases. Therefore, it is particularly crucial to elucidate the roles and mechanisms of PU.1 in immune cells. The elucidation of these mechanisms may lead to the development of more effective therapeutic strategies for the treatment of inflammatory diseases and immune‑mediated diseases mediated by various immune cells. With the development of molecular biology, the mechanisms of PU.1 in immune cell differentiation have been further explained. Different levels of PU.1 expression determine the type of immune cell differentiation. PU.1 expression is increased during granulocyte and macrophage differentiation, while it is decreased during T lymphocyte and B lymphocyte differentiation. The present study reviews and discusses the effects of the transcription factor PU.1 on immune cell differentiation.

1. Introduction

PU.1 is a member of the erythroblast transformation specific (ETS) transcription factor family. All ETS family members have a common DNA binding sequence of approximately 85 amino acids, that is the ETS domain. The sequences are highly conserved, and can be recognized by these proteins that contain the core motif 5′-GGAA/T-3′ (1). However, the binding of individual ETS proteins also has its characteristics owing to the existence of the flanking sequences.

PU.1 is coded by the Spi-1 gene; Spi-1 was discovered by Moreau-Gachelin et al in 1988. Spi-1 is a putative oncogene that was isolated from a murine erythrocyte leukemia induced by the acute leukemogenic retrovirus spleen focus-forming virus (SFFV) (2).

PU.1 is a vital transcriptional regulator of hematopoietic stem cell differentiation (3); granulocytes, macrophages and lymphocytes are crucial immune cells, and they play important roles in immune system. They are involved in a serious of diseases, including inflammatory diseases, neoplastic diseases and immune diseases, such as myeloma, leukemia, systemic lupus erythematosus (SLE) and rheumatoid arthritis (RA) (4-8). Therefore, it is particularly crucial to understand the mechanisms of PU.1 in immune cells. The present study reviews the advancements made in the elucidation of the mechanisms of the transcription factor, PU.1, in immune cell differentiation.

2. Expression of PU.1 in immune cells

PU.1 is expressed in a tissue-specific manner and the different levels of PU.1 expression determine the type of hematopoietic stem cell differentiation (9). Thus, precise levels of PU.1 are crucial for differentiation into distinct blood lineages, and even modest decreases in its expression can lead to leukemogenesis. It would be of interest to determine the exact mechanisms through which target genes sense different PU.1 levels. Pospíšil et al used myeloid progenitors encoding inducible PU.1 transgene. They found that high levels of PU.1 produced macrophages, while intermediate levels of PU.1 induced differentiation into granulocyte-like cells (10). Moreover, at intermediate concentrations, PU.1 bound to high affinity binding sites in several enhancers of granulocyte genes, resulting in their successive interaction, leading to transcriptional activation (10). Nutt et al found that the expression of PU.1 was silenced in erythroid cells, but elevated in macrophages, with a sufficiently lower level in committed B cells (11). In neutrophils, PU.1 expression was found at moderately high levels. As for dendritic cells (DCs), PU.1 was expressed in all DC subsets, with a high amount of PU.1 in myeloid DCs. In comparison, plasmacytoid DCs (pDCs) characteristically expressed a low level (11). As regards T cells, some studies have found that PU.1 is decreased during T cell lineage differentiation (9,12,13). Thus, PU.1 expression is increased during granulocyte and macrophage differentiation, while it is decreased during erythrocyte, T lymphocyte and B lymphocyte differentiation (9).

In cells of the immune system, PU.1 can activate a number of factors, such as chemokines, cytokines and cytokine receptors that are significant for immune cell differentiation and function, including cytokine receptors, such as macrophage colony stimulating factor receptor (M-CSFR), granulocyte colony stimulating factor receptor (G-CSFR), granulocyte-macrophage colony stimulating factor receptor (GM-CSFR), interleukin 3 receptor (IL-3R), FcγR, cytokine CD11b and chemokines, such as CCL-22 (9,14). The expression of PU.1 in immune cells is illustrated in Fig. 1.

3. Regulatory mechanisms of PU.1

PU.1 has several domains that are important for PU.1 to regulate immune cell differentiation. One domain is the ETS domain of 85 amino acids, which is located near the C-terminus of the protein. It is the highly conserved DNA-binding sequence that recognizes the sequence 5′-GGAA/T-3′. Other domains within PU.1 include a glutamine-rich domain and acidic residues near the N-terminal half of the protein, which are indispensable for transactivation, and a central proline, glutamic acid, serine and threonine (PEST) domain that is involved in the interaction between PU.1 and other transcription factors (15).

