1
|
Ferlay J, Soerjomataram I, Dikshit R, Eser
S, Mathers C, Rebelo M, Parkin DM, Forman D and Bray F: Cancer
incidence and mortality worldwide: Sources, methods and major
patterns in GLOBOCAN 2012. Int J Cancer. 136:E359–E386. 2015.
View Article : Google Scholar : PubMed/NCBI
|
2
|
Siegel RL, Miller KD and Jemal A: Cancer
statistics, 2018. CA Cancer J Clin. 68:7–30. 2018. View Article : Google Scholar : PubMed/NCBI
|
3
|
Howlader N, Noone A, Krapcho M, Miller D,
Bishop K, Altekruse S, Kosary C, Yu M, Ruhl J and Tatalovich Z:
SEER cancer statistics review. 1975-2013, National Cancer
Institute; Bethesda, MD: https://seer.cancer.gov/archive/csr/1975_2013April.
2016
|
4
|
Herszenyi L and Tulassay Z: Epidemiology
of gastrointestinal and liver tumors. Eur Rev Med Pharmacol Sci.
14:249–258. 2010.PubMed/NCBI
|
5
|
Lollini PL, De Giovanni C, Nicoletti G, Di
Carlo E, Musiani P, Nanni P and Forni G: Immunoprevention of
colorectal cancer: A future possibility? Gastroenterol Clin North
Am. 31:1001–1014. 2002. View Article : Google Scholar : PubMed/NCBI
|
6
|
Marmol I, Sanchez-de-Diego C, Pradilla
Dieste A, Cerrada E and Rodriguez Yoldi MJ: Colorectal carcinoma: A
general overview and future perspectives in colorectal cancer. Int
J Mol Sci. 18:E1972017. View Article : Google Scholar : PubMed/NCBI
|
7
|
Ashktorab H, Daremipouran M, Goel A, Varma
S, Leavitt R, Sun X and Brim H: DNA methylome profiling identifies
novel methylated genes in African American patients with colorectal
neoplasia. Epigenetics. 9:503–512. 2014. View Article : Google Scholar : PubMed/NCBI
|
8
|
Ashktorab H, Rahi H, Wansley D, Varma S,
Shokrani B, Lee E, Daremipouran M, Laiyemo A, Goel A, Carethers JM
and Brim H: Toward a comprehensive and systematic methylome
signature in colorectal cancers. Epigenetics. 8:807–815. 2013.
View Article : Google Scholar : PubMed/NCBI
|
9
|
Pulford DJ, Falls JG, Killian JK and
Jirtle RL: Polymorphisms, genomic imprinting and cancer
susceptibility. Mutat Res. 436:59–67. 1999. View Article : Google Scholar : PubMed/NCBI
|
10
|
Hatziapostolou M and Iliopoulos D:
Epigenetic aberrations during oncogenesis. Cell Mol Life Sci.
68:1681–1702. 2011. View Article : Google Scholar : PubMed/NCBI
|
11
|
Schwanhausser B, Busse D, Li N, Dittmar G,
Schuchhardt J, Wolf J, Chen W and Selbach M: Global quantification
of mammalian gene expression control. Nature. 473:337–342. 2011.
View Article : Google Scholar : PubMed/NCBI
|
12
|
Anastasiadou E, Jacob LS and Slack FJ:
Non-coding RNA networks in cancer. Nat Rev Cancer. 18:5–18. 2018.
View Article : Google Scholar : PubMed/NCBI
|
13
|
Taft RJ, Pang KC, Mercer TR, Dinger M and
Mattick JS: Non-coding RNAs: Regulators of disease. J Pathol.
220:126–139. 2010. View Article : Google Scholar : PubMed/NCBI
|
14
|
Hayes J, Peruzzi PP and Lawler S:
MicroRNAs in cancer: Biomarkers, functions and therapy. Trends Mol
Med. 20:460–469. 2014. View Article : Google Scholar : PubMed/NCBI
|
15
|
De Smet EG, Mestdagh P, Vandesompele J,
Brusselle GG and Bracke KR: Non-coding RNAs in the pathogenesis of
COPD. Thorax. 70:782–791. 2015. View Article : Google Scholar : PubMed/NCBI
|
16
|
Goodrich JA and Kugel JF: From bacteria to
humans, chromatin to elongation, and activation to repression: The
expanding roles of noncoding RNAs in regulating transcription. Crit
Rev Biochem Mol Biol. 44:3–15. 2009. View Article : Google Scholar : PubMed/NCBI
|
17
|
Aravin A, Gaidatzis D, Pfeffer S,
Lagos-Quintana M, Landgraf P, Iovino N, Morris P, Brownstein MJ,
Kuramochi-Miyagawa S, Nakano T, et al: A novel class of small RNAs
bind to MILI protein in mouse testes. Nature. 442:203–207. 2006.
