Mutation of the TERT promoter leads to poor prognosis of patients with non‑small cell lung cancer

Introduction

The telomere is a region of repetitive nucleotide sequences at each end of a chromosome. The telomere protects the ends of chromosomes from deterioration or from fusion with adjacent chromosomes. Therefore, telomeres are necessary for maintaining genomic integrity and stability (1). Furthermore, telomerase reverse transcriptase (TERT) is a ribonucleoprotein polymerase that maintains telomere ends (2). Activation mutations in the TERT promoter lead to increased expression of telomerase, which sustains telomere length (TL) and genomic stability, thereby allowing cancer cells to continuously divide, and preventing senescence or apoptosis (2). TERT promoter mutations were primarily established in melanoma; however, were subsequently discovered in a number of other common types of cancer, including hepatocellular cancer, bladder cancer, glioblastoma, and thyroid cancer (3–7). In addition, a previous study reported that TERT promoter mutations with ultraviolet signatures are frequent in skin cancer, suggesting that the overexpression of telomerase serves an important role in the pathogenesis of these tumors (2).

Lung cancer is a primary public health problem and a principal cause of cancer-associated mortality worldwide (8). There are two primary types of lung cancer: Small cell lung cancer (SCLC) and non-small cell lung cancer (NSCLC). Between 10 and 15% of lung cancer cases are SCLC, named for the size of the cancer cells when observed under a microscope (9). By contrast, between 85 and 90% of lung cancer cases are NSCLC (9). As NSCLC typically grows and spreads more slowly compared with SCLC, it does not frequently respond to chemotherapy, in contrast to SCLC (10). Therefore, there are numerous efforts to develop NSCLC targeted chemotherapy based on oncogenic mutations, including those in epidermal growth factor receptor (EGFR) (10).

However, whether patients with lung cancer exhibit TERT promoter mutations and their prevalence remains unclear due to the low frequency of TERT promoter mutations in lung cancer. In the present study, the presence of TERT promoter mutations in NSCLC was investigated, and the potential association between clinicopathological features and TERT promoter mutations evaluated. To elucidate the role of TERT mutations, TL was also investigated based on previous reports of its prognostic value (11,12).

Patients and methods

Patients and tissue samples

Tumor specimens and corresponding non-malignant lung tissue specimens (n=188) were provided by the National Biobank of Korea, Kyungpook National University Hospital (KNUH; Daegu, South Korea), supported by the Ministry of Health, Welfare, and Family Affairs (Sejong, South Korea). A total of 89 patients were <60 years old and 99 patients were ≥60 years old. All materials derived from the National Biobank of Korea, KNUH, were obtained under institutional review board-approved protocols (approval no. KNUMCBIO_14-1010). None of the patients received chemotherapy or radiotherapy prior to surgery.

TERT promoter mutation

Genomic DNA (gDNA) was isolated from tumor samples using QIAamp DNA mini kits (Qiagen, Inc., Valencia, CA, USA). The TERT promoter region was amplified from isolated gDNA using the polymerase chain reaction (PCR) as described previously (13). PCR was performed using AmpliTaq Gold DNA polymerase (Applied Biosystems; thermo Fisher Scientific, Inc., Waltham, MA, USA). The sequences of the forward and reverse primers were 5′-CACCCGTCCTGCCCCTTCACCTT-3′ and 5′-GGCTTCCCACGTGCGCAGCAGGA-3′, respectively. Thermocycling conditions were 40 cycles of at 94°C for 30 sec, 55°C for 30 sec and 72°C for 60 sec. The PCR products were separated on a 1.5% agarose gel using electrophoresis and stained with ethidium bromide for 20 mins to confirm the size of the bands. Direct DNA sequencing of the TERT promoter region was subsequently performed using an ABI 3730 DNA sequencer (Bionics Inc., Seoul, South Korea).

Relative telomere length determination

Telomere length was analyzed using quantitative PCR (qPCR) as aforementioned. For the quantitative determination of telomere length relative to nuclear DNA (nDNA), specific primers for telomere (T) and nDNA-encoded β-globin (S) were selected, according to a previous study (13). The primer sequences were: telomere forward, 5′-GGTTTTTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGT-3′ and reverse, 5′-TCCCGACTATCCCTATCCCTATCCCTATCCCTATCC-CTA-3′; β-globin forward, 5′-CAGCAAGTGGGAAGGTGTAATCC-3′ and reverse, 5′-CCCATTCTATCATCAACGGGTACAA-3′. qPCR was carried out using a LightCycler 480 II system (Roche Diagnostics, Basel, Switzerland) with SYBR PCR master mix (Toyobo, Osaka, Japan). Relative telomere length was determined by calculating T/S values using the following formula: T/S=2−ΔCq, where ΔCq=mean CqT-mean CqS (14). Each measurement was repeated in triplicate and five serially diluted control samples were included in each experiment.

