Inhibitory effect of microRNA‑455‑5p on biological functions of esophageal squamous cell carcinoma Eca109 cells via Rab31
- Authors:
- Published online on: October 2, 2018 https://doi.org/10.3892/etm.2018.6820
- Pages: 4959-4966
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Copyright: © Liu et al. This is an open access article distributed under the terms of Creative Commons Attribution License.
Abstract
Introduction
Esophageal carcinoma is a common malignant tumor of the digestive tract, mainly comprising squamous cell carcinoma and adenocarcinoma, that is typically associated with poor patient prognosis (1,2). In China, esophageal carcinoma is has a high incidence and is the fourth most common of all malignant tumors (3). In addition, 90% cases of esophageal carcinoma are squamous cell carcinoma (4). Although clinical diagnostic methods and treatments for esophageal squamous cell carcinoma (ESCC) have improved in recent years, the 5-year survival rate of patients with ESCC remains ~20% (5,6). Distant metastasis is the major cause of poor patient prognosis (7). It has been reported that the invasion and metastasis of tumor cells is a complex process comprising multiple genes, steps and stages, and the molecular mechanism that regulates this process is not clear (8). It is therefore important to understand the molecular mechanisms underlying the invasion and metastasis of ESCC and to identify novel genes involved.
MicroRNA (miRNA or miR) is a class of non-coding small RNA molecules (18–22 nucleotides) that regulate gene expression at the post-transcriptional level (9). miRNAs are associated with the regulation of tumor cell proliferation, invasion, metastasis, apoptosis and autophagy, as well as being important molecular targets for early diagnosis and treatment of cancer (10). It has been reported that the expression of a number of miRNAs in ESCC tissues and the peripheral blood is disordered; this may be of great value in clinical diagnosis and prognosis (11). For example, miR-506 expression is significantly elevated in the peripheral blood of patients with ESCC and is positively correlated with lymphatic metastasis, TNM staging and tumor size (12). Furthermore, the expression of miR-1297 in the peripheral blood of patients with ESCC is significantly reduced and can be used as a diagnostic marker (13). miR-613 is significantly downregulated in ESCC tissues and the peripheral blood, as well as being negatively correlated with lymphatic metastasis and TNM staging; Kaplan-Meier analysis has been used to demonstrate that low miR-613 expression is associated with poor patient prognosis (14). It has also been reported that miR-10b, miR-29c and miR-205 have good specificity and sensitivity as predictors of diagnosis or prognosis in ESCC (15). Together, these studies suggest that miRNAs may be valuable in the early diagnosis, clinical treatment and prognosis of ESCC.
miR-455 is a tumor-associated miRNA molecule whose gene is located at fragile site region on chromosome 9q32 (16,17). miR-455 is abnormally expressed in a number of tumors, including breast cancer, non-small cell lung cancer and gastric cancer (18). Mature miR-455 includes two subtypes; miR-455-3p and miR-455-5p (19). miR-455-3p is associated with tumor proliferation, invasion and metastasis; for example, miR-455-3p inhibits proliferation and induces apoptosis in colon cancer HCT116 cells (20). miR-455-3p promotes the invasion and metastasis of triple negative breast cancer cells by targeting EI24 (21). By contrast, there have been few studies into the effect of miR-455-5p in tumors and it is thought that its biological function is associated with the tumor tissue type (22). For example, miR-455-5p inhibits the proliferation and metastasis of gastric cancer by downregulating the expression of Rab18, acting as a tumor-suppressor gene (23). In oral squamous cell carcinoma, the transforming growth factor (TGF)-β-SMAD signaling pathway upregulates miR-455-5p expression and promotes tumor cell proliferation by targeting UBE2B (24). However, the expression and mechanism of action of miR-455-5p in ESCC remain unclear. Rab31 is a tumor-associated gene that has been reported in recent years (25). The expression of Rab31 is abnormal in a variety of tumor types and Rab31 serves a role in the proliferation, invasion and metastasis of tumor cells (26,27). Furthermore, the association between Rab31 and miR-455-5p in ESCC has not previously been reported, nor has the role of Rab31. The aim of the present study was to investigate the expression and underlying mechanisms of miR-455-5p and Rab31 in ESCC at the cellular and molecular levels.