Furthermore, PU.1 regulates gene expression through binding to consensus sequences, not only as a monomer but also through its interaction with other transcription factors, including interferon regulatory factor (IRF)4, IRF8, C/enhanced binder protein α and β (C/EBPα and C/EBPβ) and c-Jun (16-18). However, in addition to chaperone molecules, PU.1 also has antagonistic molecules. For example, the GATA family of transcription factors can antagonize the activity of PU.1 by interacting with it. Initially, this antagonism was proposed to occur through the prevention of DNA binding (19). However, some studies have revealed that PU.1 and GATA-1 co-exist on DNA. The repression of PU.1 activity appears to involve altering the chromatin structure around the binding site (20-22).

4. Role of PU.1 in macrophage differentiation

In differentiated macrophages, two major phenotypes have been identified, which are of significance to the occurrence and progression of inflammation. One is a pro-inflammatory phenotype that is activated with lipopolysaccharide (LPS), either with or without interferon-γ (known as M1 or classically activated macrophages). The other is an anti-inflammatory phenotype that is activated with IL-4 and IL-13 (known as M2 or alternatively activated macrophages). The two macrophage phenotypes have a very different metabolic profile (23,24).

M1 macrophages are identified as CD64(+)CD80(+), while M2 macrophage are identified as CD11b(+)CD209(+). Polarized M1 macrophages secrete IP-10, IFN-γ, IL-8, TNF-α, IL-1β and RANTES, whereas M2 macrophages secrete IL-13, CCL17 and CCL18 (20). Moreover, M2 macrophages are characterized by an abundant expression of CD163, arginase, mannose receptor (MR/CD206), chitinase-like molecules (Ym-1/2) and resistin-like molecule α (RELMα/Fizz-1) (25).

Furthermore, apart from the peroxisome proliferator-activated receptor (PPAR), Krüppel-like factor (KLF), IRF, signal transducer and activator of transcription (STAT), nuclear factor (NF)-κB and hypoxia-inducible factor (HIF) families, and microRNAs (miRNAs or miRs) (26), PU.1 is also a critical molecule in macrophage differentiation. PU.1 plays a key role not only in M1 macrophage differentiation, but also M2 macrophage differentiation (27-30). Karpurapu et al identified a direct link between PU.1 and inflammation by establishing a bone marrow chimera model with functional PU.1 knockout phenotype in mature macrophages (28). In these mice, the expression of NF-κB activation, that mediates inflammation, was markedly attenuated in different organs compared with the wild-type (WT) mice. These findings indicated that PU.1 is required for LPS-induced classical macrophage activation. After macrophages are fully differentiated, PU.1 is also important for the survival of mature macrophages (28). Qian et al identified that PU.1 can promote alternative macrophage polarization and induce the expression of the pro-allergic factors, Ym-1 and Fizz-1, which play a role in the development of allergic inflammation (29).

The regulatory mechanisms of PU.1 in macrophage differentiation involve the prevention of polycomb repressive complex 2 (PRC2)-mediated heterochromatin formation at macrophage-specific genes, the activation of pre-existing and de novo myeloid enhancers and cell cycle arrest (30-32). E2F transcription factor 1 (E2F1) has been described to regulate genes encoding enzymes involved in lipid anabolism to promote cell cycle progression (33). However, the E2F1 mRNA transcript levels can be repressed by miR-233, that is induced by PU.1. In summary, the transcription factor, PU.1, is essential for the coordination of macrophage differentiation with cell cycle arrest (32).

Pu.1 regulates macrophage differentiation not only as a monomer, but also through its interaction with other transcription factors, such as IRF4 (34) and c-Jun (35). Nevertheless, the levels of PU.1 can be repressed; miR-150-5p, miR-150-5p directly interact and suppresses PU.1 transcript sequences. The overexpression of miR-150-5p can suppress the PU.1 levels which affects the polarization of macrophages (36).

5. PU.1 acts as a safeguard to ensure an appropriate neutrophil immune response

As the master immune cells in peripheral blood, neutrophils are the first line of defense against fungal infections and bacterial infections (37). Neutrophils are also important regulators of the adaptive immune system, as they can release immune-activating or -suppressing cytokines (38).