Statistical analysis

χ2, Fisher's exact test, the Mann-Whitney U test and Spearman's rank correlation analysis were used to analyze the association between variables using SPSS version 20.0 (IBM SPSS, Armonk, NY, USA). Survival curves, constructed using the univariate Kaplan-Meier estimators, were compared using the log-rank test. Overall survival (OS) was defined as the time between diagnosis and mortality. Disease-free survival (DFS) was defined as the time between diagnosis, and disease recurrence or the development of distant metastasis. Hazard ratios (HRs) and 95% confidence intervals (CIs) were estimated using a multivariate Cox proportional hazards model, with adjustment for age, gender, EGFR mutation and histological grade. P<0.05 was considered to indicate a statistically significant difference.

Results

Frequency and clinicopathological characteristics, of TERT promoter mutation and TL in patients with NSCLC

The TERT promoter regions of 188 patients with NSCLC were sequenced and mutations were observed in 2.2% (4/188) of patients. Previous studies reported that C250T (−146C>T) and C228T (−124C>T) were points of frequent TERT promoter mutation in the majority of cancer types, and that lung cancer exhibited only the C228T mutation. In the present study, all cases with a TERT promoter mutation exhibited the C228T mutation and one case also exhibited a novel C247 (−143G>T) mutation (Fig. 1A). The clinicopathological characteristics of patients with NSCLC and TERT promoter mutations are presented in Table I. TERT promoter mutation was statistically associated with lymph node invasion (P<0.001). TERT promoter mutation was observed more in patients with poor differentiation compared with patients with well-differentiated NSCLC (0.7% vs. 7.7%); however, the difference was not statistically significant (P=0.060; Table I).

Figure 1. TERT promoter mutation status and telomere length in patients with non-small cell lung cancer. (A) Identification of C228T and G247T TERT promoter region mutations. (B) Negative association between telomere length and smoking status. (C) Association between telomere length and age. TERT, telomerase reverse transcriptase; R, Spearman's rank correlation coefficient.

Table I. Association between clinicopathological characteristics and TERT promoter mutation status in patients with non-small cell lung cancer.

Table I.

Association between clinicopathological characteristics and TERT promoter mutation status in patients with non-small cell lung cancer.

		TERT promoter status
Clinicopathological characteristic	n	Wild-type (%)	Mutated (%)	P-value
Total	188	184 (97.8)	4 (2.2)
Age, years				1.00
<60	89	87 (97.8)	2 (2.2)
≥60	99	97 (98.0)	2 (2.0)
Gender				0.575
Male	136	132 (97.1)	4 (2.9)
Female	50	50 (100)	0 (0)
pT				1.00
1/2	157	153 (97.5)	4 (2.5)
3/4	27	27 (100)	0 (0)
pN				<0.001
0	155	153 (98.7)	2 (1.3)
1	20	20 (100)	0 (0)
2	9	7 (77.8)	2 (22.2)
Histological type				0.637
Squamous cell carcinoma	97	94 (96.9)	3 (3.1)
Adenocarcinoma	90	89 (98.9)	1 (1.1)
Differentiation status				0.060
Well/moderate	146	145 (99.3)	1 (0.7)
Poor/undifferentiated	26	24 (92.3)	2 (7.7)
Smoking				0.574
Yes/ever	138	134 (97.1)	4 (2.9)
Never	49	49 (100)	0 (0)
EGFR mutation status				1.00
Mutated	37	37 (100)	0 (0)
Wild-type	110	109 (99.1)	1 (0.9)

[i] Due to insufficient clinical data, not all patient characteristics have been presented. TERT, telomerase reverse transcriptase; pT, primary tumor grade; pN, regional lymph node grade; EGFR, epidermal growth factor receptor.

TL was analyzed in only 99/188 patients with NSCLC due to a lack of DNA samples. The mean (± standard deviation) TL in NSCLC was 3.04±0.30, calculated as the ratio of TL in tumors to that of paired wild-type tissues. The mean TL of patients with NSCLC with and without TERT promoter mutations, was 1.82±0.49 and 3.09±1.05, respectively, exhibiting no statistically significant difference (P=0.282). To further investigate the association between TL and the clinicopathological features of patients with NSCLC, patients were categorized into two subgroups according to the mean value of the tumor/wild-type ratios (3.04). The clinicopathological characteristics of patients stratified to TL are summarized in Table II. TL was observed to be markedly decreased in males (72.2%) compared with females (50.0%) (P=0.058). However, TL exhibited a significant association with smokers compared with non-smokers (73.8 vs. 42.1%; P=0.008; Table II). To confirm the association between TL and smoking status, quantitative analysis was performed using Spearman's rank correlation coefficient (R) (Fig. 1B and C). The total pack-year of smoking was negatively associated with TL (R=−0.210; P=0.037). However, age did not demonstrate any significant association with TL (R=0.015; P=0.883). Other variables exhibited no significant association with TERT promoter mutation or TL.