Materials and methods
Patients
A total of 60 patients (36 males and 24 females) with ESCC who received radical or palliative resection of tumor tissues (ESCC group) and tumor-adjacent tissues (control group) at Tianjin Integrated Traditional Chinese and Western Medicine Hospital (Tianjin, China) between December 2014 and January 2016 were included in the present study. ESCC was diagnosed and classified by two pathologists according to the 2003 WHO cancer classification criteria (28). The resected tissues were stored at −80°C before use. The age range of the patients was 36–73 years and the mean age was 51±1.8 years. None of the patients received adjuvant therapy prior to the surgery. Patients with lymph node metastasis (29 cases) were included in the N1 subgroup, while those without lymph node metastasis (31 cases) were included in the N0 subgroup. According to the classification of differentiation degrees (29), 11 patients had poor differentiation, 28 patients had moderate differentiation and 21 patients had high differentiation. All procedures were approved by the Ethics Committee of Tianjin Nankai Hospital (Tianjin, China). Written informed consent was obtained from all patients or their families.
Cells
The ESCC cell line Eca109 was purchased from the Shanghai Institute of Cell Biology (Chinese Academy of Sciences, Shanghai, China). Cells were cultured in fresh RPMI-1640 medium supplemented with 10% fetal bovine serum (FBS) (both Thermo Fisher Scientific, Inc., Waltham, MA, USA) at 37°C in an atmosphere containing 5% CO2. The medium was replaced every two days and cells were passaged when they reached 80–90% confluence.
Eca109 cells were divided into the following groups: Negative control (NC), miR-455-5p mimics (5′-TAUGTGCCTTTGGACTACATCG-3′) and miR-455-5p inhibitor (5′-GCAGTCCATGGGCATATACAC-3′). When cells reached 70–90% confluence, 1.25 µl miR-455-5p mimics or miR-455-5p inhibitor (20 pmol/µl; Gangzhou RiboBio Co., Ltd., Guangzhou, China) and 2 µl Lipofectamine® 2000 (Thermo Fisher Scientific, Inc.) were added into two individual vials containing 50 µl Opti Mem medium (Thermo Fisher Scientific, Inc.), respectively, for 5 min. The contents of the vials were mixed together and left to stand for 15 min. The mixture was subsequently applied to the cells and incubated at 37°C for 6 h, following which the medium was replaced with RPMI-1640 supplemented with 10% FBS. Cells were cultured at 37°C in an atmosphere containing 5% CO2 for 48 h prior to use.
For rescue experiments, Eca109 cells (2×105) in the miR-NC, miR-455-5p mimics and inhibitor groups were seeded into 24-well plates (1×105/well) containing antibiotic-free RPMI-1640 medium supplemented with 10% FBS. When cells reached 60% confluence, Eca109 cells in the miR-455-5p mimics and inhibitor groups were transfected with 0.5 µg pcDNA-3.1-Rab31 or pcDNA-3.1-shR-Rab31 plasmids (Hanbio Biotechnology Co., Ltd., Shanghai, China) using Lipofectamine 2000 (Thermo Fisher Scientific, Inc.), respectively, while cells in the miR-NC group were transfected with 0.5 µg negative control (NC) plasmid. Cells were cultured at 37°C in an atmosphere containing 5% CO2 for 6 h, following which the medium was replaced with fresh RPMI-1640 containing 10% FBS and cultured for 48 h.
