Protein phosphatase 1γ regulates the proliferation of human glioma via the NF-κB pathway
- Authors:
- Published online on: March 1, 2016 https://doi.org/10.3892/or.2016.4644
- Pages: 2916-2926
Abstract
Introduction
Human neural glioma, the most lethal brain tumor and the most frequent type of primary adult brain neoplasms, has dismal outcome for patient (1–3). Patients diagnosed with glioma have a very low 5-year survival, compared with patients affected by glioblastoma multiforme (GBM) (4,5). Despite significant advances in neurosurgery and chemo-radiotherapy, glioma remains highly resistant to conventional treatments and improvements in patient outcome have been modest (6). For this reason, it is vital and urgent to investigate thoroughly the molecular pathological mechanism, for some more specific biomarkers and potential remedy targets.
Protein phosphatase 1 (PP1) is a member of the well-known mammalian protein phosphatases, serine/threonine phosphatases, which catalyzes the majority of protein dephosphorylation events that regulate diverse cellular processes, such as neuronal signaling, muscle contraction, glycogen synthesis, and cell proliferation. Mammals have three PP1 catalytic genes, PP1α, γ and δ, which are encoded by separate genes. These isoforms are >89% identical in amino acid sequence, with minor differences primarily at their NH2 and COOH termini (7). The equivalent T residue is conserved in all three PP1 isoforms (T316 in PP1β and T311 in PP1γ), and PP1γ can be inactivated by Cdk-dependent T311 phosphorylation. PP1α and/or -β could compensate for the depletion of PP1γ in development, but not in the specific function of spermiogenesis. PP1γ has two isoforms, γ1 and γ2, generated by differential splicing of PP1γ. PP1 isoforms are expressed in all tissues and are widely distributed, except for PP1γ2, which is found only in the testes. Mice with depleted PP1γ are viable, but males show defective spermiogenesis and are infertile (8). Thus, in this study, we focused on PP1γ1.
The transcription factor, nuclear factor-kappa B (NF-κB), plays an important role in tumor cells. Constitutive activation of NF-κB is responsible for proliferation, because inhibition of NF-κB leads to abrogation of proliferation (9). In normal cells, most of NF-κB complexes are kept predominantly cytoplasmic, and stay in an inactive form, by binding to a family of inhibitor proteins, the IκBs. Generally, the inactive NF-κB-IκBα complex is activated by phosphorylation on two conserved serine residues within the N-terminal domain of the IκB proteins (10). PP1γ enhances TRAF6 E3 ubiquitin ligase activity (11) and the induction of NF-κB activation (12). Subsequently, TRAF6 catalyzes the ubiquitin of IKK/NEMO (NF-κB essential modulator) (11). IKK proteins coordinate the phosphorylation, ubiquitination, and degradation of inhibitory IκBα proteins, liberating NF-κB heterodimers to translocate into the nucleus. Activation of the IκB kinase (IKK) complex results in the phosphorylation and subsequent proteasomal degradation of IκBα (13). Activation of the NF-κB signaling cascade results in complete degradation of IκB, allowing translocation of NF-κB to the nucleus, where it induces transcription (14). Activated NF-κB binds to specific DNA sequences in target genes involved in tumor cell proliferation, invasion, metastasis, angiogenesis, chemoresistance, radioresistance, inflammation and immunoregulation (10).
According to previous studies, PP1γ might promote tumor progression in colorectal cancer (15). Here, we identified the paralleled positive correlation between the expression of PP1γ and Ki-67 in human glioma tissue and cell lines, and the depletion of PP1γ reduced cell proliferation distinctly. Besides, we demonstrated PP1γ might accelerate the glioma cell proliferation via NF-κB pathway by enhancing the transportation of p65 into the nucleus. Based on the results, it might be a promising target for human glioma diagnosis and therapy in future.
Materials and methods
Patients and tissue specimens
The human glioma tissues were collected from 100 glioma surgical specimens without any therapy, and the clinicopathological data were provided by the Department of Pathology, Affiliated Hospital of Nantong University. Normal brain specimens obtained from 10 patients who received epilepsy surgery were verified for the absence of any tumor. Specimens were immediately frozen in liquid nitrogen and stored at −80°C until use. Some parts of the specimens (including WHO grade II, III and IV) were fixed in 10% formalin and embedded in paraffin for immunohistochemical analysis. All the tissues were collected and applied in accordance with The Code of Ethics of the World Medical Association. Ethics approval was given by the medical ethics committee of the Affiliated Hospital of Nantong University.
