|
1
|
Yamada N, Araki H and Yoshimura H:
Identification of antidepressant-like ingredients in ginseng root
(Panax ginseng CA Meyer) using a menopausal depressive-like state
in female mice: Participation of 5-HT2A receptors. Psychopharmacol
(Berl). 216:589–599. 2011. View Article : Google Scholar
|
|
2
|
Chen F, Chen Y, Kang X, Zhou Z, Zhang Z
and Liu D: Anti-apoptotic function and mechanism of ginseng
saponins in Rattus pancreatic β-cells. Biol Pharm Bull.
35:1568–1573. 2012. View Article : Google Scholar : PubMed/NCBI
|
|
3
|
Park JD, Rhee DK and Lee YH: Biological
activities and chemistry of saponins from Panax ginseng CA Meyer.
Phytochemistry Rev. 4:159–175. 2005. View Article : Google Scholar
|
|
4
|
Chang YS, Seo EK and Gyllenhaal C: Panax
ginseng: A role in cancer therapy? Integr Cancer Ther. 2:13–33.
2003. View Article : Google Scholar : PubMed/NCBI
|
|
5
|
Xiang YZ, Shang HC, Gao XM and Zhang BL: A
comparison of the ancient use of ginseng in traditional Chinese
medicine with modern pharmacological experiments and clinical
trials. Phytother Res. 22:851–858. 2008. View Article : Google Scholar : PubMed/NCBI
|
|
6
|
Li S, Li J, Yang XL, Cheng Z and Zhang WJ:
Genetic diversity and differentiation of cultivated ginseng (Panax
ginseng CA Meyer) populations in North-east China revealed by
inter-simple sequence repeat (ISSR) markers. Gen Resour Crop
Evolution. 58:815–824. 2011. View Article : Google Scholar
|
|
7
|
Wu D, Austin RS and Zhou S: The root
transcriptome for North American ginseng assembled and profiled
across seasonal development. BMC Genomics. 14:5642013. View Article : Google Scholar : PubMed/NCBI
|
|
8
|
Xing YZ and Ma FR: The research of trends
of each growing periods in ginseng. J Northeast Normal Univ.
1:57–62. 1981.
|
|
9
|
Dale JE: The control of leaf expansion.
Ann Rev Plant Physiol Plant Mol Biol. 39:267–295. 1988. View Article : Google Scholar
|
|
10
|
Punja ZK, Wan A and Rahman M: Growth,
population dynamics and diversity of Fusarium equiseti in ginseng
fields. Eur J Plant Pathol. 121:173–184. 2008. View Article : Google Scholar
|
|
11
|
Jeger MJ: Analysis of disease progress as
a basis for evaluating disease management practices. Annu Rev
Phytopathol. 42:61–82. 2004. View Article : Google Scholar : PubMed/NCBI
|
|
12
|
Choi HI, Waminal NE, Park HM, Kim NH, Choi
BS, Park M, Choi D, Lim YP, Kwon SJ, Park BS, et al: Major repeat
components covering one-third of the ginseng (Panax ginseng C.A.
Meyer) genome and evidence for allotetraploidy. Plant J.
77:906–916. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
13
|
Jung CH, Seog HM, Choi IW, Choi HD and
Choi HY: Effects of wild ginseng (Panax ginseng C.A. Meyer) leaves
on lipid peroxidation levels and antioxidant enzyme activities in
streptozotocin diabetic rats. J Ethnopharmacol. 98:245–250. 2005.
View Article : Google Scholar : PubMed/NCBI
|
|
14
|
Van Dijk EL, Auger H, Jaszczyszyn Y and
Thermes C: Ten years of next-generation sequencing technology.
Trends Genet. 30:418–426. 2014. View Article : Google Scholar : PubMed/NCBI
|
|
15
|
Gupta P, Goel R, Pathak S, Srivastava A,
Singh SP, Sangwan RS, Asif MH and Trivedi PK: De novo assembly,
functional annotation and comparative analysis of Withania
somnifera leaf and root transcriptomes to identify putative genes
involved in the with anolides biosynthesis. PLoS One. 8:e627142013.
View Article : Google Scholar : PubMed/NCBI
|
|
16
|
Chan AI, McGregor LM and Liu DR: Novel
selection methods for DNA-encoded chemical libraries. Curr Opin
Chem Biol. 26:55–61. 2015. View Article : Google Scholar : PubMed/NCBI
|
|
17
|
Zhang N, Zhang L, Tao Y, Guo L, Sun J, Li
X, Zhao N, Peng J, Li X, Zeng L, et al: Construction of a high
density SNP linkage map of kelp (Saccharina japonica) by sequencing
Taq I site associated DNA and mapping of a sex determining locus.