Reverse transcription-quantitative polymerase chain reaction (RT-qPCR)
ESCC and tumor-adjacent tissues (100 mg) were ground into powder using liquid nitrogen and mixed with 1 ml TRIzol (Thermo Fisher Scientific, Inc.) for lysis. Total RNA was subsequently extracted using the phenol chloroform method. The purity of RNA was determined using A260/A280 ultraviolet spectrophotometry (Nanodrop ND2000; Thermo Fisher Scientific, Inc., Pittsburgh, PA, USA). cDNA was obtained by RT using a PrimeScript RT Reagent Kit (Takara Bio, Inc., Otsu, Japan) and stored at −20°C. The qPCR reaction system comprised 10 µl qRT-PCR-Mix (miScript SYBR Green PCR Kit; Qiagen GmbH, Hilden, Germany), 0.5 µl upstream primer (5′-TATGTGCCTTTGGACTACATCG-3′), 0.5 µl downstream primer (universal primer provided with kit; cat. no. 218073; Qiagen GmbH), 2 µl cDNA and 7 µl ddH2O. Reference gene was U6 (forward, 5′-GCGCGTCGTGAAGCGTTC-3′; reverse, 5′-GTGCAGGGTCCGAGGT-3′). Thermocycling condition were as follows: Initial denaturation at 95°C for 10 min, followed by 40 cycles of denaturation at 95°C for 1 min and elongation at 60°C for 30 sec. The 2−ΔΔCq method (30) was used to calculate relative expression of target mRNA against U6. Each sample was tested in triplicate.
Cell Counting Kit (CCK)-8 assay
Sample cells were inoculated in 96-well plates at a density of 2,000 cells/well. At 0, 24, 48 and 72 h, 20 µl CCK-8 reagent (5 g/l; Beyotime Institute of Biotechnology, Haimen, China) was added at 37°C for 2 h. The absorbance (490 nm) of each well was measured and cell proliferation curves were plotted. Each group was tested in 3 replicate wells.
Transwell assay
Transwell chambers (8 µm diameter and 24 wells; Corning Inc., Corning, NY, USA) were used to evaluate the migration of Eca109 cells. Transfected cells were collected by trypsin digestion and resuspended at a density of 2×105 cells/ml in RPMI-1640 medium. The cell suspension (200 µl) was added into the upper chamber. A total of 500 µl RPMI-1640 medium supplemented with 10% FBS was added to the lower chamber. Following 24 h of incubation at 37°C, cells in the upper chamber were removed using a cotton swab. The chamber was subsequently fixed using 4% formaldehyde for 10 min at room temperature, subjected to Giemsa's staining at room temperature for 1 min and washed three times. Cells that had migrated to the lower chamber were counted under a microscope (5 fields; magnification, ×200) to evaluate migration ability.
Matrigel invasion chambers (BD Biosciences, Franklin Lakes, NJ, USA) were used to determine the invasion ability of cells. Matrigel (BD Biosciences, Franklin Lakes, NJ, USA) was first diluted with serum-free RPMI-1640 medium at a ratio of 1:2. In the upper chamber, 100 µl diluted Matrigel was added and incubated at 37°C for 1 h. A total of 500 µl RPMI-1640 medium supplemented with 10% FBS was added to the lower chamber. Following incubation at 37°C for 72 h, cells in the upper chamber were removed using a cotton swab. The chamber was subsequently fixed using 4% formaldehyde for 10 min at room temperature and then subjected to Giemsa's staining at room temperature for 1 min. Following three washes, 3 cells which had invaded the lower chamber were counted under a microscope (5 fields; magnification, ×200).
Western blotting
Cells in each group were trypsinized and collected. Cold radioimmunoprecipitation assay lysis buffer (600 µl; Beyotime Institute of Biotechnology) was mixed with the samples for 30 min on ice, following which samples were centrifuged at 10,000 × g and 4°C for 10 min. The protein concentration was determined using a bicinchoninic acid protein concentration determination kit (RTP7102; Realtimes Biotechnology Co., Ltd., Beijing, China). Protein samples (5 µl) were separated by 10% SDS-PAGE and electro-transferred to polyvinylidene difluoride membranes on ice. Membranes were blocked with 5% skimmed milk at room temperature for 1 h. Subsequently, membranes were incubated with rabbit anti-human Rab31 polyclonal primary antibody (1:1,000; BS70807) and rabbit anti-human GAPDH primary antibody (1:5,000; AP0063; both Bioworld Technology, Inc., St. Louis Park, MN, USA) at 4°C overnight. Membranes were washed with PBS with Tween 20 (PBST) and incubated with goat anti-mouse horseradish peroxidase-conjugated secondary antibodies (1:2,000; BS12478; Bioworld Technology, Inc.) at room temperature for 1 h. Membranes were washed five times with PBST for 5 min and developed using an enhanced chemiluminescence detection kit (Sigma-Aldrich; Merck KGaA, Darmstadt, Germany) for imaging. Image lab v3.0 software (Bio-Rad Laboratories, Inc., Hercules, CA, USA) was used to acquire and analyze imaging data. The relative expression of Rab31 protein was calculated with GAPDH as a control.
