|
1
|
Siegel RL, Miller KD and Jemal A: Cancer
statistics, 2016. CA Cancer J Clin. 66:7–30. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
2
|
Reya T, Morrison SJ, Clarke MF and
Weissman IL: Stem cells, cancer, and cancer stem cells. Nature.
414:105–111. 2001. View
Article : Google Scholar : PubMed/NCBI
|
|
3
|
Liu R, Wang X, Chen GY, Dalerba P, Gurney
A, Hoey T, Sherlock G, Lewicki J, Shedden K and Clarke MF: The
prognostic role of a gene signature from tumorigenic breast-cancer
cells. N Engl J Med. 356:217–226. 2007. View Article : Google Scholar : PubMed/NCBI
|
|
4
|
Samanta D, Gilkes DM, Chaturvedi P, Xiang
L and Semenza GL: Hypoxia-inducible factors are required for
chemotherapy resistance of breast cancer stem cells. Proc Natl Acad
Sci USA. 111:E5429–E5438. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
5
|
De Los Angeles A, Ferrari F, Xi R,
Fujiwara Y, Benvenisty N, Deng H, Hochedlinger K, Jaenisch R, Lee
S, Leitch HG, et al: Hallmarks of pluripotency. Nature.
525:469–478. 2015. View Article : Google Scholar : PubMed/NCBI
|
|
6
|
Graziano A, d'Aquino R, Tirino V,
Desiderio V, Rossi A and Pirozzi G: The stem cell hypothesis in
head and neck cancer. J Cell Biochem. 103:408–412. 2008. View Article : Google Scholar
|
|
7
|
Malhotra GK, Zhao X, Band H and Band V:
Shared signaling pathways in normal and breast cancer stem cells. J
Carcinog. 10:382011. View Article : Google Scholar
|
|
8
|
El Helou R, Pinna G, Cabaud O, Wicinski J,
Bhajun R, Guyon L, Rioualen C, Finetti P, Gros A, Mari B, et al:
miR-600 acts as a bimodal switch that regulates breast cancer stem
cell fate through WNT signaling. Cell Rep. 18:2256–2268. 2017.
View Article : Google Scholar : PubMed/NCBI
|
|
9
|
Bouras T, Pal B, Vaillant F, Harburg G,
Asselin-Labat ML, Oakes SR, Lindeman GJ and Visvader JE: Notch
signaling regulates mammary stem cell function and luminal
cell-fate commitment. Cell Stem Cell. 3:429–441. 2008. View Article : Google Scholar : PubMed/NCBI
|
|
10
|
Liu S, Dontu G, Mantle ID, Patel S, Ahn
NS, Jackson KW, Suri P and Wicha MS: Hedgehog signaling and Bmi-1
regulate self-renewal of normal and malignant human mammary stem
cells. Cancer Res. 66:6063–6071. 2006. View Article : Google Scholar : PubMed/NCBI
|
|
11
|
Bertone P, Stolc V, Royce TE, Rozowsky JS,
Urban AE, Zhu X, Rinn JL, Tongprasit W, Samanta M, Weissman S, et
al: Global identification of human transcribed sequences with
genome tiling arrays. Science. 306:2242–2246. 2004. View Article : Google Scholar : PubMed/NCBI
|
|
12
|
Ponting CP, Oliver PL and Reik W:
Evolution and functions of long noncoding RNAs. Cell. 136:629–641.
2009. View Article : Google Scholar : PubMed/NCBI
|
|
13
|
Fatica A and Bozzoni I: Long non-coding
RNAs: New players in cell differentiation and development. Nat Rev
Genet. 15:7–21. 2014. View
Article : Google Scholar
|
|
14
|
Hu X, Feng Y, Zhang D, Zhao SD, Hu Z,
Greshock J, Zhang Y, Yang L, Zhong X, Wang LP, et al: A functional
genomic approach identifies FAL1 as an oncogenic long noncoding RNA
that associates with BMI1 and represses p21 expression in cancer.