View Article : Google Scholar : PubMed/NCBI
|
18
|
Girard A, Sachidanandam R, Hannon GJ and
Carmell MA: A germline-specific class of small RNAs binds mammalian
Piwi proteins. Nature. 442:199–202. 2006. View Article : Google Scholar : PubMed/NCBI
|
19
|
Aravin AA, Sachidanandam R, Bourc'his D,
Schaefer C, Pezic D, Toth KF, Bestor T and Hannon GJ: A piRNA
pathway primed by individual transposons is linked to de novo DNA
methylation in mice. Mol Cell. 31:785–799. 2008. View Article : Google Scholar : PubMed/NCBI
|
20
|
Aravin AA and Bourc'his D: Small RNA
guides for de novo DNA methylation in mammalian germ cells. Genes
Dev. 22:970–975. 2008. View Article : Google Scholar : PubMed/NCBI
|
21
|
Esposito T, Magliocca S, Formicola D and
Gianfrancesco F: piR_015520 belongs to Piwi-associated RNAs
regulates expression of the human melatonin receptor 1A gene. PLoS
One. 6:e227272011. View Article : Google Scholar : PubMed/NCBI
|
22
|
Vella S, Gallo A, Lo Nigro A, Galvagno D,
Raffa GM, Pilato M and Conaldi PG: PIWI-interacting RNA (piRNA)
signatures in human cardiac progenitor cells. Int J Biochem Cell
Biol. 76:1–11. 2016. View Article : Google Scholar : PubMed/NCBI
|
23
|
Law PT, Qin H, Ching AK, Lai KP, Co NN, He
M, Lung RW, Chan AW, Chan TF and Wong N: Deep sequencing of small
RNA transcriptome reveals novel non-coding RNAs in hepatocellular
carcinoma. J Hepatol. 58:1165–1173. 2013. View Article : Google Scholar : PubMed/NCBI
|
24
|
Cheng J, Guo JM, Xiao BX, Miao Y, Jiang Z,
Zhou H and Li QN: piRNA, the new non-coding RNA, is aberrantly
expressed in human cancer cells. Clin Chim Acta. 412:1621–1625.
2011. View Article : Google Scholar : PubMed/NCBI
|
25
|
Cheng J, Deng H, Xiao B, Zhou H, Zhou F,
Shen Z and Guo J: piR-823, a novel non-coding small RNA,
demonstrates in vitro and in vivo tumor suppressive activity in
human gastric cancer cells. Cancer Lett. 315:12–17. 2012.
View Article : Google Scholar : PubMed/NCBI
|
26
|
Hashim A, Rizzo F, Marchese G, Ravo M,
Tarallo R, Nassa G, Giurato G, Santamaria G, Cordella A, Cantarella
C and Weisz A: RNA sequencing identifies specific PIWI-interacting
small non-coding RNA expression patterns in breast cancer.
Oncotarget. 5:9901–9910. 2014. View Article : Google Scholar : PubMed/NCBI
|
27
|
Peng L, Song L, Liu C, Lv X, Li X, Jie J,
Zhao D and Li D: piR-55490 inhibits the growth of lung carcinoma by
suppressing mTOR signaling. Tumour Biol. 37:2749–2756. 2016.
View Article : Google Scholar : PubMed/NCBI
|
28
|
Yan H, Wu QL, Sun CY, Ai LS, Deng J, Zhang
L, Chen L, Chu ZB, Tang B, Wang K, et al: piRNA-823 contributes to
tumorigenesis by regulating de novo DNA methylation and
angiogenesis in multiple myeloma. Leukemia. 29:196–206. 2015.
View Article : Google Scholar : PubMed/NCBI
|
29
|
Chu H, Hui G, Yuan L, Shi D, Wang Y, Du M,
Zhong D, Ma L, Tong N, Qin C, et al: Identification of novel piRNAs
in bladder cancer. Cancer Lett. 356:561–567. 2015. View Article : Google Scholar : PubMed/NCBI
|
30
|
Mei Y, Wang Y, Kumari P, Shetty AC, Clark
D, Gable T, MacKerell AD, Ma MZ, Weber DJ, Yang AJ, et al: A
piRNA-like small RNA interacts with and modulates p-ERM proteins in
human somatic cells. Nat Commun. 6:73162015. View Article : Google Scholar : PubMed/NCBI
|
31
|
Langmead B, Trapnell C, Pop M and Salzberg
SL: Ultrafast and memory-efficient alignment of short DNA sequences
to the human genome. Genome Biol. 10:R252009. View Article : Google Scholar : PubMed/NCBI
|
32
|
Livak KJ and Schmittgen TD: Analysis of
relative gene expression data using real-time quantitative PCR and
the 2(-Delta Delta C(T)) method. Methods. 25:402–408. 2001.