Cell lines and cell culture
The human glioblastoma cell lines H4, SHG44, U87MG, U251, A172 and U373 were purchased from Shanghai Institute of Cell Biology. All cells were cultured in the DMEM high-glucose medium (Gibco BRL, Grand Island, NY, USA) with 10% heat-inactivated fetal bovine serum at 37°C with 5% CO2.
Antibodies
The antibodies applied to immunohistochemistry included: anti-PP1γ (diluted 1:400, Santa Cruz Biotechnology), anti-Ki-67 (diluted 1:400, Santa Cruz Biotechnology). The antibodies applied to western blot analysis included: anti-PP1γ (diluted 1:2,000, Santa Cruz Biotechnology), anti-p65 (diluted 1:2,000, Santa Cruz Biotechnology), anti-p-p65 (S536-p, diluted 1:2,000, Cell Signaling Technology), anti-IκBα (diluted 1:2,000, Santa Cruz Biotechnology), anti-proliferating cell nuclear antigen (PCNA, diluted 1:1,000, Santa Cruz Biotechnology), anti-cyclin D1 (diluted 1:1,000, Santa Cruz Biotechnology), anti-α-tubulin (diluted 1:1,000, Santa Cruz Biotechnology), anti-Lamin B (diluted 1:1,000, Santa Cruz Biotechnology), anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH, diluted 1:1,500, Santa Cruz Biotechnology).
Immunohistochemistry (IHC)
The glioma tissues sections were deparaffinized in xylene, rehydrated in graded ethanol solutions, and then we block the endogenous peroxidase activity in 0.3% hydrogen peroxide. Then the sections were heated at 105°C in 0.1 M citrate buffer, pH 6.0 for 10 min and incubated at room temperature for 1 h to retrieve the antigen. Afterwards, the section were incubated with 5% bovine serum in PBS (phosphate-buffered saline) (pH 7.2) for blocking nonspecific protein binding, followed by overnight incubation with appropriate antibodies at 4°C. Negative-control groups were treated with non-specific immunoglobulin IgG (Sigma Chemical Co., St. Louis, MO, USA) as the first antibody. Then the sections were incubated. According to the manufacturer's instructions, the slides were rinsed in PBS and incubated with hematoxylin, dehydrated and mounted successively in resin mount (16).
Immunohistochemical evaluation
All of the stained sections were evaluated in a blinded manner by two independent senior pathologists without any clinicopathological variables of the patients (17). Five high-power fields (Leica microscope Germany) were selected randomly and >300 cells in each field were counted to determine the labeling index (LI), which means the percentage of immunostained cells relative to the total number of cells (18). Intensity was evaluated in comparison with the control and scored as follows: 0, negative staining; 1, weak staining; 2, moderate staining; 3, strong staining. The percentage of tumor cells stained positive was scored as follows: 0, <1% positive tumor cells; 1, 1–10% positive tumor cells; 2, 10–50% positive tumor cells; 3, 50–75% positive tumor cells; 4, >75% positive tumor cells. Then we added the scores of intensity and percentage as 0 and 2–7. 0, negative; 2–3, weak stained; 4–5, moderate stained; 6–7, strong stained. For statistical analysis, 0–3 were counted as low expression, while 4–7 were counted as overexpression (19).
Cellular fractionation
Cells were washed twice with phosphate-buffered saline (PBS), and resuspended in buffer A (50 mM NaCl, 10 mM HEPES, pH 8.0, 500 mM sucrose, 1 mM EDTA, 0.2% Triton X-100, 1 mM NaF, 0.5 mM Na3VO4, 1 mM PMSF, and 2 µg/ml aprotinin, 0.5 mM 2-mercaptoethanol) for 15 min on ice. Cells were homogenized with 20 strokes using a Dounce homogenizer. After brief centrifugation, the supernantant was collected as a cytoplasmic fraction and the pelleted nuclei was further washed three times with isotonic sucrose buffer (250 mM sucrose, 6 mM MgCl2, 10 mM Tris-HCl, pH 7.4) containing 0.5% non-ionic detergent Triton X-100 to dissolve any cytoplasmic membrane contaminants (20). To extract nuclear proteins, the isolated nuclei were resuspended in buffer C (350 mM NaCl, 10 mM HEPES, pH 8.0, 25% glycerol, 0.1 mM EDTA, 1 mM PMSF, and 2 µg/ml aprotinin, 0.5 mM 2-mercaptoethanol) with gentle rocking for 30 min at 4°C. After centrifugation, the supernatant was collected as a nuclear fraction (21).