Cancer Cell. 26:344–357. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
15
|
Xu C, Yang M, Tian J, Wang X and Li Z:
MALAT-1: A long non-coding RNA and its important 3′ end functional
motif in colorectal cancer metastasis. Int J Oncol. 39:169–175.
2011.PubMed/NCBI
|
|
16
|
Lin A, Li C, Xing Z, Hu Q, Liang K, Han L,
Wang C, Hawke DH, Wang S, Zhang Y, et al: The LINK-A lncRNA
activates normoxic HIF1α signalling in triple-negative breast
cancer. Nat Cell Biol. 18:213–224. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
17
|
Guttman M, Amit I, Garber M, French C, Lin
MF, Feldser D, Huarte M, Zuk O, Carey BW, Cassady JP, et al:
Chromatin signature reveals over a thousand highly conserved large
non-coding RNAs in mammals. Nature. 458:223–227. 2009. View Article : Google Scholar : PubMed/NCBI
|
|
18
|
Liu B, Sun L, Liu Q, Gong C, Yao Y, Lv X,
Lin L, Yao H, Su F, Li D, et al: A cytoplasmic NF-κB interacting
long noncoding RNA blocks IκB phosphorylation and suppresses breast
cancer metastasis. Cancer Cell. 27:370–381. 2015. View Article : Google Scholar : PubMed/NCBI
|
|
19
|
Gupta RA, Shah N, Wang KC, Kim J, Horlings
HM, Wong DJ, Tsai MC, Hung T, Argani P, Rinn JL, et al: Long
non-coding RNA HOTAIR reprograms chromatin state to promote cancer
metastasis. Nature. 464:1071–1076. 2010. View Article : Google Scholar : PubMed/NCBI
|
|
20
|
Huang J, Zhou N, Watabe K, Lu Z, Wu F, Xu
M and Mo YY: Long non-coding RNA UCA1 promotes breast tumor growth
by suppression of p27 (Kip1). Cell Death Dis. 5:e10082014.
View Article : Google Scholar : PubMed/NCBI
|
|
21
|
Mourtada-Maarabouni M, Pickard MR, Hedge
VL, Farzaneh F and Williams GT: GAS5, a non-protein-coding RNA,
controls apoptosis and is downregulated in breast cancer. Oncogene.
28:195–208. 2009. View Article : Google Scholar
|
|
22
|
Yan N, Xu L, Wu X, Zhang L, Fei X, Cao Y
and Zhang F: GSKJ4, an H3K27me3 demethylase inhibitor, effectively
suppresses the breast cancer stem cells. Exp Cell Res. 359:405–414.
2017. View Article : Google Scholar : PubMed/NCBI
|
|
23
|
Zhang X, Wu D, Chen L, Li X, Yang J, Fan
D, Dong T, Liu M, Tan P, Xu J, et al: RAID: A comprehensive
resource for human RNA-associated (RNA-RNA/RNA-protein)
interaction. RNA. 20:989–993. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
24
|
Pujana MA, Han JD, Starita LM, Stevens KN,
Tewari M, Ahn JS, Rennert G, Moreno V, Kirchhoff T, Gold B, et al:
Network modeling links breast cancer susceptibility and centrosome
dysfunction. Nat Genet. 39:1338–1349. 2007. View Article : Google Scholar : PubMed/NCBI
|
|
25
|
Livak KJ and Schmittgen TD: Analysis of
relative gene expression data using real-time quantitative PCR and
the 2(-Delta Delta C(T)) method. Methods. 25:402–408. 2001.
View Article : Google Scholar
|
|
26
|
Ponti D, Costa A, Zaffaroni N, Pratesi G,
Petrangolini G, Coradini D, Pilotti S, Pierotti MA and Daidone MG:
Isolation and in vitro propagation of tumorigenic breast cancer
cells with stem/progenitor cell properties. Cancer Res.
65:5506–5511. 2005. View Article : Google Scholar : PubMed/NCBI
|
|
27
|
Xu N, Wang F, Lv M and Cheng L: Microarray
expression profile analysis of long non-coding RNAs in human breast
cancer: A study of Chinese women. Biomed Pharmacother. 69:221–227.
