Open Access

High expression levels of DEF6 predicts a poor prognosis for patients with clear cell renal cell carcinoma

  • Authors:
    • Zhen‑Peng Zhu
    • Lan‑Ruo Lin
    • Tong‑De Lv
    • Chun‑Ru Xu
    • Tian‑Yu Cai
    • Jian Lin
  • View Affiliations

  • Published online on: August 18, 2020     https://doi.org/10.3892/or.2020.7736
  • Pages: 2056-2066
  • Copyright: © Zhu et al. This is an open access article distributed under the terms of Creative Commons Attribution License.

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Abstract

Clear cell renal cell carcinoma (ccRCC) is one of the most common types of malignant tumors and early detection contributes to a better prognosis. Finding new biomarkers for the diagnosis or treatment remains meaningful. DEF6 guanine nucleotide exchange factor (DEF6) is upregulated in ccRCC compared to normal controls, but the relationship between DEF6 expression and prognosis in ccRCC is unclear. Moreover, the potential biological functions of DEF6 in ccRCC remains unclear. In the present study, the Cancer Genome Atlas (TCGA), Gene Expression Omnibus (GEO), TISIDB and the clinical database of the Peking University First Hospital were used to analyze DEF6 expression in ccRCC. Immunohistochemistry (IHC), western blotting and reverse transcription‑quantitative PCR were used to examine the DEF6 protein and mRNA expression levels in cell lines and clinical samples. Subsequently, the Kaplan‑Meier method and Cox regression analyses were used to determine the impact of DEF6 expression on the overall survival of patients alongside other clinical variables in both the TCGA database and the present clinical database. The results showed that both DEF6 mRNA and protein expression levels were upregulated in ccRCC compared to normal controls. The Kaplan‑Meier survival analysis showed that patients with high DEF6 expression had poor prognoses from both the TCGA database and the present clinical database. Univariate survival analysis and multivariate survival analysis revealed that DEF6 could be an independent prognostic factor for ccRCC. Additionally, bioinformatics analysis indicated that differentially expressed genes related to DEF6 expression influenced ccRCC by regulating the tumor immune microenvironment. In conclusion, overexpression of DEF6 is significantly correlated with a poor prognosis for patients with ccRCC and DEF6 may influence the biological processes involved with ccRCC by regulating the immune microenvironment.
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November-2020
Volume 44 Issue 5

Print ISSN: 1021-335X
Online ISSN:1791-2431

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Spandidos Publications style
Zhu ZP, Lin LR, Lv TD, Xu CR, Cai TY and Lin J: High expression levels of DEF6 predicts a poor prognosis for patients with clear cell renal cell carcinoma. Oncol Rep 44: 2056-2066, 2020
APA
Zhu, Z., Lin, L., Lv, T., Xu, C., Cai, T., & Lin, J. (2020). High expression levels of DEF6 predicts a poor prognosis for patients with clear cell renal cell carcinoma. Oncology Reports, 44, 2056-2066. https://doi.org/10.3892/or.2020.7736
MLA
Zhu, Z., Lin, L., Lv, T., Xu, C., Cai, T., Lin, J."High expression levels of DEF6 predicts a poor prognosis for patients with clear cell renal cell carcinoma". Oncology Reports 44.5 (2020): 2056-2066.
Chicago
Zhu, Z., Lin, L., Lv, T., Xu, C., Cai, T., Lin, J."High expression levels of DEF6 predicts a poor prognosis for patients with clear cell renal cell carcinoma". Oncology Reports 44, no. 5 (2020): 2056-2066. https://doi.org/10.3892/or.2020.7736