Western blot assay
Glioma tissue samples were homogenized in lysis buffer (1% Nonidet P-40, 50 mmol/l Tris, pH 7.5, 5 mmol/l EDTA, 1% SDS, 1% sodium deoxycholate, 1% Triton X-100, 1 mmol/l PMSF, 10 mg/ml aprotinin, and 1 mg/ml leupeptin). Cell samples were washed three times with PBS, suspended in 2X lysis buffer (50 mM Tris-HCl, 120 mM NaCl, 0.5% Nonidet P-40, 100 mM NaF, 200 M Na3VO4, protease inhibitor mixture). Then, samples were denatured at 100°C for 15 min and evaluated with Bio-Rad protein assay (Bio-Rad, Hercules, CA, USA) for the total protein concentration, and then stored at −20°C. The protein samples were separated via SDS-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to polyvinylidene difluoride filter (PVDF) membranes (Millipore, Bedford, MA, USA). The membranes were blocked in TBST (20 mM Tris, 150 mM NaCl, 0.05% Tween-20) with 5% evaporated milk for 2 h at room temperature and then incubated in appropriate antibodies at 4°C for 6–8 h. The membranes were washed with TBST for three times, 5 min/each time and incubated with horseradish peroxidase-linked IgG for 2 h at room temperature, and then detected by infrared imaging system (Odyssey, USA). The blot band intensity was quantified by ImageJ analysis file (Wayne Rasband, National Institutes of Health, USA) (22).
RNA interference of PP1γ
The PP1γ-shRNAs were synthesized by GeneChem. PP1γ-shRNAs target sequences: shRNA#1, 5′-AATGCCACGAGACCTGTAA-3′; shRNA#2, 5′-GAATT ATGCGACCAACTGA-3′; shRNA#3, 5′-GACCGATTATGC TTTCTTT-3′; shRNA#4, 5′-TGCTGTCATGGAGGTTTAT-3′. U251 cells were transfected with 100 nmol/l of shRNA#2 performed with Lipofectamine 2000 (Invitrogen, Carlsbad, CA, USA) and U87MG cells with shRNA#4. The cells were identified as negative-control groups treated with control shRNA, and the mock non-treated groups.
Flow cytometry analysis of cell cycle
Following the indicated pre-treatment, cells were fixed with 70% methanol in PBS at −20°C for 48 h, and then with 1 mg/ml RNase A for 20 min at 37°C. Afterwards, the cells were stained with 0.5 mg/ml of propidium iodide (PI). The DNA contents were analyzed by a Becton-Dickinson flow cytometer, BD FACScan (San Jose, CA, USA).
Cell Counting Kit-8 (CCK)-8
The cells transfected by shRNAs, with the untreated groups were seeded on a 96-well cell culture cluster (Corning Inc., Corning, NY, USA) at 2×104 cells/well in 100 µl medium and incubated overnight. Cell Counting Kit-8 (Dojindo, Kumamoto, Japan) reagents were added to a subset of wells with different treatments, after which absorbance was measured at a test wavelength of 450 nm on an automated plate reader with the 630 nm wavelength as a reference group.
Colony formation assay
The selected and stably-transfected cells were plated in 6-cm culture plates at 100 cells/well. After incubation for 12 days at 37°C, the cells were washed twice with PBS and stained with Giemsa solution. The number of colonies containing >50 cells was counted under a microscope.