View Article : Google Scholar : PubMed/NCBI
|
33
|
Edge SB and Compton CC: The American Joint
Committee on Cancer: The 7th edition of the AJCC cancer staging
manual and the future of TNM. Ann Surg Oncol. 17:1471–1474. 2010.
View Article : Google Scholar : PubMed/NCBI
|
34
|
Williams Z, Morozov P, Mihailovic A, Lin
C, Puvvula PK, Juranek S, Rosenwaks Z and Tuschl T: Discovery and
characterization of piRNAs in the human fetal ovary. Cell Rep.
13:854–863. 2015. View Article : Google Scholar : PubMed/NCBI
|
35
|
Kaikkonen MU, Lam MT and Glass CK:
Non-coding RNAs as regulators of gene expression and epigenetics.
Cardiovasc Res. 90:430–440. 2011. View Article : Google Scholar : PubMed/NCBI
|
36
|
Sun Y, Koo S, White N, Peralta E, Esau C,
Dean NM and Perera RJ: Development of a micro-array to detect human
and mouse microRNAs and characterization of expression in human
organs. Nucleic Acids Res. 32:e1882004. View Article : Google Scholar : PubMed/NCBI
|
37
|
Sasaki YT, Sano M, Ideue T, Kin T, Asai K
and Hirose T: Identification and characterization of human
non-coding RNAs with tissue-specific expression. Biochem Biophys
Res Commun. 357:991–996. 2007. View Article : Google Scholar : PubMed/NCBI
|
38
|
de Almeida RA, Fraczek MG, Parker S,
Delneri D and O'Keefe RT: Non-coding RNAs and disease: The
classical ncRNAs make a comeback. Biochem Soc Trans. 44:1073–1078.
2016. View Article : Google Scholar : PubMed/NCBI
|
39
|
Mestdagh P, Vandesompele J, Brusselle G
and Vermaelen K: Non-coding RNAs and respiratory disease. Thorax.
70:388–390. 2015. View Article : Google Scholar : PubMed/NCBI
|
40
|
Esteller M: Non-coding RNAs in human
disease. Nat Rev Genet. 12:861–874. 2011. View Article : Google Scholar : PubMed/NCBI
|
41
|
Di Leva G, Garofalo M and Croce CM:
MicroRNAs in cancer. Annu Rev Pathol. 9:287–314. 2014. View Article : Google Scholar : PubMed/NCBI
|
42
|
Zhang H, Chen Z, Wang X, Huang Z, He Z and
Chen Y: Long non-coding RNA: A new player in cancer. J Hematol
Oncol. 6:372013. View Article : Google Scholar : PubMed/NCBI
|
43
|
Ma Y, Yang Y, Wang F, Moyer MP, Wei Q,
Zhang P, Yang Z, Liu W, Zhang H, Chen N, et al: Long non-coding RNA
CCAL regulates colorectal cancer progression by activating
Wnt/β-catenin signalling pathway via suppression of activator
protein 2α. Gut. 65:1494–1504. 2016. View Article : Google Scholar : PubMed/NCBI
|
44
|
Yin Y, Zhang B, Wang W, Fei B, Quan C,
Zhang J, Song M, Bian Z, Wang Q, Ni S, et al: miR-204-5p inhibits
proliferation and invasion and enhances chemotherapeutic
sensitivity of colorectal cancer cells by downregulating RAB22A.
Clin Cancer Res. 20:6187–6199. 2014. View Article : Google Scholar : PubMed/NCBI
|
45
|
Huang G, Hu H, Xue X, Shen S, Gao E, Guo
G, Shen X and Zhang X: Altered expression of piRNAs and their
relation with clinicopathologic features of breast cancer. Clin
Transl Oncol. 15:563–568. 2013. View Article : Google Scholar : PubMed/NCBI
|
46
|
Wang H, Zhao Y, Chen M and Cui J:
Identification of novel long non-coding and circular RNAs in human
papillomavirus- mediated cervical cancer. Front Microbiol.