2015. View Article : Google Scholar : PubMed/NCBI
|
|
28
|
Sun J, Lin Y and Wu J: Long non-coding RNA
expression profiling of mouse testis during postnatal development.
PLoS One. 8:e757502013. View Article : Google Scholar : PubMed/NCBI
|
|
29
|
Guenzl PM and Barlow DP: Macro lncRNAs: A
new layer of cis-regulatory information in the mammalian genome.
RNA Biol. 9:731–741. 2012. View Article : Google Scholar : PubMed/NCBI
|
|
30
|
Gong X, Wei W, Chen L, Xia Z and Yu C:
Comprehensive analysis of long non-coding RNA expression profiles
in hepatitis B virus-related hepatocellular carcinoma. Oncotarget.
7:42422–42430. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
31
|
Hernandez-Vargas H, Ouzounova M, Le
Calvez-Kelm F, Lambert MP, McKay-Chopin S, Tavtigian SV, Puisieux
A, Matar C and Herceg Z: Methylome analysis reveals Jak-STAT
pathway deregulation in putative breast cancer stem cells.
Epigenetics. 6:428–439. 2011. View Article : Google Scholar : PubMed/NCBI
|
|
32
|
Almozyan S, Colak D, Mansour F, Alaiya A,
Al-Harazi O, Qattan A, Al-Mohanna F, Al-Alwan M and Ghebeh H: PD-L1
promotes OCT4 and Nanog expression in breast cancer stem cells by
sustaining PI3K/AKT pathway activation. Int J Cancer.
141:1402–1412. 2017. View Article : Google Scholar : PubMed/NCBI
|
|
33
|
Chanmee T, Ontong P, Izumikawa T,
Higashide M, Mochizuki N, Chokchaitaweesuk C, Khansai M, Nakajima
K, Kakizaki I, Kongtawelert P, et al: Hyaluronan production
regulates metabolic and cancer stem-like properties of breast
cancer cells via hexosamine biosynthetic pathway-coupled HIF-1
signaling. J Biol Chem. 291:24105–24120. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
34
|
Sahu D, Hsu CL, Lin CC, Yang TW, Hsu WM,
Ho SY, Juan HF and Huang HC: Co-expression analysis identifies long
noncoding RNA SNHG1 as a novel predictor for event-free survival in
neuroblastoma. Oncotarget. 7:58022–58037. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
35
|
Hu C, Xu L, Liang S, Zhang Z, Zhang Y and
Zhang F: Lentivirus-mediated shRNA targeting Nanog inhibits cell
proliferation and attenuates cancer stem cell activities in breast
cancer. J Drug Target. 24:422–432. 2016. View Article : Google Scholar
|
|
36
|
Berteaux N, Lottin S, Monté D, Pinte S,
Quatannens B, Coll J, Hondermarck H, Curgy JJ, Dugimont T and
Adriaenssens E: H19 mRNA-like noncoding RNA promotes breast cancer
cell proliferation through positive control by E2F1. J Biol Chem.
280:29625–29636. 2005. View Article : Google Scholar : PubMed/NCBI
|
|
37
|
Hou P, Zhao Y, Li Z, Yao R, Ma M, Gao Y,
Zhao L, Zhang Y, Huang B and Lu J: LincRNA-ROR induces
epithelial-to-mesenchymal transition and contributes to breast
cancer tumorigenesis and metastasis. Cell Death Dis. 5:e12872014.
View Article : Google Scholar : PubMed/NCBI
|
|
38
|
Ricardo S, Vieira AF, Gerhard R, Leitão D,
Pinto R, Cameselle-Teijeiro JF, Milanezi F, Schmitt F and Paredes
J: Breast cancer stem cell markers CD44, CD24 and ALDH1: Expression
distribution within intrinsic molecular subtype. J Clin Pathol.