Table II. Association between clinicopathological characteristics and telomere length in patients with non-small cell lung cancer.

Table II.

Association between clinicopathological characteristics and telomere length in patients with non-small cell lung cancer.

		Telomere length
Clinicopathological characteristic	n	Short (%)	Long (%)	P-value
Total	99	67 (67.7)	32 (32.3)	1.00
Age, years				0.71
<60	53	35 (66.0)	18 (34.0)
≥60	46	32 (69.6)	14 (30.4)
Gender				0.058
Male	79	57 (72.2)	22 (27.8)
Female	20	10 (50.0)	10 (50.0)
pT				0.83
1/2	78	53 (67.9)	25 (32.1)
3/4	17	12 (70.6)	5 (29.4)
pN				0.78
0	68	45 (66.2)	23 (33.8)
1	19	13 (68.4)	6 (31.6)
2	9	7 (77.8)	2 (22.2)
Histological type				0.100
Squamous cell carcinoma	61	45 (73.8)	16 (26.2)
Adenocarcinoma	38	22 (57.9)	16 (42.1)
Differentiation				0.85
Well/moderate	67	45 (67.2)	22 (32.8)
Poor/undifferentiated	17	11 (64.7)	6 (35.3)
Smoking				0.008
Yes/ever	80	59 (73.8)	21 (26.3)
Never	19	8 (42.1)	11 (57.9)
EGFR mutation status				1.0
Mutated	6	4 (66.7)	2 (33.3)
Wild-type	53	38 (71.7)	15 (28.3)

[i] pT, primary tumor grade; pN, regional lymph node grade; EGFR, epidermal growth factor receptor.

Prognostic value of TERT promoter mutation and TL in NSCLC

We then assessed survival analysis to clarify any prognostic significance of TERT mutations and TL in NSCLC. The median follow-up of patients for survival analysis was 78.8 months (range, 1–123 months). Univariate survival analysis was performed using Kaplan-Meier estimators and demonstrated a decreased OS in patients with NSCLC with TERT promoter mutations compared with wild-type TERT (17.74 vs. 79.90 months; χ2=13.25; P<0.001; Fig. 2A). However, TERT promoter mutation was not significantly associated with DFS (Fig. 2B). Survival analysis was also performed using TL and exhibited no significant prognostic value (OS, P=0.64; DFS, P=0.68; data not shown). To evaluate whether TERT promoter mutation is an independent prognostic marker in patients with NSCLC, the data was further analyzed using the Cox proportional hazards model, following adjustment for possible confounders of survival (Table III). Following multivariate analysis, TERT promoter mutation (OS, HR=13.16; 95% CI; 1.06–163.59; P=0.045; and DFS, HR=9.99; 95% CI, 0.87–114.18; P=0.064) exhibited potential value as an independent prognostic factor of OS. Histological type and EGFR mutation status also exhibited prognostic value, whereas TL did not demonstrate any statistical significance as an independent prognostic marker (OS, HR=2.08; 95% CI, 0.79–5.92; P=0.170; DFS, HR=1.17; 95% CI, 0.41–3.40; P=0.768).

Figure 2. Survival analyses of 188 patients with non-small cell lung cancer. (A) Overall survival and (B) disease-free survival stratified by TERT promoter mutation status. TERT, telomerase reverse transcriptase.

Table III. Multivariate analyses of the prognostic values of various factors.

Table III.

Multivariate analyses of the prognostic values of various factors.

	Overall survival		Disease-free survival
Factor	HR (95% CI)	P-value	HR (95% CI)	P-value
Age (>60 vs. ≤60 years old)	1.39 (0.58–3.33)	0.455	1.64 (0.64–4.22)	0.304
Gender (female vs. male)	1.47 (0.43–5.05)	0.534	1.63 (0.42–6.38)	0.478
Differentiation	1.78 (1.10–2.88)	0.019	2.00 (1.18–3.39)	0.01
EGFR mutation status	3.59 (0.87–14.76)	0.077	6.70 (1.37–32.87)	0.019
TERT promoter mutation status	13.16 (1.06–163.59)	0.045	9.99 (0.87–114.18)	0.064
Telomere length (short vs. long)	2.08 (0.73–5.92)	0.170	1.17 (0.41–3.40)	0.768

[i] EGFR, epidermal growth factor receptor; TERT, telomerase reverse transcriptase; HR, hazard ratio; CI, confidence interval.