8:17202017. View Article : Google Scholar : PubMed/NCBI
|
47
|
Zhang Z, Song N, Wang Y, Zhong J, Gu T,
Yang L, Shen X, Li Y, Yang X, Liu X, et al: Analysis of
differentially expressed circular RNAs for the identification of a
coexpression RNA network and signature in colorectal cancer. J Cell
Biochem. 120:6409–6419. 2018. View Article : Google Scholar : PubMed/NCBI
|
48
|
Chen Z, Li J, Tian L, Zhou C, Gao Y, Zhou
F, Shi S, Feng X, Sun N, Yao R, et al: MiRNA expression profile
reveals a prognostic signature for esophageal squamous cell
carcinoma. Cancer Lett. 350:34–42. 2014. View Article : Google Scholar : PubMed/NCBI
|
49
|
Su X, Malouf GG, Chen Y, Zhang J, Yao H,
Valero V, Weinstein JN, Spano JP, Meric-Bernstam F, Khayat D and
Esteva FJ: Comprehensive analysis of long non-coding RNAs in human
breast cancer clinical subtypes. Oncotarget. 5:9864–9876. 2014.
View Article : Google Scholar : PubMed/NCBI
|
50
|
Yang Q, Hua J, Wang L, Xu B, Zhang H, Ye
N, Zhang Z, Yu D, Cooke HJ, Zhang Y and Shi Q: MicroRNA and piRNA
profiles in normal human testis detected by next generation
sequencing. PLoS One. 8:e668092013. View Article : Google Scholar : PubMed/NCBI
|
51
|
Thomson T and Lin H: The biogenesis and
function of PIWI proteins and piRNAs: Progress and prospect. Annu
Rev Cell Dev Biol. 25:355–376. 2009. View Article : Google Scholar : PubMed/NCBI
|
52
|
Ng KW, Anderson C, Marshall EA, Minatel
BC, Enfield KS, Saprunoff HL, Lam WL and Martinez VD:
Piwi-interacting RNAs in cancer: Emerging functions and clinical
utility. Mol Cancer. 15:52016. View Article : Google Scholar : PubMed/NCBI
|
53
|
Derrien T, Johnson R, Bussotti G, Tanzer
A, Djebali S, Tilgner H, Guernec G, Martin D, Merkel A, Knowles DG,
et al: The GENCODE v7 catalog of human long noncoding RNAs:
Analysis of their gene structure, evolution, and expression. Genome
Res. 22:1775–1789. 2012. View Article : Google Scholar : PubMed/NCBI
|
54
|
Dick JE: Stem cell concepts renew cancer
research. Blood. 112:4793–4807. 2008. View Article : Google Scholar : PubMed/NCBI
|
55
|
Liu X, Sun Y, Guo J, Ma H, Li J, Dong B,
Jin G, Zhang J, Wu J, Meng L and Shou C: Expression of hiwi gene in
human gastric cancer was associated with proliferation of cancer
cells. Int J Cancer. 118:1922–1929. 2006. View Article : Google Scholar : PubMed/NCBI
|
56
|
He W, Wang Z, Wang Q, Fan Q, Shou C, Wang
J, Giercksky KE, Nesland JM and Suo Z: Expression of HIWI in human
esophageal squamous cell carcinoma is significantly associated with
poorer prognosis. BMC Cancer. 9:4262009. View Article : Google Scholar : PubMed/NCBI
|
57
|
Jiang J, Zhang H, Tang Q, Hao B and Shi R:
Expression of HIWI in human hepatocellular carcinoma. Cell Biochem
Biophys. 61:53–58. 2011. View Article : Google Scholar : PubMed/NCBI
|
58
|
Qiao D, Zeeman AM, Deng W, Looijenga LH
and Lin H: Molecular characterization of hiwi, a human member of
the piwi gene family whose overexpression is correlated to
seminomas. Oncogene. 21:3988–3999. 2002. View Article : Google Scholar : PubMed/NCBI
|
59
|
Hassiotou F and Geddes D: Anatomy of the
human mammary gland: Current status of knowledge. Clin Anat.
26:29–48. 2013. View Article : Google Scholar : PubMed/NCBI
|
60
|
Gisina AM, Lupatov AY, Karalkin PA,
Mainovskaya OA, Petrov LO, Sidorov DV, Yarygin VN and Yarygin KN:
Detection of minor subpopulations of colorectal adenocarcinoma
cells expressing cancer stem cell markers. Bull Exp Biol Med.
151:234–238. 2011. View Article : Google Scholar : PubMed/NCBI
|