Dual luciferase reporter assay
To investigate the regulatory mechanism of Rab31, TargetScan (http://www.targetscan.org) was used to predict miRNA molecules that might regulate Rab31. It was demonstrated that miR-455-5p was a potential regulator of Rab31 expression. Wild-type (WT) and mutant seeding regions of miR-455-5p in the 3′-UTR of Rab31 were chemically synthesized, following which SpeI and HindIII restriction sites were added and cloned into pMIR-REPORT luciferase reporter plasmids (0.5 µg; Thermo Fisher Scientific, Inc.) with WT or mutant 3′-UTR DNA sequences. Plasmids were transfected together with miR-NC or miR-455-5p mimics into Eca109 cells as described earlier. Following incubation for 24 h, cells were processed using dual luciferase reporter assay kit according to the manufacturer's protocol (Promega Corp., Madison, WI, USA). The fluorescence intensity was measured using a GloMax 20/20 luminometer (Promega Corp.). Fluorescence values of each group of were measured using Renilla fluorescence activity as the internal reference.
Statistical analysis
All results were analyzed using SPSS 17.0 statistical software (SPSS, Inc., Chicago, IL, USA). Student's t test was used for comparisons between two groups. Multiple group comparisons were analyzed using one-way analysis of variance with least significant difference and Student-Newman-Keul's post hoc tests. For heterogeneous data, Tamhane's T2 or Dunnett's T3 post hoc tests were used. P<0.05 was considered to indicate a statistically significant difference.
Results
miR-455-5p expression is decreased in ESCC tissues and is negatively correlated with metastasis and development of the disease
To measure miR-455-5p expression in ESCC tissues, RT-qPCR was performed. The results demonstrated that miR-455-5p expression was significantly decreased in ESCC tissues compared with tumor-adjacent tissues (P<0.01; Fig. 1A). In addition, miR-455-5p expression in ESCC tissues from patients with lymphatic metastasis was significantly reduced compared with tissues from patients without lymphatic metastasis (P<0.01; Fig. 1B). miR-455-5p was also significantly downregulated in ESCC tissues from patients with poor differentiation compared with tissues from patients with high or moderate differentiation (P<0.05; Fig. 1C). These results suggest that miR-455-5p expression is decreased in ESCC tissues and is negatively correlated with metastasis and disease development.
miR-455-5p inhibits the proliferation of Eca109 cells
A CCK-8 assay was performed to assess proliferation. The results revealed that the absorbance of Eca109 cells t transfected with miR-455-5p mimics was significantly reduced compared with the miR-NC group at all time points (P<0.05), while the absorbance of Eca109 cells in the miR-455-5p inhibitor group was significantly increased compared with the miR-NC group (P<0.05; Fig. 2). These results indicate that miR-455-5p expression inhibits ESCC Eca109 cell proliferation.
miR-455-5p expression inhibits the migration and invasion abilities of Eca109 cells
A Transwell assay was used to investigate the migration and invasion abilities of Eca109 cells. The results revealed fewer cells in crossed the chamber membrane the miR-455-5p mimics group compared with the miR-NC group (P<0.05; Fig. 3). In contrast, the number of cells in the miR-455-5p inhibitor group that crossed the chamber membrane was significantly increased compared with the miR-NC group (P<0.05; Fig. 3). In the invasion assay, the number of cells that crossed the chamber membrane was lower in the miR-455-5p mimics group compared with the miR-NC group (P<0.05; Fig. 3). In the miR-455-5p inhibitor group, there was a significant increase in the number of invading cells compared with the miR-NC group (P<0.05; Fig. 3). These results suggest that miR-455-5p expression inhibits the migration and invasion abilities of Eca109 cells.