BMC Genomics. 16:1892015. View Article : Google Scholar : PubMed/NCBI
|
|
18
|
Schroeder A, Mueller O, Stocker S,
Salowsky R, Leiber M, Gassmann M, Lightfoot S, Menzel W, Granzow M
and Ragg T: The RIN: An RNA integrity number for assigning
integrity values to RNA measurements. BMC Mol Biol. 7:32006.
View Article : Google Scholar : PubMed/NCBI
|
|
19
|
Wang X, Li S, Li J, Li C and Zhang Y: De
novo transcriptome sequencing in Pueraria lobata to identify
putative genes involved in isoflavones biosynthesis. Plant Cell
Rep. 34:733–743. 2015. View Article : Google Scholar : PubMed/NCBI
|
|
20
|
Tsanakas GF, Manioudaki ME, Economou AS
and Kalaitzis P: De novo transcriptome analysis of petal senescence
in Gardenia jasminoides Ellis. BMC Genomics. 4:5542014. View Article : Google Scholar
|
|
21
|
Camacho C, Coulouris G, Avagyan V, Ma N,
Papadopoulos J, Bealer K and Madden TL: BLAST+: Architecture and
applications. BMC Bioinformatics. 10:4212009. View Article : Google Scholar : PubMed/NCBI
|
|
22
|
Gene Ontology Consortium: The gene
ontology (GO) project in 2006. Nucleic Acids Res. 34(Database
issue): D322–D326. 2006.PubMed/NCBI
|
|
23
|
Conesa A, Götz S, García-Gómez JM, Terol
J, Talón M and Robles M: Blast2GO: A universal tool for annotation,
visualization and analysis in functional genomics research.
Bioinformatics. 21:3674–3676. 2005. View Article : Google Scholar : PubMed/NCBI
|
|
24
|
Tatusov RL, Fedorova ND, Jackson JD,
Jacobs AR, Kiryutin B, Koonin EV, Krylov DM, Mazumder R, Mekhedov
SL, Nikolskaya AN, et al: The COG database: An updated version
includes eukaryotes. BMC Bioinformatics. 4:412003. View Article : Google Scholar : PubMed/NCBI
|
|
25
|
Kanehisa M, Goto S, Hattori M,
Aoki-Kinoshita KF, Itoh M, Kawashima S, Katayama T, Araki M and
Hirakawa M: From genomics to chemical genomics: New developments in
KEGG. Nucleic Acids Res. 34(Database issue): D354–D357. 2006.
View Article : Google Scholar : PubMed/NCBI
|
|
26
|
Mortazavi A, Williams BA, McCue K,
Schaeffer L and Wold B: Mapping and quantifying mammalian
transcriptomes by RNA-Seq. Nat Methods. 5:621–628. 2008. View Article : Google Scholar : PubMed/NCBI
|
|
27
|
Bustin SA, Beaulieu JF, Huggett J, Jaggi
R, Kibenge FS, Olsvik PA, Penning LC and Toegel S: MIQE précis:
Practical implementation of minimum standard guidelines for
fluorescence-based quantitative real-time PCR experiments. BMC Mol
Biol. 11:742010. View Article : Google Scholar : PubMed/NCBI
|
|
28
|
Raso A, Mascelli S, Nozza P, Ugolotti E,
Vanni I, Capra V and Biassoni R: Troubleshooting fine-tuning
procedures for qPCR system design. J Clin Lab Anal. 25:389–394.
2011. View Article : Google Scholar : PubMed/NCBI
|
|
29
|
Livak KJ and Schmittgen TD: Analysis of
relative gene expression data using real-time quantitative PCR and
the 2(-Delta Delta C(T)) Method. Methods. 25:402–408. 2001.
View Article : Google Scholar : PubMed/NCBI
|
|
30
|
Ye J, Fang L, Zheng H, Zhang Y, Chen J,
Zhang Z and Wang J, Li S, Li R, Bolund L and Wang J: WEGO: A web
tool for plotting GO annotations. Nucleic Acids Res. 34(Web Server
Issue): W293–W297. 2006. View Article : Google Scholar : PubMed/NCBI
|
|
31
|
Takáč T, Pechan T and Šamaj J:
Differential proteomics of plant development. J Proteomics.