64:937–946. 2011. View Article : Google Scholar : PubMed/NCBI
|
|
39
|
Honeth G, Bendahl PO, Ringnér M, Saal LH,
Gruvberger-Saal SK, Lövgren K, Grabau D, Fernö M, Borg A and
Hegardt C: The CD44+/CD24- phenotype is enriched in basal-like
breast tumors. Breast Cancer Res. 10:R532008. View Article : Google Scholar : PubMed/NCBI
|
|
40
|
Xu L, Zhang L, Hu C, Liang S, Fei X, Yan
N, Zhang Y and Zhang F: WNT pathway inhibitor pyrvinium pamoate
inhibits the self-renewal and metastasis of breast cancer stem
cells. Int J Oncol. 48:1175–1186. 2016. View Article : Google Scholar : PubMed/NCBI
|
|
41
|
Sheik Mohamed J, Gaughwin PM, Lim B,
Robson P and Lipovich L: Conserved long noncoding RNAs
transcriptionally regulated by Oct4 and Nanog modulate pluripotency
in mouse embryonic stem cells. RNA. 16:324–337. 2010. View Article : Google Scholar :
|
|
42
|
Huang Y, Zheng Y, Jin C, Li X, Jia L and
Li W: Long non-coding RNA H19 inhibits adipocyte differentiation of
bone marrow mesenchymal stem cells through epigenetic modulation of
histone deacetylases. Sci Rep. 6:288972016. View Article : Google Scholar : PubMed/NCBI
|
|
43
|
Hu Y, Guo R, Wei J, Zhou Y, Ji W, Liu J,
Zhi X and Zhang J: Effects of PI3K inhibitor NVP-BKM120 on
overcoming drug resistance and eliminating cancer stem cells in
human breast cancer cells. Cell Death Dis. 6:e20202015. View Article : Google Scholar : PubMed/NCBI
|
|
44
|
Mercer TR, Dinger ME and Mattick JS: Long
non-coding RNAs: Insights into functions. Nat Rev Genet.
10:155–159. 2009. View Article : Google Scholar : PubMed/NCBI
|
|
45
|
Morris KV, Santoso S, Turner AM, Pastori C
and Hawkins PG: Bidirectional transcription directs both
transcriptional gene activation and suppression in human cells.
PLoS Genet. 4:e10002582008. View Article : Google Scholar : PubMed/NCBI
|
|
46
|
Ashe HL, Monks J, Wijgerde M, Fraser P and
Proudfoot NJ: Intergenic transcription and transinduction of the
human beta-globin locus. Genes Dev. 11:2494–2509. 1997. View Article : Google Scholar : PubMed/NCBI
|
|
47
|
Guenther MG, Levine SS, Boyer LA, Jaenisch
R and Young RA: A chromatin landmark and transcription initiation
at most promoters in human cells. Cell. 130:77–88. 2007. View Article : Google Scholar : PubMed/NCBI
|
|
48
|
Xiang JF, Yin QF, Chen T, Zhang Y, Zhang
XO, Wu Z, Zhang S, Wang HB, Ge J, Lu X, et al: Human colorectal
cancer-specific CCAT1-L lncRNA regulates long-range chromatin
interactions at the MYC locus. Cell Res. 24:513–531. 2014.
View Article : Google Scholar : PubMed/NCBI
|
|
49
|
He Y, Vogelstein B, Velculescu VE,
Papadopoulos N and Kinzler KW: The antisense transcriptomes of
human cells. Science. 322:1855–1857. 2008. View Article : Google Scholar : PubMed/NCBI
|
|
50
|
Al-Hajj M, Wicha MS, Benito-Hernandez A,
Morrison SJ and Clarke MF: Prospective identification of
tumorigenic breast cancer cells. Proc Natl Acad Sci USA.
100:3983–3988. 2003. View Article : Google Scholar : PubMed/NCBI
|
|
51
|
Wang KC and Chang HY: Molecular mechanisms
of long noncoding RNAs. Mol Cell. 43:904–914. 2011. View Article : Google Scholar : PubMed/NCBI
|