Rab31 expression is regulated by miR-455-5p in Eca109 cells
Western blotting was performed to assess Rab31 protein expression in Eca109 cells. The results revealed that Rab31 protein expression was significantly reduced in the miR-455-5p mimics group compared with the miR-NC group (P<0.05), while it was significantly increased in the miR-455-5p inhibitor group (P<0.05; Fig. 4). These results suggest that miR-455-5p regulates the expression of Rab31 protein in Eca109 cells.
Rab31 promotes the proliferation, migration and invasion of ESCC Eca109 cells
To assess how the regulation of Rab31 by miR-455-5p affects the biological functions of Eca109 cells, Rab31 protein was silenced or overexpressed. The results of a CCK-8 assay revealed that miR-455-5p-induced Rab31 downregulation significantly decreased the proliferation of Eca109 cells (P<0.05; Fig. 5A). However, co-transfection with pcDNA3.1-Rab31 (which reversed Rab31 downregulation) increased the proliferation of Eca109 cells to a level higher than the miR-NC group (P<0.05; Fig. 5A). Rab31 overexpression induced by the inhibition of miR-455-5p significantly promoted the proliferation of Eca109 cells (P<0.05), whereas Rab31 downregulation induced by co-transfection with pcDNA3.1-shR-Rab31 reduced the proliferation of Eca109 cells to a level similar to that observed in the miR-NC group (Fig. 5B). Transwell assay data revealed that cotransfection with pcDNA3.1-Rab31 increased the migration and invasion abilities of Eca109 cells to levels similar to those observed in the miR-NC group (P<0.05; Fig. 5C), whereas Rab31 downregulation induced by miR-455-5p overexpression reduced migration and invasion compared with the miR-NC group (P<0.05; Fig. 5D). Rab31 overexpression induced by miR-455-5p inhibition resulted in increased migration and invasion compared with the miR-NC group (P<0.05), whereas co-transfection with pcDNA3.1-shR-Rab31 (which downregulated Rab31 expression) reduced the migration and invasion abilities of Eca109 cells to levels similar to the miR-NC group (Fig. 5D). The results indicate that Rab31 promotes the proliferation, migration and invasion of ESCC Eca109 cells.
miR-455-5p binds with the 3′-UTR seeding region of Rab31 mRNA to regulate its expression
To investigate the interaction between miR-455-5p and the 3′-UTR of Rab31 mRNA, a dual luciferase reporter assay was performed. The fluorescence value of cells co-transfected with miR-455-5p mimics and pMIR-REPORT-WT luciferase reporter plasmids was significantly lower compared with the NC group (P<0.05; Fig. 6). In contrast, no significant difference was observed in the fluorescence of cells co-transfected with miR-455-5p mimics and pMIR-REPORT-mutant luciferase reporter plasmids compared with the NC group (Fig. 6). These results indicate that miR-455-5p is able to bind with the 3′-UTR seeding region of Rab31 mRNA to regulate its expression.
Discussion
The initiation and development of ESCC is a complex process that involves multiple genes, phases and steps. It is associated with gene mutation, abnormal expression, epigenetic inheritance and tumor stem cells (31,32). As an important post-transcriptional regulator, miRNAs serve important roles in the occurrence and development of tumors (33). It has been reported that the miRNA expression profile is significantly altered in ESCC tissues and that various miRNA molecules act as oncogenes or tumor-suppressor genes in ESCC (34,35). In the present study it was revealed that miR-455-5p expression is downregulated in ESCC tissues and is negatively correlated with lymphatic metastasis and differentiation. In vitro experiments were used to demonstrate that miR-455-5p inhibits the proliferation, migration and invasion of ESCC cells. The results of bioinformatics and molecular biology studies indicate that miR-455-5p inhibits the proliferation, migration and invasion of ESCC cells by directly regulating the expression of Rab31. These results suggest that miR-455-5p downregulation promotes the occurrence and development of ESCC.