74:577–588. 2011. View Article : Google Scholar : PubMed/NCBI
|
|
32
|
Khan Z, Kim SG, Jeon YH, Khan HU, Son SH
and Kim YH: A plant growth promoting rhizobacterium, Paenibacillus
polymyxa strain GBR-1, suppresses root-knot nematode. Bioresource
Technol. 99:3016–3023. 2008. View Article : Google Scholar
|
|
33
|
Nagao R, Yokono M, Teshigahara A, Akimoto
S and Tomo T: Light-harvesting ability of the fucoxanthin
chlorophyll a/c-binding protein associated with photosystem II from
the Diatom Chaetoceros gracilis as revealed by picosecond
time-resolved fluorescence spectroscopy. J PhysChem B.
118:5093–5100. 2014.
|
|
34
|
Ha YI, Lim JM, Ko SM, Liu JR and Choi DW:
A ginseng-specific abundant protein (GSAP) located on the cell wall
is involved in abiotic stress tolerance. Gene. 386:115–122. 2007.
View Article : Google Scholar : PubMed/NCBI
|
|
35
|
Jiang T, Zhou B, Luo M, Abbas HK, Kemerait
R, Lee RD, Scully BT and Guo B: Expression analysis of
stress-related genes in kernels of different maize (Zea mays L.)
inbred lines with different resistance to aflatoxin contamination.
Toxins (Basel). 3:538–550. 2011. View Article : Google Scholar : PubMed/NCBI
|
|
36
|
Karthikeyan M, Jayakumar V, Radhika K,
Bhaskaran R, Velazhahan R and Alice D: Induction of resistance in
host against the infection of leaf blight pathogen (Alternaria
palandui) in onion (Allium cepa var. aggregatum). Indian J Biochem
Biophys. 42:3712005.PubMed/NCBI
|
|
37
|
Salleh FM, Evans K, Goodall B, Machin H,
Mowla SB, Mur LA, Runions J, Theodoulou FL, Foyer CH and Rogers HJ:
A novel function for a redox-related LEA protein (SAG21/AtLEA5) in
root development and biotic stress responses. Plant Cell Environ.
35:418–429. 2012. View Article : Google Scholar : PubMed/NCBI
|
|
38
|
Zhang C, Shi H, Chen L, Wang X, Lü B,
Zhang S, Liang Y, Liu R, Qian J, Sun W, et al: Harpin-induced
expression and transgenic overexpression of the phloem protein gene
AtPP2-A1 in Arabidopsis repress phloem feeding of the green peach
aphid Myzuspersicae. BMC Plant Biol. 11:112011. View Article : Google Scholar : PubMed/NCBI
|
|
39
|
Barber J: Photosynthetic energy
conversion: Natural and artificial. Chem Soc Rev. 38:185–196. 2009.
View Article : Google Scholar : PubMed/NCBI
|
|
40
|
Van Loon LC and Van Strien EA: The
families of pathogenesis-related proteins, their activities and
comparative analysis of PR-1 type proteins. Physiol Mol Plant
Pathol. 55:85–97. 1999. View Article : Google Scholar
|
|
41
|
Varet A, Parker J, Tornero P, Nass N,
Nürnberger T, Dangl JL, Scheel D and Lee J: NHL25 and NHL3, two
NDR1/HIN1-like genes in Arabidopsis thaliana with potential role(s)
in plant defense. Mol Plant Microbe Interact. 15:608–616. 2002.
View Article : Google Scholar : PubMed/NCBI
|
|
42
|
Durrant WE, Rowland O, Piedras P,
Hammond-Kosack KE and Jones JD: cDNA-AFLP reveals a striking
overlap in race-specific resistance and wound response gene
expression profiles. Plant Cell. 12:963–977. 2000. View Article : Google Scholar : PubMed/NCBI
|
|
43
|
Cole AM, Ganz T, Liese AM, Burdick MD, Liu
L and Strieter RM: Cutting edge: IFN-inducible ELR−CXC chemokines
display defensin-like antimicrobial activity. J Immunol.
167:623–627. 2001. View Article : Google Scholar : PubMed/NCBI
|
|
44
|
Kelman A and Sequeira L: Resistance in
plants to bacteria. R Soc Lond Proc. 181:247–266. 1972; View Article : Google Scholar
|
|
45
|
Chen S, Luo H, Li Y, Sun Y, Wu Q, Niu Y,
Song J, Lv A, Zhu Y, Sun C, et al: 454 EST analysis detects genes
putatively involved in ginsenoside biosynthesis in Panax ginseng.
Plant Cell Rep. 30:1593–1601. 2011. View Article : Google Scholar : PubMed/NCBI
|