PU.1 is recognized to be involved in neutrophil differentiation. However, the exact regulatory mechanisms involved remain unknown. Some studies have found that cell cycle arrest may play a role (39,40). PU.1 can activate microtubule-associated protein 1S (MAP1S) and death-associated protein kinase 2 (DAPK2) transcription by binding to their promoter. MAP1S with a link to autophagy (a cellular recycling pathway) is induced during neutrophil differentiation (39). DAPK2 (also known as DRP-1) is crucial for the cell cycle arrest in neutrophil terminal differentiation and belongs to a family of proapoptotic Ca2+/calmodulin-regulated serine/threonine kinases and activates programmed cell death (40,41). The promotion of nuclear segmentation is also a mechanism through which PU.1 regulates neutrophil differentiation. PU.1 can control the transcription of the gene encoding lamin B receptor (LBR), an inner nuclear membrane protein, which is required for neutrophil nuclear segmentation (42). Furthermore, the PU.1/Zbtb11/Tp53 pathway is a regulator of neutrophil development (43). PU.1 is involved in neutrophil differentiation by directly activating the transcription of HK3 and MIR29B (44,45). In summary, PU.1 is a master transcription factor in neutrophil differentiation. However, when inappropriately activated, a prolonged immune response of neutrophils can lead to collateral tissue excessive damage and contribute to autoimmunity. Therefore, a feedback inhibitory response is required to weaken the activity of neutrophils. As an essential transcription factor in neutrophil differentiation, PU.1 can also suppress neutrophil activation via the regulation of the inflammatory epigenome of neutrophils. PU.1 inhibits enhancer accessibility via the recruitment of histone deacetylases (HDACs), thereby impeding the AP-1 transcription factor JUNB (46) that represents a key mediator of the inflammatory activation from entering chromatin (47).

Taken together, PU.1 acts as a safeguard to ensure an appropriate neutrophil immune response. It controls the simultaneous activation or inhibition in neutrophils, promoting microbial sensing and inhibiting mobilization. PU.1 exerts an effect not only on the expression of neutrophil differentiation genes, but also on genes controlling infection and inflammation (47).

6. Expression of PU.1 in all dendritic cells

DCs are able to recognize danger signals and undergo major alterations in gene expression to produce mediators, such as chemokines and cytokines. DCs also have the ability to degrade proteins sampled from the environment, thereby presenting peptide epitopes in the context of MHCI or MHCII, thereby stimulating T cells to initiate adaptive immunity (23). Therefore, DCs are pivotal in binding between innate and adaptive immunity. Steady-state DC subsets are categorized into two major lineages: pDCs and conventional DCs (cDCs). pDCs are characterized by the production of high levels of type I IFN; cDCs have two phenotypically and functionally distinct subsets: cDC1s and cDC2s (48,49).

PU.1 is required for the differentiation of all DCs. cDCs express high levels of PU.1. By contrast, pDCs characteristically express a low level of PU.1 (50). DC differentiation is related to the demethylation (51) and phosphorylation of PU.1. PU.1 activity can be induced through the phosphorylation of its transactivation domain (TAD) by PKCδ to promote DC differentiation (52).

PU.1 is required for DC identity. For example, the leukocyte integrin, CD11c (encoded by ITGAX) is well known as a specific hallmark of DCs, which is expressed by all DC subsets. PU.1 is involved in the transcription and subsequent protein expression of CD11c by transactivating the ITGAX promoter via direct binding to the cis-element on the gene in DCs (53,54).

PU.1 is required for DC function, and plays a key role in the expression of several genes that are significant for the function of DCs, including fms-like tyrosine kinase 3 (Flt3), CD80, CD86, OX40L, retinaldehyde dehydrogenase 2 (RALDH2) and major histocompatibility complex class II (MHCII) (55-58). PU.1 regulates the expression of CD80 and CD86 through binding via the upper promoter and their promoters (55). PU.1 regulates the expression of OX40L through specifically binding to the proximal region of the OX40L promoter and the PU.1-binding is constitutive, which is not affected by the TLR ligand-dependent maturation of DCs (56). PU.1 regulates the expression of RALDH2 that plays a crucial role in the development of regulatory T cells in mesenteric lymph nodes through binding to the RALDH2 promoter (57). The expression of MHCII is regulated by a cofactor termed class II transactivator (CIITA) that has three distinct promoters, pI, pIII and pIV. In cDCs, pI promoter mainly functions. PU.1 regulates CIITA-pI as a monomer, but not as a heterodimer. It not only functions as a transcription factor, but also regulates histone acetylation in the promoter region of CIITA-pI (58). In pDCs, the pIII promoter mainly functions. PU.1 plays a role by binding to Tts-motifs in the pIII in pDCs (59).