The miR-455 family includes two members, miR-455-5p and miR-455-3p, both of which participate in the proliferation, migration and invasion of several types of tumor cells (36). For example, miR-455-5p expression is downregulated in gastric cancer tissues and cells and miR-455-5p overexpression inhibits the proliferation and migration of gastric cancer cells by targeting Rab18, acting as a tumor-suppressor (23). In addition, miR-455-5p inhibits the proliferation and promotes the apoptosis of HCT116 colon cancer cells (20). The biological functions of miR-455 vary with tumor type and it may serve as an oncogene in some tumors. Li et al (21) reported that miR-455-3p promotes the proliferation and metastasis of triple-negative breast cancer by targeting EI24 gene expression. In oral squamous cell carcinoma, the TGF-β/Smad signaling pathway upregulates miR-455-5p and promotes the proliferation, migration and invasion of tumor cells (24). The results of the present study demonstrate that miR-455-5p is significantly downregulated in ESCC tissues and is negative correlated with lymphatic metastasis and differentiation, suggesting that miR-455-5p may be an oncogene for ESCC. Transfection with miR-455-5p mimics inhibits the proliferation of Eca109 cells, whereas transfection with miR-455-5p inhibitor promotes proliferation. Transwell results revealed that the number of migrated and invading cells in the miR-455-5p mimics group was significantly lower compared with the NC, whereas invasion and migration were increased in the miR-455-5p inhibitor group. This suggests that miR-455-5p inhibits the migration and invasion of ESCC cells.
miRNA molecules exert their biological functions mainly by inhibiting the expression of target genes. Bioinformatics used in the present study suggest that Rab31 is a potential target gene of miR-455-5p. Western blotting data revealed that Rab31 was downregulated in the miR-455-5p mimics group, whereas it is upregulated in the miR-455-5p inhibitor group, suggesting that miR-455-5p may exert its effect by regulating the expression of Rab31. Rab31 belongs to the Rab protein family and serves important regulatory roles in vesicle transport in cells (26). It has been reported that Rab31 is important for the apoptosis, proliferation and metastasis of tumors (26). For example, Rab31 inhibits apoptosis and promotes proliferation in hepatoma carcinoma cells by regulating the phosphoinositide 3-kinase/protein kinase B/B-cell lymphoma 2 (Bcl-2)/Bcl-2-associated X protein signaling pathway (27). Grismayer et al (37) reported that Rab31 is associated with the regulation of chemoresistance in breast cancer cells and affects the prognosis of patients (37). The results of the present study demonstrate that Rab31 overexpression in cells transfected with miR-455-5p mimics inhibits ESCC cell proliferation, while Rab31 downregulation in cells transfected with miR-455-5p inhibitor increases it. Transwell results revealed that Rab31 upregulation in the miR-455-5p mimics group facilitated the regulatory effect of miR-455-5p on ESCC cells, while Rab31 downregulation in the miR-455-5p inhibitor reduced the regulatory effect of miR-455-5p. Dual luciferase reporter assay results demonstrated that miR-455-5p directly binds with the 3′-UTR of Rab31 mRNA, suggesting that Rab31 is a direct target gene of miR-455-5p. However, the present study is not without limitations. The function of miR-455-5p in ESCC was not investigated in vivo and the mechanism by which Rab31 regulates ESCC development remains to be elucidated. In conclusion, the present study demonstrates that miR-455-5p inhibits the proliferation, migration and invasion of ESCC cells by directly regulating the expression of Rab31. miR-455-5p downregulation is an important factor that contributes to the occurrence and development of ESCC.
Acknowledgements
Not applicable.
Funding
No funding was received.
Availability of data and materials
The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
Authors' contributions
YL and YT collaborated to design the study. YL and PL were responsible for experiments. YL and YT analyzed the data. All authors collaborated to interpret results and develop the manuscript. The final version of the manuscript has been read and approved by all authors, and each author believes that the manuscript represents honest work.
Ethics approval and consent to participate
All procedures performed in the current study were approved by the Ethics Committee of Tianjin Integrated Traditional Chinese and Western Medicine Hospital (Tianjin, China). Written informed consent was obtained from all patients or their families.
Patient consent for publication
Not applicable.
Competing interests
The authors declare that they have no competing interests.
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