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Article

A panel of 7 prognosis-related long non-coding RNAs to improve platinum-based chemoresistance prediction in ovarian cancer

  • Authors:
    • Jing Song
    • Wanfeng Zhang
    • Sen Wang
    • Kun Liu
    • Fangzhou Song
    • Longke Ran
  • View Affiliations / Copyright

    Affiliations: Department of Bioinformatics, The Basic Medical School of Chongqing Medical University, Chongqing 400016, P.R. China, Molecular and Tumor Research Center, Chongqing Medical University, Chongqing 400016, P.R. China
    Copyright: © Song et al. This is an open access article distributed under the terms of Creative Commons Attribution License.
  • Pages: 866-876
    |
    Published online on: May 11, 2018
       https://doi.org/10.3892/ijo.2018.4403
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Abstract

In order to study the role of long non-coding RNAs (lncRNAs) in predicting platinum-based chemoresistance in patients with high-grade serous ovarian carcinoma (HGS-OvCa), a=7-lncRNA signature was developed by analyzing 561 microarrays and 136 specimens from RNA-sequencing (RNA-seq) obtained from online databases [odds ratio (OR), 2.859; P<0.0001]. The upregulated lncRNAs (RP11-126K1.6, ZBED3-AS1, RP11-439E19.10 and RP11‑348N5.7) and downregulated lncRNAs [RNF144A-AS1, growth arrest specific 5 (GAS5) and F11-AS1] exhibited high sensitivity and specificity in predicting chemoresistance in the Gene Expression Omnibus and the Cancer Genome Atlas (area under curve >0.8). The lncRNA signature was independent of clinical characteristics and 4 HGS-OvCa molecular subtypes. This signature was negatively associated with disease-free survival (n=47; log-rank, P<0.01). Furthermore, the expression of the 7 lncRNAs was consistent with microarray (GSE63885, GSE51373, GSE15372 and GSE9891) and RNA-seq data. In in vitro experiments, ZBED3-AS1, F11-AS1 and GAS5 were differentially expressed in cell lines that are known to be resistant and non-resistant to platinum-based drugs, which was consistent with the results in the present study. This lncRNA signature may be used as a prognostic marker for predicting resistance to platinum-based chemotherapeutics in HGS-OvCa. These findings may contribute to individualized therapies in patients with HGS-OvCa in the future.
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Copy and paste a formatted citation
Spandidos Publications style
Song J, Zhang W, Wang S, Liu K, Song F and Ran L: A panel of 7 prognosis-related long non-coding RNAs to improve platinum-based chemoresistance prediction in ovarian cancer. Int J Oncol 53: 866-876, 2018.
APA
Song, J., Zhang, W., Wang, S., Liu, K., Song, F., & Ran, L. (2018). A panel of 7 prognosis-related long non-coding RNAs to improve platinum-based chemoresistance prediction in ovarian cancer. International Journal of Oncology, 53, 866-876. https://doi.org/10.3892/ijo.2018.4403
MLA
Song, J., Zhang, W., Wang, S., Liu, K., Song, F., Ran, L."A panel of 7 prognosis-related long non-coding RNAs to improve platinum-based chemoresistance prediction in ovarian cancer". International Journal of Oncology 53.2 (2018): 866-876.
Chicago
Song, J., Zhang, W., Wang, S., Liu, K., Song, F., Ran, L."A panel of 7 prognosis-related long non-coding RNAs to improve platinum-based chemoresistance prediction in ovarian cancer". International Journal of Oncology 53, no. 2 (2018): 866-876. https://doi.org/10.3892/ijo.2018.4403
Copy and paste a formatted citation
x
Spandidos Publications style
Song J, Zhang W, Wang S, Liu K, Song F and Ran L: A panel of 7 prognosis-related long non-coding RNAs to improve platinum-based chemoresistance prediction in ovarian cancer. Int J Oncol 53: 866-876, 2018.
APA
Song, J., Zhang, W., Wang, S., Liu, K., Song, F., & Ran, L. (2018). A panel of 7 prognosis-related long non-coding RNAs to improve platinum-based chemoresistance prediction in ovarian cancer. International Journal of Oncology, 53, 866-876. https://doi.org/10.3892/ijo.2018.4403
MLA
Song, J., Zhang, W., Wang, S., Liu, K., Song, F., Ran, L."A panel of 7 prognosis-related long non-coding RNAs to improve platinum-based chemoresistance prediction in ovarian cancer". International Journal of Oncology 53.2 (2018): 866-876.
Chicago
Song, J., Zhang, W., Wang, S., Liu, K., Song, F., Ran, L."A panel of 7 prognosis-related long non-coding RNAs to improve platinum-based chemoresistance prediction in ovarian cancer". International Journal of Oncology 53, no. 2 (2018): 866-876. https://doi.org/10.3892/ijo.2018.4403
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