NF-κB activity assay
Nuclear extracts from U251 and U87MG cell lines, treated with conditioned media were prepared using the nuclear extract kit (Active Motif). Total protein amounts were measured by BCA-assay (Pierce, Rockford, IL, USA), NF-κB activity was measured using the TransAM NF-κB p65 assay kit according to the manufacturer's instructions. Briefly, 5 µg of nuclear extract per sample was added to the 96-well plate, in which oligonucleotide containing the NF-κB consensus site (5′-GGGACTTTCC-3′) was immobilized. The active form of NF-κB bound to the oligonucleotide was detected using an antibody against NF-κB p65 subunit. An HRP-conjugated secondary antibody provided a sensitive colorimetric readout that was quantified by spectrophotometry.
Statistical analysis
Statistical analysis was performed by the SPSS17.0 statistical analysis software. The statistical correlations between PP1γ and Ki-67 expression and the clinicopathological features were analyzed using the χ2 test. Survival analysis was carried out using the Kaplan-Meier method, and curves were compared using the log-rank test. All of values were expressed as mean± SEM (standard error of the mean), and P<0.05 was considered statistically significant.
Results
The correlation of the expression of PP1γ, p-p65, p65 and Ki-67 in human glioma tissues with the WHO grades of human glioma
For investigating the possible role of PP1γ in the development of glioma, we detected and compared the expression of PP1γ, p-p65, p65 in normal brain tissues and three couples of glioma tissues in the rank of WHO grade II, III and IV by western blot analysis. According to statistical analysis, we observed significant rising tendency of PP1γ in normal brain tissues, low-grade and high-grade glioma tissues (Fig. 1A and B), as well as p-p65 and p65. Especially, the relative expression of p-p65 is decreased after being normalized to total p65. As an important reported proliferation marker, Ki-67 was examined in 100 specimens of human glioma tissues with PP1γ by immunohistochemical staining. It showed consistent correlation of the expression of Ki-67 and PP1γ (Fig. 1C and D), indicating that PP1γ was related to the proliferation of glioma cells. Then, we summarized the clinicopathological statistics and found the close relationship of PP1γ to WHO grades of glioma (P<0.01), and it was the same as Ki-67 used as cross reference (Table I). There was no obvious relevance to other clinicopathological factors. Based on this, we considered that PP1γ might have a great influence on the progression of glioma relatively, and its overexpression might lead to poor prognosis.
Table IThe correlation between PP1γ, and Ki-67 expression and clinicopathological parameters in 100 glioma specimens. |
The relationship between the expression of PP1γ in the specimens and the patient 5-year survival or the prognosis of human glioma
To verify the presumption, we carried out statistical analysis via SPSS. According to Kaplan-Meier survival curves, the patients with high expression of PP1γ had lower accumulative 5-year survival ratio (P<0.01). It was just the same as the impact of overexpression of Ki-67 (Fig. 1E and F). Subsequently, we employed the univariate survival analysis to compare the impact of other clinicopathological factors on the 5-year survive to that of PP1γ (P<0.05) and Ki-67 (P<0.01), and we concluded that the overexpression of the two molecules was closely related to the poor prognosis of the glioma patients (Table II).
Table IIContribution of various potential prognostic factors to survival by univariate analysis in 100 glioma specimens. |
The expression of PP1γ in glioma cell lines and the relationship to cell proliferation
To identify the function of PP1γ in pathological procession of glioma, we selected two glioma cell lines, U251 and U87MG, for the following experiments, because PP1γ was shown to be the highest expressed in these cells (Fig. 1G and H).
In view of the positive relationship between PP1γ and Ki-67, overexpression of PP1γ was likely to accelerate cell proliferation. To make it clear, we designed a serum-starvation and re-feeding models with U251 and U87MG cell lines. The flow cytometry analysis indicated that when the cells were controlled in the serum deprivation environment for 72 h, the proportion of the cells arrested in the G1 phase increased to 63.00 and 63.09%, respectively. After re-feeding, the proportion of the cells in the G1 phase reduced and that in S phase increased gradually (Fig. 2A, B, E and F). At the same time, we detected the levels of the expression of PP1γ, p-p65 and reported cell proliferation protein markers, such as PCNA, and cyclin D1. Based on the results provided above (Fig. 2C, D, G and H), we could make the tentative conclusion that PP1γ might be related to the proliferation of glioma cells, and that it accelerates the pathological process of glioma.