However, some studies have demonstrated that PU.1 may be recognized as a bifunctional regulator of DC functions (60,61). PU.1 mainly acts as a transcriptional activator for the expression of DC-characteristic gene, while PU.1 acts partly as a transcriptional suppressor for the expression of non-characteristic gene, such as Th2 cytokines including IL-13, IL-5 in bone marrow-derived DCs. PU.1 represses Th2 cytokines expression by suppressing the expression of GATA3, that is a key regulator of Th2 differentiations (60).

7. Regulatory effects of PU.1 on gene expression in early T cells

During T lymphocytes, cells undergo at least three major transcription factor action stages before they are fully programmed, including the earliest 'early T cell precursors' (or Kit-high double-negative DN1), DN2 and DN3. The first transformation, commitment, separates the DN1 and DN2a phases from the DN2b and DN3 phases. This is when initially, multipotent precursors lose access to other options and become fully committed to the fate of the T cell. One factor that accounts for the majority of all open regulatory sites in the pre-commitment (DN1 and DN2a) cell genome is PU.1 (62). However, in the majority of pro-T cells, PU.1 collaborators, such as IRF4, IRF8 and C/EBPα are lacking (63,64), with the exception of SATB homeobox 1 (Satb1) and Runt-related transcription factor 1 (Runx1). Satb1 and Runx1 interact with PU.1 in early T cells (65).

PU.1 regulates gene expression in early T cells positively and negatively via two distinct mechanisms: It not only opens chromatin and nucleates with transcriptional co-factors, such as Satb1 and Runx1 at its binding sites to form cooperative complexes, but also competitively redistributes its co-factors, often removing them from sites where they can regulate different genes (65,66). The function of triggering chromatin opening occurs, particularly, at a major subgroup of its non-promoter sites, in which PU.1 can rapidly induce transposase accessibility and then recruit histone acetyltransferases (67). In summary, PU.1 regulates pro-T cell expression through its effects on chromatin opening and the deployment of other factors, and a number of its negative regulations are mediated indirectly (68).

Helper T lymphocytes, including Th1, Th2, Th9 and Th17, play an important role in the immune system, while the role of PU.1 in Th9 cells has been extensively studied lately. Ramming et al found that differentiation of Th9 cells was controlled by the unique and dynamic epigenetic modifications in the promoter region of its main transcription factor, PU.1 (69). The inhibition of repressive histone methylation can induce Th9-specific PU.1 expression (69). Goswami and Kaplan demonstrated that PU.1 promoted IL-9 expression by recruiting the Gcn5 histone acetyltransferase to the IL9 locus and promoting the expression of additional genes enriched in Th9 cells (70). However, PU.1 is degraded through selective autophagy to repress Th9 cell differentiation and reduce Th9 cell-derived IL-9 production (71).

8. PU.1 is required for B cell differentiation

Naïve B cells develop into germinal center (GC) B cells and plasma cells (PC) following activation by cognate antigen in combination with signals from T helper cells and DCs (72). Therefore, the receptors through which B cells sense and respond to these signals are of particular importance for B cell differentiation. In addition, immunoglobulin class-switch recombination (CSR) is also required for early B cell differentiation into antibody-secreting plasma cells (PCs) (73).

PU.1 as a critical transcription factor of ETS family and regulates the expression of several components of the B cell receptor signaling pathway and the receptors for CD40L, Toll-like receptor (TLR) ligands and B cell-activating factor (BAFF) (74). Moreover, PU.1 also regulates the expression of genes that are involved in immunoglobulin gene rearrangement (75). Thus, PU.1 is required for gene expression during B cell differentiation.