Discussion

NSCLC, as a heterogeneous disease, has various outcomes even in patients with identical clinicopathological features. Identification of oncogenic driver mutations in NSCLC has promoted clinical treatment options, including targeted drugs. For example, EGFR-targeted therapy using gefitinib increases survival results and prognosis of patients with NSCLC (15). To define molecular subtypes of NSCLC for personalized therapy, it is necessary to understand the driver genes and their molecular mechanisms, which currently remain unclear. Therefore, in the present study the clinicopathological characteristics and prognostic effects, of TERT promoter mutations and TL, were evaluated in patients with surgically resected NSCLC.

The results of the present study demonstrated that TERT promoter mutations were infrequent in patients with NSCLC; however, predicted poor OS following the construction of univariate and multivariate survival models. Previous studies reported that C250 (−146C>T) and C228 (−124C>T) were sites of frequent mutation, and that lung cancer exhibits only the C228T mutation (2/68 cell lines) (3). Recently, Li et al (16) identified no TERT promoter mutation in 174 NSCLC cases; however, Ma et al (17) reported it in 2.57% (12/467) of patients with NSCLC. Previous reports identified certain novel TERT promoter mutations, which were associated with old age. In the present study, TERT promoter mutations were detected in 2.2% (4/188) of patients with NSCLC, which was consistent with previous studies (17). All cases with TERT promoter mutations exhibited a C228T mutation and one case exhibited the novel mutation, G247T (−143G>T). Certain studies have reported novel mutations of the TERT promoter region; however, the G247T mutation has not been reported in any type of cancer. In addition, TERT promoter mutations were associated with poor differentiation and lymph node invasion, which may predict a poor prognosis.

Consistent with these characteristics, survival of patients with NSCLC with TERT mutations was significantly decreased compared with patients without TERT promoter mutations, following univariate and multivariate analyses. Horn et al (4) previously demonstrated that TERT promoter mutations may create an E-twenty-six binding motif, resulting in the upregulation of TERT expression at the mRNA level in melanoma. Although alterations in TERT mRNA levels were not evaluated in the specimens of patients and the prognostic value of telomere-associated pathways remain unclear, the results of the present study suggested that TERT promoter mutations are an independent prognostic marker. Recent independent studies suggest that NSCLC patients with the 1st quartile (shortest) TL exhibit a poor outcome (18,19). An age-dependent association between TERT promoter mutations and TL was also suggested in patients with thyroid cancer (5). As TL is hypothesized to be different depending on the presence or absence of TERT promoter mutations (3–5), TL was analyzed in the present study to elucidate the role of TERT promoter mutations and TL in NSCLC. The TL levels were not observed to be significantly associated with TERT promoter mutations. Conversely, TL exhibited an association with male gender and positive smoking status; however, these results may have originated from the high rate of smoking in Korean males (20). However, TL exhibited no statistically significant association with other clinicopathological characteristics or prognosis in Korean patients with NSCLC. Following stratification of variables, including TL, TERT promoter mutation status exhibited no prognostic significance (data not shown). Certain recent studies demonstrated no difference in TERT expression compared with the presence of TERT promoter mutations (21,22). These reports indicate that tumor cells without TERT promoter mutations may have other mechanisms for activating TERT expression and changing TL. TERT promoter mutations may play a minor but independent role in lung carcinogenesis, inducing poor progression. To establish the true prognostic value of TERT promoter mutation, further study is required in larger cases. As EGFR mutation status was identified in the present study to be of prognostic significance in patients with NSCLC, analysis of EGFR mutation status in all samples is also required to elucidate the effect of TERT promoter mutation on lung carcinogenesis.

In conclusion, although the present study is limited by its retrospective design and small number of sample cases, the results demonstrate that TERT promoter mutations are infrequent in patients with NSCLC; however, are significantly associated with an unfavorable prognosis. These results provide novel insights into the consequences of TERT promoter mutations in patients with NSCLC and suggest their value as a prognostic marker in surgically resected NSCLC. The results of the present study warrant future large-scale studies to elucidate the underlying molecular mechanisms and to determine potential clinical utility.

Acknowledgements

This study was supported by grants of the Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education (NRF-2014R1A6A3A04058057) and by the Korean Government (MSIP; No. 2014R1A5A2010008).

References