Downregulation of PP1γ inhibits the proliferation of U251 and U87MG cell lines in vitro
Since we had uncovered that PP1γ was upregulated in the starve-released cells, it was necessary to verify its characteristics in the silencing of PP1γ. We transfected U251 and U87MG cells with control-shRNA, PP1γ-shRNA#1, PP1γ-shRNA#2, PP1γ-shRNA#3 and PP1γ-shRNA#4, respectively. The efficiency of all the shRNAs was compared by western blot analysis (Fig. 3A and B). As shown, PP1γ-shRNA#2 achieved the best knock-down efficiency in U251 cell line, as PP1γ-shRNA#4 to U87MG. We performed flow cytometry analyses to show the proportion of the transfected cells in G1 and S phases (Fig. 3C and D, P<0.01). Obviously, on the one hand the cells of G1 phase increased from 48.01 to 59.51% in U251, 48.34 to 61.65% in U87MG, on the other hand the cells of S phase decreased from 35.44 to 23.37% in U251, 38.19 to 25.82% in U87MG, which indicated that down-expression of PP1γ delayed the cell cycle. Moreover, we detected the expression of p-p65, p65, IκBα, cyclin D1, and PCNA (Fig. 3E and F). According to previous studies, the activation of the NF-κB signaling cascade results in complete degradation of IκB, allowing translocation of NF-κB to the nucleus, where it induces transcription (23). It revealed the declined expression of PP1γ and p-p65 accompanied by the increased IκBα, which meant that PP1γ did play an important role in the cell cycle and cell proliferation via the NF-κB pathway. To complete the evidence for conclusion, we carried out CCK-8 assay to compare the proliferation of PP1γ-depletion cells to the control-shRNA-transfected groups (Fig. 4A and B, P<0.01). The relative absorbance was less than that of the negative-control group. In the colony formation assay, similar difference was observed (Fig. 4C–F, P<0.01). Besides, we extracted the nuclear of PP1γ-depletion cells for NF-κB activity assay. The activity of NF-κB was obviously declined comparing to negative groups (Fig. 5A and B, P<0.01).
Depletion of PP1γ reduces p65 transport into the nucleus
Via western blot analysis, we observed the clearly decreased p65 expression in nucleus of PP1γ-depletion cells, and its expression in cytoplasm was more than the control groups (Fig. 5C and D). It showed that knocking-down PP1γ actually declined p65 transport across the nuclear envelope. In other words, PP1γ indeed played a role in accelerating the NF-κB pathway, thus enhancing glioma cell proliferation.
Discussion
Human glioma is the most common type of central nervous system (CNS) malignancy (24). The current standard therapy includes maximal safe resection followed by radiotherapy in combination with temozolomide (25). It is still a typical deadly cancer among the neurological oncology. Malignant glioma cell proliferation and invasion are key stages in cancer progression that affect mortality of the patients (26). Therefore, it is urgent to investigate the underlying molecular pathological mechanism of human glioma. In this study, we presented that PP1γ could be involved in the molecule mechanisms for the proliferation of human glioma, at least partially, via the NF-κB pathway.
Mammals express three PP1 catalytic isoforms, PP1α, PP1γ, and PP1β/σ, which show distinct subcellular localization patterns (27). PP1 catalytic isoforms do not exist freely in cells but rather associate with regulatory subunits to form distinct multimeric holoenzymes. In general, PP1 regulatory subunits function as signaling modules by regulating the enzymatic activity or targeting of catalytic subunits to specific substrates (28). According to some research, PP1α and PP1β/σ facilitates pRB-dependent DNA repair in retinoblastoma (29). Besides, PP1α has been characterized as an inhibitor of TNFR-induced NF-κB signaling (30), suggesting that the PP1 isoforms may be involved in DNA repair in human glioma. However, there is no enough evidence to demonstrate that the two isoforms are involved in the field of cell proliferation.