The regulatory effects of PU.1 on cell differentiation are dependent on its DNA-binding ability and its synergism with other transcription factors, such as IRF4. PU.1 can bind to IRF4 and IRF8 at composite ETS-interferon consensus element (EICE) sites to regulate the immunoglobulin class switch, recombination and cell differentiation (76,77). The DNA-binding ability can be enhanced by the histone acetyltransferases, CBP and EP300, by mediating PU.1 acetylation (78). However, SPIC weakens the DNA-binding ability of PU.1 by binding to regulatory elements similar to PU.1 binding in pre-B cells, resulting in PU.1 translocation from these regions; Bcl-2-associated transcription factor1 (BCLAF1) is recruited to gene-regulatory elements, thus inhibiting the expression of important B developmental genes (79). In addition to SPIC, E2A also weakens the DNA-binding ability of PU.1 (80). In summary, PU.1 is required for B cell differentiation.

9. PU.1 serves as a bridge between immune cells

Immune cells are important members of the immune system, they are independent and related to each other, and PU.1 serves as a bridge between them. The concentration of the PU.1 transcription factor affects the development of myeloid/lymphoid lineage. A high level of PU.1 promotes the acquisition of myeloid cell fate at the expense of B cell differentiation. Myelopoiesis may require high levels of PU.1 to overcome the inhibition of PU.1 activity by transcription factors that promote B cell development. Rogers et al demonstrated that E2A can antagonize PU.1 activity to direct B cell development, but high levels PU.1 can direct myeloid differentiation through over-coming this antagonism (80). Furthermore, PU.1 can regulate the differentiation of T lymphocytes by promoting the function of antigen-presenting cells (APCs), including mature DCs, B cells and macrophages. For example, PU.1 regulates the gene expression of the chemokine, Ccl22, in DCs and macrophages, and Ccl22 can mediate Th2 cell development by binding to the receptor, CCR4, in Th2 cells, thus regulating the development of atopic dermatitis (AD) and asthma (14). PU.1 is transcriptional activator of the CD80, CD86 and OX40L genes in APCs, which are the co-stimulatory molecules predominantly involved in Th2 and Tfh cell differentiation (81). Taken together, different levels of PU.1 tend to differentially affect immune cell differentiation, and PU.1 in APCs is required for precise T cell stimulation and differentiation. PU.1 serves as the bridge between immune cells. The effects of the PU.1 transcription factor on immune cell differentiation are illustrated in Fig. 2.

10. Conclusion

Immune cells play an important role in the occurrence and development of a serious of diseases, including inflammatory diseases, neoplastic diseases and immune diseases. The transcription factor, PU.1, is required in immune cell differentiation. In view of the important position of PU.1 in the regulation of the immune system, the elucidation of its regulatory mechanisms in immune cells may provide new clues and may lead to the development of novel strategies with which to reduce the damage induced by inflammation to organs. This may thus lead to more effective therapeutic strategies for the treatment of inflammatory diseases and immune-mediated diseases mediated by various immune cells.

Acknowledgments

Not applicable.

Funding

The present study was supported by grants from the National Natural Science Foundation of China (no. 81700670) and Natural Science Foundation of Guangdong Province (no. 2019A1515011594).

Availability of data and materials

Not applicable.

Authors' contributions

GL, WHao and WHu contributed to the conception and design of the present review. GL contributed to the writing and drafting of the manuscript. WHao and WHu contributed to the critical revision of the manuscript for important intellectual content. All authors read and approved the final manuscript.

Ethics approval and consent to participate

Not applicable.

Patient consent for publication

Not applicable.

Competing interests

The authors declare that they have no competing interests.

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December-2020
Volume 46 Issue 6

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Li G, Hao W and Hu W: Transcription factor PU.1 and immune cell differentiation (Review). Int J Mol Med 46: 1943-1950, 2020
APA
Li, G., Hao, W., & Hu, W. (2020). Transcription factor PU.1 and immune cell differentiation (Review). International Journal of Molecular Medicine, 46, 1943-1950. https://doi.org/10.3892/ijmm.2020.4763
MLA
Li, G., Hao, W., Hu, W."Transcription factor PU.1 and immune cell differentiation (Review)". International Journal of Molecular Medicine 46.6 (2020): 1943-1950.
Chicago
Li, G., Hao, W., Hu, W."Transcription factor PU.1 and immune cell differentiation (Review)". International Journal of Molecular Medicine 46, no. 6 (2020): 1943-1950. https://doi.org/10.3892/ijmm.2020.4763