Protein phosphatase 1γ (PP1γ) is one of the serine/threonine protein phosphatases in human body which take part in the reversible phosphorylation reaction of nearly 70% of all eukaryotic proteins (31). It has been demonstrated that PP1γ executes positive regulation in the TRAF6-dependent immune responses (11), in which, NF-κB (p65) is activated and translocated into nucleus. The activated NF-κB binds to specific DNA sequences in target genes involving tumor cell proliferation (10). Thus, we investigated whether PP1γ played a role in human glioma. According to the World Health Organization (WHO), human glioma is classified into four grades as follows: pilocytic astrocytoma, WHO grade I; diffuse 'low grades' glioma, WHO grade II; anaplastic gliomas, WHO grade III; glioblastoma (GBM), WHO grade IV (32). We found the decreased relative expression of p-p65 hinting that p-p65 was the substrate of PP1γ. On the basis of systemic analysis of the clinicopathological statistics from experienced doctors of pathology department in the Affiliated Hospital of Nantong University, we identified the great positive correlation between the overexpression of PP1γ and the WHO grades of human glioma, which indicated a poor prognosis with a low 5-year survival rate. Moreover, employing the serum-starve and re-feeding models, we observed the positive correlation of PP1γ, p-p65 and proliferation markers, cyclin D1, and PCNA, demonstrating its function in proliferation. However, the molecule mechanism of PP1γ was still unclear.
Based on previous studies, PP1γ specifically dephosphorylate a phosphor-site on TRAF6, its E2 enzyme complex, allowing for full E3 ubiquitin ligase activity. Such a dephosphorylation event may expose nearby residues for modification by ubiquitin and enhance the enzymatic activity of TRAF6 (11). Moreover, the ubiquitination of TRAF6 is required for the induction of NF-κB activation and osteoclastogenesis (12). On the basis of recent studies, we made the hypothesis that PP1γ interacts with TRAF6 via residues 315–354 of the coiled-coil domain and enhances its ubiquitin activity. Then IKKγ is activated leading to the degradation of IκBα, which promotes the phosphorylation of p65 and the translocation into the nucleus. TRAF6 might be the key upstream molecule of p65. In the PP1γ-depletion cell models, we observed remarkably reduced expression of PP1γ and p-p65 and increased expression of IκBα in the cell lysate comparing to the negative-control groups (P<0.01). It uncovered the possible inhibition to the NF-κB pathway, which needed to be identified.
The activation of NF-κB signaling cascade results in complete degradation of IκB, allowing translocation of NF-κB to the nucleus, where it induces transcription (33). Activated NF-κB binds to specific DNA sequences in target genes involving tumor cell proliferation, invasion, metastasis, angiogenesis, chemoresistance, radioresistance, inflammation and immune-regulation (10). It means the translocation of p65 is necessary for the activation of transcription. Via western blot analysis, the reduced expression of p65 was detected in cell nucleus comparing to the negative-control groups (P<0.01). In addition, the inhibition of cell proliferation was observed by flow cytometry analysis of cell cycle, Cell Counting Kit (CCK)-8 assay and colony formation assay. Directly, the NF-κB activity assay testified the inactivation of PP1γ-depletion cells in contract to negative groups (P<0.01). The evidence was powerful demonstrating that the upregulated PP1γ activated NF-κB (p65) and enhanced the translocation into nucleus, leading to cell proliferation in human glioma. Besides, the ubiquitin ligase activity of TRAF6 can be diminished by the absence of PP1γ phosphatase activity (11). Nevertheless, the molecule mechanism is unknown. It is possible that PP1γ may specifically dephosphorylate an unknown inhibitory phosphosite on TRAF6, its E2 enzyme complex, or one of its substrates, allowing for full E3 ubiquitin ligase activity. To demonstrate the hypothesis and explore other possible upstream molecules, more experiments will be carried out in the following research plans.
In conclusion, PP1γ was significantly upregulated in human glioma accompanied by the inhibition of p65 translocation into the nucleus. We identified strong positive correlation of the overexpression of PP1γ, p-p65, p65 and the WHO grades of human glioma. Moreover, we observed the rising expression trend of PP1γ, p-p65 and proliferation markers in serum-starved models. The reduced expression of PP1γ and p-p65 and the increased expression of IκBα were detected in cell lysate of PP1γ-depletion models comparing to negative-control groups. Besides, the decreased expression of p65 was detected in the cell nucleus of PP1γ-deleption models. These data are compatible with the hypothesis that increased levels of PP1γ promoted cell proliferation through NF-κB pathway in human glioma. Nevertheless, further research is necessary to elucidate the function of PP1γ in essential biological events and to clarify possible novel therapeutic strategies in human glioma.
Acknowledgments
This study was supported by National Natural Science Foundation of China (no. 81372687).
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